pycom15g17990

Histone acetyltransferase type B catalytic

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
12765735 .. 12768659
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g17990.2

Sequence Viewer

Length: 1464 bp
ATGGTGCAGAAGCAAGGAGCCTCCGCCGATCCCACCGCCACCGAACCTAAGAAACGACGTCGCGTCGGCTTCTCCAGCGTCGATGCTGGACTGGAGGCCAAAGATTGCATCAAGATTTACCTAGTTTCTAGCAAAGAGGAAGTGGGTTCTACAGACAGTTTTTGTATTGAGCCTGTTGATTTGAATAGCTCTTTTGATGATGATGGGAAGATATATGGTTACAAAGGATTGAAGATTACGATATGGGTTAGCAGTTTATCCTTTCATGCGTATGCTGATATTGCATTTGAGAGCACAACTGATGGTGGAAAAGGGATCACCGATTTGAAAGCAGCTCTTCAGAGAATTTTTGCTGAGACCCTCGTTGAGAGTGAAGAGGAGTTCCTTCAAACTTTTTCGACGCAGAAGAATTTGATTAGATACATGGTCACAACTGGGGAGGTGTTACAGTGCAAGACCTCTAATGGACAAATAAGTTATTGTAGTGGTCAGCTTGGAGCAACCACTTCTGATTTGCAGGTTGTTCGCTTGGTTGTGGGCAAGACAGCTGCTGGGAACCTTTACAGTCACTTGATTCCTCTTGTTCTTCTTCTTGTTGATGGTAATCTCTTCACTTACCTTGTCTTATCAGACAACACTGGTAGCAGTCCGATCAATGTCGTGGATCCAAGATGGGAGCTGTATGTCCTGATCCAGAACAAAATAGATGAGAAGGGGGACATCTACAATATATTGCTTGGTTTAACAGCTGTTTATCGTTTTTACCATTATCCTGATAGTTCTCGGTTGCGGCTCAGTCAGATATTGGTATTGCCTCCTTACCAACACAAGGGTTATGGACGATACCTTCTTGAGGCTCTCAATGATGTTGCAGTATCTGAAAACGTCCATGACCTCACAGTTGAAGAACCATTAGATTACTTCCAACATGTACGTACTTGTGTTGATGTACTACGCCTTCATAAGTTCGACCCAATCAAGGATGCAGTTAACTCAGCAGTTTCACAACTGAAGCAAGGAAAGTTGTCGAAGAAGACACACACTCCTCGACTCATGCCAGCTACTAGTGTCATTGAGGATGCCCGGAAAAGTTTGAAAATTAACAAGAAACAGTTTCTTCAGTGCTGGGATGTTTTCCTTTATATCGGCCTTGATCCTGTGGACAAGTACATGGAGGATTTTGTGGGAATTATTTCTAATCGCATGAAGGAAGATCTCATAGGAAAAGATTCTGGGGCGGGTGGGAAGCGAGTGGTAGAAGTTCCAAGCGAATATGAGCCGGAGATGTCATTTGTCATGTTCAGGTCACAGGCCGGTGAAGCTACTGGTACTGTTCAGATAGACGAAAATCAACCAAATCAGGAAGAGCAACTCCAGCAGTTAGTTGAGGAGAGAGTGAAAGAGATCAAATCAGTAGCTGAGAAATTGTCTTCGCAGATCTCCCTCATTTCGGAGGCATCATAA

Protein Analysis

488

Amino Acids

54.36

Weight (kDa)

5.27

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 61
Acc36I ACCTGC 1 cut(s) 508
AccII CGCG 1 cut(s) 63
AciI CCGC 4 cut(s) 24, 36, 790, 1238
AclWI GGATC 6 cut(s) 23, 323, 659, 672, 685, 1148
AcsI RAATTY 2 cut(s) 345, 409
AcuI CTGAAG 3 cut(s) 323, 1031, 1103
AcyI GRCGYC 1 cut(s) 58
AfaI GTAC 5 cut(s) 933, 937, 951, 1169, 1330
AfiI CCNNNNNNNGG 4 cut(s) 829, 853, 979, 1450
AflIII ACRYGT 1 cut(s) 928
AgsI TTSAA 6 cut(s) 184, 232, 328, 389, 905, 1096
AhdI GACNNNNNGTC 1 cut(s) 62
AhlI ACTAGT 1 cut(s) 1064
AluBI AGCT 9 cut(s) 189, 335, 493, 548, 679, 749, 1061, 1322, 1418
AluI AGCT 9 cut(s) 189, 335, 493, 548, 679, 749, 1061, 1322, 1418
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 1 cut(s) 350
AlwI GGATC 6 cut(s) 23, 323, 659, 672, 685, 1148
AlwNI CAGNNNCTG 3 cut(s) 551, 878, 1418
AoxI GGCC 3 cut(s) 96, 1147, 1311
ApeKI GCWGC 2 cut(s) 332, 548
ApoI RAATTY 2 cut(s) 345, 409
Asp700I GAANNNNTTC 2 cut(s) 1192, 1228
AsuC2I CCSGG 1 cut(s) 1084
AsuHPI GGTGA 2 cut(s) 310, 1328
BamHI GGATCC 1 cut(s) 664
BarI GAAGNNNNNNTAC 2 cut(s) 942, 974
BbsI GAAGAC 2 cut(s) 1040, 1422
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 2 cut(s) 344, 535
BccI CCATC 4 cut(s) 197, 296, 593, 666
BcgI CGANNNNNNTGC 2 cut(s) 506, 540
BcnI CCSGG 1 cut(s) 1084
BcoDI GTCTC 1 cut(s) 350
BcuI ACTAGT 1 cut(s) 1064
BfaI CTAG 3 cut(s) 122, 129, 1065
BfmI CTRYAG 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 508
BglII AGATCT 2 cut(s) 1213, 1437
BisI GCNGC 3 cut(s) 333, 549, 791
BlsI GCNGC 3 cut(s) 334, 550, 792
Bme1390I CCNGG 1 cut(s) 1084
BmeRI GACNNNNNGTC 1 cut(s) 62
BmiI GGNNCC 3 cut(s) 19, 557, 666
BmrFI CCNGG 1 cut(s) 1084
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 4 cut(s) 73, 117, 973, 1069
BmuI ACTGGG 1 cut(s) 444
BpiI GAAGAC 2 cut(s) 1040, 1422
BpmI CTGGAG 3 cut(s) 58, 113, 1358
BpuEI CTTGAG 1 cut(s) 872
BpuMI CCSGG 1 cut(s) 1084
BsaAI YACGTR 1 cut(s) 935
BsaBI GATNNNNATC 1 cut(s) 603
BsaHI GRCGYC 1 cut(s) 58
BsaI GGTCTC 1 cut(s) 350
BsaXI ACNNNNNCTCC 2 cut(s) 1027, 1057
Bsc4I CCNNNNNNNGG 4 cut(s) 829, 853, 979, 1450
Bse118I RCCGGY 1 cut(s) 1313
Bse1I ACTGG 4 cut(s) 96, 439, 643, 1330
Bse8I GATNNNNATC 1 cut(s) 603
BseGI GGATG 3 cut(s) 988, 1084, 1135
BseJI GATNNNNATC 1 cut(s) 603
BseLI CCNNNNNNNGG 4 cut(s) 829, 853, 979, 1450
BseMII CTCAG 4 cut(s) 345, 808, 1008, 1410
BseNI ACTGG 4 cut(s) 96, 439, 643, 1330
BseRI GAGGAG 3 cut(s) 392, 1035, 1403
BseXI GCAGC 2 cut(s) 344, 535
BseYI CCCAGC 2 cut(s) 551, 1125
BsgI GTGCAG 1 cut(s) 26
Bsh1236I CGCG 1 cut(s) 63
BshFI GGCC 3 cut(s) 98, 1149, 1313
BsiHKAI GWGCWC 1 cut(s) 296
BsiSI CCGG 3 cut(s) 1084, 1280, 1314
BslFI GGGAC 1 cut(s) 731
BslI CCNNNNNNNGG 4 cut(s) 829, 853, 979, 1450
BsmAI GTCTC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 731
BsnI GGCC 3 cut(s) 98, 1149, 1313
Bso31I GGTCTC 1 cut(s) 350
Bsp1286I GDGCHC 1 cut(s) 296
Bsp143I GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
BspACI CCGC 4 cut(s) 24, 36, 790, 1238
BspANI GGCC 3 cut(s) 98, 1149, 1313
BspCNI CTCAG 4 cut(s) 346, 807, 1007, 1411
BspFNI CGCG 1 cut(s) 63
BspLI GGNNCC 3 cut(s) 19, 557, 666
BspMI ACCTGC 1 cut(s) 508
BspPI GGATC 6 cut(s) 23, 323, 659, 672, 685, 1148
BspQI GCTCTTC 2 cut(s) 342, 1359
BspTNI GGTCTC 1 cut(s) 350
BsrFI RCCGGY 1 cut(s) 1313
BsrI ACTGG 4 cut(s) 96, 439, 643, 1330
BssAI RCCGGY 1 cut(s) 1313
BssMI GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
BssNI GRCGYC 1 cut(s) 58
Bst4CI ACNGT 6 cut(s) 158, 450, 566, 901, 1113, 1333
Bst6I CTCTTC 4 cut(s) 342, 369, 614, 1359
BstACI GRCGYC 1 cut(s) 58
BstBAI YACGTR 1 cut(s) 935
BstC8I GCNNGC 1 cut(s) 1059
BstDEI CTNAG 5 cut(s) 48, 354, 794, 994, 1419
BstENI CCTNNNNNAGG 1 cut(s) 851
BstF5I GGATG 3 cut(s) 988, 1084, 1135
BstFNI CGCG 1 cut(s) 63
BstKTI GATC 9 cut(s) 31, 318, 654, 667, 693, 1156, 1216, 1407, 1440
BstMAI GTCTC 1 cut(s) 350
BstMBI GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
BstMWI GCNNNNNNNGC 4 cut(s) 75, 281, 1319, 1375
BstNSI RCATGY 1 cut(s) 932
BstSCI CCNGG 1 cut(s) 1082
BstSFI CTRYAG 1 cut(s) 150
BstSNI TACGTA 1 cut(s) 935
BstUI CGCG 1 cut(s) 63
BstV1I GCAGC 2 cut(s) 344, 535
BstV2I GAAGAC 2 cut(s) 1040, 1422
BstX2I RGATCY 3 cut(s) 664, 1213, 1437
BstYI RGATCY 3 cut(s) 664, 1213, 1437
BsuRI GGCC 3 cut(s) 98, 1149, 1313
BtsCI GGATG 3 cut(s) 988, 1084, 1135
BtsIMutI CAGTG 3 cut(s) 455, 636, 1127
BveI ACCTGC 1 cut(s) 508
Cac8I GCNNGC 1 cut(s) 1059
CaiI CAGNNNCTG 3 cut(s) 551, 878, 1418
Cfr10I RCCGGY 1 cut(s) 1313
CseI GACGC 3 cut(s) 52, 67, 409
Csp6I GTAC 5 cut(s) 932, 936, 950, 1168, 1329
CviAII CATG 8 cut(s) 266, 424, 890, 929, 1054, 1171, 1204, 1297
CviQI GTAC 5 cut(s) 932, 936, 950, 1168, 1329
DdeI CTNAG 5 cut(s) 48, 354, 794, 994, 1419
DpnI GATC 9 cut(s) 30, 317, 653, 666, 692, 1155, 1215, 1406, 1439
DpnII GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
DriI GACNNNNNGTC 1 cut(s) 62
Eam1104I CTCTTC 4 cut(s) 342, 369, 614, 1359
Eam1105I GACNNNNNGTC 1 cut(s) 62
EarI CTCTTC 4 cut(s) 342, 369, 614, 1359
EciI GGCGGA 1 cut(s) 13
Eco105I TACGTA 1 cut(s) 935
Eco31I GGTCTC 1 cut(s) 350
Eco57I CTGAAG 3 cut(s) 323, 1031, 1103
EcoNI CCTNNNNNAGG 1 cut(s) 851
FaeI CATG 8 cut(s) 269, 427, 893, 932, 1057, 1174, 1207, 1300
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 1 cut(s) 731
FatI CATG 8 cut(s) 265, 423, 889, 928, 1053, 1170, 1203, 1296
FauI CCCGC 1 cut(s) 1231
Fnu4HI GCNGC 3 cut(s) 333, 549, 791
FokI GGATG 3 cut(s) 995, 1091, 1142
Fsp4HI GCNGC 3 cut(s) 333, 549, 791
FspBI CTAG 3 cut(s) 122, 129, 1065
GluI GCNGC 3 cut(s) 333, 549, 791
GsaI CCCAGC 2 cut(s) 555, 1129
GsuI CTGGAG 3 cut(s) 58, 113, 1358
HaeIII GGCC 3 cut(s) 98, 1149, 1313
HapII CCGG 3 cut(s) 1084, 1280, 1314
HgaI GACGC 3 cut(s) 52, 67, 409
Hin1I GRCGYC 1 cut(s) 58
Hin1II CATG 8 cut(s) 269, 427, 893, 932, 1057, 1174, 1207, 1300
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HinfI GANTC 3 cut(s) 574, 1050, 1229
HpaI GTTAAC 1 cut(s) 991
HpaII CCGG 3 cut(s) 1084, 1280, 1314
HphI GGTGA 2 cut(s) 310, 1328
Hpy166II GTNNAC 2 cut(s) 991, 1162
Hpy188I TCNGA 8 cut(s) 342, 511, 631, 651, 801, 880, 1338, 1453
Hpy188III TCNNGA 6 cut(s) 112, 688, 694, 773, 851, 1361
Hpy8I GTNNAC 2 cut(s) 991, 1162
Hpy99I CGWCG 5 cut(s) 60, 63, 68, 83, 403
HpyAV CCTTC 5 cut(s) 395, 706, 857, 968, 1201
HpyCH4III ACNGT 6 cut(s) 158, 450, 566, 901, 1113, 1333
HpyCH4IV ACGT 3 cut(s) 58, 885, 934
HpyCH4V TGCA 7 cut(s) 7, 108, 284, 453, 517, 872, 986
HpyF10VI GCNNNNNNNGC 4 cut(s) 75, 281, 1319, 1375
HpyF3I CTNAG 5 cut(s) 48, 354, 794, 994, 1419
HpySE526I ACGT 3 cut(s) 58, 885, 934
Hsp92I GRCGYC 1 cut(s) 58
Hsp92II CATG 8 cut(s) 269, 427, 893, 932, 1057, 1174, 1207, 1300
KspAI GTTAAC 1 cut(s) 991
Kzo9I GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
LguI GCTCTTC 2 cut(s) 342, 1359
LmnI GCTCC 3 cut(s) 17, 497, 676
Lsp1109I GCAGC 2 cut(s) 344, 535
LweI GCATC 4 cut(s) 73, 117, 973, 1069
MaeI CTAG 3 cut(s) 122, 129, 1065
MaeII ACGT 3 cut(s) 58, 885, 934
MaeIII GTNAC 5 cut(s) 218, 427, 444, 566, 1305
MalI GATC 9 cut(s) 30, 317, 653, 666, 692, 1155, 1215, 1406, 1439
MboI GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
MflI RGATCY 3 cut(s) 664, 1213, 1437
MhlI GDGCHC 1 cut(s) 296
MluCI AATT 5 cut(s) 345, 409, 1098, 1188, 1424
MlyI GAGTC 1 cut(s) 1044
MmeI TCCRAC 1 cut(s) 949
MroXI GAANNNNTTC 2 cut(s) 1192, 1228
MseI TTAA 3 cut(s) 743, 990, 1101
MslI CAYNNNNRTG 1 cut(s) 270
MspA1I CMGCKG 2 cut(s) 548, 749
MspI CCGG 3 cut(s) 1084, 1280, 1314
MspR9I CCNGG 1 cut(s) 1084
MvnI CGCG 1 cut(s) 63
MwoI GCNNNNNNNGC 4 cut(s) 75, 281, 1319, 1375
NciI CCSGG 1 cut(s) 1084
NdeII GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
NlaIII CATG 8 cut(s) 269, 427, 893, 932, 1057, 1174, 1207, 1300
NlaIV GGNNCC 3 cut(s) 19, 557, 666
NmuCI GTSAC 3 cut(s) 427, 566, 1305
NspI RCATGY 1 cut(s) 932
PciI ACATGT 1 cut(s) 928
PciSI GCTCTTC 2 cut(s) 342, 1359
PdmI GAANNNNTTC 2 cut(s) 1192, 1228
PfeI GAWTC 2 cut(s) 574, 1229
PkrI GCNGC 3 cut(s) 334, 550, 792
PleI GAGTC 1 cut(s) 1044
PpsI GAGTC 1 cut(s) 1044
Ppu21I YACGTR 1 cut(s) 935
PscI ACATGT 1 cut(s) 928
PspFI CCCAGC 2 cut(s) 551, 1125
PspN4I GGNNCC 3 cut(s) 19, 557, 666
PstNI CAGNNNCTG 3 cut(s) 551, 878, 1418
PsuI RGATCY 3 cut(s) 664, 1213, 1437
PvuII CAGCTG 2 cut(s) 548, 749
RsaI GTAC 5 cut(s) 933, 937, 951, 1169, 1330
RsaNI GTAC 5 cut(s) 932, 936, 950, 1168, 1329
RseI CAYNNNNRTG 1 cut(s) 270
SapI GCTCTTC 2 cut(s) 342, 1359
SaqAI TTAA 3 cut(s) 743, 990, 1101
SatI GCNGC 3 cut(s) 333, 549, 791
Sau3AI GATC 9 cut(s) 28, 315, 651, 664, 690, 1153, 1213, 1404, 1437
SchI GAGTC 1 cut(s) 1044
ScrFI CCNGG 1 cut(s) 1084
SduI GDGCHC 1 cut(s) 296
SfaNI GCATC 4 cut(s) 73, 117, 973, 1069
SfcI CTRYAG 1 cut(s) 150
SmiMI CAYNNNNRTG 1 cut(s) 270
SmlI CTYRAG 1 cut(s) 851
SmoI CTYRAG 1 cut(s) 851
SnaBI TACGTA 1 cut(s) 935
SpeI ACTAGT 1 cut(s) 1064
Sse9I AATT 5 cut(s) 345, 409, 1098, 1188, 1424
SsiI CCGC 4 cut(s) 24, 36, 790, 1238
SspMI CTAG 3 cut(s) 122, 129, 1065
StyD4I CCNGG 1 cut(s) 1082
TaaI ACNGT 6 cut(s) 158, 450, 566, 901, 1113, 1333
TaiI ACGT 3 cut(s) 61, 888, 937
TaqI TCGA 5 cut(s) 81, 398, 969, 1028, 1048
TasI AATT 5 cut(s) 345, 409, 1098, 1188, 1424
TatI WGTACW 2 cut(s) 949, 1167
TauI GCSGC 1 cut(s) 793
TfiI GAWTC 2 cut(s) 574, 1229
Tru1I TTAA 3 cut(s) 743, 990, 1101
Tru9I TTAA 3 cut(s) 743, 990, 1101
TscAI CASTG 3 cut(s) 455, 643, 1127
TseFI GTSAC 3 cut(s) 427, 566, 1305
TseI GCWGC 2 cut(s) 332, 548
Tsp45I GTSAC 3 cut(s) 427, 566, 1305
TspDTI ATGAA 3 cut(s) 254, 950, 1220
TspRI CASTG 3 cut(s) 455, 643, 1127
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 2 cut(s) 345, 409
XceI RCATGY 1 cut(s) 932
XmnI GAANNNNTTC 2 cut(s) 1192, 1228
XspI CTAG 3 cut(s) 122, 129, 1065
ZraI GACGTC 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.