MD02G1072700.v1.1

Histone acetyltransferase type B catalytic

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
5889116 .. 5892401
3286 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1072700.v1.1.491

Sequence Viewer

Length: 1425 bp
ATGGTCCAGAAGCAAGGAGCCTCCGCCGATCCGACCGCCACCGAGCCTAAGAAACGACGTCGCGTCGGCTTCTCCAGCGTCGATTCTGGAGTGGAGGCCAAAGATTGCATCAAGATTTACCTGGTTTCTAGCAAAGAGGAAGTGGGTTCTACAGACAGTTTTTGTATTGAAGCTGTTGACTTGAATAGCTCTTTTGATGATGATGGGAAGATATATGGTTACAAAGGATTGAAGATTGCCATATGGGTTAGCAGTATTTCGTTTCATGCATATGCTGATATTGCATTTGAGAGCACAACTGATGGTGGCAAAGGGATCACCGATTTGAAATCAGATCTTCAGAAAATTTTTGCTGAGACCCTCATTGAGAGTGAAGAGGAGTTCCTTCAAACTTTTTCAACGCAGAGAAATTTGATTAGATCCATGGTCTCAACTGGGGAGGTGTTACAGCACAAGACCTCTATTGGACAAATAAGTGATTCTTATGGTGGGCTAGGAGCAACCACTTCTGATTTGCAGGTTGTTCGCTTGGTTGTTGGCAAGACAGCTGCTGGACACCTTTACAGTCACTTGATTCCTCTTGTTCTTCTTCTTGTTGATGGTAGCAGTCCGATTGATGTCGTGGATCCAAGATGGGAGTTGTATGTCCTGATCCAGAACAAAACAGATGAGAAAGGGGACATCTACAATGTATTGCTTGGTTTTACAGCTGTGTATCGTTTTTACCATTATCCTGATAGTTCTCGGTTGCGGCTCAGTCAGATATTGGTATTGCCTCCTTACCAACACAAGGGTTATGGACGATACCTTCTTGAGGTTCTCAATGATGTTGCAGTATCTGAAAACGTCTATGACCTCACTGTTGAAGAACCATTAGATTACTTCCAGCATGTACGTACTTGTGTTGATGTTCTGCGCCTTAACAAGTTCCATCCAATGAAGGATGCGGTTAACTCAGCAGTTTTGCAACTGAAGCAAGGAAAGTTGTCGAAGAAGACACACACTCCTCGGCTCATGCCAGCCACTAGTGTCATTGAGGATGCCCGAAAAAGTTTGAAAATTAACAAGAAACAGTTTCTTCAGTGCTGGGATGTTTTCCTCTATCTCTGGCTTGATCCTGTGGACAAGTACATGGCGGATTTTGTGGGAATTATTTCTAATCGCATGAAGGAAGATCTCATAGGAAAAGATTCTGGGGCCGGTGGAAAGCGAGTGGTTGAAGTTCCAAGCGAATATGAACCGGAGATGTCATTTGTTATGTTCAGGTCACAGGCCGGGGAAGCTGCTAGTACTGTTCAGATAGACGAAAATCAACCAAATCAGGAAGAGCAACTCCAGCAGTTAGTTGATGAGAGGGTAAAAGAGATCAAATCAATAGCTGAGAAAGTGTCTTCGCAGATCTCTGTCACTGCCGCGGCATCATAA

Protein Analysis

475

Amino Acids

52.91

Weight (kDa)

5.38

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hat1_N PF10394 31 - 200 4e-25 Histone acetyl transferase HAT1 N-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 61
Acc36I ACCTGC 1 cut(s) 508
AccII CGCG 2 cut(s) 63, 1415
AciI CCGC 7 cut(s) 24, 36, 751, 947, 1136, 1413, 1415
AclWI GGATC 7 cut(s) 23, 323, 414, 620, 633, 646, 1109
AcsI RAATTY 2 cut(s) 345, 409
AcuI CTGAAG 3 cut(s) 323, 992, 1064
AcyI GRCGYC 1 cut(s) 58
AfaI GTAC 4 cut(s) 894, 898, 1130, 1291
AfiI CCNNNNNNNGG 2 cut(s) 790, 814
AgsI TTSAA 9 cut(s) 170, 184, 232, 328, 389, 399, 866, 1057, 1220
AhdI GACNNNNNGTC 1 cut(s) 62
AhlI ACTAGT 1 cut(s) 1025
AjnI CCWGG 1 cut(s) 120
AluBI AGCT 6 cut(s) 173, 189, 548, 710, 1283, 1379
AluI AGCT 6 cut(s) 173, 189, 548, 710, 1283, 1379
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 2 cut(s) 350, 433
AlwI GGATC 7 cut(s) 23, 323, 414, 620, 633, 646, 1109
AlwNI CAGNNNCTG 2 cut(s) 551, 839
AoxI GGCC 3 cut(s) 96, 1197, 1272
ApeKI GCWGC 2 cut(s) 548, 1283
ApoI RAATTY 2 cut(s) 345, 409
Asp700I GAANNNNTTC 2 cut(s) 1153, 1189
AspLEI GCGC 1 cut(s) 918
AspS9I GGNCC 2 cut(s) 4, 1197
AsuC2I CCSGG 1 cut(s) 1276
AsuHPI GGTGA 1 cut(s) 310
AvaII GGWCC 1 cut(s) 4
BamHI GGATCC 1 cut(s) 625
BbsI GAAGAC 2 cut(s) 1001, 1383
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 2 cut(s) 535, 1270
BccI CCATC 5 cut(s) 197, 296, 593, 627, 939
BcgI CGANNNNNNTGC 2 cut(s) 506, 540
BciT130I CCWGG 1 cut(s) 122
BcnI CCSGG 1 cut(s) 1276
BcoDI GTCTC 2 cut(s) 350, 433
BcuI ACTAGT 1 cut(s) 1025
BfaI CTAG 4 cut(s) 129, 494, 1026, 1287
BfmI CTRYAG 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 508
BglII AGATCT 3 cut(s) 334, 1174, 1398
BisI GCNGC 5 cut(s) 549, 752, 1284, 1413, 1416
BlsI GCNGC 5 cut(s) 550, 753, 1285, 1414, 1417
BmcAI AGTACT 1 cut(s) 1291
Bme1390I CCNGG 2 cut(s) 122, 1276
Bme18I GGWCC 1 cut(s) 4
BmeRI GACNNNNNGTC 1 cut(s) 62
BmgT120I GGNCC 2 cut(s) 4, 1197
BmiI GGNNCC 3 cut(s) 19, 627, 1198
BmrFI CCNGG 2 cut(s) 122, 1276
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 3 cut(s) 117, 934, 1030
BmuI ACTGGG 1 cut(s) 444
BpiI GAAGAC 2 cut(s) 1001, 1383
BpmI CTGGAG 3 cut(s) 58, 108, 1319
BpuEI CTTGAG 1 cut(s) 833
BpuMI CCSGG 1 cut(s) 1276
BsaAI YACGTR 1 cut(s) 896
BsaHI GRCGYC 1 cut(s) 58
BsaI GGTCTC 2 cut(s) 350, 433
BsaJI CCNNGG 4 cut(s) 423, 1007, 1275, 1413
BsaWI WCCGGW 1 cut(s) 1240
BsaXI ACNNNNNCTCC 2 cut(s) 988, 1018
Bsc4I CCNNNNNNNGG 2 cut(s) 790, 814
Bse118I RCCGGY 1 cut(s) 1199
Bse1I ACTGG 1 cut(s) 439
BseBI CCWGG 1 cut(s) 122
BseDI CCNNGG 4 cut(s) 423, 1007, 1275, 1413
BseGI GGATG 4 cut(s) 931, 949, 1045, 1096
BseLI CCNNNNNNNGG 2 cut(s) 790, 814
BseMII CTCAG 4 cut(s) 345, 769, 969, 1371
BseNI ACTGG 1 cut(s) 439
BseRI GAGGAG 2 cut(s) 392, 996
BseXI GCAGC 2 cut(s) 535, 1270
BseYI CCCAGC 1 cut(s) 1086
Bsh1236I CGCG 2 cut(s) 63, 1415
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 3 cut(s) 98, 1199, 1274
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 296
BsiSI CCGG 3 cut(s) 1200, 1241, 1275
BslFI GGGAC 1 cut(s) 692
BslI CCNNNNNNNGG 2 cut(s) 790, 814
BsmAI GTCTC 2 cut(s) 350, 433
BsmFI GGGAC 1 cut(s) 692
BsnI GGCC 3 cut(s) 98, 1199, 1274
Bso31I GGTCTC 2 cut(s) 350, 433
Bsp1286I GDGCHC 1 cut(s) 296
Bsp19I CCATGG 1 cut(s) 423
BspACI CCGC 7 cut(s) 24, 36, 751, 947, 1136, 1413, 1415
BspANI GGCC 3 cut(s) 98, 1199, 1274
BspCNI CTCAG 4 cut(s) 346, 768, 968, 1372
BspFNI CGCG 2 cut(s) 63, 1415
BspLI GGNNCC 3 cut(s) 19, 627, 1198
BspMI ACCTGC 1 cut(s) 508
BspPI GGATC 7 cut(s) 23, 323, 414, 620, 633, 646, 1109
BspQI GCTCTTC 1 cut(s) 1320
BspTNI GGTCTC 2 cut(s) 350, 433
BsrFI RCCGGY 1 cut(s) 1199
BsrI ACTGG 1 cut(s) 439
BssAI RCCGGY 1 cut(s) 1199
BssECI CCNNGG 4 cut(s) 423, 1007, 1275, 1413
BssNI GRCGYC 1 cut(s) 58
BssT1I CCWWGG 1 cut(s) 423
Bst2UI CCWGG 1 cut(s) 122
Bst4CI ACNGT 5 cut(s) 158, 566, 862, 1074, 1294
Bst6I CTCTTC 2 cut(s) 369, 1320
BstACI GRCGYC 1 cut(s) 58
BstBAI YACGTR 1 cut(s) 896
BstC8I GCNNGC 1 cut(s) 1020
BstDEI CTNAG 5 cut(s) 48, 354, 755, 955, 1380
BstDSI CCRYGG 2 cut(s) 423, 1413
BstENI CCTNNNNNAGG 1 cut(s) 812
BstF5I GGATG 4 cut(s) 931, 949, 1045, 1096
BstFNI CGCG 2 cut(s) 63, 1415
BstHHI GCGC 1 cut(s) 918
BstMAI GTCTC 2 cut(s) 350, 433
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 5 cut(s) 75, 281, 973, 1280, 1336
BstNI CCWGG 1 cut(s) 122
BstNSI RCATGY 1 cut(s) 893
BstSCI CCNGG 2 cut(s) 120, 1274
BstSFI CTRYAG 1 cut(s) 150
BstSNI TACGTA 1 cut(s) 896
BstUI CGCG 2 cut(s) 63, 1415
BstV1I GCAGC 2 cut(s) 535, 1270
BstV2I GAAGAC 2 cut(s) 1001, 1383
BstX2I RGATCY 5 cut(s) 334, 419, 625, 1174, 1398
BstYI RGATCY 5 cut(s) 334, 419, 625, 1174, 1398
BsuRI GGCC 3 cut(s) 98, 1199, 1274
BtgI CCRYGG 2 cut(s) 423, 1413
BtsCI GGATG 4 cut(s) 931, 949, 1045, 1096
BtsI GCAGTG 1 cut(s) 1407
BtsIMutI CAGTG 3 cut(s) 858, 1088, 1407
BveI ACCTGC 1 cut(s) 508
Cac8I GCNNGC 1 cut(s) 1020
CaiI CAGNNNCTG 2 cut(s) 551, 839
CfoI GCGC 1 cut(s) 918
Cfr10I RCCGGY 1 cut(s) 1199
Cfr13I GGNCC 2 cut(s) 4, 1197
Cfr42I CCGCGG 1 cut(s) 1416
CseI GACGC 2 cut(s) 52, 67
CsiI ACCWGGT 1 cut(s) 120
Csp6I GTAC 4 cut(s) 893, 897, 1129, 1290
CviAII CATG 6 cut(s) 266, 424, 890, 1015, 1132, 1165
CviQI GTAC 4 cut(s) 893, 897, 1129, 1290
DdeI CTNAG 5 cut(s) 48, 354, 755, 955, 1380
DriI GACNNNNNGTC 1 cut(s) 62
Eam1104I CTCTTC 2 cut(s) 369, 1320
Eam1105I GACNNNNNGTC 1 cut(s) 62
EarI CTCTTC 2 cut(s) 369, 1320
EciI GGCGGA 2 cut(s) 13, 1151
Eco105I TACGTA 1 cut(s) 896
Eco130I CCWWGG 1 cut(s) 423
Eco31I GGTCTC 2 cut(s) 350, 433
Eco47I GGWCC 1 cut(s) 4
Eco57I CTGAAG 3 cut(s) 323, 992, 1064
EcoNI CCTNNNNNAGG 1 cut(s) 812
EcoRII CCWGG 1 cut(s) 120
EcoT14I CCWWGG 1 cut(s) 423
EcoT22I ATGCAT 1 cut(s) 271
ErhI CCWWGG 1 cut(s) 423
FaeI CATG 6 cut(s) 269, 427, 893, 1018, 1135, 1168
FalI AAGNNNNNCTT 2 cut(s) 466, 498
FaqI GGGAC 1 cut(s) 692
FatI CATG 6 cut(s) 265, 423, 889, 1014, 1131, 1164
FauNDI CATATG 2 cut(s) 242, 271
Fnu4HI GCNGC 5 cut(s) 549, 752, 1284, 1413, 1416
FokI GGATG 4 cut(s) 918, 956, 1052, 1103
Fsp4HI GCNGC 5 cut(s) 549, 752, 1284, 1413, 1416
FspBI CTAG 4 cut(s) 129, 494, 1026, 1287
GlaI GCGC 1 cut(s) 917
GluI GCNGC 5 cut(s) 549, 752, 1284, 1413, 1416
GsaI CCCAGC 1 cut(s) 1090
GsuI CTGGAG 3 cut(s) 58, 108, 1319
HaeIII GGCC 3 cut(s) 98, 1199, 1274
HapII CCGG 3 cut(s) 1200, 1241, 1275
HgaI GACGC 2 cut(s) 52, 67
HhaI GCGC 1 cut(s) 918
Hin1I GRCGYC 1 cut(s) 58
Hin1II CATG 6 cut(s) 269, 427, 893, 1018, 1135, 1168
Hin6I GCGC 1 cut(s) 916
HinP1I GCGC 1 cut(s) 916
HincII GTYRAC 2 cut(s) 178, 952
HindII GTYRAC 2 cut(s) 178, 952
HinfI GANTC 4 cut(s) 83, 479, 574, 1190
HpaI GTTAAC 1 cut(s) 952
HpaII CCGG 3 cut(s) 1200, 1241, 1275
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 3 cut(s) 178, 952, 1123
Hpy188I TCNGA 8 cut(s) 33, 334, 342, 511, 612, 762, 841, 1299
Hpy188III TCNNGA 8 cut(s) 7, 87, 112, 649, 655, 734, 812, 1322
Hpy8I GTNNAC 3 cut(s) 178, 952, 1123
Hpy99I CGWCG 4 cut(s) 60, 63, 68, 83
HpyAV CCTTC 4 cut(s) 395, 818, 934, 1162
HpyCH4III ACNGT 5 cut(s) 158, 566, 862, 1074, 1294
HpyCH4IV ACGT 3 cut(s) 58, 846, 895
HpyCH4V TGCA 6 cut(s) 108, 269, 284, 517, 833, 967
HpyF10VI GCNNNNNNNGC 5 cut(s) 75, 281, 973, 1280, 1336
HpyF3I CTNAG 5 cut(s) 48, 354, 755, 955, 1380
HpySE526I ACGT 3 cut(s) 58, 846, 895
Hsp92I GRCGYC 1 cut(s) 58
Hsp92II CATG 6 cut(s) 269, 427, 893, 1018, 1135, 1168
HspAI GCGC 1 cut(s) 916
KspAI GTTAAC 1 cut(s) 952
KspI CCGCGG 1 cut(s) 1416
LguI GCTCTTC 1 cut(s) 1320
LmnI GCTCC 2 cut(s) 17, 497
Lsp1109I GCAGC 2 cut(s) 535, 1270
LweI GCATC 3 cut(s) 117, 934, 1030
MabI ACCWGGT 1 cut(s) 120
MaeI CTAG 4 cut(s) 129, 494, 1026, 1287
MaeII ACGT 3 cut(s) 58, 846, 895
MaeIII GTNAC 5 cut(s) 218, 444, 566, 1266, 1405
MflI RGATCY 5 cut(s) 334, 419, 625, 1174, 1398
MhlI GDGCHC 1 cut(s) 296
MluCI AATT 4 cut(s) 345, 409, 1059, 1149
MmeI TCCRAC 1 cut(s) 56
Mph1103I ATGCAT 1 cut(s) 271
MroXI GAANNNNTTC 2 cut(s) 1153, 1189
MseI TTAA 3 cut(s) 921, 951, 1062
MslI CAYNNNNRTG 1 cut(s) 270
MspA1I CMGCKG 3 cut(s) 548, 710, 1415
MspI CCGG 3 cut(s) 1200, 1241, 1275
MspR9I CCNGG 2 cut(s) 122, 1276
MvaI CCWGG 1 cut(s) 122
MvnI CGCG 2 cut(s) 63, 1415
MwoI GCNNNNNNNGC 5 cut(s) 75, 281, 973, 1280, 1336
NciI CCSGG 1 cut(s) 1276
NcoI CCATGG 1 cut(s) 423
NdeI CATATG 2 cut(s) 242, 271
NlaIII CATG 6 cut(s) 269, 427, 893, 1018, 1135, 1168
NlaIV GGNNCC 3 cut(s) 19, 627, 1198
NmeAIII GCCGAG 1 cut(s) 988
NmuCI GTSAC 3 cut(s) 566, 1266, 1405
NsiI ATGCAT 1 cut(s) 271
NspI RCATGY 1 cut(s) 893
PciSI GCTCTTC 1 cut(s) 1320
PdmI GAANNNNTTC 2 cut(s) 1153, 1189
PfeI GAWTC 4 cut(s) 83, 479, 574, 1190
PkrI GCNGC 5 cut(s) 550, 753, 1285, 1414, 1417
Ppu21I YACGTR 1 cut(s) 896
Psp6I CCWGG 1 cut(s) 120
PspFI CCCAGC 1 cut(s) 1086
PspGI CCWGG 1 cut(s) 120
PspN4I GGNNCC 3 cut(s) 19, 627, 1198
PspPI GGNCC 2 cut(s) 4, 1197
PstNI CAGNNNCTG 2 cut(s) 551, 839
PsuI RGATCY 5 cut(s) 334, 419, 625, 1174, 1398
PvuII CAGCTG 2 cut(s) 548, 710
RsaI GTAC 4 cut(s) 894, 898, 1130, 1291
RsaNI GTAC 4 cut(s) 893, 897, 1129, 1290
RseI CAYNNNNRTG 1 cut(s) 270
SacII CCGCGG 1 cut(s) 1416
SapI GCTCTTC 1 cut(s) 1320
SaqAI TTAA 3 cut(s) 921, 951, 1062
SatI GCNGC 5 cut(s) 549, 752, 1284, 1413, 1416
Sau96I GGNCC 2 cut(s) 4, 1197
ScaI AGTACT 1 cut(s) 1291
ScrFI CCNGG 2 cut(s) 122, 1276
SduI GDGCHC 1 cut(s) 296
SexAI ACCWGGT 1 cut(s) 120
SfaNI GCATC 3 cut(s) 117, 934, 1030
SfcI CTRYAG 1 cut(s) 150
Sfr303I CCGCGG 1 cut(s) 1416
SgrBI CCGCGG 1 cut(s) 1416
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 1 cut(s) 270
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
SnaBI TACGTA 1 cut(s) 896
SpeI ACTAGT 1 cut(s) 1025
Sse9I AATT 4 cut(s) 345, 409, 1059, 1149
SsiI CCGC 7 cut(s) 24, 36, 751, 947, 1136, 1413, 1415
SspMI CTAG 4 cut(s) 129, 494, 1026, 1287
StyD4I CCNGG 2 cut(s) 120, 1274
StyI CCWWGG 1 cut(s) 423
TaaI ACNGT 5 cut(s) 158, 566, 862, 1074, 1294
TaiI ACGT 3 cut(s) 61, 849, 898
TaqI TCGA 2 cut(s) 81, 989
TasI AATT 4 cut(s) 345, 409, 1059, 1149
TatI WGTACW 2 cut(s) 1128, 1289
TauI GCSGC 3 cut(s) 754, 1415, 1418
TfiI GAWTC 4 cut(s) 83, 479, 574, 1190
Tru1I TTAA 3 cut(s) 921, 951, 1062
Tru9I TTAA 3 cut(s) 921, 951, 1062
TscAI CASTG 3 cut(s) 865, 1088, 1414
TseFI GTSAC 3 cut(s) 566, 1266, 1405
TseI GCWGC 2 cut(s) 548, 1283
Tsp45I GTSAC 3 cut(s) 566, 1266, 1405
TspDTI ATGAA 4 cut(s) 254, 953, 1181, 1251
TspRI CASTG 3 cut(s) 865, 1088, 1414
VpaK11BI GGWCC 1 cut(s) 4
XagI CCTNNNNNAGG 1 cut(s) 812
XapI RAATTY 2 cut(s) 345, 409
XceI RCATGY 1 cut(s) 893
XmnI GAANNNNTTC 2 cut(s) 1153, 1189
XspI CTAG 4 cut(s) 129, 494, 1026, 1287
ZraI GACGTC 1 cut(s) 59
ZrmI AGTACT 1 cut(s) 1291
Zsp2I ATGCAT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.