AT5G56740

Histone acetyltransferase type B catalytic

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
22952767 .. 22955739
2973 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G56740.1

Sequence Viewer

Length: 1404 bp
ATGGTTCAGAAGCAGCAAGCCTCCGCCGGTCCGGGTACCGAGCCTAAGAAGCGTCGCCGTGTCGGATTTTCTCCCGCCGATACTGGTGTCGAGGCTAACGAGTGCATCAAAATTTATCTCGTTTCAAGCAAAGAGGAAGTTGATTCCTCTGATATTTCCAGCGTGAAGCCAGTTGACTTGAATGATTTCTTTGATGGAGATGGCAAGATTTATGGTTACCAAGGTTTGAAGATAAATGTATGGATCAATAGCATCTCATTACATTCATATGCTGATATCACATACCAGAGCACCATTAACGGAGACAAAGGCATCACGGACCTCAAATCTGCTTTACAGAACATATTTGCTGAGACCATTGTTGATACCAAGGATGAGTTTCTGCAAACCTTTTCGACACAGAGAGATTTTATCAGAAATATGGTCTCGAATGGAGAGGTAATGCATGCTGGAGCAACAGATGGAAGCAGCAAGAATGCTGAAGTGGTTCCTTCTGATCCCCAGGTTATACGGATGGAAATTGGTTCTCCAAATGCTGGACTCCTCTATAGCCGATTGGTACCCCTTGTTCTTCTTTTTGTCGATGGCAGCAATCCGATTGATGTCACTGATCCTGACTGGCATTTATATCTCTTAATCCAGAAGAAAGAGGAAAAAGAAGATCCTTTGTATCGAATTGTGGGCTTTACCGCAATTTATAAGTTCTATCGTTATCCTGACAGGCTGCGGATGCGACTCAGCCAGATCTTGGTCTTACCATCCTTCCAAGGAAAAGGACTCGGAAGCTATCTTATGGAGGTAGTAAACAACGTGGCCATAACAGAAAACGTTTACGATTTGACAGTTGAGGAGCCATCTGAAAAGTTCCAACACATCCGCACTTGCATAGACATAAACCGCTTGCGCAGTTTCGATCCAATCAAACCAGACATTGATTCAGCTGTTCAGACTCTCACAAAAGGAAAGCTATCAAAGAAAGCTCAGATACCTCGATTCACCCCGCCTCTGAACGCCATTGAGAAAGTCCGCGAATCTCTGAAGATCAACAAGAAACAGTTCCTCAAATGCTGGGAGATTTTGATATACCTTGCTCTTGATCCTATTGACAAGTACATGGAAGATTACACATCAGTCATCACGAACCATGTGAGAACCGACATTCTGGGAAAAGATATAGAAACTCCAAAGAAACAAGTCGTTGATGTTCCAAGCTCTTTCGAGCCAGAAGCATCGTTTGTGGTTTTCAAGTCTGTAAACGGAGAAGAGGCTAATACCAATGTTCAAGTTGATGAAAACAAACCGGATCAAGAGCAGCAGCTGAAGCAACTTGTTGAGGAAAGGATTCGTGAGATCAAGTTGGTTGCTGAGAAAGTCTCCAAGAGTGGTCAAACGCTAAAAGTCTGA

Protein Analysis

467

Amino Acids

52.74

Weight (kDa)

5.46

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hat1_N PF10394 30 - 195 3.8e-32 Histone acetyl transferase HAT1 N-terminus
Acetyltransf_1 PF00583 220 - 284 3.9e-06 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
Acc16I TGCGCA 1 cut(s) 905
Acc65I GGTACC 2 cut(s) 35, 559
AccB1I GGYRCC 2 cut(s) 35, 559
AccB7I CCANNNNNTGG 2 cut(s) 536, 748
AccII CGCG 1 cut(s) 1029
AciI CCGC 8 cut(s) 24, 75, 690, 727, 877, 898, 1001, 1027
AclI AACGTT 1 cut(s) 828
AclWI GGATC 7 cut(s) 251, 491, 605, 656, 908, 1091, 1311
AcoI YGGCCR 1 cut(s) 813
AcsI RAATTY 1 cut(s) 111
AcuI CTGAAG 3 cut(s) 501, 1058, 1340
AfaI GTAC 3 cut(s) 37, 561, 1112
AfiI CCNNNNNNNGG 2 cut(s) 536, 748
AgsI TTSAA 5 cut(s) 126, 181, 229, 1246, 1283
AjnI CCWGG 1 cut(s) 501
AluBI AGCT 6 cut(s) 786, 941, 967, 980, 1212, 1318
AluI AGCT 6 cut(s) 786, 941, 967, 980, 1212, 1318
Alw21I GWGCWC 1 cut(s) 293
Alw26I GTCTC 4 cut(s) 297, 347, 430, 1378
AlwI GGATC 7 cut(s) 251, 491, 605, 656, 908, 1091, 1311
AlwNI CAGNNNCTG 1 cut(s) 1318
AoxI GGCC 1 cut(s) 813
ApeKI GCWGC 6 cut(s) 13, 468, 588, 724, 1312, 1315
ApoI RAATTY 1 cut(s) 111
Asp700I GAANNNNTTC 4 cut(s) 185, 486, 1055, 1341
Asp718I GGTACC 2 cut(s) 35, 559
AspLEI GCGC 1 cut(s) 906
AspS9I GGNCC 2 cut(s) 29, 319
AsuC2I CCSGG 1 cut(s) 33
AsuHPI GGTGA 1 cut(s) 988
AvaII GGWCC 2 cut(s) 29, 319
BaeI ACNNNNGTAYC 2 cut(s) 72, 105
BalI TGGCCA 1 cut(s) 815
BanI GGYRCC 2 cut(s) 35, 559
Bbv12I GWGCWC 1 cut(s) 293
BbvI GCAGC 6 cut(s) 25, 480, 600, 711, 1324, 1327
BccI CCATC 7 cut(s) 188, 194, 455, 508, 578, 766, 862
BceAI ACGGC 1 cut(s) 42
BciT130I CCWGG 1 cut(s) 503
BcnI CCSGG 1 cut(s) 33
BcoDI GTCTC 4 cut(s) 297, 347, 430, 1378
BfmI CTRYAG 1 cut(s) 547
BglII AGATCT 1 cut(s) 744
BisI GCNGC 6 cut(s) 14, 469, 589, 725, 1313, 1316
BlsI GCNGC 6 cut(s) 15, 470, 590, 726, 1314, 1317
Bme1390I CCNGG 2 cut(s) 33, 503
Bme18I GGWCC 2 cut(s) 29, 319
BmgT120I GGNCC 2 cut(s) 29, 319
BmiI GGNNCC 4 cut(s) 37, 489, 561, 852
BmrFI CCNGG 2 cut(s) 33, 503
BmsI GCATC 5 cut(s) 114, 261, 321, 720, 1238
BplI GAGNNNNNCTC 2 cut(s) 1358, 1390
BpmI CTGGAG 1 cut(s) 471
BpuMI CCSGG 1 cut(s) 33
BsaI GGTCTC 2 cut(s) 347, 430
BsaJI CCNNGG 4 cut(s) 220, 369, 501, 766
BsaWI WCCGGW 1 cut(s) 1300
Bsc4I CCNNNNNNNGG 2 cut(s) 536, 748
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 3 cut(s) 88, 170, 623
BseBI CCWGG 1 cut(s) 503
BseDI CCNNGG 4 cut(s) 220, 369, 501, 766
BseGI GGATG 5 cut(s) 379, 519, 735, 758, 873
BseLI CCNNNNNNNGG 2 cut(s) 536, 748
BseMII CTCAG 4 cut(s) 342, 751, 995, 1356
BseNI ACTGG 3 cut(s) 88, 170, 623
BseRI GAGGAG 2 cut(s) 533, 863
BseXI GCAGC 6 cut(s) 25, 480, 600, 711, 1324, 1327
BseYI CCCAGC 1 cut(s) 1068
Bsh1236I CGCG 1 cut(s) 1029
BshFI GGCC 1 cut(s) 815
BshNI GGYRCC 2 cut(s) 35, 559
BsiHKAI GWGCWC 1 cut(s) 293
BsiSI CCGG 3 cut(s) 27, 32, 1301
BslI CCNNNNNNNGG 2 cut(s) 536, 748
BsmAI GTCTC 4 cut(s) 297, 347, 430, 1378
BsmI GAATGC 1 cut(s) 481
BsnI GGCC 1 cut(s) 815
Bso31I GGTCTC 2 cut(s) 347, 430
Bsp1286I GDGCHC 1 cut(s) 293
BspACI CCGC 8 cut(s) 24, 75, 690, 727, 877, 898, 1001, 1027
BspANI GGCC 1 cut(s) 815
BspCNI CTCAG 4 cut(s) 343, 750, 994, 1357
BspFNI CGCG 1 cut(s) 1029
BspLI GGNNCC 4 cut(s) 37, 489, 561, 852
BspPI GGATC 7 cut(s) 251, 491, 605, 656, 908, 1091, 1311
BspT107I GGYRCC 2 cut(s) 35, 559
BspTNI GGTCTC 2 cut(s) 347, 430
BsrFI RCCGGY 1 cut(s) 26
BsrI ACTGG 3 cut(s) 88, 170, 623
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 4 cut(s) 220, 369, 501, 766
BssT1I CCWWGG 3 cut(s) 220, 369, 766
Bst2UI CCWGG 1 cut(s) 503
Bst4CI ACNGT 2 cut(s) 844, 1056
Bst6I CTCTTC 1 cut(s) 1257
BstC8I GCNNGC 3 cut(s) 18, 447, 902
BstDEI CTNAG 5 cut(s) 45, 351, 737, 981, 1365
BstEII GGTNACC 1 cut(s) 215
BstF5I GGATG 5 cut(s) 379, 519, 735, 758, 873
BstFNI CGCG 1 cut(s) 1029
BstHHI GCGC 1 cut(s) 906
BstMAI GTCTC 4 cut(s) 297, 347, 430, 1378
BstMWI GCNNNNNNNGC 3 cut(s) 49, 730, 1321
BstNI CCWGG 1 cut(s) 503
BstNSI RCATGY 1 cut(s) 449
BstPI GGTNACC 1 cut(s) 215
BstSCI CCNGG 2 cut(s) 31, 501
BstSFI CTRYAG 1 cut(s) 547
BstUI CGCG 1 cut(s) 1029
BstV1I GCAGC 6 cut(s) 25, 480, 600, 711, 1324, 1327
BstX2I RGATCY 2 cut(s) 661, 744
BstYI RGATCY 2 cut(s) 661, 744
BsuRI GGCC 1 cut(s) 815
BtsCI GGATG 5 cut(s) 379, 519, 735, 758, 873
BtsIMutI CAGTG 1 cut(s) 606
Cac8I GCNNGC 3 cut(s) 18, 447, 902
CaiI CAGNNNCTG 1 cut(s) 1318
CfoI GCGC 1 cut(s) 906
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 2 cut(s) 29, 319
CpoI CGGWCCG 1 cut(s) 29
CseI GACGC 1 cut(s) 41
Csp6I GTAC 3 cut(s) 36, 560, 1111
CspI CGGWCCG 1 cut(s) 29
CviAII CATG 3 cut(s) 446, 1114, 1145
CviQI GTAC 3 cut(s) 36, 560, 1111
DdeI CTNAG 5 cut(s) 45, 351, 737, 981, 1365
EaeI YGGCCR 1 cut(s) 813
Eam1104I CTCTTC 1 cut(s) 1257
EarI CTCTTC 1 cut(s) 1257
EciI GGCGGA 1 cut(s) 13
Eco130I CCWWGG 3 cut(s) 220, 369, 766
Eco31I GGTCTC 2 cut(s) 347, 430
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 2 cut(s) 29, 319
Eco57I CTGAAG 3 cut(s) 501, 1058, 1340
Eco91I GGTNACC 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 215
EcoRII CCWGG 1 cut(s) 501
EcoRV GATATC 1 cut(s) 277
EcoT14I CCWWGG 3 cut(s) 220, 369, 766
EcoT22I ATGCAT 1 cut(s) 447
ErhI CCWWGG 3 cut(s) 220, 369, 766
FaeI CATG 3 cut(s) 449, 1117, 1148
FatI CATG 3 cut(s) 445, 1113, 1144
FauI CCCGC 2 cut(s) 82, 1008
FauNDI CATATG 1 cut(s) 268
Fnu4HI GCNGC 6 cut(s) 14, 469, 589, 725, 1313, 1316
FokI GGATG 5 cut(s) 386, 526, 742, 745, 860
Fsp4HI GCNGC 6 cut(s) 14, 469, 589, 725, 1313, 1316
FspI TGCGCA 1 cut(s) 905
GlaI GCGC 1 cut(s) 905
GluI GCNGC 6 cut(s) 14, 469, 589, 725, 1313, 1316
GsaI CCCAGC 1 cut(s) 1072
GsuI CTGGAG 1 cut(s) 471
HaeIII GGCC 1 cut(s) 815
HapII CCGG 3 cut(s) 27, 32, 1301
HgaI GACGC 1 cut(s) 41
HhaI GCGC 1 cut(s) 906
Hin1II CATG 3 cut(s) 449, 1117, 1148
Hin6I GCGC 1 cut(s) 904
HinP1I GCGC 1 cut(s) 904
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HinfI GANTC 9 cut(s) 143, 540, 735, 777, 935, 949, 993, 1031, 1342
HpaII CCGG 3 cut(s) 27, 32, 1301
HphI GGTGA 1 cut(s) 988
Hpy166II GTNNAC 4 cut(s) 175, 805, 832, 1255
Hpy188III TCNNGA 8 cut(s) 427, 614, 640, 716, 1094, 1138, 1307, 1346
Hpy8I GTNNAC 4 cut(s) 175, 805, 832, 1255
Hpy99I CGWCG 1 cut(s) 57
HpyAV CCTTC 2 cut(s) 501, 772
HpyCH4III ACNGT 2 cut(s) 844, 1056
HpyCH4IV ACGT 2 cut(s) 810, 828
HpyCH4V TGCA 4 cut(s) 105, 385, 445, 885
HpyF10VI GCNNNNNNNGC 3 cut(s) 49, 730, 1321
HpyF3I CTNAG 5 cut(s) 45, 351, 737, 981, 1365
HpySE526I ACGT 2 cut(s) 810, 828
Hsp92II CATG 3 cut(s) 449, 1117, 1148
HspAI GCGC 1 cut(s) 904
KpnI GGTACC 2 cut(s) 39, 563
LmnI GCTCC 2 cut(s) 452, 850
Lsp1109I GCAGC 6 cut(s) 25, 480, 600, 711, 1324, 1327
LweI GCATC 5 cut(s) 114, 261, 321, 720, 1238
MaeII ACGT 2 cut(s) 810, 828
MaeIII GTNAC 2 cut(s) 215, 604
MboII GAAGA 7 cut(s) 241, 563, 655, 671, 1051, 1130, 1274
MflI RGATCY 2 cut(s) 661, 744
MhlI GDGCHC 1 cut(s) 293
MlsI TGGCCA 1 cut(s) 815
MluCI AATT 4 cut(s) 111, 519, 675, 693
MluNI TGGCCA 1 cut(s) 815
MlyI GAGTC 4 cut(s) 534, 729, 771, 943
MmeI TCCRAC 2 cut(s) 43, 892
Mox20I TGGCCA 1 cut(s) 815
Mph1103I ATGCAT 1 cut(s) 447
MroXI GAANNNNTTC 4 cut(s) 185, 486, 1055, 1341
MscI TGGCCA 1 cut(s) 815
MseI TTAA 2 cut(s) 297, 635
MslI CAYNNNNRTG 1 cut(s) 267
Msp20I TGGCCA 1 cut(s) 815
MspA1I CMGCKG 2 cut(s) 941, 1318
MspI CCGG 3 cut(s) 27, 32, 1301
MspR9I CCNGG 2 cut(s) 33, 503
Mva1269I GAATGC 1 cut(s) 481
MvaI CCWGG 1 cut(s) 503
MvnI CGCG 1 cut(s) 1029
MwoI GCNNNNNNNGC 3 cut(s) 49, 730, 1321
NciI CCSGG 1 cut(s) 33
NdeI CATATG 1 cut(s) 268
NlaIII CATG 3 cut(s) 449, 1117, 1148
NlaIV GGNNCC 4 cut(s) 37, 489, 561, 852
NmuCI GTSAC 1 cut(s) 604
NsbI TGCGCA 1 cut(s) 905
NsiI ATGCAT 1 cut(s) 447
NspI RCATGY 1 cut(s) 449
PaeI GCATGC 1 cut(s) 449
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 1 cut(s) 481
PdmI GAANNNNTTC 4 cut(s) 185, 486, 1055, 1341
PfeI GAWTC 5 cut(s) 143, 935, 993, 1031, 1342
PflMI CCANNNNNTGG 2 cut(s) 536, 748
PkrI GCNGC 6 cut(s) 15, 470, 590, 726, 1314, 1317
PleI GAGTC 4 cut(s) 534, 729, 771, 943
PpsI GAGTC 4 cut(s) 534, 729, 771, 943
PsiI TTATAA 1 cut(s) 699
Psp1406I AACGTT 1 cut(s) 828
Psp6I CCWGG 1 cut(s) 501
PspEI GGTNACC 1 cut(s) 215
PspFI CCCAGC 1 cut(s) 1068
PspGI CCWGG 1 cut(s) 501
PspN4I GGNNCC 4 cut(s) 37, 489, 561, 852
PspPI GGNCC 2 cut(s) 29, 319
PsrI GAACNNNNNNTAC 2 cut(s) 552, 584
PstNI CAGNNNCTG 1 cut(s) 1318
PsuI RGATCY 2 cut(s) 661, 744
PvuII CAGCTG 2 cut(s) 941, 1318
RsaI GTAC 3 cut(s) 37, 561, 1112
RsaNI GTAC 3 cut(s) 36, 560, 1111
RseI CAYNNNNRTG 1 cut(s) 267
Rsr2I CGGWCCG 1 cut(s) 29
RsrII CGGWCCG 1 cut(s) 29
SaqAI TTAA 2 cut(s) 297, 635
SatI GCNGC 6 cut(s) 14, 469, 589, 725, 1313, 1316
Sau96I GGNCC 2 cut(s) 29, 319
SchI GAGTC 4 cut(s) 534, 729, 771, 943
ScrFI CCNGG 2 cut(s) 33, 503
SduI GDGCHC 1 cut(s) 293
SfaNI GCATC 5 cut(s) 114, 261, 321, 720, 1238
SfcI CTRYAG 1 cut(s) 547
SinI GGWCC 2 cut(s) 29, 319
SmiMI CAYNNNNRTG 1 cut(s) 267
SphI GCATGC 1 cut(s) 449
Sse9I AATT 4 cut(s) 111, 519, 675, 693
SsiI CCGC 8 cut(s) 24, 75, 690, 727, 877, 898, 1001, 1027
StyD4I CCNGG 2 cut(s) 31, 501
StyI CCWWGG 3 cut(s) 220, 369, 766
TaaI ACNGT 2 cut(s) 844, 1056
TaiI ACGT 2 cut(s) 813, 831
TaqI TCGA 8 cut(s) 90, 395, 428, 582, 673, 912, 991, 1218
TasI AATT 4 cut(s) 111, 519, 675, 693
TatI WGTACW 1 cut(s) 1110
TfiI GAWTC 5 cut(s) 143, 935, 993, 1031, 1342
Tru1I TTAA 2 cut(s) 297, 635
Tru9I TTAA 2 cut(s) 297, 635
TscAI CASTG 1 cut(s) 613
TseFI GTSAC 1 cut(s) 604
TseI GCWGC 6 cut(s) 13, 468, 588, 724, 1312, 1315
Tsp45I GTSAC 1 cut(s) 604
TspDTI ATGAA 2 cut(s) 255, 1305
TspGWI ACGGA 4 cut(s) 315, 332, 526, 1272
TspRI CASTG 1 cut(s) 613
Van91I CCANNNNNTGG 2 cut(s) 536, 748
VpaK11BI GGWCC 2 cut(s) 29, 319
XapI RAATTY 1 cut(s) 111
XceI RCATGY 1 cut(s) 449
XmnI GAANNNNTTC 4 cut(s) 185, 486, 1055, 1341
Zsp2I ATGCAT 1 cut(s) 447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.