Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0004357

Physical Location & Seq

Genomic Coordinates Forward (+)

83311972 .. 83318058

Gene Structure 6087 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG488600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGAGATCACCCACTCTTCCGCAGCAATCCTTTCCCAGCATTGCGGTGTCAGTCCACTCAGAAAACTCTTCTCAAAGTATGGAACCCACCAAAGTTCAAAATCAGAATGCAAACAATTTTCAGCTCCAGCCAGATTTTTCTCGCACATCTACTGAAAAAGATAATGGAGCAAATACAGTCTCCGCAGATCCAAGGGCTTTTGATACTGTTGGTGGCAGTACTGAACATTCTCCACCCCTTGATGAGCAACCAGAGGAAGAAGGAGATCAAAGAGGTGGTGGTGATTCCATGGCTGCTGCTGGTGGAGGTACACCATCTGAAGATGGATATAATTGGAGAAAATATGGACAAAAACAAGTAAAAGGTAGTGAGTACCCACGAAGTTATTACAAGTGCACGCATCCAAATTGTCAGGTTAAGAAAAAGGTTGAACGATCTCATGAGGGTCATATAACAGAGATCATCTACAAGGGGGCCCATAACCACCCTAAACCCCCTCCCAATCGTAGATCAGGGGCCATTGGATCATCTAACCCACTCATTGACATGCGATCGGACGTCCTTGAACAAGGCGGACCACAGACAGGTGCTGATGGTGATCTGGTTTGGGCAAGTGCACAAAAGGCAACTGGTGGAGCTCCTGATTGGAAGCATGACAACCTTGAGGTGACTTCATCAGCATCAGCGGGCCCTGACTACGGCCAGCAATCCACTTCTATGCAGGCTCAGACTGGTGCACACCTTGAATCAGGTGATGTAGTAGACGCATCATCTACCTTTTCCAATGATGAGGATGAAGATGATCGGGGAACGCATGGTAGTGTTTCATTAGCTTATGATGGTGAAGGAGATGAGTCAGAGTCGAAAAGAAGGAAAATTGAAGCCTATGCAACAGAAATGAGTGGAGCTACAAGAGCTATTCGTGAGCCTAGAGTTGTAGTCCAGACTACCAGTGAAGTAGATATACTTGATGATGGATATCGTTGGCGCAAGTATGGGCAGAAAGTAGTGAAAGGGAATCCAAATCCAAGGAGTTACTATAAATGCACCAATGCTGGTTGTACAGTGAGGAAGCATGTGGAGAGAGCATCCCATGACCTCAAGTCAGTCATCACCACATATGAAGGAAAGCACAATCATGATGTTCCCGCTGCTCGCAATAGTAGCCATGTCAATTCTGGCCCTTCTGGCAACATGTCAGGTCAAGCATCTGGCTCTGCTGCACAAACTCATCCTCATCGGCCAGAGCCATCACAAGTTCACAGTAACATGGCAAGATTTGAAAGGCCCATGTCAATGGGTTCATTCAGCTTAGCTGGAAGGCAGCAGCTGGGTCCTCCCCAGGGCTTCTCTTTTGGAATGAACCAGCCTGGCCTGGCAAATCTGGCAATGGCTGGGTTCAGTCCTGGCCAACACAAAGTGCCTGTTCTCCCTGTTCACCATCCATACTTTGCCCAACAGCGTCAGGTCAGTGAAATGGGTTTCATGTTACCAAAAGGAGAACCAAAAGTAGAGCCAATGTCAGAACCTGGCCTAAACATGAACAATGCTTCATCGGTATACCAACAACTTATGAGTAGGCTTCCCCTTGGACCACAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007163 GO:0007275 GO:0007389 GO:0008150 GO:0009266 GO:0009409 GO:0009555 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009889 GO:0009942 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

534

Amino Acids

57.83

Weight (kDa)

6.24

Isoelectric Point (pI)

53.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	107 - 163	2.3e-26	WRKY DNA -binding domain
WRKY	PF03106	324 - 381	1.7e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26440 AT5G56270
fragaria_vesca	FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430
malus_domestica	MD03G1044400.v1.1
prunus_persica	Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1
pyrus_communis	pycom03g03430
rosa_chinensis	RchiOBHm_Chr5g0074411
rosa_laevigata	RLG00000036473
rosa_multiflora	Rmu_sc0000573.1_g000009
rosa_roxburghii	Rroxscaffold_1G00007130
rosa_rugosa	Rorug05G0430900 Rorug05G0431000 Rorug05G0431100 Rorug05G0431200 Rorug05G0431300 Rorug05G0431400
rosa_samantha	Rh5AG488600 Rh5BG509400 Rh5CG533200 Rh5DG522100
rosa_wichuraiana	Rw5G045310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	561
AccI	GTMKAC	2 cut(s)	762, 1560
AciI	CCGC	6 cut(s)	20, 44, 183, 573, 686, 1149
AclWI	GGATC	2 cut(s)	182, 532
AcoI	YGGCCR	3 cut(s)	700, 1241, 1408
AcuI	CTGAAG	1 cut(s)	339
AcyI	GRCGYC	1 cut(s)	558
AdeI	CACNNNGTG	1 cut(s)	1420
AfaI	GTAC	4 cut(s)	220, 310, 374, 1063
AfiI	CCNNNNNNNGG	3 cut(s)	584, 698, 1343
AflIII	ACRYGT	1 cut(s)	1194
AgsI	TTSAA	6 cut(s)	98, 431, 566, 746, 881, 1283
AhdI	GACNNNNNGTC	1 cut(s)	1102
AjnI	CCWGG	5 cut(s)	1341, 1369, 1374, 1405, 1528
AluBI	AGCT	8 cut(s)	124, 638, 833, 908, 917, 1311, 1316, 1330
AluI	AGCT	8 cut(s)	124, 638, 833, 908, 917, 1311, 1316, 1330
Alw21I	GWGCWC	4 cut(s)	398, 619, 640, 739
Alw26I	GTCTC	1 cut(s)	184
Alw44I	GTGCAC	3 cut(s)	394, 615, 735
AlwI	GGATC	2 cut(s)	182, 532
AlwNI	CAGNNNCTG	3 cut(s)	590, 1330, 1529
ApaI	GGGCCC	2 cut(s)	478, 692
ApaLI	GTGCAC	3 cut(s)	394, 615, 735
ApeKI	GCWGC	7 cut(s)	22, 293, 296, 1151, 1220, 1324, 1327
AspLEI	GCGC	1 cut(s)	990
AsuHPI	GGTGA	7 cut(s)	293, 608, 679, 764, 854, 1105, 1430
AvaII	GGWCC	3 cut(s)	575, 1334, 1592
BaeGI	GKGCMC	5 cut(s)	398, 478, 619, 692, 739
BalI	TGGCCA	1 cut(s)	1410
BanII	GRGCYC	3 cut(s)	478, 640, 692
BarI	GAAGNNNNNNTAC	2 cut(s)	948, 980
Bbv12I	GWGCWC	4 cut(s)	398, 619, 640, 739
BbvI	GCAGC	7 cut(s)	34, 280, 283, 1138, 1207, 1336, 1339
BccI	CCATC	7 cut(s)	317, 322, 587, 833, 968, 1258, 1449
BceAI	ACGGC	1 cut(s)	715
BciT130I	CCWGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
BcoDI	GTCTC	1 cut(s)	184
BfaI	CTAG	1 cut(s)	930
BglI	GCCNNNNNGGC	1 cut(s)	1188
BisI	GCNGC	7 cut(s)	23, 294, 297, 1152, 1221, 1325, 1328
BlpI	GCTNAGC	1 cut(s)	1312
BlsI	GCNGC	7 cut(s)	24, 295, 298, 1153, 1222, 1326, 1329
BmcAI	AGTACT	1 cut(s)	220
Bme1390I	CCNGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
Bme18I	GGWCC	3 cut(s)	575, 1334, 1592
BmeRI	GACNNNNNGTC	1 cut(s)	1102
BmiI	GGNNCC	6 cut(s)	84, 475, 476, 517, 690, 1335
BmrFI	CCNGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
BmsI	GCATC	5 cut(s)	409, 689, 776, 1097, 1217
BpmI	CTGGAG	1 cut(s)	110
Bpu1102I	GCTNAGC	1 cut(s)	1312
BpuEI	CTTGAG	2 cut(s)	683, 1085
BsaBI	GATNNNNATC	2 cut(s)	597, 978
BsaHI	GRCGYC	1 cut(s)	558
BsaJI	CCNNGG	6 cut(s)	191, 288, 1028, 1341, 1342, 1588
Bsc4I	CCNNNNNNNGG	3 cut(s)	584, 698, 1343
Bse1I	ACTGG	3 cut(s)	634, 736, 951
Bse3DI	GCAATG	2 cut(s)	39, 1395
Bse8I	GATNNNNATC	2 cut(s)	597, 978
BseBI	CCWGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
BseDI	CCNNGG	6 cut(s)	191, 288, 1028, 1341, 1342, 1588
BseGI	GGATG	5 cut(s)	400, 799, 1088, 1231, 1441
BseJI	GATNNNNATC	2 cut(s)	597, 978
BseLI	CCNNNNNNNGG	3 cut(s)	584, 698, 1343
BseMI	GCAATG	2 cut(s)	39, 1395
BseMII	CTCAG	2 cut(s)	72, 740
BseNI	ACTGG	3 cut(s)	634, 736, 951
BseSI	GKGCMC	5 cut(s)	398, 478, 619, 692, 739
BseXI	GCAGC	7 cut(s)	34, 280, 283, 1138, 1207, 1336, 1339
BseYI	CCCAGC	3 cut(s)	35, 1330, 1394
BsgI	GTGCAG	1 cut(s)	1206
Bsh1285I	CGRYCG	1 cut(s)	554
BsiEI	CGRYCG	1 cut(s)	554
BsiHKAI	GWGCWC	4 cut(s)	398, 619, 640, 739
BslI	CCNNNNNNNGG	3 cut(s)	584, 698, 1343
BsmAI	GTCTC	1 cut(s)	184
BsmI	GAATGC	1 cut(s)	112
Bsp120I	GGGCCC	2 cut(s)	474, 688
Bsp1286I	GDGCHC	6 cut(s)	398, 478, 619, 640, 692, 739
Bsp1407I	TGTACA	1 cut(s)	1061
Bsp1720I	GCTNAGC	1 cut(s)	1312
Bsp19I	CCATGG	1 cut(s)	288
BspACI	CCGC	6 cut(s)	20, 44, 183, 573, 686, 1149
BspCNI	CTCAG	2 cut(s)	71, 739
BspHI	TCATGA	2 cut(s)	439, 1138
BspLI	GGNNCC	6 cut(s)	84, 475, 476, 517, 690, 1335
BspPI	GGATC	2 cut(s)	182, 532
BsrDI	GCAATG	2 cut(s)	39, 1395
BsrGI	TGTACA	1 cut(s)	1061
BsrI	ACTGG	3 cut(s)	634, 736, 951
BssECI	CCNNGG	6 cut(s)	191, 288, 1028, 1341, 1342, 1588
BssNAI	GTATAC	1 cut(s)	1561
BssNI	GRCGYC	1 cut(s)	558
BssT1I	CCWWGG	4 cut(s)	191, 288, 1028, 1588
Bst1107I	GTATAC	1 cut(s)	1561
Bst2UI	CCWGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
Bst4CI	ACNGT	4 cut(s)	178, 208, 1066, 1265
Bst6I	CTCTTC	2 cut(s)	21, 73
BstACI	GRCGYC	1 cut(s)	558
BstAUI	TGTACA	1 cut(s)	1061
BstC8I	GCNNGC	5 cut(s)	398, 688, 704, 723, 1156
BstDEI	CTNAG	3 cut(s)	58, 726, 1312
BstDSI	CCRYGG	1 cut(s)	288
BstF5I	GGATG	5 cut(s)	400, 799, 1088, 1231, 1441
BstHHI	GCGC	1 cut(s)	990
BstMAI	GTCTC	1 cut(s)	184
BstMCI	CGRYCG	1 cut(s)	554
BstMWI	GCNNNNNNNGC	5 cut(s)	623, 914, 1164, 1188, 1385
BstNI	CCWGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
BstNSI	RCATGY	3 cut(s)	550, 1079, 1198
BstSCI	CCNGG	5 cut(s)	1341, 1369, 1374, 1405, 1528
BstSLI	GKGCMC	5 cut(s)	398, 478, 619, 692, 739
BstV1I	GCAGC	7 cut(s)	34, 280, 283, 1138, 1207, 1336, 1339
BstX2I	RGATCY	1 cut(s)	187
BstXI	CCANNNNNNTGG	1 cut(s)	1297
BstYI	RGATCY	1 cut(s)	187
BstZ17I	GTATAC	1 cut(s)	1561
BtgI	CCRYGG	1 cut(s)	288
BtsCI	GGATG	5 cut(s)	400, 799, 1088, 1231, 1441
BtsIMutI	CAGTG	3 cut(s)	958, 1071, 1477
Cac8I	GCNNGC	5 cut(s)	398, 688, 704, 723, 1156
CaiI	CAGNNNCTG	3 cut(s)	590, 1330, 1529
CciI	TCATGA	2 cut(s)	439, 1138
CfoI	GCGC	1 cut(s)	990
CseI	GACGC	2 cut(s)	773, 1451
Csp6I	GTAC	4 cut(s)	219, 309, 373, 1062
CviQI	GTAC	4 cut(s)	219, 309, 373, 1062
DdeI	CTNAG	3 cut(s)	58, 726, 1312
DraIII	CACNNNGTG	1 cut(s)	1420
DriI	GACNNNNNGTC	1 cut(s)	1102
EaeI	YGGCCR	3 cut(s)	700, 1241, 1408
Eam1104I	CTCTTC	2 cut(s)	21, 73
Eam1105I	GACNNNNNGTC	1 cut(s)	1102
EarI	CTCTTC	2 cut(s)	21, 73
EciI	GGCGGA	1 cut(s)	588
Ecl136II	GAGCTC	1 cut(s)	638
Eco130I	CCWWGG	4 cut(s)	191, 288, 1028, 1588
Eco24I	GRGCYC	3 cut(s)	478, 640, 692
Eco32I	GATATC	1 cut(s)	980
Eco47I	GGWCC	3 cut(s)	575, 1334, 1592
Eco53kI	GAGCTC	1 cut(s)	638
Eco57I	CTGAAG	1 cut(s)	339
EcoICRI	GAGCTC	1 cut(s)	638
EcoO109I	RGGNCCY	3 cut(s)	474, 689, 1334
EcoRII	CCWGG	5 cut(s)	1341, 1369, 1374, 1405, 1528
EcoRV	GATATC	1 cut(s)	980
EcoT14I	CCWWGG	4 cut(s)	191, 288, 1028, 1588
EcoT38I	GRGCYC	3 cut(s)	478, 640, 692
ErhI	CCWWGG	4 cut(s)	191, 288, 1028, 1588
FauI	CCCGC	2 cut(s)	679, 1156
FauNDI	CATATG	1 cut(s)	1120
FblI	GTMKAC	2 cut(s)	762, 1560
Fnu4HI	GCNGC	7 cut(s)	23, 294, 297, 1152, 1221, 1325, 1328
FokI	GGATG	5 cut(s)	387, 806, 1075, 1218, 1428
FriOI	GRGCYC	3 cut(s)	478, 640, 692
Fsp4HI	GCNGC	7 cut(s)	23, 294, 297, 1152, 1221, 1325, 1328
FspBI	CTAG	1 cut(s)	930
GlaI	GCGC	1 cut(s)	989
GluI	GCNGC	7 cut(s)	23, 294, 297, 1152, 1221, 1325, 1328
GsaI	CCCAGC	3 cut(s)	39, 1334, 1398
GsuI	CTGGAG	1 cut(s)	110
HgaI	GACGC	2 cut(s)	773, 1451
HhaI	GCGC	1 cut(s)	990
Hin1I	GRCGYC	1 cut(s)	558
Hin6I	GCGC	1 cut(s)	988
HinP1I	GCGC	1 cut(s)	988
HinfI	GANTC	5 cut(s)	284, 746, 854, 860, 1018
HphI	GGTGA	7 cut(s)	293, 608, 679, 764, 854, 1105, 1430
Hpy166II	GTNNAC	9 cut(s)	55, 311, 396, 617, 737, 763, 1261, 1438, 1561
Hpy188I	TCNGA	7 cut(s)	61, 105, 319, 556, 729, 859, 1525
Hpy188III	TCNNGA	5 cut(s)	440, 641, 923, 943, 1139
Hpy8I	GTNNAC	9 cut(s)	55, 311, 396, 617, 737, 763, 1261, 1438, 1561
HpyAV	CCTTC	6 cut(s)	254, 839, 864, 1118, 1194, 1314
HpyCH4III	ACNGT	4 cut(s)	178, 208, 1066, 1265
HpyCH4IV	ACGT	1 cut(s)	558
HpyCH4V	TGCA	8 cut(s)	110, 396, 617, 721, 737, 890, 1047, 1223
HpyF10VI	GCNNNNNNNGC	5 cut(s)	623, 914, 1164, 1188, 1385
HpyF3I	CTNAG	3 cut(s)	58, 726, 1312
HpySE526I	ACGT	1 cut(s)	558
Hsp92I	GRCGYC	1 cut(s)	558
HspAI	GCGC	1 cut(s)	988
LmnI	GCTCC	5 cut(s)	129, 167, 635, 643, 905
Lsp1109I	GCAGC	7 cut(s)	34, 280, 283, 1138, 1207, 1336, 1339
LweI	GCATC	5 cut(s)	409, 689, 776, 1097, 1217
MaeI	CTAG	1 cut(s)	930
MaeII	ACGT	1 cut(s)	558
MaeIII	GTNAC	4 cut(s)	667, 1034, 1265, 1488
MboII	GAAGA	5 cut(s)	8, 60, 269, 332, 809
MflI	RGATCY	1 cut(s)	187
MhlI	GDGCHC	6 cut(s)	398, 478, 619, 640, 692, 739
MlsI	TGGCCA	1 cut(s)	1410
MluCI	AATT	5 cut(s)	115, 331, 406, 876, 1174
MluNI	TGGCCA	1 cut(s)	1410
MlyI	GAGTC	2 cut(s)	863, 869
Mox20I	TGGCCA	1 cut(s)	1410
MscI	TGGCCA	1 cut(s)	1410
MseI	TTAA	1 cut(s)	417
MslI	CAYNNNNRTG	6 cut(s)	44, 545, 716, 819, 1137, 1295
Msp20I	TGGCCA	1 cut(s)	1410
MspA1I	CMGCKG	3 cut(s)	686, 1151, 1330
MspR9I	CCNGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
Mva1269I	GAATGC	1 cut(s)	112
MvaI	CCWGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
MwoI	GCNNNNNNNGC	5 cut(s)	623, 914, 1164, 1188, 1385
NcoI	CCATGG	1 cut(s)	288
NdeI	CATATG	1 cut(s)	1120
NlaIV	GGNNCC	6 cut(s)	84, 475, 476, 517, 690, 1335
NmuCI	GTSAC	1 cut(s)	667
NspI	RCATGY	3 cut(s)	550, 1079, 1198
PagI	TCATGA	2 cut(s)	439, 1138
PasI	CCCWGGG	1 cut(s)	1342
PciI	ACATGT	1 cut(s)	1194
PctI	GAATGC	1 cut(s)	112
PfeI	GAWTC	3 cut(s)	284, 746, 1018
PkrI	GCNGC	7 cut(s)	24, 295, 298, 1153, 1222, 1326, 1329
Ple19I	CGATCG	1 cut(s)	554
PleI	GAGTC	2 cut(s)	862, 868
PpsI	GAGTC	2 cut(s)	862, 868
PpuMI	RGGWCCY	1 cut(s)	1334
PscI	ACATGT	1 cut(s)	1194
Psp124BI	GAGCTC	1 cut(s)	640
Psp5II	RGGWCCY	1 cut(s)	1334
Psp6I	CCWGG	5 cut(s)	1341, 1369, 1374, 1405, 1528
PspFI	CCCAGC	3 cut(s)	35, 1330, 1394
PspGI	CCWGG	5 cut(s)	1341, 1369, 1374, 1405, 1528
PspN4I	GGNNCC	6 cut(s)	84, 475, 476, 517, 690, 1335
PspOMI	GGGCCC	2 cut(s)	474, 688
PspPPI	RGGWCCY	1 cut(s)	1334
PstNI	CAGNNNCTG	3 cut(s)	590, 1330, 1529
PsuI	RGATCY	1 cut(s)	187
PvuI	CGATCG	1 cut(s)	554
PvuII	CAGCTG	1 cut(s)	1330
RsaI	GTAC	4 cut(s)	220, 310, 374, 1063
RsaNI	GTAC	4 cut(s)	219, 309, 373, 1062
RseI	CAYNNNNRTG	6 cut(s)	44, 545, 716, 819, 1137, 1295
SacI	GAGCTC	1 cut(s)	640
SaqAI	TTAA	1 cut(s)	417
SatI	GCNGC	7 cut(s)	23, 294, 297, 1152, 1221, 1325, 1328
ScaI	AGTACT	1 cut(s)	220
SchI	GAGTC	2 cut(s)	863, 869
ScrFI	CCNGG	5 cut(s)	1343, 1371, 1376, 1407, 1530
SduI	GDGCHC	6 cut(s)	398, 478, 619, 640, 692, 739
SfaNI	GCATC	5 cut(s)	409, 689, 776, 1097, 1217
SinI	GGWCC	3 cut(s)	575, 1334, 1592
SmiMI	CAYNNNNRTG	6 cut(s)	44, 545, 716, 819, 1137, 1295
SmlI	CTYRAG	2 cut(s)	662, 1100
SmoI	CTYRAG	2 cut(s)	662, 1100
Sse9I	AATT	5 cut(s)	115, 331, 406, 876, 1174
SsiI	CCGC	6 cut(s)	20, 44, 183, 573, 686, 1149
SspMI	CTAG	1 cut(s)	930
SstI	GAGCTC	1 cut(s)	640
StyD4I	CCNGG	5 cut(s)	1341, 1369, 1374, 1405, 1528
StyI	CCWWGG	4 cut(s)	191, 288, 1028, 1588
TaaI	ACNGT	4 cut(s)	178, 208, 1066, 1265
TaiI	ACGT	1 cut(s)	561
TaqI	TCGA	1 cut(s)	863
TasI	AATT	5 cut(s)	115, 331, 406, 876, 1174
TatI	WGTACW	2 cut(s)	218, 1061
TfiI	GAWTC	3 cut(s)	284, 746, 1018
Tru1I	TTAA	1 cut(s)	417
Tru9I	TTAA	1 cut(s)	417
TscAI	CASTG	3 cut(s)	958, 1071, 1477
TseFI	GTSAC	1 cut(s)	667
TseI	GCWGC	7 cut(s)	22, 293, 296, 1151, 1220, 1324, 1327
Tsp45I	GTSAC	1 cut(s)	667
TspDTI	ATGAA	9 cut(s)	663, 810, 816, 1137, 1293, 1376, 1474, 1542, 1556
TspRI	CASTG	3 cut(s)	958, 1071, 1477
VneI	GTGCAC	3 cut(s)	394, 615, 735
VpaK11BI	GGWCC	3 cut(s)	575, 1334, 1592
XceI	RCATGY	3 cut(s)	550, 1079, 1198
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1175
XmiI	GTMKAC	2 cut(s)	762, 1560
XspI	CTAG	1 cut(s)	930
ZraI	GACGTC	1 cut(s)	559
ZrmI	AGTACT	1 cut(s)	220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.