Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0015941

Physical Location & Seq

Genomic Coordinates Forward (+)

3706167 .. 3708143

Gene Structure 1977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG047400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGAAATGCATGAAGATGGGCTGTTTCCGGATAATTTTGTGGTTCCGAATGTGCTCAAGGCTTGCGGGGCGATGGAGTGGATTGGAGTTGGGAAAGCAGTTCATGGATATGTGGTCAAGATGGGTTGTAATGGGTGTGTGTTTGTTGCTAGCAGTCTTGTAGATATGTATGGAAAATGTGGGGTTGTCGATGATGCGAGGAACGCGTTTGATGAAATGGTTGGGAGAAATGTGATCACATGGAATTCGATGCTGGTGGGTTATGTGCAAAATGGATTGAATGAGGATGCTATCAAGGTGTTTTGTGATATGAGGGAGGAAGGCCTTGAACCTACTCATGTGACCGTGTCTAGCTTTCTTTCGGCTTCGGCTAATTTAGGTGCGCTAGAAGAAGGTAAGCAAGCGCATGCATTAGCAGTTGTGAGTGGACTTGAACTGAATACCATTTTGGGGAGTTCTATTATAAACTTTTATTCCAAGGTTGGTTTGATTGAGGATGCTGAAATAGTTTTTAGAAGGATGAATGAGAAAGATGTGGTTACATGGAATTTGCTCATATCTGGGTATTTGCAAATTGGGGATGTTGATAAAGGTCTTGATATGTGCCGCTTAATGAGACTAGAAACCTTGAGGTTTGACTCGGTGACTCTTGCATCCCTTATGTCTGCTTTTGCAGATACACGAAATTTGAAATTTGGCAAGGAGGCGCACTGTTATTGCATAAGGAACAACCTTGAGGGTGATGTGGTTGTTGCAAGTAGTATAGTAGACCTGTATGCCAAATGTGAGAAAATTGATTACGCAAGACGAGCTTTCGAATCTGCAACAACTGGAGATCTTGTACTGTGGAACACGCTGTTGGCGGCTTATGCAGGATTGGGACATAGTGGTGAGGCATTGAAATTGTTCTATCAGATGCAACTGGAAAGTGTGCCTCCAAATGTGATGACTTGGAACTCTCTGATATTTGGTTTTTTGAAAAATGGTCAGGTCCATGAGGCTCAAGATATGTTCTTGCAGATGCAGTCCCTTGGTGTCGAGCCAAACCTGGTCACTTGGACTACTATGATCTCTGGTCTGGCGGAGAATGGGTTTGGCCATGATGCAATTCAGGCCTTCCATCGGATGCAAGAAGCGGGAATCAAACCCAATGTTGTGAGTATCATTTGTGTACTTAAGGCTTGCATAGAAATGGCATCATTACAGAATGGAAGAGTTATACATGGGTATTTGATTAGGCATTCCCTCTACCTTTCAGTACCAATTGCAACATCTTTAGTGGATATGTATGCTAAATGTGGTAATGTAGACGAAGCAAAGAGAGTGTTTGATATGGTGTCAGACAAGGAGTTACCTATCTATAATGCAATGATCTCCAGTTACGCATTACATGGTCAAGCTGTGGAAGCTCTTGCACTATACCAGAGTTTAAAGGAAGAAGGCTTACAACCCGACAGTGTAACCTTTACTAATGCCTTATATGCATGTAGCCATGCCAGTCTGGTGACTGAAGGTTTGGAGCTTTTGGATGACTTGTTATCCAATCAAACTATAAATCCAAGTATTGAGCACTATGGTTGTGTGGTTAATCTTCTTTCTCGCTGTGGCAATGTGGATGAAGCTTTTAGGCTTATCGTCGCGATGCCTTATGAGCCTGATGCGCAGATATTGGGATCATTACTTGCAGCTTGTGGAGAACAGAATAACATAGAACTAGAGGAGTATTTGTCCGATCAATTACTGAAATTAGAGCCAGAGAATTCTGGAAACTATGTAGCGATTTCAAATGCATATGCAGTTGCAGGAAGATGGGACGAGGTAAAGAAAGTGAGGCAGTTAATGAAAGAAAAGGGCCTGAGAAAGATTCCTGGATGCAGCTGGATTCAAATTGGAGAAGAAATCCATGCGTTTGTTGCTGGTGACAAATCACACCCAGAAACTGAGCAAATCTATTTGACATTGGAATTGTTGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

658

Amino Acids

72.51

Weight (kDa)

4.85

Isoelectric Point (pI)

33.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	76 - 123	4.4e-12	PPR repeat family
PPR_3	PF13812	77 - 122	2.1e-06	Pentatricopeptide repeat domain
PPR	PF01535	79 - 109	6.8e-08	PPR repeat
PPR_2	PF13041	177 - 225	4.4e-07	PPR repeat family
PPR_2	PF13041	279 - 322	1.4e-08	PPR repeat family
PPR_1	PF12854	311 - 341	4.3e-07	PPR repeat
PPR_2	PF13041	313 - 361	8.5e-16	PPR repeat family
PPR	PF01535	317 - 346	3.9e-07	PPR repeat
PPR_3	PF13812	340 - 395	2.9e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	345 - 376	1.4e-06	PPR repeat
PPR_2	PF13041	348 - 395	4.6e-10	PPR repeat family
PPR	PF01535	351 - 381	8.3e-07	PPR repeat
PPR_2	PF13041	453 - 497	3e-08	PPR repeat family
E_motif	PF20431	568 - 629	3.4e-23	E motif
Eplus_motif	PF20430	634 - 654	1.2e-06	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55740
fragaria_vesca	FvH4_1g04140
malus_domestica	MD02G1039900.v1.1
prunus_persica	Prupe.7G235800_v2.0.a1
pyrus_communis	pycom02g03320
rosa_chinensis	RchiOBHm_Chr2g0089611
rosa_laevigata	RLG00000016045
rosa_multiflora	Rmu_sc0004662.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151710
rosa_rugosa	Rorug02G0002100
rosa_samantha	Rh2AG047400 Rh2BG046100 Rh2CG048000 Rh2DG047500
rosa_wichuraiana	Rw2G003950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	464
Acc16I	TGCGCA	1 cut(s)	1662
AccI	GTMKAC	2 cut(s)	768, 1308
AccII	CGCG	2 cut(s)	206, 1640
AccIII	TCCGGA	1 cut(s)	28
AciI	CCGC	5 cut(s)	66, 607, 863, 1082, 1136
AclWI	GGATC	1 cut(s)	1681
AcoI	YGGCCR	1 cut(s)	1096
AcsI	RAATTY	5 cut(s)	244, 547, 685, 692, 1759
AcuI	CTGAAG	1 cut(s)	1530
AfaI	GTAC	3 cut(s)	843, 1173, 1260
AfiI	CCNNNNNNNGG	2 cut(s)	450, 1122
AflII	CTTAAG	1 cut(s)	1175
AflIII	ACRYGT	1 cut(s)	204
AgsI	TTSAA	8 cut(s)	280, 329, 434, 691, 901, 979, 1785, 1886
AjnI	CCWGG	2 cut(s)	1047, 1867
AjuI	GAANNNNNNNTTGG	4 cut(s)	431, 463, 842, 874
AluBI	AGCT	8 cut(s)	354, 812, 1400, 1409, 1522, 1622, 1688, 1878
AluI	AGCT	8 cut(s)	354, 812, 1400, 1409, 1522, 1622, 1688, 1878
Alw21I	GWGCWC	2 cut(s)	57, 1572
Alw26I	GTCTC	1 cut(s)	610
AlwI	GGATC	1 cut(s)	1681
AlwNI	CAGNNNCTG	1 cut(s)	1940
Aor13HI	TCCGGA	1 cut(s)	28
AoxI	GGCC	4 cut(s)	322, 1096, 1113, 1852
ApeKI	GCWGC	2 cut(s)	1685, 1875
ApoI	RAATTY	5 cut(s)	244, 547, 685, 692, 1759
ArsI	GACNNNNNNTTYG	2 cut(s)	1498, 1530
Asp700I	GAANNNNTTC	1 cut(s)	905
AspLEI	GCGC	4 cut(s)	385, 406, 709, 1663
AspS9I	GGNCC	2 cut(s)	991, 1852
AsuHPI	GGTGA	5 cut(s)	655, 752, 902, 1516, 1931
AsuII	TTCGAA	1 cut(s)	816
AsuNHI	GCTAGC	1 cut(s)	149
AvaII	GGWCC	1 cut(s)	991
BalI	TGGCCA	1 cut(s)	1098
BarI	GAAGNNNNNNTAC	2 cut(s)	1428, 1460
Bbv12I	GWGCWC	2 cut(s)	57, 1572
BbvI	GCAGC	2 cut(s)	1697, 1887
BccI	CCATC	5 cut(s)	11, 67, 115, 1128, 1803
BciT130I	CCWGG	2 cut(s)	1049, 1869
BclI	TGATCA	1 cut(s)	234
BcoDI	GTCTC	1 cut(s)	610
BfaI	CTAG	5 cut(s)	150, 351, 386, 620, 1715
BfrI	CTTAAG	1 cut(s)	1175
BglII	AGATCT	1 cut(s)	835
BisI	GCNGC	4 cut(s)	607, 864, 1686, 1876
BlsI	GCNGC	4 cut(s)	608, 865, 1687, 1877
Bme1390I	CCNGG	2 cut(s)	1049, 1869
Bme18I	GGWCC	1 cut(s)	991
BmgT120I	GGNCC	2 cut(s)	991, 1852
BmiI	GGNNCC	1 cut(s)	45
BmrFI	CCNGG	2 cut(s)	1049, 1869
BmtI	GCTAGC	1 cut(s)	153
BpmI	CTGGAG	2 cut(s)	852, 1360
Bpu14I	TTCGAA	1 cut(s)	816
BpuEI	CTTGAG	4 cut(s)	41, 649, 755, 987
BsaJI	CCNNGG	2 cut(s)	477, 1030
BsaWI	WCCGGW	1 cut(s)	28
BsaXI	ACNNNNNCTCC	6 cut(s)	825, 855, 1076, 1106, 1712, 1742
Bsc4I	CCNNNNNNNGG	2 cut(s)	450, 1122
Bse1I	ACTGG	4 cut(s)	835, 927, 1377, 1497
Bse3DI	GCAATG	2 cut(s)	1374, 1615
BseAI	TCCGGA	1 cut(s)	28
BseBI	CCWGG	2 cut(s)	1049, 1869
BseDI	CCNNGG	2 cut(s)	477, 1030
BseGI	GGATG	9 cut(s)	292, 502, 525, 586, 653, 1131, 1534, 1621, 1877
BseLI	CCNNNNNNNGG	2 cut(s)	450, 1122
BseMI	GCAATG	2 cut(s)	1374, 1615
BseMII	CTCAG	2 cut(s)	1847, 1932
BseNI	ACTGG	4 cut(s)	835, 927, 1377, 1497
BseRI	GAGGAG	1 cut(s)	1733
BseXI	GCAGC	2 cut(s)	1697, 1887
Bsh1236I	CGCG	2 cut(s)	206, 1640
BshFI	GGCC	4 cut(s)	324, 1098, 1115, 1854
BsiHKAI	GWGCWC	2 cut(s)	57, 1572
BsiSI	CCGG	1 cut(s)	29
BslFI	GGGAC	3 cut(s)	894, 1012, 1826
BslI	CCNNNNNNNGG	2 cut(s)	450, 1122
BsmAI	GTCTC	1 cut(s)	610
BsmFI	GGGAC	3 cut(s)	894, 1012, 1826
BsmI	GAATGC	1 cut(s)	1240
BsnI	GGCC	4 cut(s)	324, 1098, 1115, 1854
Bsp119I	TTCGAA	1 cut(s)	816
Bsp1286I	GDGCHC	2 cut(s)	57, 1572
Bsp13I	TCCGGA	1 cut(s)	28
Bsp143I	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
Bsp68I	TCGCGA	1 cut(s)	1640
BspACI	CCGC	5 cut(s)	66, 607, 863, 1082, 1136
BspANI	GGCC	4 cut(s)	324, 1098, 1115, 1854
BspCNI	CTCAG	2 cut(s)	1848, 1933
BspEI	TCCGGA	1 cut(s)	28
BspFNI	CGCG	2 cut(s)	206, 1640
BspLI	GGNNCC	1 cut(s)	45
BspOI	GCTAGC	1 cut(s)	153
BspPI	GGATC	1 cut(s)	1681
BspT104I	TTCGAA	1 cut(s)	816
BspTI	CTTAAG	1 cut(s)	1175
BsrDI	GCAATG	2 cut(s)	1374, 1615
BsrI	ACTGG	4 cut(s)	835, 927, 1377, 1497
BssECI	CCNNGG	2 cut(s)	477, 1030
BssMI	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
BssT1I	CCWWGG	2 cut(s)	477, 1030
Bst2UI	CCWGG	2 cut(s)	1049, 1869
Bst4CI	ACNGT	4 cut(s)	346, 713, 846, 1457
Bst6I	CTCTTC	1 cut(s)	1207
BstAFI	CTTAAG	1 cut(s)	1175
BstBI	TTCGAA	1 cut(s)	816
BstC8I	GCNNGC	5 cut(s)	64, 151, 402, 408, 1183
BstDEI	CTNAG	2 cut(s)	1856, 1941
BstF5I	GGATG	9 cut(s)	292, 502, 525, 586, 653, 1131, 1534, 1621, 1877
BstFNI	CGCG	2 cut(s)	206, 1640
BstHHI	GCGC	4 cut(s)	385, 406, 709, 1663
BstKTI	GATC	6 cut(s)	237, 838, 1071, 1374, 1676, 1735
BstMAI	GTCTC	1 cut(s)	610
BstMBI	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
BstNI	CCWGG	2 cut(s)	1049, 1869
BstNSI	RCATGY	2 cut(s)	410, 1488
BstSCI	CCNGG	2 cut(s)	1047, 1867
BstUI	CGCG	2 cut(s)	206, 1640
BstV1I	GCAGC	2 cut(s)	1697, 1887
BstX2I	RGATCY	1 cut(s)	835
BstYI	RGATCY	1 cut(s)	835
BsuRI	GGCC	4 cut(s)	324, 1098, 1115, 1854
BtgZI	GCGATG	2 cut(s)	86, 1655
BtsCI	GGATG	9 cut(s)	292, 502, 525, 586, 653, 1131, 1534, 1621, 1877
BtsIMutI	CAGTG	2 cut(s)	709, 1462
BtuMI	TCGCGA	1 cut(s)	1640
Cac8I	GCNNGC	5 cut(s)	64, 151, 402, 408, 1183
CaiI	CAGNNNCTG	1 cut(s)	1940
CfoI	GCGC	4 cut(s)	385, 406, 709, 1663
Cfr13I	GGNCC	2 cut(s)	991, 1852
CsiI	ACCWGGT	1 cut(s)	1047
Csp6I	GTAC	3 cut(s)	842, 1172, 1259
CviQI	GTAC	3 cut(s)	842, 1172, 1259
DdeI	CTNAG	2 cut(s)	1856, 1941
DpnI	GATC	6 cut(s)	236, 837, 1070, 1373, 1675, 1734
DpnII	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
DraI	TTTAAA	1 cut(s)	1431
EaeI	YGGCCR	1 cut(s)	1096
Eam1104I	CTCTTC	1 cut(s)	1207
EarI	CTCTTC	1 cut(s)	1207
EciI	GGCGGA	1 cut(s)	1097
Eco130I	CCWWGG	2 cut(s)	477, 1030
Eco147I	AGGCCT	2 cut(s)	324, 1115
Eco47I	GGWCC	1 cut(s)	991
Eco57I	CTGAAG	1 cut(s)	1530
EcoO109I	RGGNCCY	1 cut(s)	1852
EcoRI	GAATTC	2 cut(s)	244, 1759
EcoRII	CCWGG	2 cut(s)	1047, 1867
EcoT14I	CCWWGG	2 cut(s)	477, 1030
EcoT22I	ATGCAT	4 cut(s)	12, 412, 1486, 1792
ErhI	CCWWGG	2 cut(s)	477, 1030
FalI	AAGNNNNNCTT	2 cut(s)	796, 828
FaqI	GGGAC	3 cut(s)	894, 1012, 1826
FauI	CCCGC	2 cut(s)	59, 1129
FauNDI	CATATG	1 cut(s)	1792
FbaI	TGATCA	1 cut(s)	234
FblI	GTMKAC	2 cut(s)	768, 1308
Fnu4HI	GCNGC	4 cut(s)	607, 864, 1686, 1876
FokI	GGATG	9 cut(s)	299, 509, 532, 593, 640, 1138, 1541, 1628, 1884
Fsp4HI	GCNGC	4 cut(s)	607, 864, 1686, 1876
FspBI	CTAG	5 cut(s)	150, 351, 386, 620, 1715
FspI	TGCGCA	1 cut(s)	1662
GlaI	GCGC	4 cut(s)	384, 405, 708, 1662
GluI	GCNGC	4 cut(s)	607, 864, 1686, 1876
GsuI	CTGGAG	2 cut(s)	852, 1360
HaeIII	GGCC	4 cut(s)	324, 1098, 1115, 1854
HapII	CCGG	1 cut(s)	29
HhaI	GCGC	4 cut(s)	385, 406, 709, 1663
Hin6I	GCGC	4 cut(s)	383, 404, 707, 1661
HinP1I	GCGC	4 cut(s)	383, 404, 707, 1661
HindIII	AAGCTT	1 cut(s)	1620
HinfI	GANTC	6 cut(s)	638, 646, 818, 1140, 1864, 1882
HpaII	CCGG	1 cut(s)	29
HphI	GGTGA	5 cut(s)	655, 752, 902, 1516, 1931
Hpy166II	GTNNAC	4 cut(s)	428, 769, 1172, 1309
Hpy188I	TCNGA	6 cut(s)	48, 915, 963, 1125, 1342, 1732
Hpy188III	TCNNGA	6 cut(s)	29, 118, 596, 1004, 1639, 1764
Hpy8I	GTNNAC	4 cut(s)	428, 769, 1172, 1309
Hpy99I	CGWCG	1 cut(s)	1640
HpyAV	CCTTC	6 cut(s)	314, 386, 510, 1126, 1433, 1505
HpyCH4III	ACNGT	4 cut(s)	346, 713, 846, 1457
HpyF3I	CTNAG	2 cut(s)	1856, 1941
HspAI	GCGC	4 cut(s)	383, 404, 707, 1661
Kpn2I	TCCGGA	1 cut(s)	28
Ksp22I	TGATCA	1 cut(s)	234
Kzo9I	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
LmnI	GCTCC	1 cut(s)	1519
Lsp1109I	GCAGC	2 cut(s)	1697, 1887
MabI	ACCWGGT	1 cut(s)	1047
MaeI	CTAG	5 cut(s)	150, 351, 386, 620, 1715
MaeIII	GTNAC	9 cut(s)	340, 538, 643, 1051, 1350, 1379, 1459, 1504, 1919
MalI	GATC	6 cut(s)	236, 837, 1070, 1373, 1675, 1734
MboI	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
MboII	GAAGA	7 cut(s)	26, 401, 1224, 1448, 1583, 1818, 1907
MfeI	CAATTG	1 cut(s)	1263
MflI	RGATCY	1 cut(s)	835
MhlI	GDGCHC	2 cut(s)	57, 1572
MlsI	TGGCCA	1 cut(s)	1098
MluI	ACGCGT	1 cut(s)	204
MluNI	TGGCCA	1 cut(s)	1098
MlyI	GAGTC	2 cut(s)	632, 640
MmeI	TCCRAC	1 cut(s)	1950
Mox20I	TGGCCA	1 cut(s)	1098
Mph1103I	ATGCAT	4 cut(s)	12, 412, 1486, 1792
MroI	TCCGGA	1 cut(s)	28
MroXI	GAANNNNTTC	1 cut(s)	905
MscI	TGGCCA	1 cut(s)	1098
MseI	TTAA	5 cut(s)	611, 1176, 1430, 1587, 1838
MslI	CAYNNNNRTG	4 cut(s)	15, 108, 888, 1190
Msp20I	TGGCCA	1 cut(s)	1098
MspA1I	CMGCKG	1 cut(s)	1878
MspCI	CTTAAG	1 cut(s)	1175
MspI	CCGG	1 cut(s)	29
MspR9I	CCNGG	2 cut(s)	1049, 1869
MunI	CAATTG	1 cut(s)	1263
Mva1269I	GAATGC	1 cut(s)	1240
MvaI	CCWGG	2 cut(s)	1049, 1869
MvnI	CGCG	2 cut(s)	206, 1640
NdeI	CATATG	1 cut(s)	1792
NdeII	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
NheI	GCTAGC	1 cut(s)	149
NlaIV	GGNNCC	1 cut(s)	45
NmuCI	GTSAC	5 cut(s)	340, 643, 1051, 1504, 1919
NruI	TCGCGA	1 cut(s)	1640
NsbI	TGCGCA	1 cut(s)	1662
NsiI	ATGCAT	4 cut(s)	12, 412, 1486, 1792
NspI	RCATGY	2 cut(s)	410, 1488
NspV	TTCGAA	1 cut(s)	816
PaeI	GCATGC	1 cut(s)	410
PceI	AGGCCT	2 cut(s)	324, 1115
PctI	GAATGC	1 cut(s)	1240
PdmI	GAANNNNTTC	1 cut(s)	905
PfeI	GAWTC	4 cut(s)	818, 1140, 1864, 1882
PflFI	GACNNNGTC	1 cut(s)	346
PfoI	TCCNGGA	1 cut(s)	1867
PkrI	GCNGC	4 cut(s)	608, 865, 1687, 1877
PleI	GAGTC	2 cut(s)	632, 640
PpsI	GAGTC	2 cut(s)	632, 640
PsiI	TTATAA	1 cut(s)	464
Psp6I	CCWGG	2 cut(s)	1047, 1867
PspGI	CCWGG	2 cut(s)	1047, 1867
PspN4I	GGNNCC	1 cut(s)	45
PspPI	GGNCC	2 cut(s)	991, 1852
PstNI	CAGNNNCTG	1 cut(s)	1940
PsuI	RGATCY	1 cut(s)	835
PsyI	GACNNNGTC	1 cut(s)	346
PvuII	CAGCTG	1 cut(s)	1878
RruI	TCGCGA	1 cut(s)	1640
RsaI	GTAC	3 cut(s)	843, 1173, 1260
RsaNI	GTAC	3 cut(s)	842, 1172, 1259
RseI	CAYNNNNRTG	4 cut(s)	15, 108, 888, 1190
SaqAI	TTAA	5 cut(s)	611, 1176, 1430, 1587, 1838
SatI	GCNGC	4 cut(s)	607, 864, 1686, 1876
Sau3AI	GATC	6 cut(s)	234, 835, 1068, 1371, 1673, 1732
Sau96I	GGNCC	2 cut(s)	991, 1852
SchI	GAGTC	2 cut(s)	632, 640
ScrFI	CCNGG	2 cut(s)	1049, 1869
SduI	GDGCHC	2 cut(s)	57, 1572
SexAI	ACCWGGT	1 cut(s)	1047
SfuI	TTCGAA	1 cut(s)	816
SinI	GGWCC	1 cut(s)	991
SmiMI	CAYNNNNRTG	4 cut(s)	15, 108, 888, 1190
SmlI	CTYRAG	5 cut(s)	56, 628, 734, 1002, 1175
SmoI	CTYRAG	5 cut(s)	56, 628, 734, 1002, 1175
SphI	GCATGC	1 cut(s)	410
SseBI	AGGCCT	2 cut(s)	324, 1115
SsiI	CCGC	5 cut(s)	66, 607, 863, 1082, 1136
SspMI	CTAG	5 cut(s)	150, 351, 386, 620, 1715
StuI	AGGCCT	2 cut(s)	324, 1115
StyD4I	CCNGG	2 cut(s)	1047, 1867
StyI	CCWWGG	2 cut(s)	477, 1030
TaaI	ACNGT	4 cut(s)	346, 713, 846, 1457
TaqI	TCGA	4 cut(s)	189, 248, 816, 1038
TatI	WGTACW	2 cut(s)	841, 1171
TauI	GCSGC	2 cut(s)	609, 866
TfiI	GAWTC	4 cut(s)	818, 1140, 1864, 1882
Tru1I	TTAA	5 cut(s)	611, 1176, 1430, 1587, 1838
Tru9I	TTAA	5 cut(s)	611, 1176, 1430, 1587, 1838
TscAI	CASTG	2 cut(s)	716, 1462
TseFI	GTSAC	5 cut(s)	340, 643, 1051, 1504, 1919
TseI	GCWGC	2 cut(s)	1685, 1875
Tsp45I	GTSAC	5 cut(s)	340, 643, 1051, 1504, 1919
TspDTI	ATGAA	6 cut(s)	27, 92, 228, 536, 1632, 1856
TspRI	CASTG	2 cut(s)	716, 1462
Tth111I	GACNNNGTC	1 cut(s)	346
Vha464I	CTTAAG	1 cut(s)	1175
VpaK11BI	GGWCC	1 cut(s)	991
XapI	RAATTY	5 cut(s)	244, 547, 685, 692, 1759
XceI	RCATGY	2 cut(s)	410, 1488
XmiI	GTMKAC	2 cut(s)	768, 1308
XmnI	GAANNNNTTC	1 cut(s)	905
XspI	CTAG	5 cut(s)	150, 351, 386, 620, 1715
Zsp2I	ATGCAT	4 cut(s)	12, 412, 1486, 1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.