Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004357

Physical Location & Seq

Genomic Coordinates Forward (+)

34792747 .. 34797971

Gene Structure 5225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g41430.t8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGCTGGCATGGATGATAATGTTGCTATAATCGGAGACTGGGTGCCTCCGAGTCCAAGCCCAAGAGACTTCTTCTCTTCAATGTTAGTTGATGGCATTGGCTCAAGGTCATTCTTGGATTCTCCTAACAGTAATAAAGCTGAGGACTTCTTCCTGGGGTCTCGAGAAGGAAGTACCAGTGGAAAGAATCTATCGCAAGGAAATGGTACCGGTGATGAAATAACTGAAATGGGTTCATTTTCAGAGTACAAGTCTAACACACGTGGGGGACTAGTGGAAAGGATTGCAGCCAGAGCTGGTTTTAATGCTCCGCGGTTGAATACAGAAAGCATTAGATCTTCTGACCTTTCACTTAGTTCTGATGTTCGGTCTCCTTATCTGACAATACCCCCTGGTCTCAGTCCAACCACACTGCTGGACTCTCCTGTCTTCCTTTCGAATTCATTGGCACAGCCTTCTCCAACAACTGGAAAATTTCCATTTGTCTCAAATGGTCACGGCAGGAATTGCACATTGATGACAGAGGCTGCTGATAAAGCAAACTTCTTTGAGGACTTGAATTCCTCGTTTGCTTTCAAGCCTCTTGGCGAATCAGGCTCTTTCTTTCTTGGTCCAACAAGCAAGCGAACTTTTCCCAGCATCGAGGTTTCAGTCCAGTCAGAAAACTCTTCTCAAAATATGGAACCCACCAAAGTTCAAAATCAGAATGCAAACAATTTTCAGCTCCAGCCAGATTTTTCTCGCACATCTACTGAAAAAGATAACGGAGCAAATACAGTCTCTGCCGATCCTAGGGGTTTTGATACAGTTGGTGGCAGTACCGAACATTCTCCACCTCCTGATGAGCAACCAGAGGAAGAAGGAGATCAAAGAGGTGGTGGTGATTCCATGGCTGCTACTGGTGGAGGTACACCATCTGAAGATGGATATAATTGGAGAAAATATGGACAAAAACAAGTAAAAGGTAGTGAGTACCCTCGAAGTTATTACAAGTGCACGCATCCCAATTGTCAGGTTAAGAAAAAGGTTGAGCGATCTCATGAGGGTCATATAACAGAGATCATCTACAAAGGGGCCCATAACCACCCTAAACCCCCTCCCAATCGTAGATCAGGGGCCATTGGGTCATCTAACCCACTCATTGACATGCGATCAGATGTCCTTCAACAAGGCGGACCACAGACAGGTGCTGATGGTGATCTAGTTTGGGCAAGTGCACAAAAGGCAACCGGTGGAGCTCCTGATTGGAAGCATGATAACCTTGAGGTGACTTCATCAGCATCAGCAGGCCCTGACTATGGCCAGCAGTCCACTTCTATGCAGGCTCAGAATGGTGCACACCTTGAATCAGGTGATGTAGTAGACGCATCATCTACCTTTTCCAATGATGAGGATGAAGATGATCGAGGAACGCACGGTAGTGTTTCATTAGTTTATGATGGTGAAGGAGATGAGTCAGAGTCAAAAAGAAGGAAAATTGAAGCCTATGCAACAGAAATGAGTGGAGCAACCAGAGCTATTCGCGAGCCTAGAGTCGTTGTCCAGACTACGAGTGAAGTTGATATCCTTGATGACGGATATCGTTGGCGCAAGTATGGGCAGAAAGTAGTGAAAGGGAATCCAAATCCAAGGAGCTACTATAAGTGCACCAATGCTGGTTGTACAGTGAGGAAGCATGTGGAGAGAGCATCACATGACCTAAAGTCAGTCATCACCACATATGAAGGAAAACACAATCATGATGTTCCGGCTGCTCGCAATAGTAGCCATGTCAATTCTGGCCCTTCTGGCAACATGCCGGGTCAGGTGTCTGGGTCTGCAACACAAACGCATCCTCATCGGCCAGAGCCATCACAAGTTCACAATAGCATGGCAAGATTTGAAAGGCCGATGTCAATGGGTTCATTCAGCTTACCTGGAAGGCAGCAGCTGGGTCCTCCCCAGGGCTTCTCTTTCGGAATGAACCAGCCTGGCCTGGCCAATCTGGCAATGGCCGGGTTTGGTCCTGGCCAACACAAAGTCCCTGTTCTACCAGTTCATCATCCATACTTTGCACAACAGCGTCAGGTCAGTGAAATGGGTTTCATGTTACCAAAAGGAGAACCAAAAGTAGAGCCAATATCAGAACCTGGTCTAAACATGTCCAATGCTTCATCGGTATACCAACAACTTATGAGTAGGCTTCCCCTCGGACCACAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007163 GO:0007275 GO:0007389 GO:0008150 GO:0009266 GO:0009409 GO:0009555 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009889 GO:0009942 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

735

Amino Acids

79.16

Weight (kDa)

5.87

Isoelectric Point (pI)

51.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	307 - 363	2.2e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26440 AT5G56270
fragaria_vesca	FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430
malus_domestica	MD03G1044400.v1.1
prunus_persica	Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1
pyrus_communis	pycom03g03430
rosa_chinensis	RchiOBHm_Chr5g0074411
rosa_laevigata	RLG00000036473
rosa_multiflora	Rmu_sc0000573.1_g000009
rosa_roxburghii	Rroxscaffold_1G00007130
rosa_rugosa	Rorug05G0430900 Rorug05G0431000 Rorug05G0431100 Rorug05G0431200 Rorug05G0431300 Rorug05G0431400
rosa_samantha	Rh5AG488600 Rh5BG509400 Rh5CG533200 Rh5DG522100
rosa_wichuraiana	Rw5G045310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	425
Acc65I	GGTACC	1 cut(s)	206
AccB1I	GGYRCC	2 cut(s)	43, 206
AccB7I	CCANNNNNTGG	1 cut(s)	467
AccI	GTMKAC	2 cut(s)	1362, 2160
AccII	CGCG	2 cut(s)	313, 1524
AciI	CCGC	3 cut(s)	311, 313, 1173
AclWI	GGATC	1 cut(s)	782
AcoI	YGGCCR	5 cut(s)	1300, 1841, 1977, 1992, 2008
AcsI	RAATTY	3 cut(s)	439, 473, 559
AcuI	CTGAAG	1 cut(s)	939
AcvI	CACGTG	1 cut(s)	263
AfaI	GTAC	7 cut(s)	175, 208, 248, 820, 910, 974, 1663
AfiI	CCNNNNNNNGG	5 cut(s)	467, 792, 1184, 1298, 1943
AflIII	ACRYGT	2 cut(s)	260, 2139
AgeI	ACCGGT	2 cut(s)	209, 1229
AgsI	TTSAA	9 cut(s)	81, 319, 559, 577, 698, 1166, 1346, 1481, 1883
AhdI	GACNNNNNGTC	1 cut(s)	1702
AhlI	ACTAGT	1 cut(s)	271
AjnI	CCWGG	8 cut(s)	153, 391, 1915, 1941, 1969, 1974, 2005, 2128
AleI	CACNNNNGTG	1 cut(s)	1419
AluBI	AGCT	8 cut(s)	140, 296, 724, 1238, 1517, 1635, 1911, 1930
AluI	AGCT	8 cut(s)	140, 296, 724, 1238, 1517, 1635, 1911, 1930
Alw21I	GWGCWC	5 cut(s)	998, 1219, 1240, 1339, 1649
Alw26I	GTCTC	7 cut(s)	30, 60, 165, 375, 401, 490, 784
Alw44I	GTGCAC	4 cut(s)	994, 1215, 1335, 1645
AlwI	GGATC	1 cut(s)	782
AlwNI	CAGNNNCTG	6 cut(s)	527, 782, 1190, 1292, 1930, 2129
Ama87I	CYCGRG	1 cut(s)	162
ApaI	GGGCCC	1 cut(s)	1078
ApaLI	GTGCAC	4 cut(s)	994, 1215, 1335, 1645
ApeKI	GCWGC	6 cut(s)	287, 527, 893, 1751, 1924, 1927
ApoI	RAATTY	3 cut(s)	439, 473, 559
AsiGI	ACCGGT	2 cut(s)	209, 1229
Asp718I	GGTACC	1 cut(s)	206
AspA2I	CCTAGG	1 cut(s)	791
AspLEI	GCGC	1 cut(s)	1590
AsuC2I	CCSGG	2 cut(s)	1800, 1996
AsuHPI	GGTGA	7 cut(s)	224, 893, 1208, 1279, 1364, 1454, 1705
AsuII	TTCGAA	1 cut(s)	437
AvaI	CYCGRG	1 cut(s)	162
AvaII	GGWCC	5 cut(s)	611, 1175, 1934, 2003, 2192
AvrII	CCTAGG	1 cut(s)	791
BaeGI	GKGCMC	5 cut(s)	998, 1078, 1219, 1339, 1649
BalI	TGGCCA	3 cut(s)	1302, 1979, 2010
BanI	GGYRCC	2 cut(s)	43, 206
BanII	GRGCYC	2 cut(s)	1078, 1240
BbrPI	CACGTG	1 cut(s)	263
BbsI	GAAGAC	1 cut(s)	421
Bbv12I	GWGCWC	5 cut(s)	998, 1219, 1240, 1339, 1649
BbvCI	CCTCAGC	1 cut(s)	141
BbvI	GCAGC	6 cut(s)	299, 514, 880, 1738, 1936, 1939
BccI	CCATC	6 cut(s)	86, 917, 922, 1187, 1433, 1858
BceAI	ACGGC	1 cut(s)	514
BcgI	CGANNNNNNTGC	2 cut(s)	1820, 1854
BciT130I	CCWGG	8 cut(s)	155, 393, 1917, 1943, 1971, 1976, 2007, 2130
BcnI	CCSGG	2 cut(s)	1800, 1996
BcoDI	GTCTC	7 cut(s)	30, 60, 165, 375, 401, 490, 784
BcuI	ACTAGT	1 cut(s)	271
BfaI	CTAG	4 cut(s)	272, 792, 1202, 1530
BglI	GCCNNNNNGGC	2 cut(s)	1788, 1985
BglII	AGATCT	1 cut(s)	335
BisI	GCNGC	6 cut(s)	288, 528, 894, 1752, 1925, 1928
BlnI	CCTAGG	1 cut(s)	791
BlsI	GCNGC	6 cut(s)	289, 529, 895, 1753, 1926, 1929
Bme18I	GGWCC	5 cut(s)	611, 1175, 1934, 2003, 2192
BmeRI	GACNNNNNGTC	1 cut(s)	1702
BmeT110I	CYCGRG	1 cut(s)	162
BmiI	GGNNCC	7 cut(s)	45, 208, 684, 1075, 1076, 1117, 1935
BmrI	ACTGGG	1 cut(s)	49
BmsI	GCATC	6 cut(s)	648, 1009, 1289, 1376, 1697, 1840
BmuI	ACTGGG	1 cut(s)	49
BpiI	GAAGAC	1 cut(s)	421
BpmI	CTGGAG	1 cut(s)	710
Bpu10I	CCTNAGC	1 cut(s)	141
Bpu14I	TTCGAA	1 cut(s)	437
BpuEI	CTTGAG	2 cut(s)	88, 1283
BpuMI	CCSGG	2 cut(s)	1800, 1996
BsaAI	YACGTR	1 cut(s)	263
BsaBI	GATNNNNATC	1 cut(s)	1197
BsaI	GGTCTC	3 cut(s)	165, 375, 401
BsaJI	CCNNGG	9 cut(s)	154, 311, 391, 791, 888, 1628, 1941, 1942, 2188
BsaWI	WCCGGW	2 cut(s)	209, 1229
BsaXI	ACNNNNNCTCC	2 cut(s)	27, 57
Bsc4I	CCNNNNNNNGG	5 cut(s)	467, 792, 1184, 1298, 1943
Bse118I	RCCGGY	2 cut(s)	209, 1229
Bse1I	ACTGG	6 cut(s)	44, 177, 472, 655, 904, 2033
Bse3DI	GCAATG	1 cut(s)	1995
Bse8I	GATNNNNATC	1 cut(s)	1197
BseBI	CCWGG	8 cut(s)	155, 393, 1917, 1943, 1971, 1976, 2007, 2130
BseDI	CCNNGG	9 cut(s)	154, 311, 391, 791, 888, 1628, 1941, 1942, 2188
BseGI	GGATG	5 cut(s)	19, 1000, 1399, 1831, 2041
BseJI	GATNNNNATC	1 cut(s)	1197
BseLI	CCNNNNNNNGG	5 cut(s)	467, 792, 1184, 1298, 1943
BseMI	GCAATG	1 cut(s)	1995
BseMII	CTCAG	3 cut(s)	132, 412, 1340
BseNI	ACTGG	6 cut(s)	44, 177, 472, 655, 904, 2033
BseSI	GKGCMC	5 cut(s)	998, 1078, 1219, 1339, 1649
BseXI	GCAGC	6 cut(s)	299, 514, 880, 1738, 1936, 1939
BseYI	CCCAGC	2 cut(s)	635, 1930
Bsh1236I	CGCG	2 cut(s)	313, 1524
BshNI	GGYRCC	2 cut(s)	43, 206
BshTI	ACCGGT	2 cut(s)	209, 1229
BsiHKAI	GWGCWC	5 cut(s)	998, 1219, 1240, 1339, 1649
BsiHKCI	CYCGRG	1 cut(s)	162
BsiSI	CCGG	5 cut(s)	210, 1230, 1748, 1799, 1995
BslFI	GGGAC	2 cut(s)	282, 2006
BslI	CCNNNNNNNGG	5 cut(s)	467, 792, 1184, 1298, 1943
BsmAI	GTCTC	7 cut(s)	30, 60, 165, 375, 401, 490, 784
BsmFI	GGGAC	2 cut(s)	282, 2006
BsmI	GAATGC	1 cut(s)	712
Bso31I	GGTCTC	3 cut(s)	165, 375, 401
BsoBI	CYCGRG	1 cut(s)	162
Bsp119I	TTCGAA	1 cut(s)	437
Bsp120I	GGGCCC	1 cut(s)	1074
Bsp1286I	GDGCHC	6 cut(s)	998, 1078, 1219, 1240, 1339, 1649
Bsp1407I	TGTACA	1 cut(s)	1661
Bsp143I	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
Bsp19I	CCATGG	1 cut(s)	888
Bsp68I	TCGCGA	1 cut(s)	1524
BspACI	CCGC	3 cut(s)	311, 313, 1173
BspCNI	CTCAG	3 cut(s)	133, 411, 1339
BspFNI	CGCG	2 cut(s)	313, 1524
BspHI	TCATGA	2 cut(s)	1039, 1738
BspLI	GGNNCC	7 cut(s)	45, 208, 684, 1075, 1076, 1117, 1935
BspPI	GGATC	1 cut(s)	782
BspT104I	TTCGAA	1 cut(s)	437
BspT107I	GGYRCC	2 cut(s)	43, 206
BspTNI	GGTCTC	3 cut(s)	165, 375, 401
BsrDI	GCAATG	1 cut(s)	1995
BsrFI	RCCGGY	2 cut(s)	209, 1229
BsrGI	TGTACA	1 cut(s)	1661
BsrI	ACTGG	6 cut(s)	44, 177, 472, 655, 904, 2033
BssAI	RCCGGY	2 cut(s)	209, 1229
BssECI	CCNNGG	9 cut(s)	154, 311, 391, 791, 888, 1628, 1941, 1942, 2188
BssMI	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
BssNAI	GTATAC	1 cut(s)	2161
BssT1I	CCWWGG	3 cut(s)	791, 888, 1628
Bst1107I	GTATAC	1 cut(s)	2161
Bst2UI	CCWGG	8 cut(s)	155, 393, 1917, 1943, 1971, 1976, 2007, 2130
Bst4CI	ACNGT	5 cut(s)	131, 778, 808, 1418, 1666
Bst6I	CTCTTC	2 cut(s)	82, 673
BstAPI	GCANNNNNTGC	1 cut(s)	507
BstAUI	TGTACA	1 cut(s)	1661
BstBAI	YACGTR	1 cut(s)	263
BstBI	TTCGAA	1 cut(s)	437
BstC8I	GCNNGC	8 cut(s)	7, 623, 998, 1288, 1304, 1323, 1526, 1756
BstDEI	CTNAG	4 cut(s)	141, 353, 398, 1326
BstDSI	CCRYGG	2 cut(s)	311, 888
BstF5I	GGATG	5 cut(s)	19, 1000, 1399, 1831, 2041
BstFNI	CGCG	2 cut(s)	313, 1524
BstHHI	GCGC	1 cut(s)	1590
BstKTI	GATC	9 cut(s)	338, 790, 868, 1037, 1062, 1112, 1154, 1201, 1405
BstMAI	GTCTC	7 cut(s)	30, 60, 165, 375, 401, 490, 784
BstMBI	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
BstMWI	GCNNNNNNNGC	9 cut(s)	293, 507, 536, 594, 1223, 1514, 1764, 1788, 1985
BstNI	CCWGG	8 cut(s)	155, 393, 1917, 1943, 1971, 1976, 2007, 2130
BstNSI	RCATGY	4 cut(s)	1150, 1679, 1798, 2143
BstSLI	GKGCMC	5 cut(s)	998, 1078, 1219, 1339, 1649
BstUI	CGCG	2 cut(s)	313, 1524
BstV1I	GCAGC	6 cut(s)	299, 514, 880, 1738, 1936, 1939
BstV2I	GAAGAC	1 cut(s)	421
BstX2I	RGATCY	1 cut(s)	335
BstXI	CCANNNNNNTGG	1 cut(s)	415
BstYI	RGATCY	1 cut(s)	335
BstZ17I	GTATAC	1 cut(s)	2161
BtgI	CCRYGG	2 cut(s)	311, 888
BtsCI	GGATG	5 cut(s)	19, 1000, 1399, 1831, 2041
BtsI	GCAGTG	1 cut(s)	410
BtsIMutI	CAGTG	4 cut(s)	184, 410, 1671, 2077
BtuMI	TCGCGA	1 cut(s)	1524
Cac8I	GCNNGC	8 cut(s)	7, 623, 998, 1288, 1304, 1323, 1526, 1756
CaiI	CAGNNNCTG	6 cut(s)	527, 782, 1190, 1292, 1930, 2129
CciI	TCATGA	2 cut(s)	1039, 1738
CfoI	GCGC	1 cut(s)	1590
Cfr10I	RCCGGY	2 cut(s)	209, 1229
Cfr42I	CCGCGG	1 cut(s)	314
CseI	GACGC	2 cut(s)	1373, 2051
CsiI	ACCWGGT	1 cut(s)	2128
Csp6I	GTAC	7 cut(s)	174, 207, 247, 819, 909, 973, 1662
CspAI	ACCGGT	2 cut(s)	209, 1229
CviQI	GTAC	7 cut(s)	174, 207, 247, 819, 909, 973, 1662
DdeI	CTNAG	4 cut(s)	141, 353, 398, 1326
DpnI	GATC	9 cut(s)	337, 789, 867, 1036, 1061, 1111, 1153, 1200, 1404
DpnII	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
DrdI	GACNNNNNNGTC	1 cut(s)	425
DriI	GACNNNNNGTC	1 cut(s)	1702
DseDI	GACNNNNNNGTC	1 cut(s)	425
EaeI	YGGCCR	5 cut(s)	1300, 1841, 1977, 1992, 2008
Eam1104I	CTCTTC	2 cut(s)	82, 673
Eam1105I	GACNNNNNGTC	1 cut(s)	1702
EarI	CTCTTC	2 cut(s)	82, 673
EciI	GGCGGA	1 cut(s)	1188
Ecl136II	GAGCTC	1 cut(s)	1238
Eco130I	CCWWGG	3 cut(s)	791, 888, 1628
Eco24I	GRGCYC	2 cut(s)	1078, 1240
Eco31I	GGTCTC	3 cut(s)	165, 375, 401
Eco32I	GATATC	2 cut(s)	1564, 1580
Eco47I	GGWCC	5 cut(s)	611, 1175, 1934, 2003, 2192
Eco53kI	GAGCTC	1 cut(s)	1238
Eco57I	CTGAAG	1 cut(s)	939
Eco72I	CACGTG	1 cut(s)	263
Eco88I	CYCGRG	1 cut(s)	162
EcoICRI	GAGCTC	1 cut(s)	1238
EcoO109I	RGGNCCY	3 cut(s)	1074, 1289, 1934
EcoRI	GAATTC	2 cut(s)	439, 559
EcoRII	CCWGG	8 cut(s)	153, 391, 1915, 1941, 1969, 1974, 2005, 2128
EcoRV	GATATC	2 cut(s)	1564, 1580
EcoT14I	CCWWGG	3 cut(s)	791, 888, 1628
EcoT38I	GRGCYC	2 cut(s)	1078, 1240
ErhI	CCWWGG	3 cut(s)	791, 888, 1628
FaqI	GGGAC	2 cut(s)	282, 2006
FauNDI	CATATG	1 cut(s)	1720
FblI	GTMKAC	2 cut(s)	1362, 2160
Fnu4HI	GCNGC	6 cut(s)	288, 528, 894, 1752, 1925, 1928
FokI	GGATG	5 cut(s)	26, 987, 1406, 1818, 2028
FriOI	GRGCYC	2 cut(s)	1078, 1240
Fsp4HI	GCNGC	6 cut(s)	288, 528, 894, 1752, 1925, 1928
FspBI	CTAG	4 cut(s)	272, 792, 1202, 1530
GlaI	GCGC	1 cut(s)	1589
GluI	GCNGC	6 cut(s)	288, 528, 894, 1752, 1925, 1928
GsaI	CCCAGC	2 cut(s)	639, 1934
GsuI	CTGGAG	1 cut(s)	710
HapII	CCGG	5 cut(s)	210, 1230, 1748, 1799, 1995
HgaI	GACGC	2 cut(s)	1373, 2051
HhaI	GCGC	1 cut(s)	1590
Hin6I	GCGC	1 cut(s)	1588
HinP1I	GCGC	1 cut(s)	1588
HpaII	CCGG	5 cut(s)	210, 1230, 1748, 1799, 1995
HphI	GGTGA	7 cut(s)	224, 893, 1208, 1279, 1364, 1454, 1705
Hpy166II	GTNNAC	9 cut(s)	911, 996, 1217, 1311, 1337, 1363, 1647, 1861, 2161
Hpy188III	TCNNGA	8 cut(s)	162, 164, 839, 1040, 1241, 1523, 1543, 1739
Hpy8I	GTNNAC	9 cut(s)	911, 996, 1217, 1311, 1337, 1363, 1647, 1861, 2161
HpyAV	CCTTC	9 cut(s)	161, 465, 854, 1172, 1439, 1464, 1718, 1794, 1914
HpyCH4III	ACNGT	5 cut(s)	131, 778, 808, 1418, 1666
HpyCH4IV	ACGT	1 cut(s)	262
HpyF10VI	GCNNNNNNNGC	9 cut(s)	293, 507, 536, 594, 1223, 1514, 1764, 1788, 1985
HpyF3I	CTNAG	4 cut(s)	141, 353, 398, 1326
HpySE526I	ACGT	1 cut(s)	262
HspAI	GCGC	1 cut(s)	1588
KpnI	GGTACC	1 cut(s)	210
KspI	CCGCGG	1 cut(s)	314
Kzo9I	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
LmnI	GCTCC	7 cut(s)	313, 729, 767, 1235, 1243, 1505, 1632
Lsp1109I	GCAGC	6 cut(s)	299, 514, 880, 1738, 1936, 1939
LweI	GCATC	6 cut(s)	648, 1009, 1289, 1376, 1697, 1840
MabI	ACCWGGT	1 cut(s)	2128
MaeI	CTAG	4 cut(s)	272, 792, 1202, 1530
MaeII	ACGT	1 cut(s)	262
MaeIII	GTNAC	3 cut(s)	494, 1267, 2088
MalI	GATC	9 cut(s)	337, 789, 867, 1036, 1061, 1111, 1153, 1200, 1404
MboI	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
MboII	GAAGA	9 cut(s)	64, 69, 142, 330, 421, 660, 869, 932, 1409
MfeI	CAATTG	1 cut(s)	1006
MflI	RGATCY	1 cut(s)	335
MhlI	GDGCHC	6 cut(s)	998, 1078, 1219, 1240, 1339, 1649
MlsI	TGGCCA	3 cut(s)	1302, 1979, 2010
MluCI	AATT	9 cut(s)	439, 473, 505, 559, 715, 931, 1006, 1476, 1774
MluNI	TGGCCA	3 cut(s)	1302, 1979, 2010
MlyI	GAGTC	5 cut(s)	61, 413, 1463, 1469, 1542
MmeI	TCCRAC	3 cut(s)	428, 485, 638
Mox20I	TGGCCA	3 cut(s)	1302, 1979, 2010
MscI	TGGCCA	3 cut(s)	1302, 1979, 2010
MseI	TTAA	2 cut(s)	303, 1017
MslI	CAYNNNNRTG	5 cut(s)	515, 1145, 1316, 1419, 1737
Msp20I	TGGCCA	3 cut(s)	1302, 1979, 2010
MspA1I	CMGCKG	2 cut(s)	313, 1930
MspI	CCGG	5 cut(s)	210, 1230, 1748, 1799, 1995
MunI	CAATTG	1 cut(s)	1006
Mva1269I	GAATGC	1 cut(s)	712
MvaI	CCWGG	8 cut(s)	155, 393, 1917, 1943, 1971, 1976, 2007, 2130
MvnI	CGCG	2 cut(s)	313, 1524
MwoI	GCNNNNNNNGC	9 cut(s)	293, 507, 536, 594, 1223, 1514, 1764, 1788, 1985
NciI	CCSGG	2 cut(s)	1800, 1996
NcoI	CCATGG	1 cut(s)	888
NdeI	CATATG	1 cut(s)	1720
NdeII	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
NlaIV	GGNNCC	7 cut(s)	45, 208, 684, 1075, 1076, 1117, 1935
NmuCI	GTSAC	2 cut(s)	494, 1267
NruI	TCGCGA	1 cut(s)	1524
NspI	RCATGY	4 cut(s)	1150, 1679, 1798, 2143
NspV	TTCGAA	1 cut(s)	437
OliI	CACNNNNGTG	1 cut(s)	1419
PaeR7I	CTCGAG	1 cut(s)	162
PagI	TCATGA	2 cut(s)	1039, 1738
PasI	CCCWGGG	1 cut(s)	1942
PciI	ACATGT	1 cut(s)	2139
PctI	GAATGC	1 cut(s)	712
PfeI	GAWTC	6 cut(s)	119, 187, 590, 884, 1346, 1618
PflMI	CCANNNNNTGG	1 cut(s)	467
PinAI	ACCGGT	2 cut(s)	209, 1229
PkrI	GCNGC	6 cut(s)	289, 529, 895, 1753, 1926, 1929
PleI	GAGTC	5 cut(s)	60, 413, 1462, 1468, 1541
PmaCI	CACGTG	1 cut(s)	263
PmlI	CACGTG	1 cut(s)	263
PpsI	GAGTC	5 cut(s)	60, 413, 1462, 1468, 1541
Ppu21I	YACGTR	1 cut(s)	263
PpuMI	RGGWCCY	1 cut(s)	1934
PscI	ACATGT	1 cut(s)	2139
Psp124BI	GAGCTC	1 cut(s)	1240
Psp5II	RGGWCCY	1 cut(s)	1934
Psp6I	CCWGG	8 cut(s)	153, 391, 1915, 1941, 1969, 1974, 2005, 2128
PspCI	CACGTG	1 cut(s)	263
PspFI	CCCAGC	2 cut(s)	635, 1930
PspGI	CCWGG	8 cut(s)	153, 391, 1915, 1941, 1969, 1974, 2005, 2128
PspN4I	GGNNCC	7 cut(s)	45, 208, 684, 1075, 1076, 1117, 1935
PspOMI	GGGCCC	1 cut(s)	1074
PspPPI	RGGWCCY	1 cut(s)	1934
PstNI	CAGNNNCTG	6 cut(s)	527, 782, 1190, 1292, 1930, 2129
PsuI	RGATCY	1 cut(s)	335
PvuII	CAGCTG	1 cut(s)	1930
RruI	TCGCGA	1 cut(s)	1524
RsaI	GTAC	7 cut(s)	175, 208, 248, 820, 910, 974, 1663
RsaNI	GTAC	7 cut(s)	174, 207, 247, 819, 909, 973, 1662
RseI	CAYNNNNRTG	5 cut(s)	515, 1145, 1316, 1419, 1737
SacI	GAGCTC	1 cut(s)	1240
SacII	CCGCGG	1 cut(s)	314
SaqAI	TTAA	2 cut(s)	303, 1017
SatI	GCNGC	6 cut(s)	288, 528, 894, 1752, 1925, 1928
Sau3AI	GATC	9 cut(s)	335, 787, 865, 1034, 1059, 1109, 1151, 1198, 1402
SchI	GAGTC	5 cut(s)	61, 413, 1463, 1469, 1542
SduI	GDGCHC	6 cut(s)	998, 1078, 1219, 1240, 1339, 1649
SexAI	ACCWGGT	1 cut(s)	2128
SfaNI	GCATC	6 cut(s)	648, 1009, 1289, 1376, 1697, 1840
Sfr274I	CTCGAG	1 cut(s)	162
Sfr303I	CCGCGG	1 cut(s)	314
SfuI	TTCGAA	1 cut(s)	437
SgrBI	CCGCGG	1 cut(s)	314
SinI	GGWCC	5 cut(s)	611, 1175, 1934, 2003, 2192
SlaI	CTCGAG	1 cut(s)	162
SmiMI	CAYNNNNRTG	5 cut(s)	515, 1145, 1316, 1419, 1737
SmlI	CTYRAG	3 cut(s)	103, 162, 1262
SmoI	CTYRAG	3 cut(s)	103, 162, 1262
SpeI	ACTAGT	1 cut(s)	271
Sse9I	AATT	9 cut(s)	439, 473, 505, 559, 715, 931, 1006, 1476, 1774
SsiI	CCGC	3 cut(s)	311, 313, 1173
SspMI	CTAG	4 cut(s)	272, 792, 1202, 1530
SstI	GAGCTC	1 cut(s)	1240
StyI	CCWWGG	3 cut(s)	791, 888, 1628
TaaI	ACNGT	5 cut(s)	131, 778, 808, 1418, 1666
TaiI	ACGT	1 cut(s)	265
TaqI	TCGA	5 cut(s)	163, 437, 642, 979, 1405
TaqII	GACCGA	1 cut(s)	357
TasI	AATT	9 cut(s)	439, 473, 505, 559, 715, 931, 1006, 1476, 1774
TatI	WGTACW	2 cut(s)	246, 1661
TfiI	GAWTC	6 cut(s)	119, 187, 590, 884, 1346, 1618
Tru1I	TTAA	2 cut(s)	303, 1017
Tru9I	TTAA	2 cut(s)	303, 1017
TscAI	CASTG	4 cut(s)	184, 417, 1671, 2077
TseFI	GTSAC	2 cut(s)	494, 1267
TseI	GCWGC	6 cut(s)	287, 527, 893, 1751, 1924, 1927
Tsp45I	GTSAC	2 cut(s)	494, 1267
TspGWI	ACGGA	2 cut(s)	780, 1590
TspRI	CASTG	4 cut(s)	184, 417, 1671, 2077
Van91I	CCANNNNNTGG	1 cut(s)	467
VneI	GTGCAC	4 cut(s)	994, 1215, 1335, 1645
VpaK11BI	GGWCC	5 cut(s)	611, 1175, 1934, 2003, 2192
XapI	RAATTY	3 cut(s)	439, 473, 559
XceI	RCATGY	4 cut(s)	1150, 1679, 1798, 2143
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1775, 1987
XhoI	CTCGAG	1 cut(s)	162
XmaJI	CCTAGG	1 cut(s)	791
XmiI	GTMKAC	2 cut(s)	1362, 2160
XspI	CTAG	4 cut(s)	272, 792, 1202, 1530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.