Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0009346

Physical Location & Seq

Genomic Coordinates Reverse (-)

2208806 .. 2211891

Gene Structure 3086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0027700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGCACCATGTGCAAAAATTGGATATTCCCTTCATTGCTATGTACCGAAAAGAGGACTGCCTTAGCTTACTGAAAGATCCTGAACAGCCTGAAGAAGAAAAATCTACGTTAAAGTGGCACAAGGTACTGTGGGCCATTCAGGAATTGCACAAAAAGTGGCTGCTGTTTCAGAATCAGAAAAGGGCATTGCAATTTCACTACAATAAGCGCTTTGAGGAAGAATCTCGACGAGGACTCTTACATGATGAGACTCCACAGCTTTTTGAATCAATTATGAAGTCACTCCGAGCTGCAGAGTCAGAGAGAGAGGTCGAGGATGTCAACAGCATGTTTAACTTGCATTTCCCTGCAGGTGAGGGTCAGGCTGCTATTGATATCAGTAGTGATCCAGGTGTGAGGAAGTATGTCCGCAGCAATTACTTTGATTTCGTTGAAGTATCAGTCACGAGCACAAAACCTGGCTTAAATATGGATTGTCAAAAAAAGCCATTGAATAGATTTGAGGATGCACAATGGTTGCTTGTCCAAAAGGCTGAAGAGGAGAATCTTGTACTAGTTACTATTAAGCTGCCCGAAGACCGTCTGAATAAGTTGATAAGCGACTTAAGCAACTACAATCTTAGTAAATCTGCACAACTGTGGAACGAGCAGCGCAAGTTGATATTGCAAGACGCTCTTTCCAATTTCCTTCTGCCTTCAATGGAGAAAGAAGCAAGATCCTTGTTGGTCAGTAGAGCAAAAAACTGTTTACTTATGCAATGTGGAAAGGCTTTGTGGAATAGAGTCTCCATGGCACCGCCATATAAACGGAACCAAACTGCACCACCTAGGGTCATGGCTTGCTGTTGGGGTCCCGGGGACCCTGCAACCACTTTAGTGATGTTGGATTCATGTGGGGAGCTGCTAGATGTGCTTTGCATAGGGACTATCAGCTGGGAGAATCTCACCTGGACCGTACCATTCTTTGATAAACCTACTAGACTGCGTATGGAAAATGATGATAAACGTATTCTGAAGTTCATGAATGATCACGAACCTGATCTTGCTATCATAGGAGCGACTAATATGTCTTGTGATATGCTGAAATTACAACTTCTGGGAATTGAATCATTACAGGTACCCGAGAAAATGATCCCCCTAAGGGTTGTATATGGGGATGAAACTTTGGCTTGCCTGTATGAAAATTCTCAGATTTCGGCTGATCAGCTACCTGGACAATCAGGCATGGTCAGGCGGGCTGTGGCTCTTGGGCGTTATCTTCAAAATCCACTGGCAATGGTTGCCACACTTTGTGGACCGGGACGAGAGATCTTATCTTGGAAACCACTCACTTCTCCTTTCGATAACTTTCTCACCCCAGATGAGAAGTACGCGATGATTGAACAGGTCATGGTAGATGTTACAAACCAGGTTGGCCTTGACATAACTTTGGCTACAAGCCATGAATGGTTATTTGCACCTTTGCAATTCATTTCTGGACTTGGACCTAGAAAGGCAGCATCTCTGCAGCGGTCATTGGTAAGAAGTGGTGAAATACTTGCTCGAAGGGAGTTGGCTACGTTGCATGGGCTTGGTAGAAGGGTGTATCTAAATGCAGTTGGTTTCTTGCGTATTCAGCAACATGGGTTAGCTGCTAGCAGCACCAGCAGCCAATTTAATGCTCTGTTGGATGATACAAGAATCCATCCAGAATCCTATTTGCTTGCACAAGAAATGGCCAAAGACGTTTATGATGATAAGGATGCAATGGAGCTGCAGCGCATTAGGGATCAACCTAGTTACCTCGAGAAGCTTGACGTTGAAGCATATGCTAAAAGCAAAAAACTTGAGAATAAGATGCAAACATTGTGCGGCATAAGGAGAGAATTAATACAGGGGTTTCAGGATGAGCGTAAAACATATGAAGAACTAGATGAAGATGACATGTTCTATACAATGACAGGTGAGACTTGCACCACACTATCTCAAGGAAGCATTGTGCAGGCCATAGTTCGAAGGGCTCTACCCAAAACAACAATTTGTACTGTGGGAGCTGGATTGATTTGTACACTTAAGAGAGAAGATTTTACAGTTAATGGGTGGGAAATTTCAGACTTATCTCAGGTACTGAAGGTGGGTGACATTATCACTTGCAAAATCAAACGCCTTCGAAAGAAGCGATTGAATGCGGAACTTTGTAGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010485 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031974 GO:0031981 GO:0034212 GO:0036211 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0051276 GO:0061733 GO:0070013 GO:0071704 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko05034 map05034

Pfam Domains

Protein Families

Acetyltransf_1 Hat1_N

Protein Analysis

728

Amino Acids

83.03

Weight (kDa)

6.26

Isoelectric Point (pI)

50.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
YqgF	PF14639	277 - 431	8.6e-13	Holliday-junction resolvase-like of SPT6
HHH_7	PF14635	445 - 538	1.8e-17	Helix-hairpin-helix motif
HHH_9	PF17674	556 - 631	1.9e-07	HHH domain
Spt6_S1	PF21710	642 - 725	4.4e-07	Spt6, S1/OB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009346)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56740 AT5G56740
fragaria_vesca	FvH4_1g06810
malus_domestica	MD02G1072700.v1.1 MD15G1202500.v1.1
prunus_persica	Prupe.7G214700_v2.0.a1
pyrus_communis	pycom02g05690 pycom15g17990
rosa_chinensis	RchiOBHm_Chr2g0092581
rosa_laevigata	RLG00000016325
rosa_multiflora	Rmu_sc0018576.1_g000001 Rmu_sc0019023.1_g000002
rosa_roxburghii	Rroxscaffold_2G00147670 Rroxscaffold_2G00147690 Rroxscaffold_2G00148950
rosa_rugosa	Rorug02G0027700
rosa_samantha	Rh2AG073600 Rh2AG087300 Rh2BG074500 Rh2CG075600 Rh2DG072700
rosa_wichuraiana	Rw2G005930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	341
AasI	GACNNNNNNGTC	1 cut(s)	1066
Acc36I	ACCTGC	1 cut(s)	341
Acc65I	GGTACC	1 cut(s)	1117
AccB1I	GGYRCC	2 cut(s)	793, 1117
AccII	CGCG	1 cut(s)	1373
AciI	CCGC	6 cut(s)	409, 797, 1234, 1510, 1851, 2168
AclWI	GGATC	5 cut(s)	71, 380, 711, 1126, 1776
AcoI	YGGCCR	1 cut(s)	1716
AcsI	RAATTY	2 cut(s)	1183, 2085
AcuI	CTGAAG	4 cut(s)	111, 555, 1034, 2129
AdeI	CACNNNGTG	2 cut(s)	10, 1292
AfaI	GTAC	9 cut(s)	44, 126, 552, 957, 1119, 1370, 2023, 2047, 2106
AfeI	AGCGCT	1 cut(s)	209
AfiI	CCNNNNNNNGG	2 cut(s)	52, 1141
AflII	CTTAAG	2 cut(s)	604, 2051
AflIII	ACRYGT	1 cut(s)	1923
AgsI	TTSAA	9 cut(s)	266, 434, 493, 699, 1106, 1262, 1382, 1802, 2164
AhlI	ACTAGT	1 cut(s)	553
AjnI	CCWGG	5 cut(s)	388, 457, 947, 1210, 1407
AleI	CACNNNNGTG	2 cut(s)	637, 875
Alw21I	GWGCWC	1 cut(s)	452
Alw26I	GTCTC	3 cut(s)	242, 790, 1940
AlwI	GGATC	5 cut(s)	71, 380, 711, 1126, 1776
AlwNI	CAGNNNCTG	1 cut(s)	2107
Ama87I	CYCGRG	3 cut(s)	854, 1121, 1784
Aor51HI	AGCGCT	1 cut(s)	209
AoxI	GGCC	4 cut(s)	132, 1414, 1716, 1983
ApoI	RAATTY	2 cut(s)	1183, 2085
AseI	ATTAAT	1 cut(s)	1868
Asp718I	GGTACC	1 cut(s)	1117
AspA2I	CCTAGG	1 cut(s)	827
AspLEI	GCGC	3 cut(s)	210, 654, 1761
AspS9I	GGNCC	6 cut(s)	132, 851, 859, 951, 1295, 1484
AsuC2I	CCSGG	3 cut(s)	855, 856, 1299
AsuHPI	GGTGA	6 cut(s)	365, 937, 1345, 1541, 1955, 2129
AsuII	TTCGAA	2 cut(s)	1993, 2149
AsuNHI	GCTAGC	1 cut(s)	1634
AvaI	CYCGRG	3 cut(s)	854, 1121, 1784
AvaII	GGWCC	5 cut(s)	851, 859, 951, 1295, 1484
AvrII	CCTAGG	1 cut(s)	827
AxyI	CCTNAGG	1 cut(s)	1139
BalI	TGGCCA	1 cut(s)	1718
BanI	GGYRCC	2 cut(s)	793, 1117
BanII	GRGCYC	1 cut(s)	2002
BauI	CACGAG	1 cut(s)	445
BbsI	GAAGAC	1 cut(s)	582
Bbv12I	GWGCWC	1 cut(s)	452
BccI	CCATC	1 cut(s)	1692
BciT130I	CCWGG	5 cut(s)	390, 459, 949, 1212, 1409
BclI	TGATCA	2 cut(s)	1027, 1201
BcnI	CCSGG	3 cut(s)	855, 856, 1299
BcoDI	GTCTC	3 cut(s)	242, 790, 1940
BcuI	ACTAGT	1 cut(s)	553
BfaI	CTAG	8 cut(s)	554, 828, 905, 978, 1488, 1635, 1776, 1910
BfmI	CTRYAG	4 cut(s)	291, 348, 1505, 1754
BfoI	RGCGCY	1 cut(s)	211
BfrI	CTTAAG	2 cut(s)	604, 2051
BfuAI	ACCTGC	1 cut(s)	341
BglII	AGATCT	1 cut(s)	1308
BlnI	CCTAGG	1 cut(s)	827
Bme1390I	CCNGG	8 cut(s)	390, 459, 855, 856, 949, 1212, 1299, 1409
Bme18I	GGWCC	5 cut(s)	851, 859, 951, 1295, 1484
BmeT110I	CYCGRG	3 cut(s)	854, 1121, 1784
BmgT120I	GGNCC	6 cut(s)	132, 851, 859, 951, 1295, 1484
BmiI	GGNNCC	7 cut(s)	795, 812, 852, 853, 860, 861, 1119
BmrFI	CCNGG	8 cut(s)	390, 459, 855, 856, 949, 1212, 1299, 1409
BmsI	GCATC	4 cut(s)	496, 1508, 1732, 1827
BmtI	GCTAGC	1 cut(s)	1638
BpiI	GAAGAC	1 cut(s)	582
Bpu10I	CCTNAGC	1 cut(s)	62
Bpu14I	TTCGAA	2 cut(s)	1993, 2149
BpuEI	CTTGAG	2 cut(s)	1847, 1950
BpuMI	CCSGG	3 cut(s)	855, 856, 1299
BsaJI	CCNNGG	4 cut(s)	789, 827, 854, 855
Bsc4I	CCNNNNNNNGG	2 cut(s)	52, 1141
Bse1I	ACTGG	1 cut(s)	1275
Bse21I	CCTNAGG	1 cut(s)	1139
Bse3DI	GCAATG	5 cut(s)	33, 185, 764, 1281, 1752
BseBI	CCWGG	5 cut(s)	390, 459, 949, 1212, 1409
BseDI	CCNNGG	4 cut(s)	789, 827, 854, 855
BseGI	GGATG	7 cut(s)	322, 511, 1162, 1675, 1684, 1747, 1891
BseLI	CCNNNNNNNGG	2 cut(s)	52, 1141
BseMI	GCAATG	5 cut(s)	33, 185, 764, 1281, 1752
BseMII	CTCAG	2 cut(s)	1202, 2114
BseNI	ACTGG	1 cut(s)	1275
BseRI	GAGGAG	1 cut(s)	554
BseYI	CCCAGC	1 cut(s)	933
BsgI	GTGCAG	3 cut(s)	615, 804, 2000
Bsh1236I	CGCG	1 cut(s)	1373
BshFI	GGCC	4 cut(s)	134, 1416, 1718, 1985
BshNI	GGYRCC	2 cut(s)	793, 1117
BsiHKAI	GWGCWC	1 cut(s)	452
BsiHKCI	CYCGRG	3 cut(s)	854, 1121, 1784
BsiSI	CCGG	2 cut(s)	855, 1298
BslFI	GGGAC	4 cut(s)	837, 872, 937, 1314
BslI	CCNNNNNNNGG	2 cut(s)	52, 1141
BsmAI	GTCTC	3 cut(s)	242, 790, 1940
BsmFI	GGGAC	4 cut(s)	837, 872, 937, 1314
BsmI	GAATGC	1 cut(s)	2170
BsnI	GGCC	4 cut(s)	134, 1416, 1718, 1985
BsoBI	CYCGRG	3 cut(s)	854, 1121, 1784
Bsp119I	TTCGAA	2 cut(s)	1993, 2149
Bsp1286I	GDGCHC	2 cut(s)	452, 2002
Bsp1407I	TGTACA	1 cut(s)	2045
Bsp143I	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
Bsp19I	CCATGG	1 cut(s)	789
BspACI	CCGC	6 cut(s)	409, 797, 1234, 1510, 1851, 2168
BspANI	GGCC	4 cut(s)	134, 1416, 1718, 1985
BspCNI	CTCAG	2 cut(s)	1201, 2113
BspFNI	CGCG	1 cut(s)	1373
BspHI	TCATGA	1 cut(s)	1020
BspLI	GGNNCC	7 cut(s)	795, 812, 852, 853, 860, 861, 1119
BspMAI	CTGCAG	4 cut(s)	295, 352, 1509, 1758
BspMI	ACCTGC	1 cut(s)	341
BspOI	GCTAGC	1 cut(s)	1638
BspPI	GGATC	5 cut(s)	71, 380, 711, 1126, 1776
BspT104I	TTCGAA	2 cut(s)	1993, 2149
BspT107I	GGYRCC	2 cut(s)	793, 1117
BspTI	CTTAAG	2 cut(s)	604, 2051
BsrDI	GCAATG	5 cut(s)	33, 185, 764, 1281, 1752
BsrGI	TGTACA	1 cut(s)	2045
BsrI	ACTGG	1 cut(s)	1275
BssECI	CCNNGG	4 cut(s)	789, 827, 854, 855
BssMI	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
BssSI	CACGAG	1 cut(s)	445
BssT1I	CCWWGG	2 cut(s)	789, 827
Bst2BI	CACGAG	1 cut(s)	445
Bst2UI	CCWGG	5 cut(s)	390, 459, 949, 1212, 1409
Bst4CI	ACNGT	7 cut(s)	129, 581, 639, 746, 955, 2026, 2071
Bst6I	CTCTTC	1 cut(s)	531
BstAFI	CTTAAG	2 cut(s)	604, 2051
BstAPI	GCANNNNNTGC	2 cut(s)	10, 1280
BstAUI	TGTACA	1 cut(s)	2045
BstBI	TTCGAA	2 cut(s)	1993, 2149
BstC8I	GCNNGC	6 cut(s)	841, 1171, 1236, 1636, 1704, 1983
BstDEI	CTNAG	5 cut(s)	62, 620, 1139, 1188, 2100
BstDSI	CCRYGG	1 cut(s)	789
BstF5I	GGATG	7 cut(s)	322, 511, 1162, 1675, 1684, 1747, 1891
BstFNI	CGCG	1 cut(s)	1373
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	3 cut(s)	210, 654, 1761
BstKTI	GATC	9 cut(s)	79, 388, 719, 1030, 1042, 1134, 1204, 1311, 1771
BstMAI	GTCTC	3 cut(s)	242, 790, 1940
BstMBI	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
BstMWI	GCNNNNNNNGC	7 cut(s)	10, 606, 910, 1280, 1615, 1644, 1647
BstNI	CCWGG	5 cut(s)	390, 459, 949, 1212, 1409
BstNSI	RCATGY	2 cut(s)	331, 1927
BstSCI	CCNGG	8 cut(s)	388, 457, 853, 854, 947, 1210, 1297, 1407
BstSFI	CTRYAG	4 cut(s)	291, 348, 1505, 1754
BstUI	CGCG	1 cut(s)	1373
BstV2I	GAAGAC	1 cut(s)	582
BstX2I	RGATCY	3 cut(s)	76, 716, 1308
BstYI	RGATCY	3 cut(s)	76, 716, 1308
Bsu36I	CCTNAGG	1 cut(s)	1139
BsuRI	GGCC	4 cut(s)	134, 1416, 1718, 1985
BtgI	CCRYGG	1 cut(s)	789
BtgZI	GCGATG	1 cut(s)	1388
BtsCI	GGATG	7 cut(s)	322, 511, 1162, 1675, 1684, 1747, 1891
BtsIMutI	CAGTG	1 cut(s)	1268
BveI	ACCTGC	1 cut(s)	341
Cac8I	GCNNGC	6 cut(s)	841, 1171, 1236, 1636, 1704, 1983
CaiI	CAGNNNCTG	1 cut(s)	2107
CciI	TCATGA	1 cut(s)	1020
CfoI	GCGC	3 cut(s)	210, 654, 1761
Cfr13I	GGNCC	6 cut(s)	132, 851, 859, 951, 1295, 1484
Cfr9I	CCCGGG	1 cut(s)	854
CseI	GACGC	1 cut(s)	680
CsiI	ACCWGGT	1 cut(s)	1407
Csp6I	GTAC	9 cut(s)	43, 125, 551, 956, 1118, 1369, 2022, 2046, 2105
CviQI	GTAC	9 cut(s)	43, 125, 551, 956, 1118, 1369, 2022, 2046, 2105
DdeI	CTNAG	5 cut(s)	62, 620, 1139, 1188, 2100
DpnI	GATC	9 cut(s)	78, 387, 718, 1029, 1041, 1133, 1203, 1310, 1770
DpnII	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
DraIII	CACNNNGTG	2 cut(s)	10, 1292
DrdI	GACNNNNNNGTC	1 cut(s)	1066
DseDI	GACNNNNNNGTC	1 cut(s)	1066
EaeI	YGGCCR	1 cut(s)	1716
Eam1104I	CTCTTC	1 cut(s)	531
EarI	CTCTTC	1 cut(s)	531
Eco130I	CCWWGG	2 cut(s)	789, 827
Eco24I	GRGCYC	1 cut(s)	2002
Eco32I	GATATC	1 cut(s)	376
Eco47I	GGWCC	5 cut(s)	851, 859, 951, 1295, 1484
Eco47III	AGCGCT	1 cut(s)	209
Eco57I	CTGAAG	4 cut(s)	111, 555, 1034, 2129
Eco81I	CCTNAGG	1 cut(s)	1139
Eco88I	CYCGRG	3 cut(s)	854, 1121, 1784
EcoO109I	RGGNCCY	2 cut(s)	851, 859
EcoRII	CCWGG	5 cut(s)	388, 457, 947, 1210, 1407
EcoRV	GATATC	1 cut(s)	376
EcoT14I	CCWWGG	2 cut(s)	789, 827
EcoT38I	GRGCYC	1 cut(s)	2002
ErhI	CCWWGG	2 cut(s)	789, 827
FalI	AAGNNNNNCTT	2 cut(s)	660, 692
FaqI	GGGAC	4 cut(s)	837, 872, 937, 1314
FauI	CCCGC	1 cut(s)	1227
FauNDI	CATATG	2 cut(s)	1807, 1900
FbaI	TGATCA	2 cut(s)	1027, 1201
FokI	GGATG	7 cut(s)	329, 518, 1169, 1671, 1682, 1754, 1898
FriOI	GRGCYC	1 cut(s)	2002
FspBI	CTAG	8 cut(s)	554, 828, 905, 978, 1488, 1635, 1776, 1910
GlaI	GCGC	3 cut(s)	209, 653, 1760
GsaI	CCCAGC	1 cut(s)	937
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	4 cut(s)	134, 1416, 1718, 1985
HapII	CCGG	2 cut(s)	855, 1298
HgaI	GACGC	1 cut(s)	680
HhaI	GCGC	3 cut(s)	210, 654, 1761
Hin6I	GCGC	3 cut(s)	208, 652, 1759
HinP1I	GCGC	3 cut(s)	208, 652, 1759
HincII	GTYRAC	1 cut(s)	322
HindII	GTYRAC	1 cut(s)	322
HindIII	AAGCTT	1 cut(s)	1790
HpaII	CCGG	2 cut(s)	855, 1298
HphI	GGTGA	6 cut(s)	365, 937, 1345, 1541, 1955, 2129
Hpy166II	GTNNAC	4 cut(s)	322, 749, 1295, 2048
Hpy188I	TCNGA	8 cut(s)	171, 177, 287, 301, 585, 1014, 1191, 2092
Hpy8I	GTNNAC	4 cut(s)	322, 749, 1295, 2048
Hpy99I	CGWCG	1 cut(s)	231
HpyAV	CCTTC	8 cut(s)	40, 698, 705, 1539, 1572, 1989, 2104, 2156
HpyCH4III	ACNGT	7 cut(s)	129, 581, 639, 746, 955, 2026, 2071
HpyCH4IV	ACGT	5 cut(s)	107, 1006, 1559, 1725, 1797
HpyF10VI	GCNNNNNNNGC	7 cut(s)	10, 606, 910, 1280, 1615, 1644, 1647
HpyF3I	CTNAG	5 cut(s)	62, 620, 1139, 1188, 2100
HpySE526I	ACGT	5 cut(s)	107, 1006, 1559, 1725, 1797
HspAI	GCGC	3 cut(s)	208, 652, 1759
KflI	GGGWCCC	2 cut(s)	851, 859
KpnI	GGTACC	1 cut(s)	1121
Ksp22I	TGATCA	2 cut(s)	1027, 1201
Kzo9I	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
LmnI	GCTCC	4 cut(s)	898, 1055, 1750, 2030
LweI	GCATC	4 cut(s)	496, 1508, 1732, 1827
MabI	ACCWGGT	1 cut(s)	1407
MaeI	CTAG	8 cut(s)	554, 828, 905, 978, 1488, 1635, 1776, 1910
MaeII	ACGT	5 cut(s)	107, 1006, 1559, 1725, 1797
MaeIII	GTNAC	6 cut(s)	279, 442, 556, 1399, 1778, 2117
MalI	GATC	9 cut(s)	78, 387, 718, 1029, 1041, 1133, 1203, 1310, 1770
MboI	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
MboII	GAAGA	9 cut(s)	104, 107, 230, 548, 587, 1250, 1916, 1928, 2072
MflI	RGATCY	3 cut(s)	76, 716, 1308
MhlI	GDGCHC	2 cut(s)	452, 2002
MlsI	TGGCCA	1 cut(s)	1718
MluNI	TGGCCA	1 cut(s)	1718
MlyI	GAGTC	4 cut(s)	228, 244, 305, 792
MmeI	TCCRAC	2 cut(s)	864, 1647
Mox20I	TGGCCA	1 cut(s)	1718
MscI	TGGCCA	1 cut(s)	1718
MseI	TTAA	9 cut(s)	110, 333, 464, 564, 605, 1656, 1868, 2052, 2073
MslI	CAYNNNNRTG	3 cut(s)	38, 637, 875
Msp20I	TGGCCA	1 cut(s)	1718
MspA1I	CMGCKG	2 cut(s)	933, 1510
MspCI	CTTAAG	2 cut(s)	604, 2051
MspI	CCGG	2 cut(s)	855, 1298
MspR9I	CCNGG	8 cut(s)	390, 459, 855, 856, 949, 1212, 1299, 1409
Mva1269I	GAATGC	1 cut(s)	2170
MvaI	CCWGG	5 cut(s)	390, 459, 949, 1212, 1409
MvnI	CGCG	1 cut(s)	1373
MwoI	GCNNNNNNNGC	7 cut(s)	10, 606, 910, 1280, 1615, 1644, 1647
NciI	CCSGG	3 cut(s)	855, 856, 1299
NcoI	CCATGG	1 cut(s)	789
NdeI	CATATG	2 cut(s)	1807, 1900
NdeII	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
NheI	GCTAGC	1 cut(s)	1634
NlaIV	GGNNCC	7 cut(s)	795, 812, 852, 853, 860, 861, 1119
NmuCI	GTSAC	3 cut(s)	279, 442, 2117
NspI	RCATGY	2 cut(s)	331, 1927
NspV	TTCGAA	2 cut(s)	1993, 2149
OliI	CACNNNNGTG	2 cut(s)	637, 875
PaeR7I	CTCGAG	1 cut(s)	1784
PagI	TCATGA	1 cut(s)	1020
PaqCI	CACCTGC	1 cut(s)	341
PciI	ACATGT	1 cut(s)	1923
PcsI	WCGNNNNNNNCGW	1 cut(s)	2155
PctI	GAATGC	1 cut(s)	2170
PfeI	GAWTC	9 cut(s)	172, 221, 266, 544, 887, 940, 1106, 1680, 1691
PleI	GAGTC	4 cut(s)	228, 244, 304, 791
PpsI	GAGTC	4 cut(s)	228, 244, 304, 791
PpuMI	RGGWCCY	2 cut(s)	851, 859
PscI	ACATGT	1 cut(s)	1923
PshBI	ATTAAT	1 cut(s)	1868
Psp5II	RGGWCCY	2 cut(s)	851, 859
Psp6I	CCWGG	5 cut(s)	388, 457, 947, 1210, 1407
PspFI	CCCAGC	1 cut(s)	933
PspGI	CCWGG	5 cut(s)	388, 457, 947, 1210, 1407
PspN4I	GGNNCC	7 cut(s)	795, 812, 852, 853, 860, 861, 1119
PspPI	GGNCC	6 cut(s)	132, 851, 859, 951, 1295, 1484
PspPPI	RGGWCCY	2 cut(s)	851, 859
PstI	CTGCAG	4 cut(s)	295, 352, 1509, 1758
PstNI	CAGNNNCTG	1 cut(s)	2107
PsuI	RGATCY	3 cut(s)	76, 716, 1308
PvuII	CAGCTG	1 cut(s)	933
RsaI	GTAC	9 cut(s)	44, 126, 552, 957, 1119, 1370, 2023, 2047, 2106
RsaNI	GTAC	9 cut(s)	43, 125, 551, 956, 1118, 1369, 2022, 2046, 2105
RseI	CAYNNNNRTG	3 cut(s)	38, 637, 875
SaqAI	TTAA	9 cut(s)	110, 333, 464, 564, 605, 1656, 1868, 2052, 2073
Sau3AI	GATC	9 cut(s)	76, 385, 716, 1027, 1039, 1131, 1201, 1308, 1768
Sau96I	GGNCC	6 cut(s)	132, 851, 859, 951, 1295, 1484
SbfI	CCTGCAGG	1 cut(s)	352
SchI	GAGTC	4 cut(s)	228, 244, 305, 792
ScrFI	CCNGG	8 cut(s)	390, 459, 855, 856, 949, 1212, 1299, 1409
SdaI	CCTGCAGG	1 cut(s)	352
SduI	GDGCHC	2 cut(s)	452, 2002
SexAI	ACCWGGT	1 cut(s)	1407
SfaNI	GCATC	4 cut(s)	496, 1508, 1732, 1827
SfcI	CTRYAG	4 cut(s)	291, 348, 1505, 1754
Sfr274I	CTCGAG	1 cut(s)	1784
SfuI	TTCGAA	2 cut(s)	1993, 2149
SinI	GGWCC	5 cut(s)	851, 859, 951, 1295, 1484
SlaI	CTCGAG	1 cut(s)	1784
SmaI	CCCGGG	1 cut(s)	856
SmiMI	CAYNNNNRTG	3 cut(s)	38, 637, 875
SmlI	CTYRAG	5 cut(s)	604, 1784, 1826, 1965, 2051
SmoI	CTYRAG	5 cut(s)	604, 1784, 1826, 1965, 2051
SpeI	ACTAGT	1 cut(s)	553
Sse8387I	CCTGCAGG	1 cut(s)	352
SsiI	CCGC	6 cut(s)	409, 797, 1234, 1510, 1851, 2168
SspMI	CTAG	8 cut(s)	554, 828, 905, 978, 1488, 1635, 1776, 1910
StyD4I	CCNGG	8 cut(s)	388, 457, 853, 854, 947, 1210, 1297, 1407
StyI	CCWWGG	2 cut(s)	789, 827
TaaI	ACNGT	7 cut(s)	129, 581, 639, 746, 955, 2026, 2071
TaiI	ACGT	5 cut(s)	110, 1009, 1562, 1728, 1800
TaqI	TCGA	7 cut(s)	226, 312, 1341, 1543, 1785, 1993, 2149
TatI	WGTACW	3 cut(s)	550, 2021, 2045
TauI	GCSGC	1 cut(s)	1854
TfiI	GAWTC	9 cut(s)	172, 221, 266, 544, 887, 940, 1106, 1680, 1691
Tru1I	TTAA	9 cut(s)	110, 333, 464, 564, 605, 1656, 1868, 2052, 2073
Tru9I	TTAA	9 cut(s)	110, 333, 464, 564, 605, 1656, 1868, 2052, 2073
TscAI	CASTG	1 cut(s)	1275
TseFI	GTSAC	3 cut(s)	279, 442, 2117
Tsp45I	GTSAC	3 cut(s)	279, 442, 2117
TspGWI	ACGGA	1 cut(s)	823
TspMI	CCCGGG	1 cut(s)	854
TspRI	CASTG	1 cut(s)	1275
Vha464I	CTTAAG	2 cut(s)	604, 2051
VpaK11BI	GGWCC	5 cut(s)	851, 859, 951, 1295, 1484
VspI	ATTAAT	1 cut(s)	1868
XapI	RAATTY	2 cut(s)	1183, 2085
XceI	RCATGY	2 cut(s)	331, 1927
XhoI	CTCGAG	1 cut(s)	1784
XmaI	CCCGGG	1 cut(s)	854
XmaJI	CCTAGG	1 cut(s)	827
XspI	CTAG	8 cut(s)	554, 828, 905, 978, 1488, 1635, 1776, 1910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.