Rroxscaffold_2G00147670

Histone acetyltransferase type B catalytic

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
85388752 .. 85400897
12146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00147670.1

Sequence Viewer

Length: 1482 bp
ATGGGGGCGCCGAGACGGCCGGAATCGCCGGGAATCGGCAAAAGAGGCGCTCCTCCGTGGCGGTGGCACGTCACATGGTGGCGGAATCGCCGGAAATCGGAGGGAGGAAGGAGGAGGCCGAACCGGAGAGGGAGAGATCGGGGGAGAGGAGAGAGAAAGAGCTGGGATCCTTCCTCGAATTTTAACCCGAACAAAAAAATTACCTTGCTTCGGACCCAAACCCCAAATCGCTTGCTTGCAAATTGCAATTACTGTTGTCGACCGATACCAAACCGAGATTTTCGTACACCAATTCCAATTCATACACAACAATTGTTGCAACGAGAGGTGGGTATCATTTTAATCACTTTTGAAAAGCATGCAAGTATTTTTGACTTGGATCATATGGTTTTCCCTGTGAGAAGAATTGTACTGTTGAAATCCGACCTTATTAAATTTTTTTGTGAGACCCTTGTTGACAGCCAAGAGGAGTTCCATCAAACCTTTTCAAATCAAAGAAATTTCATTAGATCCATTATCTCAATTGGAGAGGTGTTGCAGCACAAGGCTTCATCCACTTCTGATCATTACATTCAGGTTGTTCGCATGGTTGTGGGCAAGACAGCTGCTGGACCCCTATACAGTCACTTGATTCCTCTTGTTTTTCTTCTAGTTGATGGTGCCAGTCCAATTGATGTTTTGGATCCAAGTTGGGAGTTGTATCTCCTGGTCGAGAAGAAAACAGATGAGCAAGGGGACATCTACAATATATTGCTCGGCTTTACAGCTCTGTATCGTTTTTATTATTATCCTGATAGTTCTCGGTTGCGACTTAGCCAGATCTTGGTATTGCCTCCTTACCAGCATAAGGGTTATGGACGGTACATTCTTGAGGTTCTCAATCATGTTGCAGTATCTGAAGACATCTATGACTTCACAGTAGAAGAACCATTGGACTACTTCCAACGTGTACGCACTTGTGTTGATGTACTACGCCTTCAGAAATTAGATTCTGTTCGCAGTGCAGTCAATTTGGCTGTTTCAAATCTGACACAAGGAAAACTGTCAAAGAAAACGAGCATCCCTCGACTGATGCCAGCCACAAGAGTCATTGAGGATGTGAGGAAAAGCTTGAAAATTAACAAGAAACAATTTCTTCAATGTTGGGAGGTTTTCATCTATCTTGGCCTTGATCCAGTGGACGAGTACATGGAAGATTTTGTGAGTATTGTTTCTAATCGCATGAAGGAAGATCTCATAGGAAAAGAATCTGGGACTGGTGGGAAGCAAGTAATTGAAGTTCCAAGCGAAAACCCACTTGACATGTCATTTGTTATGTCCAAGTCCAATGCTGGTGAAGCTACTAGTACTGTTCAGGTAGATGAAAATCAACCAAATCAGGAGGAGCAACTCCAGCAGTTAGTTGATGAGAGAGTGAATGAGATCAAATCAATAGCAGAGAAACTATCTCGGCATCGCCAAAGCATTGTCGAGTCATCTTAA

Protein Analysis

493

Amino Acids

56.9

Weight (kDa)

9.16

Isoelectric Point (pI)

52.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 7, 659
AccB7I CCANNNNNTGG 1 cut(s) 823
AccI GTMKAC 1 cut(s) 259
AciI CCGC 2 cut(s) 61, 82
AclWI GGATC 7 cut(s) 161, 174, 387, 504, 677, 690, 1166
AcoI YGGCCR 1 cut(s) 17
AcsI RAATTY 3 cut(s) 178, 434, 499
AcuI CTGAAG 2 cut(s) 918, 962
AcyI GRCGYC 1 cut(s) 8
AdeI CACNNNGTG 1 cut(s) 78
AfaI GTAC 7 cut(s) 286, 411, 863, 951, 969, 1187, 1348
AfiI CCNNNNNNNGG 5 cut(s) 35, 97, 210, 823, 847
AflIII ACRYGT 2 cut(s) 946, 1302
AgsI TTSAA 7 cut(s) 353, 418, 489, 1023, 1114, 1139, 1277
AhlI ACTAGT 1 cut(s) 1343
AjiI CACGTC 1 cut(s) 70
AjnI CCWGG 1 cut(s) 705
AluBI AGCT 5 cut(s) 162, 605, 767, 1110, 1340
AluI AGCT 5 cut(s) 162, 605, 767, 1110, 1340
Alw26I GTCTC 2 cut(s) 7, 440
AlwI GGATC 7 cut(s) 161, 174, 387, 504, 677, 690, 1166
AlwNI CAGNNNCTG 2 cut(s) 608, 896
AoxI GGCC 3 cut(s) 17, 116, 1165
ApeKI GCWGC 2 cut(s) 538, 605
ApoI RAATTY 3 cut(s) 178, 434, 499
ArsI GACNNNNNNTTYG 2 cut(s) 1292, 1324
AspLEI GCGC 2 cut(s) 10, 50
AspS9I GGNCC 2 cut(s) 213, 611
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 1 cut(s) 1346
AvaII GGWCC 2 cut(s) 213, 611
BamHI GGATCC 2 cut(s) 166, 682
BanI GGYRCC 2 cut(s) 7, 659
BarI GAAGNNNNNNTAC 2 cut(s) 960, 992
BbsI GAAGAC 1 cut(s) 906
BbvI GCAGC 2 cut(s) 550, 592
BccI CCATC 2 cut(s) 483, 650
BceAI ACGGC 1 cut(s) 32
BciT130I CCWGG 1 cut(s) 707
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 2 cut(s) 7, 440
BcuI ACTAGT 1 cut(s) 1343
BfaI CTAG 2 cut(s) 650, 1344
BfoI RGCGCY 2 cut(s) 11, 51
BglI GCCNNNNNGGC 1 cut(s) 16
BglII AGATCT 2 cut(s) 819, 1231
BisI GCNGC 2 cut(s) 539, 606
BlsI GCNGC 2 cut(s) 540, 607
BmcAI AGTACT 1 cut(s) 1348
Bme1390I CCNGG 2 cut(s) 30, 707
Bme18I GGWCC 2 cut(s) 213, 611
BmgBI CACGTC 1 cut(s) 70
BmgT120I GGNCC 2 cut(s) 213, 611
BmiI GGNNCC 6 cut(s) 9, 168, 215, 613, 661, 684
BmrFI CCNGG 2 cut(s) 30, 707
BmsI GCATC 3 cut(s) 1062, 1068, 1462
BpiI GAAGAC 1 cut(s) 906
BplI GAGNNNNNCTC 2 cut(s) 1048, 1080
BpmI CTGGAG 1 cut(s) 1376
BpuEI CTTGAG 1 cut(s) 890
BpuMI CCSGG 1 cut(s) 30
BsaBI GATNNNNATC 1 cut(s) 1365
BsaHI GRCGYC 1 cut(s) 8
BsaI GGTCTC 1 cut(s) 440
BsaJI CCNNGG 1 cut(s) 56
BsaWI WCCGGW 1 cut(s) 123
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 97, 210, 823, 847
Bse1I ACTGG 3 cut(s) 663, 1175, 1261
Bse8I GATNNNNATC 1 cut(s) 1365
BseBI CCWGG 1 cut(s) 707
BseDI CCNNGG 1 cut(s) 56
BseGI GGATG 3 cut(s) 551, 1059, 1102
BseJI GATNNNNATC 1 cut(s) 1365
BseLI CCNNNNNNNGG 5 cut(s) 35, 97, 210, 823, 847
BseNI ACTGG 3 cut(s) 663, 1175, 1261
BseRI GAGGAG 5 cut(s) 42, 127, 162, 482, 1397
BseX3I CGGCCG 1 cut(s) 17
BseXI GCAGC 2 cut(s) 550, 592
BseYI CCCAGC 1 cut(s) 162
BsgI GTGCAG 1 cut(s) 1023
Bsh1285I CGRYCG 2 cut(s) 20, 263
BshFI GGCC 3 cut(s) 19, 118, 1167
BshNI GGYRCC 2 cut(s) 7, 659
BsiEI CGRYCG 2 cut(s) 20, 263
BsiSI CCGG 4 cut(s) 20, 29, 91, 124
BslFI GGGAC 2 cut(s) 749, 1267
BslI CCNNNNNNNGG 5 cut(s) 35, 97, 210, 823, 847
BsmAI GTCTC 2 cut(s) 7, 440
BsmBI CGTCTC 1 cut(s) 7
BsmFI GGGAC 2 cut(s) 749, 1267
BsnI GGCC 3 cut(s) 19, 118, 1167
Bso31I GGTCTC 1 cut(s) 440
BspACI CCGC 2 cut(s) 61, 82
BspANI GGCC 3 cut(s) 19, 118, 1167
BspLI GGNNCC 6 cut(s) 9, 168, 215, 613, 661, 684
BspPI GGATC 7 cut(s) 161, 174, 387, 504, 677, 690, 1166
BspT107I GGYRCC 2 cut(s) 7, 659
BspTNI GGTCTC 1 cut(s) 440
BsrI ACTGG 3 cut(s) 663, 1175, 1261
BssECI CCNNGG 1 cut(s) 56
BssNI GRCGYC 1 cut(s) 8
Bst2UI CCWGG 1 cut(s) 707
Bst4CI ACNGT 7 cut(s) 254, 414, 623, 861, 919, 1044, 1351
BstACI GRCGYC 1 cut(s) 8
BstC8I GCNNGC 4 cut(s) 233, 237, 360, 1077
BstDEI CTNAG 1 cut(s) 812
BstDSI CCRYGG 1 cut(s) 56
BstF5I GGATG 3 cut(s) 551, 1059, 1102
BstH2I RGCGCY 2 cut(s) 11, 51
BstHHI GCGC 2 cut(s) 10, 50
BstMAI GTCTC 2 cut(s) 7, 440
BstMCI CGRYCG 2 cut(s) 20, 263
BstMWI GCNNNNNNNGC 5 cut(s) 16, 25, 45, 1337, 1393
BstNI CCWGG 1 cut(s) 707
BstNSI RCATGY 2 cut(s) 362, 1306
BstSCI CCNGG 2 cut(s) 28, 705
BstV1I GCAGC 2 cut(s) 550, 592
BstV2I GAAGAC 1 cut(s) 906
BstX2I RGATCY 5 cut(s) 166, 509, 682, 819, 1231
BstYI RGATCY 5 cut(s) 166, 509, 682, 819, 1231
BstZI CGGCCG 1 cut(s) 17
BsuRI GGCC 3 cut(s) 19, 118, 1167
BtgI CCRYGG 1 cut(s) 56
BtgZI GCGATG 1 cut(s) 1439
BtrI CACGTC 1 cut(s) 70
BtsCI GGATG 3 cut(s) 551, 1059, 1102
BtsI GCAGTG 1 cut(s) 1006
BtsIMutI CAGTG 2 cut(s) 1006, 1182
Cac8I GCNNGC 4 cut(s) 233, 237, 360, 1077
CaiI CAGNNNCTG 2 cut(s) 608, 896
CfoI GCGC 2 cut(s) 10, 50
Cfr13I GGNCC 2 cut(s) 213, 611
Csp6I GTAC 7 cut(s) 285, 410, 862, 950, 968, 1186, 1347
CviAII CATG 7 cut(s) 75, 359, 586, 884, 1189, 1222, 1303
CviQI GTAC 7 cut(s) 285, 410, 862, 950, 968, 1186, 1347
DdeI CTNAG 1 cut(s) 812
DinI GGCGCC 1 cut(s) 9
DraIII CACNNNGTG 1 cut(s) 78
EaeI YGGCCR 1 cut(s) 17
EagI CGGCCG 1 cut(s) 17
EciI GGCGGA 1 cut(s) 97
EclXI CGGCCG 1 cut(s) 17
Eco31I GGTCTC 1 cut(s) 440
Eco47I GGWCC 2 cut(s) 213, 611
Eco52I CGGCCG 1 cut(s) 17
Eco57I CTGAAG 2 cut(s) 918, 962
EcoRII CCWGG 1 cut(s) 705
EgeI GGCGCC 1 cut(s) 9
EheI GGCGCC 1 cut(s) 9
Esp3I CGTCTC 1 cut(s) 7
FaeI CATG 7 cut(s) 78, 362, 589, 887, 1192, 1225, 1306
FaqI GGGAC 2 cut(s) 749, 1267
FatI CATG 7 cut(s) 74, 358, 585, 883, 1188, 1221, 1302
FauNDI CATATG 1 cut(s) 384
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 1 cut(s) 259
Fnu4HI GCNGC 2 cut(s) 539, 606
FokI GGATG 3 cut(s) 538, 1046, 1109
Fsp4HI GCNGC 2 cut(s) 539, 606
FspBI CTAG 2 cut(s) 650, 1344
GlaI GCGC 2 cut(s) 9, 49
GluI GCNGC 2 cut(s) 539, 606
GsaI CCCAGC 1 cut(s) 166
GsuI CTGGAG 1 cut(s) 1376
HaeII RGCGCY 2 cut(s) 11, 51
HaeIII GGCC 3 cut(s) 19, 118, 1167
HapII CCGG 4 cut(s) 20, 29, 91, 124
HhaI GCGC 2 cut(s) 10, 50
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 7 cut(s) 78, 362, 589, 887, 1192, 1225, 1306
Hin6I GCGC 2 cut(s) 8, 48
HinP1I GCGC 2 cut(s) 8, 48
HincII GTYRAC 2 cut(s) 260, 457
HindII GTYRAC 2 cut(s) 260, 457
HindIII AAGCTT 1 cut(s) 1108
HinfI GANTC 8 cut(s) 23, 33, 85, 631, 989, 1086, 1247, 1472
HpaII CCGG 4 cut(s) 20, 29, 91, 124
HphI GGTGA 1 cut(s) 1346
Hpy166II GTNNAC 5 cut(s) 260, 287, 457, 950, 1180
Hpy188I TCNGA 7 cut(s) 100, 213, 424, 562, 898, 981, 1029
Hpy188III TCNNGA 4 cut(s) 712, 791, 869, 1379
Hpy8I GTNNAC 5 cut(s) 260, 287, 457, 950, 1180
HpyAV CCTTC 4 cut(s) 102, 180, 986, 1219
HpyCH4III ACNGT 7 cut(s) 254, 414, 623, 861, 919, 1044, 1351
HpyCH4IV ACGT 2 cut(s) 69, 946
HpyCH4V TGCA 7 cut(s) 239, 246, 319, 362, 538, 890, 1004
HpyF10VI GCNNNNNNNGC 5 cut(s) 16, 25, 45, 1337, 1393
HpyF3I CTNAG 1 cut(s) 812
HpySE526I ACGT 2 cut(s) 69, 946
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 7 cut(s) 78, 362, 589, 887, 1192, 1225, 1306
HspAI GCGC 2 cut(s) 8, 48
KasI GGCGCC 1 cut(s) 7
Ksp22I TGATCA 1 cut(s) 562
LmnI GCTCC 2 cut(s) 55, 1384
Lsp1109I GCAGC 2 cut(s) 550, 592
LweI GCATC 3 cut(s) 1062, 1068, 1462
MaeI CTAG 2 cut(s) 650, 1344
MaeII ACGT 2 cut(s) 69, 946
MaeIII GTNAC 2 cut(s) 70, 623
MboII GAAGA 8 cut(s) 414, 638, 727, 911, 935, 1127, 1205, 1241
MfeI CAATTG 3 cut(s) 311, 522, 669
MflI RGATCY 5 cut(s) 166, 509, 682, 819, 1231
Mly113I GGCGCC 1 cut(s) 8
MlyI GAGTC 2 cut(s) 1095, 1481
MmeI TCCRAC 2 cut(s) 447, 967
MseI TTAA 5 cut(s) 183, 341, 432, 1119, 1480
MslI CAYNNNNRTG 1 cut(s) 590
MspA1I CMGCKG 1 cut(s) 605
MspI CCGG 4 cut(s) 20, 29, 91, 124
MspR9I CCNGG 2 cut(s) 30, 707
MunI CAATTG 3 cut(s) 311, 522, 669
MvaI CCWGG 1 cut(s) 707
MwoI GCNNNNNNNGC 5 cut(s) 16, 25, 45, 1337, 1393
NarI GGCGCC 1 cut(s) 8
NciI CCSGG 1 cut(s) 30
NdeI CATATG 1 cut(s) 384
NlaIII CATG 7 cut(s) 78, 362, 589, 887, 1192, 1225, 1306
NlaIV GGNNCC 6 cut(s) 9, 168, 215, 613, 661, 684
NmeAIII GCCGAG 3 cut(s) 36, 735, 1429
NmuCI GTSAC 2 cut(s) 70, 623
NspI RCATGY 2 cut(s) 362, 1306
PaeI GCATGC 1 cut(s) 362
PciI ACATGT 1 cut(s) 1302
PfeI GAWTC 6 cut(s) 23, 33, 85, 631, 989, 1247
PflMI CCANNNNNTGG 1 cut(s) 823
PkrI GCNGC 2 cut(s) 540, 607
PleI GAGTC 2 cut(s) 1094, 1480
PluTI GGCGCC 1 cut(s) 11
PpsI GAGTC 2 cut(s) 1094, 1480
PscI ACATGT 1 cut(s) 1302
Psp6I CCWGG 1 cut(s) 705
PspFI CCCAGC 1 cut(s) 162
PspGI CCWGG 1 cut(s) 705
PspN4I GGNNCC 6 cut(s) 9, 168, 215, 613, 661, 684
PspPI GGNCC 2 cut(s) 213, 611
PsrI GAACNNNNNNTAC 2 cut(s) 1263, 1295
PstNI CAGNNNCTG 2 cut(s) 608, 896
PsuI RGATCY 5 cut(s) 166, 509, 682, 819, 1231
PvuII CAGCTG 1 cut(s) 605
RsaI GTAC 7 cut(s) 286, 411, 863, 951, 969, 1187, 1348
RsaNI GTAC 7 cut(s) 285, 410, 862, 950, 968, 1186, 1347
RseI CAYNNNNRTG 1 cut(s) 590
SalI GTCGAC 1 cut(s) 258
SaqAI TTAA 5 cut(s) 183, 341, 432, 1119, 1480
SatI GCNGC 2 cut(s) 539, 606
Sau96I GGNCC 2 cut(s) 213, 611
ScaI AGTACT 1 cut(s) 1348
SchI GAGTC 2 cut(s) 1095, 1481
ScrFI CCNGG 2 cut(s) 30, 707
SfaNI GCATC 3 cut(s) 1062, 1068, 1462
SfoI GGCGCC 1 cut(s) 9
SinI GGWCC 2 cut(s) 213, 611
SmiMI CAYNNNNRTG 1 cut(s) 590
SmlI CTYRAG 1 cut(s) 869
SmoI CTYRAG 1 cut(s) 869
SpeI ACTAGT 1 cut(s) 1343
SphI GCATGC 1 cut(s) 362
SsiI CCGC 2 cut(s) 61, 82
SspDI GGCGCC 1 cut(s) 7
SspMI CTAG 2 cut(s) 650, 1344
StyD4I CCNGG 2 cut(s) 28, 705
TaaI ACNGT 7 cut(s) 254, 414, 623, 861, 919, 1044, 1351
TaiI ACGT 2 cut(s) 72, 949
TaqI TCGA 5 cut(s) 176, 259, 711, 1066, 1470
TaqII GACCGA 1 cut(s) 277
TatI WGTACW 4 cut(s) 409, 967, 1185, 1346
TfiI GAWTC 6 cut(s) 23, 33, 85, 631, 989, 1247
Tru1I TTAA 5 cut(s) 183, 341, 432, 1119, 1480
Tru9I TTAA 5 cut(s) 183, 341, 432, 1119, 1480
TscAI CASTG 2 cut(s) 1006, 1182
TseFI GTSAC 2 cut(s) 70, 623
TseI GCWGC 2 cut(s) 538, 605
Tsp45I GTSAC 2 cut(s) 70, 623
TspDTI ATGAA 6 cut(s) 290, 493, 540, 1144, 1238, 1377
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 2 cut(s) 1006, 1182
Van91I CCANNNNNTGG 1 cut(s) 823
VpaK11BI GGWCC 2 cut(s) 213, 611
XapI RAATTY 3 cut(s) 178, 434, 499
XceI RCATGY 2 cut(s) 362, 1306
XmiI GTMKAC 1 cut(s) 259
XspI CTAG 2 cut(s) 650, 1344
ZrmI AGTACT 1 cut(s) 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.