Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004357

Physical Location & Seq

Genomic Coordinates Forward (+)

80323562 .. 80328727

Gene Structure 5166 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34920

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGCTGGCATGGATGATAACGTTGCTATAATTGGGGACTGGGTGCCTCCGAGTCCAAGCCCAAGGGACTTCTTCTCTTCAATGTTAGTTGATGGCATTGGCTCAAGGTCATTCTTGGAATCTCCTAGCAGTAATAAAGCTGAGGAGTTCTGGTCTCGAGAAGGAAATACCAACGGAAAGAACTTGTCACAAGAAAATGGTACCGGTGATGAAATAACTGCAATGGGTTCATTTTCAGAAGCTGGTTTTAATGCTCCGCGGTTGAATACAGAAAGCATTAGATCTTCTGACCTTTCACTTAATTCTGATGTTCGGTCTCCTTATCTGACAATACCCCCTGGTCTCAGTCCAACTACACTGCTAGACTCTCCTGTCTTCCTTTCAAATTCATTGGCACAGCCTTCTCCAACAACTGGAAAATTTCCATTTGTCTCAAATGGTCATGCCAGGAATTCCACATTGATGACAGAGGCTGCTGATAAAGCTAATTTCTTTGAGGACATGAATACTTCGTTTGCTTTCAAGCCTCTGGGCGAATCAGGCTCTTTCTTTCTTGGTCCAACAAGCAAGCAATCCTTTCCCAGCATTGAGGTGTCAGTCCACTCAGAAAACTCTTCTCAAAGTATGGAACCCACCAAAGTTCAAAATCAGAATGCGAACAATTTTCAGCTCCAGCCAGATTTTTCTCGCACATCTACTGAAAAAGATAATGGAGCAAATACAGTCTCCGCAGATCCGAGGGCTTTTGATACTGTTGGTGGCAGTACTGAACATTCTCCACCCCTTGATGAGCAACCAGAGGAAGAAGGAGATCAAAGAGGTGGTGGTGATTCCATGGCTGCTGCTGGTGGAGGTACACCATCTGAAGATGGATATAATTGGAGAAAATATGGACAAAAACAAGTAAAAGGTAGTGAGTACCCACGAAGTTATTACAAGTGCACGCATCCAAATTGTCAGGTTAAGAAAAAGGTTGAACGATCTCATGAGGGTCATATAACAGAGATCATCTACAAGGGGGCCCATAACCACCCTAAACCCCCTCCCAATCGTAGATCAGGGGCCATTGGATCATCTAACCCACTCATTGACATGCGATCGGACGTCCTTGAACAAGGCGGACCACAGACAGGTGCTGATGGTGATCTGGTTTGGGCAAGTGCACAAAAGGCAACTGGTGGAGCTCCTGATTGGAAGCATGACAACCTTGAGGTGACTTCATCAGCATCAGCGGGCCCTGACTACGGCCAGCAATCCACTTCTATGCAGGCTCAGACTGGTGCACACCTTGAATCAGGTGATGTAGTAGACGCATCATCTACCTTTTCCAATGATGAGGATGAAGATGATCGGGGAACGCATGGTAGTGTTTCATTAGCTTATGATGGTGAAGGAGATGAGTCAGAGTCGAAAAGAAGGAAAATTGAAGCCTATGCAACAGAAATGAGTGGAGCTACAAGAGCTATTCGTGAGCCTAGAGTTGTAGTCCAGACTACCAGTGAAGTAGATATACTTGATGATGGATATCGTTGGCGCAAGTATGGGCAGAAAGTAGTGAAAGGGAACCCAAATCCAAGGAGTTACTATAAATGCACCAATGCTGGTTGTACAGTGAGGAAGCATGTGGAGAGAGCATCCCATGACCTCAAGTCAGTCATCACCACATATGAAGGAAAGCACAATCATGATGTTCCCGCTGCTCGCAATAGTAGCCATGTCAATTCTGGCCCTTCTGGCAACATGTCAGGTCAAGCATCTGGCTCTGCTGCACAAACTCATCCTCATCGGCCAGAGCCATCACAAGTTCACAGTAACATGGCAAGATTTGAAAGGCCCATGTCAATGGGCTCATTCAGCTTAGCTGGAAGGCAGCAGCTGGGTCCTCCCCAGGGCTTCTCTTTTGGAATGAACCAGCCTGGCCTGGCAAATCTGGCAATGGCTGGGTTCAGTCCTGGCCAACACAAAGTGCCTGTTCTCCCTGTTCATCATCCATACTTTGCCCAACAGCGTCAGGTCAGTGAAATGGGTTTCATGTTACCAAAAGGAGAACCAAAAGTAGAGCCAATGTCAGAACCTGGCCTAAACATGAACAATGCTTCATCGGTATACCAACAACTTATGAGTAGGCTTCCCCTTGGACCACAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007163 GO:0007275 GO:0007389 GO:0008150 GO:0009266 GO:0009409 GO:0009555 GO:0009628 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009889 GO:0009942 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

716

Amino Acids

77.26

Weight (kDa)

5.63

Isoelectric Point (pI)

52.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	289 - 345	3.3e-26	WRKY DNA -binding domain
WRKY	PF03106	506 - 563	2.5e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004357)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26440 AT5G56270
fragaria_vesca	FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430 FvH4_3g41430
malus_domestica	MD03G1044400.v1.1
prunus_persica	Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1 Prupe.6G036300_v2.0.a1
pyrus_communis	pycom03g03430
rosa_chinensis	RchiOBHm_Chr5g0074411
rosa_laevigata	RLG00000036473
rosa_multiflora	Rmu_sc0000573.1_g000009
rosa_roxburghii	Rroxscaffold_1G00007130
rosa_rugosa	Rorug05G0430900 Rorug05G0431000 Rorug05G0431100 Rorug05G0431200 Rorug05G0431300 Rorug05G0431400
rosa_samantha	Rh5AG488600 Rh5BG509400 Rh5CG533200 Rh5DG522100
rosa_wichuraiana	Rw5G045310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	371
AatII	GACGTC	1 cut(s)	1107
Acc65I	GGTACC	1 cut(s)	200
AccB1I	GGYRCC	2 cut(s)	43, 200
AccB7I	CCANNNNNTGG	1 cut(s)	413
AccI	GTMKAC	2 cut(s)	1308, 2106
AccII	CGCG	1 cut(s)	259
AciI	CCGC	6 cut(s)	257, 259, 729, 1119, 1232, 1695
AclI	AACGTT	1 cut(s)	21
AclWI	GGATC	2 cut(s)	728, 1078
AcoI	YGGCCR	3 cut(s)	1246, 1787, 1954
AcsI	RAATTY	3 cut(s)	385, 419, 451
AcuI	CTGAAG	1 cut(s)	885
AcyI	GRCGYC	1 cut(s)	1104
AdeI	CACNNNGTG	1 cut(s)	1966
AfaI	GTAC	5 cut(s)	202, 766, 856, 920, 1609
AfiI	CCNNNNNNNGG	4 cut(s)	413, 1130, 1244, 1889
AflIII	ACRYGT	1 cut(s)	1740
AgeI	ACCGGT	1 cut(s)	203
AhdI	GACNNNNNGTC	1 cut(s)	1648
AjnI	CCWGG	7 cut(s)	337, 446, 1887, 1915, 1920, 1951, 2074
Alw21I	GWGCWC	4 cut(s)	944, 1165, 1186, 1285
Alw26I	GTCTC	5 cut(s)	159, 321, 347, 436, 730
Alw44I	GTGCAC	3 cut(s)	940, 1161, 1281
AlwI	GGATC	2 cut(s)	728, 1078
AlwNI	CAGNNNCTG	5 cut(s)	242, 473, 1136, 1876, 2075
Ama87I	CYCGRG	1 cut(s)	156
ApaI	GGGCCC	2 cut(s)	1024, 1238
ApaLI	GTGCAC	3 cut(s)	940, 1161, 1281
ApeKI	GCWGC	7 cut(s)	473, 839, 842, 1697, 1766, 1870, 1873
ApoI	RAATTY	3 cut(s)	385, 419, 451
AsiGI	ACCGGT	1 cut(s)	203
Asp718I	GGTACC	1 cut(s)	200
AspLEI	GCGC	1 cut(s)	1536
AsuHPI	GGTGA	7 cut(s)	218, 839, 1154, 1225, 1310, 1400, 1651
AvaI	CYCGRG	1 cut(s)	156
AvaII	GGWCC	4 cut(s)	557, 1121, 1880, 2138
BaeGI	GKGCMC	5 cut(s)	944, 1024, 1165, 1238, 1285
BalI	TGGCCA	1 cut(s)	1956
BanI	GGYRCC	2 cut(s)	43, 200
BanII	GRGCYC	4 cut(s)	1024, 1186, 1238, 1850
BarI	GAAGNNNNNNTAC	2 cut(s)	1494, 1526
BbsI	GAAGAC	1 cut(s)	367
Bbv12I	GWGCWC	4 cut(s)	944, 1165, 1186, 1285
BbvCI	CCTCAGC	1 cut(s)	141
BbvI	GCAGC	7 cut(s)	460, 826, 829, 1684, 1753, 1882, 1885
BccI	CCATC	7 cut(s)	86, 863, 868, 1133, 1379, 1514, 1804
BceAI	ACGGC	1 cut(s)	1261
BciT130I	CCWGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
BcoDI	GTCTC	5 cut(s)	159, 321, 347, 436, 730
BfaI	CTAG	3 cut(s)	126, 362, 1476
BglI	GCCNNNNNGGC	1 cut(s)	1734
BglII	AGATCT	1 cut(s)	281
BisI	GCNGC	7 cut(s)	474, 840, 843, 1698, 1767, 1871, 1874
BlpI	GCTNAGC	1 cut(s)	1858
BlsI	GCNGC	7 cut(s)	475, 841, 844, 1699, 1768, 1872, 1875
BmcAI	AGTACT	1 cut(s)	766
Bme1390I	CCNGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
Bme18I	GGWCC	4 cut(s)	557, 1121, 1880, 2138
BmeRI	GACNNNNNGTC	1 cut(s)	1648
BmeT110I	CYCGRG	1 cut(s)	156
BmiI	GGNNCC	9 cut(s)	45, 202, 630, 1021, 1022, 1063, 1236, 1565, 1881
BmrFI	CCNGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
BmrI	ACTGGG	1 cut(s)	49
BmsI	GCATC	5 cut(s)	955, 1235, 1322, 1643, 1763
BmuI	ACTGGG	1 cut(s)	49
BpiI	GAAGAC	1 cut(s)	367
BpmI	CTGGAG	1 cut(s)	656
Bpu10I	CCTNAGC	1 cut(s)	141
Bpu1102I	GCTNAGC	1 cut(s)	1858
BpuEI	CTTGAG	3 cut(s)	88, 1229, 1631
BsaBI	GATNNNNATC	2 cut(s)	1143, 1524
BsaHI	GRCGYC	1 cut(s)	1104
BsaI	GGTCTC	3 cut(s)	159, 321, 347
BsaJI	CCNNGG	9 cut(s)	62, 257, 337, 737, 834, 1574, 1887, 1888, 2134
BsaWI	WCCGGW	1 cut(s)	203
BsaXI	ACNNNNNCTCC	2 cut(s)	137, 167
Bsc4I	CCNNNNNNNGG	4 cut(s)	413, 1130, 1244, 1889
Bse118I	RCCGGY	1 cut(s)	203
Bse1I	ACTGG	5 cut(s)	44, 418, 1180, 1282, 1497
Bse3DI	GCAATG	2 cut(s)	228, 1941
Bse8I	GATNNNNATC	2 cut(s)	1143, 1524
BseBI	CCWGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
BseDI	CCNNGG	9 cut(s)	62, 257, 337, 737, 834, 1574, 1887, 1888, 2134
BseGI	GGATG	6 cut(s)	19, 946, 1345, 1634, 1777, 1987
BseJI	GATNNNNATC	2 cut(s)	1143, 1524
BseLI	CCNNNNNNNGG	4 cut(s)	413, 1130, 1244, 1889
BseMI	GCAATG	2 cut(s)	228, 1941
BseMII	CTCAG	4 cut(s)	132, 358, 618, 1286
BseNI	ACTGG	5 cut(s)	44, 418, 1180, 1282, 1497
BseRI	GAGGAG	1 cut(s)	158
BseSI	GKGCMC	5 cut(s)	944, 1024, 1165, 1238, 1285
BseXI	GCAGC	7 cut(s)	460, 826, 829, 1684, 1753, 1882, 1885
BseYI	CCCAGC	3 cut(s)	581, 1876, 1940
BsgI	GTGCAG	1 cut(s)	1752
Bsh1236I	CGCG	1 cut(s)	259
Bsh1285I	CGRYCG	1 cut(s)	1100
BshNI	GGYRCC	2 cut(s)	43, 200
BshTI	ACCGGT	1 cut(s)	203
BsiEI	CGRYCG	1 cut(s)	1100
BsiHKAI	GWGCWC	4 cut(s)	944, 1165, 1186, 1285
BsiHKCI	CYCGRG	1 cut(s)	156
BsiSI	CCGG	1 cut(s)	204
BslFI	GGGAC	2 cut(s)	50, 80
BslI	CCNNNNNNNGG	4 cut(s)	413, 1130, 1244, 1889
BsmAI	GTCTC	5 cut(s)	159, 321, 347, 436, 730
BsmFI	GGGAC	2 cut(s)	50, 80
BsmI	GAATGC	1 cut(s)	658
Bso31I	GGTCTC	3 cut(s)	159, 321, 347
BsoBI	CYCGRG	1 cut(s)	156
Bsp120I	GGGCCC	2 cut(s)	1020, 1234
Bsp1286I	GDGCHC	7 cut(s)	944, 1024, 1165, 1186, 1238, 1285, 1850
Bsp1407I	TGTACA	1 cut(s)	1607
Bsp1720I	GCTNAGC	1 cut(s)	1858
Bsp19I	CCATGG	1 cut(s)	834
BspACI	CCGC	6 cut(s)	257, 259, 729, 1119, 1232, 1695
BspCNI	CTCAG	4 cut(s)	133, 357, 617, 1285
BspFNI	CGCG	1 cut(s)	259
BspHI	TCATGA	2 cut(s)	985, 1684
BspLI	GGNNCC	9 cut(s)	45, 202, 630, 1021, 1022, 1063, 1236, 1565, 1881
BspPI	GGATC	2 cut(s)	728, 1078
BspT107I	GGYRCC	2 cut(s)	43, 200
BspTNI	GGTCTC	3 cut(s)	159, 321, 347
BsrDI	GCAATG	2 cut(s)	228, 1941
BsrFI	RCCGGY	1 cut(s)	203
BsrGI	TGTACA	1 cut(s)	1607
BsrI	ACTGG	5 cut(s)	44, 418, 1180, 1282, 1497
BssAI	RCCGGY	1 cut(s)	203
BssECI	CCNNGG	9 cut(s)	62, 257, 337, 737, 834, 1574, 1887, 1888, 2134
BssNAI	GTATAC	1 cut(s)	2107
BssNI	GRCGYC	1 cut(s)	1104
BssT1I	CCWWGG	4 cut(s)	62, 834, 1574, 2134
Bst1107I	GTATAC	1 cut(s)	2107
Bst2UI	CCWGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
Bst4CI	ACNGT	4 cut(s)	724, 754, 1612, 1811
Bst6I	CTCTTC	2 cut(s)	82, 619
BstACI	GRCGYC	1 cut(s)	1104
BstAUI	TGTACA	1 cut(s)	1607
BstC8I	GCNNGC	7 cut(s)	7, 569, 944, 1234, 1250, 1269, 1702
BstDEI	CTNAG	5 cut(s)	141, 344, 604, 1272, 1858
BstDSI	CCRYGG	2 cut(s)	257, 834
BstF5I	GGATG	6 cut(s)	19, 946, 1345, 1634, 1777, 1987
BstFNI	CGCG	1 cut(s)	259
BstHHI	GCGC	1 cut(s)	1536
BstMAI	GTCTC	5 cut(s)	159, 321, 347, 436, 730
BstMCI	CGRYCG	1 cut(s)	1100
BstMWI	GCNNNNNNNGC	8 cut(s)	482, 540, 1169, 1460, 1710, 1734, 1854, 1931
BstNI	CCWGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
BstNSI	RCATGY	3 cut(s)	1096, 1625, 1744
BstSCI	CCNGG	7 cut(s)	337, 446, 1887, 1915, 1920, 1951, 2074
BstSLI	GKGCMC	5 cut(s)	944, 1024, 1165, 1238, 1285
BstUI	CGCG	1 cut(s)	259
BstV1I	GCAGC	7 cut(s)	460, 826, 829, 1684, 1753, 1882, 1885
BstV2I	GAAGAC	1 cut(s)	367
BstX2I	RGATCY	2 cut(s)	281, 733
BstXI	CCANNNNNNTGG	1 cut(s)	1843
BstYI	RGATCY	2 cut(s)	281, 733
BstZ17I	GTATAC	1 cut(s)	2107
BtgI	CCRYGG	2 cut(s)	257, 834
BtsCI	GGATG	6 cut(s)	19, 946, 1345, 1634, 1777, 1987
BtsI	GCAGTG	1 cut(s)	356
BtsIMutI	CAGTG	4 cut(s)	356, 1504, 1617, 2023
Cac8I	GCNNGC	7 cut(s)	7, 569, 944, 1234, 1250, 1269, 1702
CaiI	CAGNNNCTG	5 cut(s)	242, 473, 1136, 1876, 2075
CciI	TCATGA	2 cut(s)	985, 1684
CfoI	GCGC	1 cut(s)	1536
Cfr10I	RCCGGY	1 cut(s)	203
Cfr42I	CCGCGG	1 cut(s)	260
CseI	GACGC	2 cut(s)	1319, 1997
Csp6I	GTAC	5 cut(s)	201, 765, 855, 919, 1608
CspAI	ACCGGT	1 cut(s)	203
CviQI	GTAC	5 cut(s)	201, 765, 855, 919, 1608
DdeI	CTNAG	5 cut(s)	141, 344, 604, 1272, 1858
DraIII	CACNNNGTG	1 cut(s)	1966
DrdI	GACNNNNNNGTC	1 cut(s)	371
DriI	GACNNNNNGTC	1 cut(s)	1648
DseDI	GACNNNNNNGTC	1 cut(s)	371
EaeI	YGGCCR	3 cut(s)	1246, 1787, 1954
Eam1104I	CTCTTC	2 cut(s)	82, 619
Eam1105I	GACNNNNNGTC	1 cut(s)	1648
EarI	CTCTTC	2 cut(s)	82, 619
EciI	GGCGGA	1 cut(s)	1134
Ecl136II	GAGCTC	1 cut(s)	1184
Eco130I	CCWWGG	4 cut(s)	62, 834, 1574, 2134
Eco24I	GRGCYC	4 cut(s)	1024, 1186, 1238, 1850
Eco31I	GGTCTC	3 cut(s)	159, 321, 347
Eco32I	GATATC	1 cut(s)	1526
Eco47I	GGWCC	4 cut(s)	557, 1121, 1880, 2138
Eco53kI	GAGCTC	1 cut(s)	1184
Eco57I	CTGAAG	1 cut(s)	885
Eco88I	CYCGRG	1 cut(s)	156
EcoICRI	GAGCTC	1 cut(s)	1184
EcoO109I	RGGNCCY	3 cut(s)	1020, 1235, 1880
EcoRI	GAATTC	1 cut(s)	451
EcoRII	CCWGG	7 cut(s)	337, 446, 1887, 1915, 1920, 1951, 2074
EcoRV	GATATC	1 cut(s)	1526
EcoT14I	CCWWGG	4 cut(s)	62, 834, 1574, 2134
EcoT38I	GRGCYC	4 cut(s)	1024, 1186, 1238, 1850
ErhI	CCWWGG	4 cut(s)	62, 834, 1574, 2134
FalI	AAGNNNNNCTT	2 cut(s)	560, 592
FaqI	GGGAC	2 cut(s)	50, 80
FauI	CCCGC	2 cut(s)	1225, 1702
FauNDI	CATATG	1 cut(s)	1666
FblI	GTMKAC	2 cut(s)	1308, 2106
Fnu4HI	GCNGC	7 cut(s)	474, 840, 843, 1698, 1767, 1871, 1874
FokI	GGATG	6 cut(s)	26, 933, 1352, 1621, 1764, 1974
FriOI	GRGCYC	4 cut(s)	1024, 1186, 1238, 1850
Fsp4HI	GCNGC	7 cut(s)	474, 840, 843, 1698, 1767, 1871, 1874
FspBI	CTAG	3 cut(s)	126, 362, 1476
GlaI	GCGC	1 cut(s)	1535
GluI	GCNGC	7 cut(s)	474, 840, 843, 1698, 1767, 1871, 1874
GsaI	CCCAGC	3 cut(s)	585, 1880, 1944
GsuI	CTGGAG	1 cut(s)	656
HapII	CCGG	1 cut(s)	204
HgaI	GACGC	2 cut(s)	1319, 1997
HhaI	GCGC	1 cut(s)	1536
Hin1I	GRCGYC	1 cut(s)	1104
Hin6I	GCGC	1 cut(s)	1534
HinP1I	GCGC	1 cut(s)	1534
HinfI	GANTC	8 cut(s)	52, 119, 365, 536, 830, 1292, 1400, 1406
HpaII	CCGG	1 cut(s)	204
HphI	GGTGA	7 cut(s)	218, 839, 1154, 1225, 1310, 1400, 1651
Hpy166II	GTNNAC	8 cut(s)	601, 857, 942, 1163, 1283, 1309, 1807, 2107
Hpy188III	TCNNGA	7 cut(s)	156, 158, 986, 1187, 1469, 1489, 1685
Hpy8I	GTNNAC	8 cut(s)	601, 857, 942, 1163, 1283, 1309, 1807, 2107
HpyAV	CCTTC	8 cut(s)	155, 411, 800, 1385, 1410, 1664, 1740, 1860
HpyCH4III	ACNGT	4 cut(s)	724, 754, 1612, 1811
HpyCH4IV	ACGT	2 cut(s)	21, 1104
HpyCH4V	TGCA	8 cut(s)	221, 942, 1163, 1267, 1283, 1436, 1593, 1769
HpyF10VI	GCNNNNNNNGC	8 cut(s)	482, 540, 1169, 1460, 1710, 1734, 1854, 1931
HpyF3I	CTNAG	5 cut(s)	141, 344, 604, 1272, 1858
HpySE526I	ACGT	2 cut(s)	21, 1104
Hsp92I	GRCGYC	1 cut(s)	1104
HspAI	GCGC	1 cut(s)	1534
KpnI	GGTACC	1 cut(s)	204
KspI	CCGCGG	1 cut(s)	260
LmnI	GCTCC	6 cut(s)	259, 675, 713, 1181, 1189, 1451
Lsp1109I	GCAGC	7 cut(s)	460, 826, 829, 1684, 1753, 1882, 1885
LweI	GCATC	5 cut(s)	955, 1235, 1322, 1643, 1763
MaeI	CTAG	3 cut(s)	126, 362, 1476
MaeII	ACGT	2 cut(s)	21, 1104
MaeIII	GTNAC	5 cut(s)	186, 1213, 1580, 1811, 2034
MboII	GAAGA	8 cut(s)	64, 69, 276, 367, 606, 815, 878, 1355
MflI	RGATCY	2 cut(s)	281, 733
MhlI	GDGCHC	7 cut(s)	944, 1024, 1165, 1186, 1238, 1285, 1850
MlsI	TGGCCA	1 cut(s)	1956
MluNI	TGGCCA	1 cut(s)	1956
MlyI	GAGTC	4 cut(s)	61, 359, 1409, 1415
MmeI	TCCRAC	3 cut(s)	374, 431, 584
Mox20I	TGGCCA	1 cut(s)	1956
MscI	TGGCCA	1 cut(s)	1956
MseI	TTAA	3 cut(s)	249, 300, 963
MslI	CAYNNNNRTG	7 cut(s)	461, 590, 1091, 1262, 1365, 1683, 1841
Msp20I	TGGCCA	1 cut(s)	1956
MspA1I	CMGCKG	4 cut(s)	259, 1232, 1697, 1876
MspI	CCGG	1 cut(s)	204
MspR9I	CCNGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
Mva1269I	GAATGC	1 cut(s)	658
MvaI	CCWGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
MvnI	CGCG	1 cut(s)	259
MwoI	GCNNNNNNNGC	8 cut(s)	482, 540, 1169, 1460, 1710, 1734, 1854, 1931
NcoI	CCATGG	1 cut(s)	834
NdeI	CATATG	1 cut(s)	1666
NlaIV	GGNNCC	9 cut(s)	45, 202, 630, 1021, 1022, 1063, 1236, 1565, 1881
NmuCI	GTSAC	2 cut(s)	186, 1213
NspI	RCATGY	3 cut(s)	1096, 1625, 1744
PaeR7I	CTCGAG	1 cut(s)	156
PagI	TCATGA	2 cut(s)	985, 1684
PasI	CCCWGGG	1 cut(s)	1888
PciI	ACATGT	1 cut(s)	1740
PctI	GAATGC	1 cut(s)	658
PfeI	GAWTC	4 cut(s)	119, 536, 830, 1292
PflMI	CCANNNNNTGG	1 cut(s)	413
PinAI	ACCGGT	1 cut(s)	203
PkrI	GCNGC	7 cut(s)	475, 841, 844, 1699, 1768, 1872, 1875
Ple19I	CGATCG	1 cut(s)	1100
PleI	GAGTC	4 cut(s)	60, 359, 1408, 1414
PpsI	GAGTC	4 cut(s)	60, 359, 1408, 1414
PpuMI	RGGWCCY	1 cut(s)	1880
PscI	ACATGT	1 cut(s)	1740
Psp124BI	GAGCTC	1 cut(s)	1186
Psp1406I	AACGTT	1 cut(s)	21
Psp5II	RGGWCCY	1 cut(s)	1880
Psp6I	CCWGG	7 cut(s)	337, 446, 1887, 1915, 1920, 1951, 2074
PspFI	CCCAGC	3 cut(s)	581, 1876, 1940
PspGI	CCWGG	7 cut(s)	337, 446, 1887, 1915, 1920, 1951, 2074
PspN4I	GGNNCC	9 cut(s)	45, 202, 630, 1021, 1022, 1063, 1236, 1565, 1881
PspOMI	GGGCCC	2 cut(s)	1020, 1234
PspPPI	RGGWCCY	1 cut(s)	1880
PstNI	CAGNNNCTG	5 cut(s)	242, 473, 1136, 1876, 2075
PsuI	RGATCY	2 cut(s)	281, 733
PvuI	CGATCG	1 cut(s)	1100
PvuII	CAGCTG	1 cut(s)	1876
RsaI	GTAC	5 cut(s)	202, 766, 856, 920, 1609
RsaNI	GTAC	5 cut(s)	201, 765, 855, 919, 1608
RseI	CAYNNNNRTG	7 cut(s)	461, 590, 1091, 1262, 1365, 1683, 1841
SacI	GAGCTC	1 cut(s)	1186
SacII	CCGCGG	1 cut(s)	260
SaqAI	TTAA	3 cut(s)	249, 300, 963
SatI	GCNGC	7 cut(s)	474, 840, 843, 1698, 1767, 1871, 1874
ScaI	AGTACT	1 cut(s)	766
SchI	GAGTC	4 cut(s)	61, 359, 1409, 1415
ScrFI	CCNGG	7 cut(s)	339, 448, 1889, 1917, 1922, 1953, 2076
SduI	GDGCHC	7 cut(s)	944, 1024, 1165, 1186, 1238, 1285, 1850
SfaNI	GCATC	5 cut(s)	955, 1235, 1322, 1643, 1763
Sfr274I	CTCGAG	1 cut(s)	156
Sfr303I	CCGCGG	1 cut(s)	260
SgrBI	CCGCGG	1 cut(s)	260
SinI	GGWCC	4 cut(s)	557, 1121, 1880, 2138
SlaI	CTCGAG	1 cut(s)	156
SmiMI	CAYNNNNRTG	7 cut(s)	461, 590, 1091, 1262, 1365, 1683, 1841
SmlI	CTYRAG	4 cut(s)	103, 156, 1208, 1646
SmoI	CTYRAG	4 cut(s)	103, 156, 1208, 1646
SsiI	CCGC	6 cut(s)	257, 259, 729, 1119, 1232, 1695
SspMI	CTAG	3 cut(s)	126, 362, 1476
SstI	GAGCTC	1 cut(s)	1186
StyD4I	CCNGG	7 cut(s)	337, 446, 1887, 1915, 1920, 1951, 2074
StyI	CCWWGG	4 cut(s)	62, 834, 1574, 2134
TaaI	ACNGT	4 cut(s)	724, 754, 1612, 1811
TaiI	ACGT	2 cut(s)	24, 1107
TaqI	TCGA	2 cut(s)	157, 1409
TaqII	GACCGA	1 cut(s)	303
TatI	WGTACW	2 cut(s)	764, 1607
TfiI	GAWTC	4 cut(s)	119, 536, 830, 1292
Tru1I	TTAA	3 cut(s)	249, 300, 963
Tru9I	TTAA	3 cut(s)	249, 300, 963
TscAI	CASTG	4 cut(s)	363, 1504, 1617, 2023
TseFI	GTSAC	2 cut(s)	186, 1213
TseI	GCWGC	7 cut(s)	473, 839, 842, 1697, 1766, 1870, 1873
Tsp45I	GTSAC	2 cut(s)	186, 1213
TspGWI	ACGGA	1 cut(s)	189
TspRI	CASTG	4 cut(s)	363, 1504, 1617, 2023
Van91I	CCANNNNNTGG	1 cut(s)	413
VneI	GTGCAC	3 cut(s)	940, 1161, 1281
VpaK11BI	GGWCC	4 cut(s)	557, 1121, 1880, 2138
XapI	RAATTY	3 cut(s)	385, 419, 451
XceI	RCATGY	3 cut(s)	1096, 1625, 1744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1721
XhoI	CTCGAG	1 cut(s)	156
XmiI	GTMKAC	2 cut(s)	1308, 2106
XspI	CTAG	3 cut(s)	126, 362, 1476
ZraI	GACGTC	1 cut(s)	1105
ZrmI	AGTACT	1 cut(s)	766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.