Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0015941

Physical Location & Seq

Genomic Coordinates Forward (+)

2187550 .. 2190250

Gene Structure 2701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g04140.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGCCCTTCCCGTTTTATCTAGGATTAACGACCAACCAACCAACCAACCAAACCAGTCAACCGTATCTTCGTCTACCTTTGCTCTGTTTCTCTTCACTCATGGCCTCTTTACCTTACAGAACAATCCCAAACCCACACCCTTCTTCATCCAAAAACTCCACTCCCATAGAAACCCACAAAAAATCCCAAGCCCAATTCCCAAAGCTTCAAGAAAATGCAACCAAAAACCAAACCCTGTCAAAATCTTACTTCACTCAAATGTCCACACTCTCAAAACAGAGCAAAATTCAAGAAGCAGTAGACTTGCTTATCCAAATGGACCTGAAAAGCCTCCGCATTGGCCCTGAAATCTACGGCGAGCTTCTCCAGGCGTGTGTCTACGACCGAGCTCTCCAAACCGGAAAGCAAATCCACGCCCGTATTATCAAGAAAGGTGAGAACTTCGCAAGAAATGAGTACATTGAAACCAAACTAGTAATCTTCTACGCAAAATGTGACGCCCAGAAAGATTCAAATCGTTTGTTTCGGAGAGTTAGAGTAAAAAATGTGTTTTCTTGGGCTGCAGTTATTGGACTAAATTGTAGATTAGGTTTTTACAAAGAGGCATTGCTAGGGTTTATGGAGATGCAAGAAGATGGGTTGTTGCCGGATAACTTTGTTGTTCCGAACGTGTTGAAGGCTTGCGGCGCGGTAGAGTGGATTGGGGTTGGGAGAGCTGTTCATGGATTTGTGGTTAAAATGGGTTGTAATGAGTGTGTTTTTGTTGCTAGTAGTCTTGTGGATATGTATGGGAAATGTGGGGTTGTGGATGAAGCGAGGAAGGTGTTTGATGAAATGGGTGAACGAAATGTGATCACTTGGAATTCGATGATTGTGAGTTATGTGCAGAATGGATTGAATGAGGAAGCTATTAGGGTGTTTTGTGATATGAGGGGGGAAGGTGTTGAGCCTACTCATGTGACTGTGTCTAGCTTTCTTTCGGCTTCGGCTAATTTAGGTGCGATGGAGGAGGGTAAGCAAGGACATGCATTGGCAGTTGTTAGTGGACTTGAACTGAATACTATTTTGGGGAGTTCTGTTATAAATTTTTATTCCAAGGTTGGTTTGATTGAGGATGCTGAAATAGTTTTTAGTAGGATGAATGAGAAAGATGTGGTTACTTGGAATTTGCTTATATCAGGGTATGTGCAAATTGGGGAGGTTGACAAAGCTCTTGAGATGTGCCGCTTAATGAGACTGGAAAACTTGAGGTTTGATTCAGTGACTCTTGCATCCCTAATGTCTGCTTTTGCAGATACTAGAAATTTGAAGTTTGGCAAGGAGGCGCATTGTTATTGTATTCGGAACAACCTTGAGGATGATGTGGTTGTTGCAAGTAGTATTGTAGACTTGTATGCGAAATGTGAGAAAATTGATAGTGCAAGACGCGCTTTCGAATCTGCAACAACTGGGGATCTTGTACTGTGGAACACACTGTTGGCGGCTTATGCAGGATTGGGACATAGCGGTGAGGCATTGAAATTGTTCTATCAGATGCAACTGGAAAGTGTCCCTCCAAATGTGATGACTTGGAACTCTCTGATATTTGGTTTTTTGAAAAATGGCCAGGTCAGTGAGGCTCAAGATATGTTTTTGCAGATGCAACCCCTTGGTGTCGAGCCAAACCTGGTCACTTGGACTACTATGATCTCTGGTTTGGCAGATAATGGTTTTAGCCATGATGCAATTCAGGCCTTCTGTCGGATGCAAGAAGCAGGAATCAAACCCAATGTTGTGAGCATAGTTTGTGTACTCAAGGCTTGCATAGAAATAGCATCATTACAGAACGGAAGAGTTATGCATGGGTATTTGATTAGGCATTTCCTCTACCTTTCAACCCCAGTTGCAACCTCTTTAGTAGATGTGTATGCTAAATGTGGTAATGTAGAAGAAGCAAAGAGAGTGTTTGTTATGGTTTCAGACAAGGAGTTGCCTATCTATAATGCAATGATCTCCAGTTACGCGTTACATGGTCAAGCTGTGGAAGCTCTTGCCCTATACCGACGTTTAAAGGAAGAAGGCTTACAACCAGACAGTGTAACCTTTACTAATGCCTTATATGCATGCAGCCATGCCAGTATGGTGACGGAGGGTTTAGAGCTTTTGGATGACTTGCTATCCAGTCAAACTTTAAATCCAAGTATTGAGCACTATGGTTGTGTGGTTAGTCTTCTTTCCCGGTGTGGCAATGTGGATGAAGCATTTAGGCTGATCGCCGCAATGCCTTACGAACCTGATGCACAGATATTGGGATCATTACTTACAGCTTGTAGAGAACAGAATAACATAAAACTAGAGGATTATTTGTCGGATCAATTACTGAAGTTAGAGCCAGAAAATTCTGGAAACTATGTAGCTATTTCAAATGCATATGCAGATGCAGGAAGATGGGATGAAGTGAAGAAAGTAAGGCAGTTAATGAAAGAAAAGGGCCTGAGAAAGATTCCTGGATGTAGTTGGATTCAAATTGGAGAAGAAATTCATGCATTTGTTGCTGGTGACAAATCACACCCTGAAGCTGAGCAAATCTATATGACATTGGAATTGTTGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

865

Amino Acids

96.17

Weight (kDa)

5.57

Isoelectric Point (pI)

36.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	282 - 329	2.7e-11	PPR repeat family
PPR	PF01535	285 - 315	8.9e-08	PPR repeat
PPR_2	PF13041	383 - 431	5.3e-09	PPR repeat family
PPR	PF01535	386 - 415	2.4e-06	PPR repeat
PPR_2	PF13041	485 - 523	1.8e-06	PPR repeat family
PPR_1	PF12854	517 - 547	1.8e-06	PPR repeat
PPR_2	PF13041	519 - 567	1.5e-14	PPR repeat family
PPR_3	PF13812	546 - 601	1.8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	551 - 582	1.5e-06	PPR repeat
PPR_2	PF13041	554 - 601	1.1e-09	PPR repeat family
PPR	PF01535	557 - 587	2.2e-06	PPR repeat
PPR_2	PF13041	659 - 703	5.4e-08	PPR repeat family
PPR	PF01535	659 - 688	9.3e-06	PPR repeat
E_motif	PF20431	774 - 835	1.1e-21	E motif
Eplus_motif	PF20430	840 - 861	2e-07	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55740
fragaria_vesca	FvH4_1g04140
malus_domestica	MD02G1039900.v1.1
prunus_persica	Prupe.7G235800_v2.0.a1
pyrus_communis	pycom02g03320
rosa_chinensis	RchiOBHm_Chr2g0089611
rosa_laevigata	RLG00000016045
rosa_multiflora	Rmu_sc0004662.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151710
rosa_rugosa	Rorug02G0002100
rosa_samantha	Rh2AG047400 Rh2BG046100 Rh2CG048000 Rh2DG047500
rosa_wichuraiana	Rw2G003950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1082
AccI	GTMKAC	4 cut(s)	73, 300, 378, 1386
AccII	CGCG	3 cut(s)	689, 1428, 2003
AciI	CCGC	7 cut(s)	334, 684, 689, 1225, 1481, 1506, 2256
AclWI	GGATC	3 cut(s)	1461, 2299, 2358
AcoI	YGGCCR	1 cut(s)	1603
AcsI	RAATTY	7 cut(s)	285, 862, 1084, 1165, 1303, 2377, 2517
AcuI	CTGAAG	2 cut(s)	2381, 2574
AcyI	GRCGYC	1 cut(s)	498
AfaI	GTAC	3 cut(s)	458, 1461, 1791
AfiI	CCNNNNNNNGG	1 cut(s)	1740
AflIII	ACRYGT	2 cut(s)	669, 2001
AhlI	ACTAGT	1 cut(s)	472
AjnI	CCWGG	4 cut(s)	366, 1605, 1665, 2485
AjuI	GAANNNNNNNTTGG	4 cut(s)	1049, 1081, 1460, 1492
Alw21I	GWGCWC	2 cut(s)	391, 2190
Alw26I	GTCTC	1 cut(s)	1228
AlwI	GGATC	3 cut(s)	1461, 2299, 2358
AoxI	GGCC	5 cut(s)	102, 340, 1603, 1731, 2470
ApeKI	GCWGC	2 cut(s)	560, 2106
ApoI	RAATTY	7 cut(s)	285, 862, 1084, 1165, 1303, 2377, 2517
Asp700I	GAANNNNTTC	2 cut(s)	1523, 2517
AspLEI	GCGC	3 cut(s)	689, 1327, 1430
AspS9I	GGNCC	3 cut(s)	319, 341, 2470
AsuC2I	CCSGG	1 cut(s)	2218
AsuHPI	GGTGA	5 cut(s)	446, 851, 1520, 2134, 2549
AsuII	TTCGAA	1 cut(s)	1434
AvaII	GGWCC	1 cut(s)	319
BalI	TGGCCA	1 cut(s)	1605
BanII	GRGCYC	1 cut(s)	391
BarI	GAAGNNNNNNTAC	2 cut(s)	2046, 2078
BbsI	GAAGAC	1 cut(s)	2201
Bbv12I	GWGCWC	2 cut(s)	391, 2190
BbvI	GCAGC	2 cut(s)	547, 2118
BccI	CCATC	3 cut(s)	629, 997, 2421
BceAI	ACGGC	1 cut(s)	370
BcgI	CGANNNNNNTGC	2 cut(s)	2258, 2292
BciT130I	CCWGG	4 cut(s)	368, 1607, 1667, 2487
BclI	TGATCA	1 cut(s)	852
BcnI	CCSGG	1 cut(s)	2218
BcoDI	GTCTC	1 cut(s)	1228
BcuI	ACTAGT	1 cut(s)	472
BfaI	CTAG	7 cut(s)	20, 473, 611, 768, 969, 1299, 2333
BfmI	CTRYAG	1 cut(s)	561
BisI	GCNGC	6 cut(s)	561, 685, 1225, 1482, 2107, 2256
BlpI	GCTNAGC	1 cut(s)	2559
BlsI	GCNGC	6 cut(s)	562, 686, 1226, 1483, 2108, 2257
Bme1390I	CCNGG	5 cut(s)	368, 1607, 1667, 2218, 2487
Bme18I	GGWCC	1 cut(s)	319
BmgT120I	GGNCC	3 cut(s)	319, 341, 2470
BmrFI	CCNGG	5 cut(s)	368, 1607, 1667, 2218, 2487
BmrI	ACTGGG	2 cut(s)	1458, 1874
BmuI	ACTGGG	2 cut(s)	1458, 1874
BpiI	GAAGAC	1 cut(s)	2201
BpmI	CTGGAG	2 cut(s)	350, 1978
Bpu1102I	GCTNAGC	1 cut(s)	2559
Bpu14I	TTCGAA	1 cut(s)	1434
BpuEI	CTTGAG	5 cut(s)	1235, 1267, 1373, 1605, 1778
BpuMI	CCSGG	1 cut(s)	2218
BsaBI	GATNNNNATC	1 cut(s)	513
BsaHI	GRCGYC	1 cut(s)	498
BsaJI	CCNNGG	2 cut(s)	1095, 1648
BsaWI	WCCGGW	1 cut(s)	398
Bsc4I	CCNNNNNNNGG	1 cut(s)	1740
Bse1I	ACTGG	8 cut(s)	54, 1242, 1453, 1545, 1880, 1995, 2115, 2160
Bse3DI	GCAATG	4 cut(s)	605, 1992, 2233, 2265
Bse8I	GATNNNNATC	1 cut(s)	513
BseBI	CCWGG	4 cut(s)	368, 1607, 1667, 2487
BseDI	CCNNGG	2 cut(s)	1095, 1648
BseJI	GATNNNNATC	1 cut(s)	513
BseLI	CCNNNNNNNGG	1 cut(s)	1740
BseMI	GCAATG	4 cut(s)	605, 1992, 2233, 2265
BseMII	CTCAG	2 cut(s)	2465, 2550
BseNI	ACTGG	8 cut(s)	54, 1242, 1453, 1545, 1880, 1995, 2115, 2160
BseRI	GAGGAG	1 cut(s)	1022
BseXI	GCAGC	2 cut(s)	547, 2118
BsgI	GTGCAG	1 cut(s)	905
Bsh1236I	CGCG	3 cut(s)	689, 1428, 2003
Bsh1285I	CGRYCG	1 cut(s)	385
BshFI	GGCC	5 cut(s)	104, 342, 1605, 1733, 2472
BsiEI	CGRYCG	1 cut(s)	385
BsiHKAI	GWGCWC	2 cut(s)	391, 2190
BsiSI	CCGG	3 cut(s)	399, 647, 2218
BslFI	GGGAC	2 cut(s)	1512, 1535
BslI	CCNNNNNNNGG	1 cut(s)	1740
BsmAI	GTCTC	1 cut(s)	1228
BsmFI	GGGAC	2 cut(s)	1512, 1535
BsnI	GGCC	5 cut(s)	104, 342, 1605, 1733, 2472
Bsp119I	TTCGAA	1 cut(s)	1434
Bsp1286I	GDGCHC	2 cut(s)	391, 2190
Bsp143I	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
Bsp1720I	GCTNAGC	1 cut(s)	2559
BspACI	CCGC	7 cut(s)	334, 684, 689, 1225, 1481, 1506, 2256
BspANI	GGCC	5 cut(s)	104, 342, 1605, 1733, 2472
BspCNI	CTCAG	2 cut(s)	2466, 2551
BspFNI	CGCG	3 cut(s)	689, 1428, 2003
BspMAI	CTGCAG	1 cut(s)	565
BspPI	GGATC	3 cut(s)	1461, 2299, 2358
BspT104I	TTCGAA	1 cut(s)	1434
BsrDI	GCAATG	4 cut(s)	605, 1992, 2233, 2265
BsrI	ACTGG	8 cut(s)	54, 1242, 1453, 1545, 1880, 1995, 2115, 2160
BssECI	CCNNGG	2 cut(s)	1095, 1648
BssMI	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
BssNI	GRCGYC	1 cut(s)	498
BssT1I	CCWWGG	2 cut(s)	1095, 1648
Bst2UI	CCWGG	4 cut(s)	368, 1607, 1667, 2487
Bst4CI	ACNGT	5 cut(s)	63, 964, 1464, 1476, 2075
Bst6I	CTCTTC	2 cut(s)	97, 1825
BstACI	GRCGYC	1 cut(s)	498
BstAPI	GCANNNNNTGC	1 cut(s)	2531
BstBI	TTCGAA	1 cut(s)	1434
BstC8I	GCNNGC	4 cut(s)	359, 682, 1801, 2104
BstDEI	CTNAG	2 cut(s)	2474, 2559
BstFNI	CGCG	3 cut(s)	689, 1428, 2003
BstHHI	GCGC	3 cut(s)	689, 1327, 1430
BstKTI	GATC	7 cut(s)	855, 1456, 1689, 1992, 2253, 2294, 2353
BstMAI	GTCTC	1 cut(s)	1228
BstMBI	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
BstMCI	CGRYCG	1 cut(s)	385
BstMWI	GCNNNNNNNGC	7 cut(s)	686, 1427, 1487, 1730, 2024, 2099, 2531
BstNI	CCWGG	4 cut(s)	368, 1607, 1667, 2487
BstNSI	RCATGY	2 cut(s)	1028, 2106
BstSCI	CCNGG	5 cut(s)	366, 1605, 1665, 2216, 2485
BstSFI	CTRYAG	1 cut(s)	561
BstUI	CGCG	3 cut(s)	689, 1428, 2003
BstV1I	GCAGC	2 cut(s)	547, 2118
BstV2I	GAAGAC	1 cut(s)	2201
BstX2I	RGATCY	1 cut(s)	1453
BstYI	RGATCY	1 cut(s)	1453
BsuRI	GGCC	5 cut(s)	104, 342, 1605, 1733, 2472
BtgZI	GCGATG	1 cut(s)	1016
BtsIMutI	CAGTG	4 cut(s)	1266, 1472, 1618, 2080
Cac8I	GCNNGC	4 cut(s)	359, 682, 1801, 2104
CfoI	GCGC	3 cut(s)	689, 1327, 1430
Cfr13I	GGNCC	3 cut(s)	319, 341, 2470
CseI	GACGC	2 cut(s)	506, 1434
CsiI	ACCWGGT	1 cut(s)	1665
Csp6I	GTAC	3 cut(s)	457, 1460, 1790
CviQI	GTAC	3 cut(s)	457, 1460, 1790
DdeI	CTNAG	2 cut(s)	2474, 2559
DpnI	GATC	7 cut(s)	854, 1455, 1688, 1991, 2252, 2293, 2352
DpnII	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
DraI	TTTAAA	2 cut(s)	2049, 2172
EaeI	YGGCCR	1 cut(s)	1603
Eam1104I	CTCTTC	2 cut(s)	97, 1825
EarI	CTCTTC	2 cut(s)	97, 1825
Ecl136II	GAGCTC	1 cut(s)	389
Eco130I	CCWWGG	2 cut(s)	1095, 1648
Eco147I	AGGCCT	1 cut(s)	1733
Eco24I	GRGCYC	1 cut(s)	391
Eco47I	GGWCC	1 cut(s)	319
Eco53kI	GAGCTC	1 cut(s)	389
Eco57I	CTGAAG	2 cut(s)	2381, 2574
EcoICRI	GAGCTC	1 cut(s)	389
EcoO109I	RGGNCCY	1 cut(s)	2470
EcoRI	GAATTC	1 cut(s)	862
EcoRII	CCWGG	4 cut(s)	366, 1605, 1665, 2485
EcoT14I	CCWWGG	2 cut(s)	1095, 1648
EcoT22I	ATGCAT	5 cut(s)	1030, 1842, 2104, 2410, 2527
EcoT38I	GRGCYC	1 cut(s)	391
ErhI	CCWWGG	2 cut(s)	1095, 1648
FalI	AAGNNNNNCTT	2 cut(s)	1414, 1446
FaqI	GGGAC	2 cut(s)	1512, 1535
FauNDI	CATATG	1 cut(s)	2410
FbaI	TGATCA	1 cut(s)	852
FblI	GTMKAC	4 cut(s)	73, 300, 378, 1386
Fnu4HI	GCNGC	6 cut(s)	561, 685, 1225, 1482, 2107, 2256
FriOI	GRGCYC	1 cut(s)	391
Fsp4HI	GCNGC	6 cut(s)	561, 685, 1225, 1482, 2107, 2256
FspBI	CTAG	7 cut(s)	20, 473, 611, 768, 969, 1299, 2333
GlaI	GCGC	3 cut(s)	688, 1326, 1429
GluI	GCNGC	6 cut(s)	561, 685, 1225, 1482, 2107, 2256
GsuI	CTGGAG	2 cut(s)	350, 1978
HaeIII	GGCC	5 cut(s)	104, 342, 1605, 1733, 2472
HapII	CCGG	3 cut(s)	399, 647, 2218
HgaI	GACGC	2 cut(s)	506, 1434
HhaI	GCGC	3 cut(s)	689, 1327, 1430
Hin1I	GRCGYC	1 cut(s)	498
Hin6I	GCGC	3 cut(s)	687, 1325, 1428
HinP1I	GCGC	3 cut(s)	687, 1325, 1428
HincII	GTYRAC	2 cut(s)	59, 1204
HindII	GTYRAC	2 cut(s)	59, 1204
HindIII	AAGCTT	1 cut(s)	203
HinfI	GANTC	7 cut(s)	509, 1256, 1264, 1436, 1758, 2482, 2500
HpaII	CCGG	3 cut(s)	399, 647, 2218
HphI	GGTGA	5 cut(s)	446, 851, 1520, 2134, 2549
Hpy188I	TCNGA	8 cut(s)	528, 666, 1344, 1533, 1581, 1743, 1960, 2350
Hpy188III	TCNNGA	6 cut(s)	209, 290, 427, 1214, 1622, 2382
Hpy99I	CGWCG	1 cut(s)	2046
HpyAV	CCTTC	7 cut(s)	16, 150, 670, 814, 932, 1744, 2051
HpyCH4III	ACNGT	5 cut(s)	63, 964, 1464, 1476, 2075
HpyCH4IV	ACGT	2 cut(s)	669, 2044
HpyF10VI	GCNNNNNNNGC	7 cut(s)	686, 1427, 1487, 1730, 2024, 2099, 2531
HpyF3I	CTNAG	2 cut(s)	2474, 2559
HpySE526I	ACGT	2 cut(s)	669, 2044
Hsp92I	GRCGYC	1 cut(s)	498
HspAI	GCGC	3 cut(s)	687, 1325, 1428
Ksp22I	TGATCA	1 cut(s)	852
Kzo9I	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
Lsp1109I	GCAGC	2 cut(s)	547, 2118
MabI	ACCWGGT	1 cut(s)	1665
MaeI	CTAG	7 cut(s)	20, 473, 611, 768, 969, 1299, 2333
MaeII	ACGT	2 cut(s)	669, 2044
MalI	GATC	7 cut(s)	854, 1455, 1688, 1991, 2252, 2293, 2352
MboI	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
MflI	RGATCY	1 cut(s)	1453
MhlI	GDGCHC	2 cut(s)	391, 2190
MlsI	TGGCCA	1 cut(s)	1605
MluI	ACGCGT	1 cut(s)	2001
MluNI	TGGCCA	1 cut(s)	1605
MlyI	GAGTC	1 cut(s)	1258
MmeI	TCCRAC	4 cut(s)	1721, 2328, 2477, 2568
Mox20I	TGGCCA	1 cut(s)	1605
Mph1103I	ATGCAT	5 cut(s)	1030, 1842, 2104, 2410, 2527
MroXI	GAANNNNTTC	2 cut(s)	1523, 2517
MscI	TGGCCA	1 cut(s)	1605
MseI	TTAA	6 cut(s)	26, 735, 1229, 2048, 2171, 2456
MslI	CAYNNNNRTG	2 cut(s)	257, 1506
Msp20I	TGGCCA	1 cut(s)	1605
MspI	CCGG	3 cut(s)	399, 647, 2218
MspR9I	CCNGG	5 cut(s)	368, 1607, 1667, 2218, 2487
MvaI	CCWGG	4 cut(s)	368, 1607, 1667, 2487
MvnI	CGCG	3 cut(s)	689, 1428, 2003
MwoI	GCNNNNNNNGC	7 cut(s)	686, 1427, 1487, 1730, 2024, 2099, 2531
NciI	CCSGG	1 cut(s)	2218
NdeI	CATATG	1 cut(s)	2410
NdeII	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
NmuCI	GTSAC	6 cut(s)	494, 958, 1261, 1669, 2122, 2537
NsiI	ATGCAT	5 cut(s)	1030, 1842, 2104, 2410, 2527
NspI	RCATGY	2 cut(s)	1028, 2106
NspV	TTCGAA	1 cut(s)	1434
PaeI	GCATGC	1 cut(s)	2106
PceI	AGGCCT	1 cut(s)	1733
PdmI	GAANNNNTTC	2 cut(s)	1523, 2517
PfeI	GAWTC	6 cut(s)	509, 1256, 1436, 1758, 2482, 2500
PflFI	GACNNNGTC	1 cut(s)	964
PfoI	TCCNGGA	1 cut(s)	2485
PkrI	GCNGC	6 cut(s)	562, 686, 1226, 1483, 2108, 2257
PleI	GAGTC	1 cut(s)	1258
PpsI	GAGTC	1 cut(s)	1258
PsiI	TTATAA	1 cut(s)	1082
Psp124BI	GAGCTC	1 cut(s)	391
Psp6I	CCWGG	4 cut(s)	366, 1605, 1665, 2485
PspGI	CCWGG	4 cut(s)	366, 1605, 1665, 2485
PspPI	GGNCC	3 cut(s)	319, 341, 2470
PstI	CTGCAG	1 cut(s)	565
PsuI	RGATCY	1 cut(s)	1453
PsyI	GACNNNGTC	1 cut(s)	964
RsaI	GTAC	3 cut(s)	458, 1461, 1791
RsaNI	GTAC	3 cut(s)	457, 1460, 1790
RseI	CAYNNNNRTG	2 cut(s)	257, 1506
SacI	GAGCTC	1 cut(s)	391
SaqAI	TTAA	6 cut(s)	26, 735, 1229, 2048, 2171, 2456
SatI	GCNGC	6 cut(s)	561, 685, 1225, 1482, 2107, 2256
Sau3AI	GATC	7 cut(s)	852, 1453, 1686, 1989, 2250, 2291, 2350
Sau96I	GGNCC	3 cut(s)	319, 341, 2470
SchI	GAGTC	1 cut(s)	1258
ScrFI	CCNGG	5 cut(s)	368, 1607, 1667, 2218, 2487
SduI	GDGCHC	2 cut(s)	391, 2190
SexAI	ACCWGGT	1 cut(s)	1665
SfcI	CTRYAG	1 cut(s)	561
SfuI	TTCGAA	1 cut(s)	1434
SinI	GGWCC	1 cut(s)	319
SmiMI	CAYNNNNRTG	2 cut(s)	257, 1506
SmlI	CTYRAG	5 cut(s)	1214, 1246, 1352, 1620, 1793
SmoI	CTYRAG	5 cut(s)	1214, 1246, 1352, 1620, 1793
SpeI	ACTAGT	1 cut(s)	472
SphI	GCATGC	1 cut(s)	2106
SseBI	AGGCCT	1 cut(s)	1733
SsiI	CCGC	7 cut(s)	334, 684, 689, 1225, 1481, 1506, 2256
SspMI	CTAG	7 cut(s)	20, 473, 611, 768, 969, 1299, 2333
SstI	GAGCTC	1 cut(s)	391
StuI	AGGCCT	1 cut(s)	1733
StyD4I	CCNGG	5 cut(s)	366, 1605, 1665, 2216, 2485
StyI	CCWWGG	2 cut(s)	1095, 1648
TaaI	ACNGT	5 cut(s)	63, 964, 1464, 1476, 2075
TaiI	ACGT	2 cut(s)	672, 2047
TaqI	TCGA	3 cut(s)	866, 1434, 1656
TaqII	GACCGA	1 cut(s)	399
TatI	WGTACW	3 cut(s)	456, 1459, 1789
TauI	GCSGC	4 cut(s)	687, 1227, 1484, 2258
TfiI	GAWTC	6 cut(s)	509, 1256, 1436, 1758, 2482, 2500
Tru1I	TTAA	6 cut(s)	26, 735, 1229, 2048, 2171, 2456
Tru9I	TTAA	6 cut(s)	26, 735, 1229, 2048, 2171, 2456
TscAI	CASTG	4 cut(s)	1266, 1479, 1618, 2080
TseFI	GTSAC	6 cut(s)	494, 958, 1261, 1669, 2122, 2537
TseI	GCWGC	2 cut(s)	560, 2106
Tsp45I	GTSAC	6 cut(s)	494, 958, 1261, 1669, 2122, 2537
TspDTI	ATGAA	9 cut(s)	135, 710, 825, 846, 1154, 2250, 2448, 2474, 2510
TspGWI	ACGGA	2 cut(s)	1842, 2141
TspRI	CASTG	4 cut(s)	1266, 1479, 1618, 2080
Tth111I	GACNNNGTC	1 cut(s)	964
VpaK11BI	GGWCC	1 cut(s)	319
XapI	RAATTY	7 cut(s)	285, 862, 1084, 1165, 1303, 2377, 2517
XceI	RCATGY	2 cut(s)	1028, 2106
XmiI	GTMKAC	4 cut(s)	73, 300, 378, 1386
XmnI	GAANNNNTTC	2 cut(s)	1523, 2517
XspI	CTAG	7 cut(s)	20, 473, 611, 768, 969, 1299, 2333
Zsp2I	ATGCAT	5 cut(s)	1030, 1842, 2104, 2410, 2527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.