AT5G56270
WRKY Family

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
22779614 .. 22783426
3813 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G56270.1

Sequence Viewer

Length: 2064 bp
ATGGCTGGTTTTGATGAAAATGTTGCTGTGATGGGAGAATGGGTGCCTCGTAGTCCTAGTCCCGGGACACTTTTCTCCTCTGCTATTGGAGAAGAGAAGAGCTCGAAACGTGTTCTTGAAAGAGAGTTATCTTTGAATCATGGTCAAGTTATTGGTTTAGAAGAAGACACTAGTAGTAATCATAACAAGGATTCTTCACAAAGCAATGTTTTTCGAGGTGGTCTCAGTGAAAGAATTGCTGCAAGAGCTGGATTTAATGCTCCAAGGTTGAACACTGAGAATATCCGCACCAACACCGACTTTTCCATTGACTCTAACCTTCGATCTCCTTGCTTAACCATCTCTTCTCCTGGCCTTAGCCCTGCAACACTCTTGGAATCTCCTGTTTTCCTTTCTAACCCATTGGCTCAACCTTCTCCAACTACCGGGAAATTTCCATTTCTTCCTGGTGTTAATGGTAATGCATTGTCTTCTGAGAAAGCGAAAGACGAGTTCTTTGATGATATTGGAGCATCATTCAGCTTCCATCCTGTTTCAAGATCATCTTCCTCTTTCTTCCAAGGCACAACAGAGATGATGTCAGTTGATTATGGTAACTACAACAATAGATCTTCTTCTCATCAATCCGCAGAAGAAGTAAAACCTGGCTCTGAAAACATAGAAAGCTCCAATCTTTATGGGATTGAAACTGACAATCAAAACGGGCAGAACAAGACATCTGATGTCACTACAAACACCAGTCTTGAAACCGTGGATCATCAAGAGGAAGAAGAAGAGCAAAGACGCGGTGATTCGATGGCTGGTGGTGCGCCTGCAGAGGATGGATATAACTGGAGGAAATACGGACAAAAGTTGGTCAAAGGAAGTGAGTATCCGCGAAGCTATTACAAGTGCACAAACCCGAATTGTCAGGTGAAGAAGAAAGTTGAGAGATCAAGGGAAGGTCACATCACAGAGATTATATACAAAGGAGCTCATAATCATCTTAAACCTCCACCTAATCGCCGCTCAGGGATGCAAGTAGATGGAACTGAACAAGTTGAACAACAACAACAACAGAGAGATTCTGCTGCAACGTGGGTTAGTTGTAATAACACTCAACAACAAGGTGGAAGCAATGAGAACAATGTCGAAGAGGGATCTACGAGATTCGAGTATGGAAACCAATCTGGATCAATTCAAGCTCAAACCGGAGGTCAATACGAGTCAGGTGATCCTGTGGTTGTGGTTGATGCTTCTTCAACATTCTCTAATGATGAAGATGAAGATGATCGAGGGACACATGGAAGTGTTTCTTTGGGTTACGATGGAGGAGGAGGAGGTGGGGGAGGAGAAGGAGATGAATCAGAGTCGAAAAGAAGGAAACTAGAAGCTTTTGCAGCAGAGATGAGTGGATCAACAAGAGCCATACGTGAGCCAAGAGTTGTTGTGCAGACAACGAGTGATGTTGACATTCTTGATGATGGTTATCGCTGGCGAAAATATGGTCAGAAAGTTGTCAAAGGCAATCCAAATCCAAGGAGTTATTACAAATGCACAGCTCCAGGATGTACAGTGAGGAAACATGTTGAAAGAGCTTCTCATGATCTCAAATCCGTTATAACAACTTACGAAGGCAAACATAACCATGACGTCCCCGCTGCACGCAACAGCAGCCACGGAGGCGGTGGTGATAGTGGTAACGGTAACAGCGGCGGTTCAGCCGCAGTTTCTCACCATTACCACAACGGTCATCACTCAGAGCCGCCACGTGGGAGATTCGACAGACAAGTCACAACTAACAATCAGTCTCCTTTTAGCCGTCCCTTTAGCTTTCAGCCACATTTGGGTCCTCCTTCTGGTTTCTCCTTCGGTTTAGGACAAACCGGTTTGGTTAATCTTTCAATGCCTGGTTTAGCGTATGGTCAAGGGAAAATGCCGGGTTTGCCTCACCCGTATATGACACAACCGGTTGGGATGAGTGAAGCAATGATGCAGAGAGGGATGGAACCAAAGGTTGAACCGGTTTCAGATTCAGGACAATCGGTATATAACCAGATCATGAGTAGATTACCTCAGATTTGA

Protein Analysis

687

Amino Acids

74.56

Weight (kDa)

5.71

Isoelectric Point (pI)

60.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WRKY PF03106 273 - 328 1.4e-25 WRKY DNA -binding domain
WRKY PF03106 487 - 544 1.7e-25 WRKY DNA -binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1601
AasI GACNNNNNNGTC 1 cut(s) 1769
AatII GACGTC 1 cut(s) 1635
AccB1I GGYRCC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 1008
AccII CGCG 2 cut(s) 786, 877
AclWI GGATC 5 cut(s) 762, 1147, 1180, 1208, 1402
AcsI RAATTY 1 cut(s) 431
AcvI CACGTG 1 cut(s) 1751
AcyI GRCGYC 1 cut(s) 1632
AfaI GTAC 1 cut(s) 1552
AfiI CCNNNNNNNGG 5 cut(s) 62, 425, 1751, 1826, 1838
AflIII ACRYGT 2 cut(s) 109, 1564
AgeI ACCGGT 3 cut(s) 1865, 1948, 2002
AhlI ACTAGT 1 cut(s) 170
AjnI CCWGG 5 cut(s) 349, 445, 643, 1543, 1888
Alw21I GWGCWC 3 cut(s) 104, 896, 976
Alw26I GTCTC 2 cut(s) 227, 1794
Alw44I GTGCAC 1 cut(s) 892
AlwI GGATC 5 cut(s) 762, 1147, 1180, 1208, 1402
Ama87I CYCGRG 1 cut(s) 62
AoxI GGCC 1 cut(s) 352
ApaLI GTGCAC 1 cut(s) 892
ApeKI GCWGC 5 cut(s) 239, 1070, 1379, 1640, 1653
ApoI RAATTY 1 cut(s) 431
ArsI GACNNNNNNTTYG 6 cut(s) 479, 511, 1180, 1212, 1471, 1503
AsiGI ACCGGT 3 cut(s) 1865, 1948, 2002
Asp700I GAANNNNTTC 1 cut(s) 1291
AspLEI GCGC 1 cut(s) 811
AspS9I GGNCC 1 cut(s) 1829
AsuC2I CCSGG 4 cut(s) 63, 64, 427, 1920
AsuHPI GGTGA 6 cut(s) 800, 925, 1223, 1682, 1706, 1922
AvaI CYCGRG 1 cut(s) 62
AvaII GGWCC 1 cut(s) 1829
BaeGI GKGCMC 1 cut(s) 896
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 2 cut(s) 104, 976
BbrPI CACGTG 1 cut(s) 1751
BbsI GAAGAC 2 cut(s) 171, 462
Bbv12I GWGCWC 3 cut(s) 104, 896, 976
BbvI GCAGC 5 cut(s) 226, 1057, 1391, 1627, 1665
BccI CCATC 9 cut(s) 25, 347, 534, 790, 815, 1019, 1301, 1457, 1978
BceAI ACGGC 1 cut(s) 1785
BcgI CGANNNNNNTGC 2 cut(s) 312, 346
BciT130I CCWGG 5 cut(s) 351, 447, 645, 1545, 1890
BciVI GTATCC 1 cut(s) 882
BcnI CCSGG 4 cut(s) 63, 64, 427, 1920
BcoDI GTCTC 2 cut(s) 227, 1794
BcuI ACTAGT 1 cut(s) 170
BfaI CTAG 3 cut(s) 57, 171, 1367
BfmI CTRYAG 1 cut(s) 813
BfuI GTATCC 1 cut(s) 882
BglI GCCNNNNNGGC 1 cut(s) 1662
BglII AGATCT 1 cut(s) 608
BisI GCNGC 9 cut(s) 240, 1006, 1071, 1380, 1641, 1654, 1693, 1704, 1745
BlsI GCNGC 9 cut(s) 241, 1007, 1072, 1381, 1642, 1655, 1694, 1705, 1746
Bme1390I CCNGG 9 cut(s) 63, 64, 351, 427, 447, 645, 1545, 1890, 1920
Bme18I GGWCC 1 cut(s) 1829
BmeT110I CYCGRG 1 cut(s) 62
BmgT120I GGNCC 1 cut(s) 1829
BmiI GGNNCC 3 cut(s) 45, 1830, 1989
BmrFI CCNGG 9 cut(s) 63, 64, 351, 427, 447, 645, 1545, 1890, 1920
BmsI GCATC 4 cut(s) 521, 1005, 1222, 1962
BpiI GAAGAC 2 cut(s) 171, 462
BplI GAGNNNNNCTC 4 cut(s) 86, 118, 207, 239
BpmI CTGGAG 2 cut(s) 853, 1527
Bpu10I CCTNAGC 2 cut(s) 356, 1009
BpuMI CCSGG 4 cut(s) 63, 64, 427, 1920
BsaAI YACGTR 2 cut(s) 1412, 1751
BsaBI GATNNNNATC 1 cut(s) 1467
BsaHI GRCGYC 1 cut(s) 1632
BsaI GGTCTC 1 cut(s) 227
BsaJI CCNNGG 6 cut(s) 62, 263, 559, 750, 1517, 1657
BsaWI WCCGGW 4 cut(s) 1190, 1865, 1948, 2002
BsaXI ACNNNNNCTCC 2 cut(s) 27, 57
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 425, 1751, 1826, 1838
Bse118I RCCGGY 3 cut(s) 1865, 1948, 2002
Bse1I ACTGG 2 cut(s) 738, 836
Bse3DI GCAATG 3 cut(s) 211, 1123, 1974
Bse8I GATNNNNATC 1 cut(s) 1467
BseBI CCWGG 5 cut(s) 351, 447, 645, 1545, 1890
BseDI CCNNGG 6 cut(s) 62, 263, 559, 750, 1517, 1657
BseGI GGATG 6 cut(s) 526, 826, 1020, 1553, 1962, 1989
BseJI GATNNNNATC 1 cut(s) 1467
BseLI CCNNNNNNNGG 5 cut(s) 62, 425, 1751, 1826, 1838
BseMI GCAATG 3 cut(s) 211, 1123, 1974
BseMII CTCAG 5 cut(s) 238, 267, 465, 1023, 1752
BseNI ACTGG 2 cut(s) 738, 836
BseRI GAGGAG 5 cut(s) 67, 1326, 1329, 1332, 1344
BseSI GKGCMC 1 cut(s) 896
BseXI GCAGC 5 cut(s) 226, 1057, 1391, 1627, 1665
BsgI GTGCAG 2 cut(s) 1451, 1626
Bsh1236I CGCG 2 cut(s) 786, 877
BshFI GGCC 1 cut(s) 354
BshNI GGYRCC 1 cut(s) 43
BshTI ACCGGT 3 cut(s) 1865, 1948, 2002
BsiHKAI GWGCWC 3 cut(s) 104, 896, 976
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 7 cut(s) 63, 426, 1191, 1866, 1919, 1949, 2003
BslFI GGGAC 5 cut(s) 45, 79, 1291, 1619, 1788
BslI CCNNNNNNNGG 5 cut(s) 62, 425, 1751, 1826, 1838
BsmAI GTCTC 2 cut(s) 227, 1794
BsmFI GGGAC 5 cut(s) 45, 79, 1291, 1619, 1788
BsnI GGCC 1 cut(s) 354
Bso31I GGTCTC 1 cut(s) 227
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 3 cut(s) 104, 896, 976
Bsp1407I TGTACA 1 cut(s) 1550
BspANI GGCC 1 cut(s) 354
BspCNI CTCAG 5 cut(s) 237, 268, 466, 1022, 1751
BspFNI CGCG 2 cut(s) 786, 877
BspHI TCATGA 2 cut(s) 1582, 2040
BspLI GGNNCC 3 cut(s) 45, 1830, 1989
BspMAI CTGCAG 1 cut(s) 817
BspPI GGATC 5 cut(s) 762, 1147, 1180, 1208, 1402
BspQI GCTCTTC 2 cut(s) 92, 768
BspT107I GGYRCC 1 cut(s) 43
BspTNI GGTCTC 1 cut(s) 227
BsrBI CCGCTC 1 cut(s) 1008
BsrDI GCAATG 3 cut(s) 211, 1123, 1974
BsrFI RCCGGY 3 cut(s) 1865, 1948, 2002
BsrGI TGTACA 1 cut(s) 1550
BsrI ACTGG 2 cut(s) 738, 836
BssAI RCCGGY 3 cut(s) 1865, 1948, 2002
BssECI CCNNGG 6 cut(s) 62, 263, 559, 750, 1517, 1657
BssNI GRCGYC 1 cut(s) 1632
BssT1I CCWWGG 3 cut(s) 263, 559, 1517
Bst2UI CCWGG 5 cut(s) 351, 447, 645, 1545, 1890
Bst4CI ACNGT 4 cut(s) 751, 1555, 1685, 1730
Bst6I CTCTTC 5 cut(s) 87, 92, 349, 768, 1128
BstACI GRCGYC 1 cut(s) 1632
BstAUI TGTACA 1 cut(s) 1550
BstBAI YACGTR 2 cut(s) 1412, 1751
BstC8I GCNNGC 3 cut(s) 813, 1475, 1645
BstDEI CTNAG 7 cut(s) 224, 276, 356, 474, 1009, 1738, 2055
BstDSI CCRYGG 2 cut(s) 750, 1657
BstF5I GGATG 6 cut(s) 526, 826, 1020, 1553, 1962, 1989
BstFNI CGCG 2 cut(s) 786, 877
BstHHI GCGC 1 cut(s) 811
BstMAI GTCTC 2 cut(s) 227, 1794
BstMWI GCNNNNNNNGC 6 cut(s) 245, 806, 1379, 1653, 1662, 1924
BstNI CCWGG 5 cut(s) 351, 447, 645, 1545, 1890
BstNSI RCATGY 1 cut(s) 1568
BstSCI CCNGG 9 cut(s) 61, 62, 349, 425, 445, 643, 1543, 1888, 1918
BstSFI CTRYAG 1 cut(s) 813
BstSLI GKGCMC 1 cut(s) 896
BstUI CGCG 2 cut(s) 786, 877
BstV1I GCAGC 5 cut(s) 226, 1057, 1391, 1627, 1665
BstV2I GAAGAC 2 cut(s) 171, 462
BstX2I RGATCY 2 cut(s) 608, 1139
BstYI RGATCY 2 cut(s) 608, 1139
BsuI GTATCC 1 cut(s) 882
BsuRI GGCC 1 cut(s) 354
BtgI CCRYGG 2 cut(s) 750, 1657
BtsCI GGATG 6 cut(s) 526, 826, 1020, 1553, 1962, 1989
BtsIMutI CAGTG 3 cut(s) 232, 273, 1560
Cac8I GCNNGC 3 cut(s) 813, 1475, 1645
CciI TCATGA 2 cut(s) 1582, 2040
CfoI GCGC 1 cut(s) 811
Cfr10I RCCGGY 3 cut(s) 1865, 1948, 2002
Cfr13I GGNCC 1 cut(s) 1829
Cfr9I CCCGGG 1 cut(s) 62
CseI GACGC 1 cut(s) 792
Csp6I GTAC 1 cut(s) 1551
CspAI ACCGGT 3 cut(s) 1865, 1948, 2002
CviAII CATG 6 cut(s) 140, 1283, 1565, 1583, 1628, 2041
CviQI GTAC 1 cut(s) 1551
DdeI CTNAG 7 cut(s) 224, 276, 356, 474, 1009, 1738, 2055
DrdI GACNNNNNNGTC 1 cut(s) 1769
DseDI GACNNNNNNGTC 1 cut(s) 1769
Eam1104I CTCTTC 5 cut(s) 87, 92, 349, 768, 1128
EarI CTCTTC 5 cut(s) 87, 92, 349, 768, 1128
Ecl136II GAGCTC 2 cut(s) 102, 974
Eco130I CCWWGG 3 cut(s) 263, 559, 1517
Eco24I GRGCYC 2 cut(s) 104, 976
Eco31I GGTCTC 1 cut(s) 227
Eco47I GGWCC 1 cut(s) 1829
Eco53kI GAGCTC 2 cut(s) 102, 974
Eco72I CACGTG 1 cut(s) 1751
Eco88I CYCGRG 1 cut(s) 62
EcoICRI GAGCTC 2 cut(s) 102, 974
EcoO109I RGGNCCY 1 cut(s) 1829
EcoRII CCWGG 5 cut(s) 349, 445, 643, 1543, 1888
EcoT14I CCWWGG 3 cut(s) 263, 559, 1517
EcoT22I ATGCAT 1 cut(s) 466
EcoT38I GRGCYC 2 cut(s) 104, 976
ErhI CCWWGG 3 cut(s) 263, 559, 1517
FaeI CATG 6 cut(s) 143, 1286, 1568, 1586, 1631, 2044
FalI AAGNNNNNCTT 4 cut(s) 529, 561, 1279, 1311
FaqI GGGAC 5 cut(s) 45, 79, 1291, 1619, 1788
FatI CATG 6 cut(s) 139, 1282, 1564, 1582, 1627, 2040
FauI CCCGC 1 cut(s) 1645
Fnu4HI GCNGC 9 cut(s) 240, 1006, 1071, 1380, 1641, 1654, 1693, 1704, 1745
FokI GGATG 6 cut(s) 513, 833, 1027, 1560, 1969, 1996
FriOI GRGCYC 2 cut(s) 104, 976
Fsp4HI GCNGC 9 cut(s) 240, 1006, 1071, 1380, 1641, 1654, 1693, 1704, 1745
FspBI CTAG 3 cut(s) 57, 171, 1367
GlaI GCGC 1 cut(s) 810
GluI GCNGC 9 cut(s) 240, 1006, 1071, 1380, 1641, 1654, 1693, 1704, 1745
GsuI CTGGAG 2 cut(s) 853, 1527
HaeIII GGCC 1 cut(s) 354
HapII CCGG 7 cut(s) 63, 426, 1191, 1866, 1919, 1949, 2003
HgaI GACGC 1 cut(s) 792
HhaI GCGC 1 cut(s) 811
Hin1I GRCGYC 1 cut(s) 1632
Hin1II CATG 6 cut(s) 143, 1286, 1568, 1586, 1631, 2044
Hin6I GCGC 1 cut(s) 809
HinP1I GCGC 1 cut(s) 809
HincII GTYRAC 1 cut(s) 1450
HindII GTYRAC 1 cut(s) 1450
HindIII AAGCTT 1 cut(s) 1371
HpaII CCGG 7 cut(s) 63, 426, 1191, 1866, 1919, 1949, 2003
HphI GGTGA 6 cut(s) 800, 925, 1223, 1682, 1706, 1922
Hpy166II GTNNAC 2 cut(s) 894, 1450
Hpy188I TCNGA 8 cut(s) 475, 652, 721, 1348, 1491, 1741, 2011, 2058
Hpy188III TCNNGA 9 cut(s) 116, 537, 743, 761, 1170, 1457, 1583, 2016, 2041
Hpy8I GTNNAC 2 cut(s) 894, 1450
HpyAV CCTTC 8 cut(s) 329, 423, 935, 1328, 1353, 1607, 1845, 1858
HpyCH4III ACNGT 4 cut(s) 751, 1555, 1685, 1730
HpyCH4IV ACGT 5 cut(s) 109, 1076, 1411, 1632, 1750
HpyF10VI GCNNNNNNNGC 6 cut(s) 245, 806, 1379, 1653, 1662, 1924
HpyF3I CTNAG 7 cut(s) 224, 276, 356, 474, 1009, 1738, 2055
HpySE526I ACGT 5 cut(s) 109, 1076, 1411, 1632, 1750
Hsp92I GRCGYC 1 cut(s) 1632
Hsp92II CATG 6 cut(s) 143, 1286, 1568, 1586, 1631, 2044
HspAI GCGC 1 cut(s) 809
LguI GCTCTTC 2 cut(s) 92, 768
LmnI GCTCC 5 cut(s) 265, 509, 671, 971, 1546
Lsp1109I GCAGC 5 cut(s) 226, 1057, 1391, 1627, 1665
LweI GCATC 4 cut(s) 521, 1005, 1222, 1962
MaeI CTAG 3 cut(s) 57, 171, 1367
MaeII ACGT 5 cut(s) 109, 1076, 1411, 1632, 1750
MaeIII GTNAC 7 cut(s) 593, 724, 944, 1301, 1679, 1685, 1771
MbiI CCGCTC 1 cut(s) 1008
MflI RGATCY 2 cut(s) 608, 1139
MhlI GDGCHC 3 cut(s) 104, 896, 976
MluCI AATT 4 cut(s) 234, 431, 904, 1176
MlyI GAGTC 3 cut(s) 305, 1214, 1358
MmeI TCCRAC 1 cut(s) 443
Mph1103I ATGCAT 1 cut(s) 466
MroXI GAANNNNTTC 1 cut(s) 1291
MseI TTAA 5 cut(s) 255, 335, 453, 987, 1875
MslI CAYNNNNRTG 2 cut(s) 1287, 1626
MspA1I CMGCKG 2 cut(s) 1640, 1692
MspI CCGG 7 cut(s) 63, 426, 1191, 1866, 1919, 1949, 2003
MspR9I CCNGG 9 cut(s) 63, 64, 351, 427, 447, 645, 1545, 1890, 1920
MvaI CCWGG 5 cut(s) 351, 447, 645, 1545, 1890
MvnI CGCG 2 cut(s) 786, 877
MwoI GCNNNNNNNGC 6 cut(s) 245, 806, 1379, 1653, 1662, 1924
NciI CCSGG 4 cut(s) 63, 64, 427, 1920
NlaIII CATG 6 cut(s) 143, 1286, 1568, 1586, 1631, 2044
NlaIV GGNNCC 3 cut(s) 45, 1830, 1989
NmuCI GTSAC 3 cut(s) 724, 944, 1771
NsiI ATGCAT 1 cut(s) 466
NspI RCATGY 1 cut(s) 1568
PagI TCATGA 2 cut(s) 1582, 2040
PciI ACATGT 1 cut(s) 1564
PciSI GCTCTTC 2 cut(s) 92, 768
PdmI GAANNNNTTC 1 cut(s) 1291
PfeI GAWTC 9 cut(s) 136, 191, 377, 791, 1064, 1149, 1343, 1758, 2012
PfoI TCCNGGA 1 cut(s) 1543
PinAI ACCGGT 3 cut(s) 1865, 1948, 2002
PkrI GCNGC 9 cut(s) 241, 1007, 1072, 1381, 1642, 1655, 1694, 1705, 1746
PleI GAGTC 3 cut(s) 305, 1213, 1357
PmaCI CACGTG 1 cut(s) 1751
PmlI CACGTG 1 cut(s) 1751
PpsI GAGTC 3 cut(s) 305, 1213, 1357
Ppu21I YACGTR 2 cut(s) 1412, 1751
PpuMI RGGWCCY 1 cut(s) 1829
PscI ACATGT 1 cut(s) 1564
PsiI TTATAA 1 cut(s) 1601
Psp124BI GAGCTC 2 cut(s) 104, 976
Psp5II RGGWCCY 1 cut(s) 1829
Psp6I CCWGG 5 cut(s) 349, 445, 643, 1543, 1888
PspCI CACGTG 1 cut(s) 1751
PspGI CCWGG 5 cut(s) 349, 445, 643, 1543, 1888
PspN4I GGNNCC 3 cut(s) 45, 1830, 1989
PspPI GGNCC 1 cut(s) 1829
PspPPI RGGWCCY 1 cut(s) 1829
PstI CTGCAG 1 cut(s) 817
PsuI RGATCY 2 cut(s) 608, 1139
RsaI GTAC 1 cut(s) 1552
RsaNI GTAC 1 cut(s) 1551
RseI CAYNNNNRTG 2 cut(s) 1287, 1626
SacI GAGCTC 2 cut(s) 104, 976
SapI GCTCTTC 2 cut(s) 92, 768
SaqAI TTAA 5 cut(s) 255, 335, 453, 987, 1875
SatI GCNGC 9 cut(s) 240, 1006, 1071, 1380, 1641, 1654, 1693, 1704, 1745
Sau96I GGNCC 1 cut(s) 1829
SchI GAGTC 3 cut(s) 305, 1214, 1358
ScrFI CCNGG 9 cut(s) 63, 64, 351, 427, 447, 645, 1545, 1890, 1920
SduI GDGCHC 3 cut(s) 104, 896, 976
SfaNI GCATC 4 cut(s) 521, 1005, 1222, 1962
SfcI CTRYAG 1 cut(s) 813
SinI GGWCC 1 cut(s) 1829
SmaI CCCGGG 1 cut(s) 64
SmiMI CAYNNNNRTG 2 cut(s) 1287, 1626
SpeI ACTAGT 1 cut(s) 170
Sse9I AATT 4 cut(s) 234, 431, 904, 1176
SspMI CTAG 3 cut(s) 57, 171, 1367
SstI GAGCTC 2 cut(s) 104, 976
StyD4I CCNGG 9 cut(s) 61, 62, 349, 425, 445, 643, 1543, 1888, 1918
StyI CCWWGG 3 cut(s) 263, 559, 1517
TaaI ACNGT 4 cut(s) 751, 1555, 1685, 1730
TaiI ACGT 5 cut(s) 112, 1079, 1414, 1635, 1753
TaqI TCGA 9 cut(s) 104, 214, 322, 794, 1131, 1152, 1273, 1352, 1761
TasI AATT 4 cut(s) 234, 431, 904, 1176
TatI WGTACW 1 cut(s) 1550
TauI GCSGC 4 cut(s) 1008, 1695, 1706, 1747
TfiI GAWTC 9 cut(s) 136, 191, 377, 791, 1064, 1149, 1343, 1758, 2012
Tru1I TTAA 5 cut(s) 255, 335, 453, 987, 1875
Tru9I TTAA 5 cut(s) 255, 335, 453, 987, 1875
TscAI CASTG 3 cut(s) 232, 280, 1560
TseFI GTSAC 3 cut(s) 724, 944, 1771
TseI GCWGC 5 cut(s) 239, 1070, 1379, 1640, 1653
Tsp45I GTSAC 3 cut(s) 724, 944, 1771
TspDTI ATGAA 4 cut(s) 30, 1272, 1278, 1356
TspGWI ACGGA 3 cut(s) 858, 1585, 1674
TspMI CCCGGG 1 cut(s) 62
TspRI CASTG 3 cut(s) 232, 280, 1560
VneI GTGCAC 1 cut(s) 892
VpaK11BI GGWCC 1 cut(s) 1829
XapI RAATTY 1 cut(s) 431
XceI RCATGY 1 cut(s) 1568
XcmI CCANNNNNNNNNTGG 1 cut(s) 1664
XmaI CCCGGG 1 cut(s) 62
XmnI GAANNNNTTC 1 cut(s) 1291
XspI CTAG 3 cut(s) 57, 171, 1367
ZraI GACGTC 1 cut(s) 1633
Zsp2I ATGCAT 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.