MD15G1202500.v1.1

Histone acetyltransferase type B catalytic

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
16122666 .. 16125915
3250 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1202500.v1.1.491

Sequence Viewer

Length: 1425 bp
ATGGTGCAGAAGCAAGGAGCCTCCGCCGATCCCACCGCCACCGAACCTAAGAAACGACGTCGCGTCGGCTTCTCCAGCGTCGATGCTGGACTGGAGGCCAAAGATTGCATCAAGATTTACCTAGTTTCTAGCAAAGAGGAAGTGGGTTCTACAGACAGTTTTTGTATTGAGCCTGTTGATTTGAATAGCTCTTTTGATGATGATGGGAAGATATATGGTTACAAAGGATTGAAGATTACGATATGGGTTAGCAGTTTATCCTTTCATGCGTATGCTGATATTGCATTTGAGAGCACAACTGATGGTGGAAAAGGGATCACCAATTTGAAAGCAGCTCTTCAGAGAATTTTTGCTGAGACCCTCGTTGAGAGTGAAGAGGAGTTCCTTCAAACTTTTTCAACGCAGAGAAATTTGATTAGATACATGGTCACAACCGGGGAGGTGTTACAGTGCAAGACCTCTAATGGACAAATAAGTTATTGTAATGGTCAGCTTGGAGCAACCACTTCTGATTTGCAGGTTGTTCGCTTGGTTGTGGGCAAGACAGCTGCTGGGAACCTTTACAGTCACTTGATTCCTCTTGTTCTTCTTCTTGTTGATGGTAGCAGTCCGATCGATGTTGTGGATCCAAGATGGGAGCTGTATGTCCTGATCCAGAACAAAATAGATGAGAAGGGGGACATCTACAATATATTGCTTGGTTTTACAGCTGTTTATCGTTTTTACCATTATCCTGATAGTTCTCGGTTGCGGCTCAGTCAGATATTGGTATTGCCTCCTTACCAACACAAGGGTTATGGACGATACCTTCTTGAGGCTCTCAATGATGTTGCAGTATCTGAAAACGTCCATGACCTCACAGTTGAAGAACCATTAGATTACTTCCAACATGTACGTACTTGTGTTGATGTACTACGCCTTCATAAGTTTGACCCAATCAAGGATGCGGTTAACTCAGCAGTTTCGCAACTGAAGCAAGGAAAGTTGTCGAAGAAGACACACACTCCTCGACTCATGCCAGCTACTAGTGTCATTGAGGATGCCCGGAAAAGTTTGAAAATTAACAAGAAACAGTTTCTTCAGTGCTGGGATGTTTTCCTTTATCTCGGCCTTGATCCTGTGGACAAGTACATGGAGGATTTTGTGGGAATTATTTCTAATCGCATGAAGGAAGATCTCATAGGAAAAGATTCTGGGGCGGGTGGGAAGCGAGTGGTTGAAGTTCCAAGCGAATATGAGCCGGAGATGTCATTTGTCATGTTCAGGTCACAGGCCGGTGAAGCTACTGGTACTGTTCAGATAGACGAAAATCAACCAAATCAGGAAGAGCAACTCCAGCAATTAGTTGAGGAGAGAGTGAAAGAGATCAAATCAGTAGCTGAGAGAGTGTCTTCGCAGATCTCCCTCGCTGCGGAGGCATCATAA

Protein Analysis

475

Amino Acids

52.97

Weight (kDa)

5.33

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hat1_N PF10394 31 - 200 4.8e-26 Histone acetyl transferase HAT1 N-terminus
Acetyltransf_1 PF00583 227 - 285 1e-05 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 61
Acc36I ACCTGC 1 cut(s) 508
AccII CGCG 1 cut(s) 63
AciI CCGC 6 cut(s) 24, 36, 751, 947, 1199, 1412
AclWI GGATC 6 cut(s) 23, 323, 620, 633, 646, 1109
AcsI RAATTY 2 cut(s) 345, 409
AcuI CTGAAG 3 cut(s) 323, 992, 1064
AcyI GRCGYC 1 cut(s) 58
AfaI GTAC 5 cut(s) 894, 898, 912, 1130, 1291
AfiI CCNNNNNNNGG 4 cut(s) 790, 814, 940, 1411
AflIII ACRYGT 1 cut(s) 889
AgsI TTSAA 8 cut(s) 184, 232, 328, 389, 399, 866, 1057, 1220
AhdI GACNNNNNGTC 1 cut(s) 62
AhlI ACTAGT 1 cut(s) 1025
AluBI AGCT 9 cut(s) 189, 335, 493, 548, 640, 710, 1022, 1283, 1379
AluI AGCT 9 cut(s) 189, 335, 493, 548, 640, 710, 1022, 1283, 1379
Alw21I GWGCWC 1 cut(s) 296
Alw26I GTCTC 1 cut(s) 350
AlwI GGATC 6 cut(s) 23, 323, 620, 633, 646, 1109
AlwNI CAGNNNCTG 3 cut(s) 551, 839, 1379
AoxI GGCC 3 cut(s) 96, 1108, 1272
ApeKI GCWGC 3 cut(s) 332, 548, 1409
ApoI RAATTY 2 cut(s) 345, 409
Asp700I GAANNNNTTC 2 cut(s) 1153, 1189
AsuC2I CCSGG 2 cut(s) 436, 1045
AsuHPI GGTGA 2 cut(s) 310, 1289
BamHI GGATCC 1 cut(s) 625
BarI GAAGNNNNNNTAC 2 cut(s) 903, 935
BbsI GAAGAC 2 cut(s) 1001, 1383
Bbv12I GWGCWC 1 cut(s) 296
BbvI GCAGC 3 cut(s) 344, 535, 1396
BccI CCATC 4 cut(s) 197, 296, 593, 627
BcgI CGANNNNNNTGC 4 cut(s) 506, 540, 595, 629
BcnI CCSGG 2 cut(s) 436, 1045
BcoDI GTCTC 1 cut(s) 350
BcuI ACTAGT 1 cut(s) 1025
BfaI CTAG 3 cut(s) 122, 129, 1026
BfmI CTRYAG 1 cut(s) 150
BfuAI ACCTGC 1 cut(s) 508
BglII AGATCT 2 cut(s) 1174, 1398
BisI GCNGC 4 cut(s) 333, 549, 752, 1410
BlsI GCNGC 4 cut(s) 334, 550, 753, 1411
Bme1390I CCNGG 2 cut(s) 436, 1045
BmeRI GACNNNNNGTC 1 cut(s) 62
BmiI GGNNCC 3 cut(s) 19, 557, 627
BmrFI CCNGG 2 cut(s) 436, 1045
BmsI GCATC 4 cut(s) 73, 117, 934, 1030
BpiI GAAGAC 2 cut(s) 1001, 1383
BpmI CTGGAG 3 cut(s) 58, 113, 1319
BpuEI CTTGAG 1 cut(s) 833
BpuMI CCSGG 2 cut(s) 436, 1045
Bsa29I ATCGAT 1 cut(s) 615
BsaAI YACGTR 1 cut(s) 896
BsaHI GRCGYC 1 cut(s) 58
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 1 cut(s) 435
BsaXI ACNNNNNCTCC 2 cut(s) 988, 1018
Bsc4I CCNNNNNNNGG 4 cut(s) 790, 814, 940, 1411
Bse118I RCCGGY 1 cut(s) 1274
Bse1I ACTGG 2 cut(s) 96, 1291
BseCI ATCGAT 1 cut(s) 615
BseDI CCNNGG 1 cut(s) 435
BseGI GGATG 3 cut(s) 949, 1045, 1096
BseLI CCNNNNNNNGG 4 cut(s) 790, 814, 940, 1411
BseMII CTCAG 4 cut(s) 345, 769, 969, 1371
BseNI ACTGG 2 cut(s) 96, 1291
BseRI GAGGAG 3 cut(s) 392, 996, 1364
BseXI GCAGC 3 cut(s) 344, 535, 1396
BseYI CCCAGC 2 cut(s) 551, 1086
BsgI GTGCAG 1 cut(s) 26
Bsh1236I CGCG 1 cut(s) 63
Bsh1285I CGRYCG 1 cut(s) 615
BshFI GGCC 3 cut(s) 98, 1110, 1274
BshVI ATCGAT 1 cut(s) 615
BsiEI CGRYCG 1 cut(s) 615
BsiHKAI GWGCWC 1 cut(s) 296
BsiSI CCGG 4 cut(s) 435, 1045, 1241, 1275
BslFI GGGAC 1 cut(s) 692
BslI CCNNNNNNNGG 4 cut(s) 790, 814, 940, 1411
BsmAI GTCTC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 692
BsnI GGCC 3 cut(s) 98, 1110, 1274
Bso31I GGTCTC 1 cut(s) 350
Bsp1286I GDGCHC 1 cut(s) 296
Bsp143I GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
BspACI CCGC 6 cut(s) 24, 36, 751, 947, 1199, 1412
BspANI GGCC 3 cut(s) 98, 1110, 1274
BspCNI CTCAG 4 cut(s) 346, 768, 968, 1372
BspDI ATCGAT 1 cut(s) 615
BspFNI CGCG 1 cut(s) 63
BspLI GGNNCC 3 cut(s) 19, 557, 627
BspMI ACCTGC 1 cut(s) 508
BspPI GGATC 6 cut(s) 23, 323, 620, 633, 646, 1109
BspQI GCTCTTC 2 cut(s) 342, 1320
BspTNI GGTCTC 1 cut(s) 350
BsrFI RCCGGY 1 cut(s) 1274
BsrI ACTGG 2 cut(s) 96, 1291
BssAI RCCGGY 1 cut(s) 1274
BssECI CCNNGG 1 cut(s) 435
BssMI GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
BssNI GRCGYC 1 cut(s) 58
Bst4CI ACNGT 6 cut(s) 158, 450, 566, 862, 1074, 1294
Bst6I CTCTTC 3 cut(s) 342, 369, 1320
BstACI GRCGYC 1 cut(s) 58
BstBAI YACGTR 1 cut(s) 896
BstC8I GCNNGC 1 cut(s) 1020
BstDEI CTNAG 5 cut(s) 48, 354, 755, 955, 1380
BstENI CCTNNNNNAGG 1 cut(s) 812
BstF5I GGATG 3 cut(s) 949, 1045, 1096
BstFNI CGCG 1 cut(s) 63
BstKTI GATC 9 cut(s) 31, 318, 615, 628, 654, 1117, 1177, 1368, 1401
BstMAI GTCTC 1 cut(s) 350
BstMBI GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
BstMCI CGRYCG 1 cut(s) 615
BstMWI GCNNNNNNNGC 6 cut(s) 75, 281, 973, 1280, 1336, 1415
BstNSI RCATGY 1 cut(s) 893
BstSCI CCNGG 2 cut(s) 434, 1043
BstSFI CTRYAG 1 cut(s) 150
BstSNI TACGTA 1 cut(s) 896
BstUI CGCG 1 cut(s) 63
BstV1I GCAGC 3 cut(s) 344, 535, 1396
BstV2I GAAGAC 2 cut(s) 1001, 1383
BstX2I RGATCY 3 cut(s) 625, 1174, 1398
BstYI RGATCY 3 cut(s) 625, 1174, 1398
Bsu15I ATCGAT 1 cut(s) 615
BsuRI GGCC 3 cut(s) 98, 1110, 1274
BsuTUI ATCGAT 1 cut(s) 615
BtsCI GGATG 3 cut(s) 949, 1045, 1096
BtsIMutI CAGTG 2 cut(s) 455, 1088
BveI ACCTGC 1 cut(s) 508
Cac8I GCNNGC 1 cut(s) 1020
CaiI CAGNNNCTG 3 cut(s) 551, 839, 1379
Cfr10I RCCGGY 1 cut(s) 1274
ClaI ATCGAT 1 cut(s) 615
CseI GACGC 2 cut(s) 52, 67
Csp6I GTAC 5 cut(s) 893, 897, 911, 1129, 1290
CviAII CATG 8 cut(s) 266, 424, 851, 890, 1015, 1132, 1165, 1258
CviQI GTAC 5 cut(s) 893, 897, 911, 1129, 1290
DdeI CTNAG 5 cut(s) 48, 354, 755, 955, 1380
DpnI GATC 9 cut(s) 30, 317, 614, 627, 653, 1116, 1176, 1367, 1400
DpnII GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
DriI GACNNNNNGTC 1 cut(s) 62
Eam1104I CTCTTC 3 cut(s) 342, 369, 1320
Eam1105I GACNNNNNGTC 1 cut(s) 62
EarI CTCTTC 3 cut(s) 342, 369, 1320
EciI GGCGGA 1 cut(s) 13
Eco105I TACGTA 1 cut(s) 896
Eco31I GGTCTC 1 cut(s) 350
Eco57I CTGAAG 3 cut(s) 323, 992, 1064
EcoNI CCTNNNNNAGG 1 cut(s) 812
FaeI CATG 8 cut(s) 269, 427, 854, 893, 1018, 1135, 1168, 1261
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FaqI GGGAC 1 cut(s) 692
FatI CATG 8 cut(s) 265, 423, 850, 889, 1014, 1131, 1164, 1257
FauI CCCGC 1 cut(s) 1192
Fnu4HI GCNGC 4 cut(s) 333, 549, 752, 1410
FokI GGATG 3 cut(s) 956, 1052, 1103
Fsp4HI GCNGC 4 cut(s) 333, 549, 752, 1410
FspBI CTAG 3 cut(s) 122, 129, 1026
GluI GCNGC 4 cut(s) 333, 549, 752, 1410
GsaI CCCAGC 2 cut(s) 555, 1090
GsuI CTGGAG 3 cut(s) 58, 113, 1319
HaeIII GGCC 3 cut(s) 98, 1110, 1274
HapII CCGG 4 cut(s) 435, 1045, 1241, 1275
HgaI GACGC 2 cut(s) 52, 67
Hin1I GRCGYC 1 cut(s) 58
Hin1II CATG 8 cut(s) 269, 427, 854, 893, 1018, 1135, 1168, 1261
HincII GTYRAC 1 cut(s) 952
HindII GTYRAC 1 cut(s) 952
HinfI GANTC 3 cut(s) 574, 1011, 1190
HpaI GTTAAC 1 cut(s) 952
HpaII CCGG 4 cut(s) 435, 1045, 1241, 1275
HphI GGTGA 2 cut(s) 310, 1289
Hpy166II GTNNAC 2 cut(s) 952, 1123
Hpy188I TCNGA 6 cut(s) 342, 511, 612, 762, 841, 1299
Hpy188III TCNNGA 6 cut(s) 112, 649, 655, 734, 812, 1322
Hpy8I GTNNAC 2 cut(s) 952, 1123
Hpy99I CGWCG 4 cut(s) 60, 63, 68, 83
HpyAV CCTTC 5 cut(s) 395, 667, 818, 929, 1162
HpyCH4III ACNGT 6 cut(s) 158, 450, 566, 862, 1074, 1294
HpyCH4IV ACGT 3 cut(s) 58, 846, 895
HpyCH4V TGCA 6 cut(s) 7, 108, 284, 453, 517, 833
HpyF10VI GCNNNNNNNGC 6 cut(s) 75, 281, 973, 1280, 1336, 1415
HpyF3I CTNAG 5 cut(s) 48, 354, 755, 955, 1380
HpySE526I ACGT 3 cut(s) 58, 846, 895
Hsp92I GRCGYC 1 cut(s) 58
Hsp92II CATG 8 cut(s) 269, 427, 854, 893, 1018, 1135, 1168, 1261
KspAI GTTAAC 1 cut(s) 952
Kzo9I GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
LguI GCTCTTC 2 cut(s) 342, 1320
LmnI GCTCC 3 cut(s) 17, 497, 637
Lsp1109I GCAGC 3 cut(s) 344, 535, 1396
LweI GCATC 4 cut(s) 73, 117, 934, 1030
MaeI CTAG 3 cut(s) 122, 129, 1026
MaeII ACGT 3 cut(s) 58, 846, 895
MaeIII GTNAC 5 cut(s) 218, 427, 444, 566, 1266
MalI GATC 9 cut(s) 30, 317, 614, 627, 653, 1116, 1176, 1367, 1400
MboI GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
MflI RGATCY 3 cut(s) 625, 1174, 1398
MhlI GDGCHC 1 cut(s) 296
MluCI AATT 6 cut(s) 322, 345, 409, 1059, 1149, 1340
MlyI GAGTC 1 cut(s) 1005
MmeI TCCRAC 1 cut(s) 910
MroXI GAANNNNTTC 2 cut(s) 1153, 1189
MseI TTAA 2 cut(s) 951, 1062
MslI CAYNNNNRTG 1 cut(s) 270
MspA1I CMGCKG 2 cut(s) 548, 710
MspI CCGG 4 cut(s) 435, 1045, 1241, 1275
MspR9I CCNGG 2 cut(s) 436, 1045
MvnI CGCG 1 cut(s) 63
MwoI GCNNNNNNNGC 6 cut(s) 75, 281, 973, 1280, 1336, 1415
NciI CCSGG 2 cut(s) 436, 1045
NdeII GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
NlaIII CATG 8 cut(s) 269, 427, 854, 893, 1018, 1135, 1168, 1261
NlaIV GGNNCC 3 cut(s) 19, 557, 627
NmeAIII GCCGAG 1 cut(s) 1086
NmuCI GTSAC 3 cut(s) 427, 566, 1266
NspI RCATGY 1 cut(s) 893
PciI ACATGT 1 cut(s) 889
PciSI GCTCTTC 2 cut(s) 342, 1320
PdmI GAANNNNTTC 2 cut(s) 1153, 1189
PfeI GAWTC 2 cut(s) 574, 1190
PkrI GCNGC 4 cut(s) 334, 550, 753, 1411
Ple19I CGATCG 1 cut(s) 615
PleI GAGTC 1 cut(s) 1005
PpsI GAGTC 1 cut(s) 1005
Ppu21I YACGTR 1 cut(s) 896
PscI ACATGT 1 cut(s) 889
PspFI CCCAGC 2 cut(s) 551, 1086
PspN4I GGNNCC 3 cut(s) 19, 557, 627
PstNI CAGNNNCTG 3 cut(s) 551, 839, 1379
PsuI RGATCY 3 cut(s) 625, 1174, 1398
PvuI CGATCG 1 cut(s) 615
PvuII CAGCTG 2 cut(s) 548, 710
RsaI GTAC 5 cut(s) 894, 898, 912, 1130, 1291
RsaNI GTAC 5 cut(s) 893, 897, 911, 1129, 1290
RseI CAYNNNNRTG 1 cut(s) 270
SapI GCTCTTC 2 cut(s) 342, 1320
SaqAI TTAA 2 cut(s) 951, 1062
SatI GCNGC 4 cut(s) 333, 549, 752, 1410
Sau3AI GATC 9 cut(s) 28, 315, 612, 625, 651, 1114, 1174, 1365, 1398
SchI GAGTC 1 cut(s) 1005
ScrFI CCNGG 2 cut(s) 436, 1045
SduI GDGCHC 1 cut(s) 296
SfaNI GCATC 4 cut(s) 73, 117, 934, 1030
SfcI CTRYAG 1 cut(s) 150
SmiMI CAYNNNNRTG 1 cut(s) 270
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
SnaBI TACGTA 1 cut(s) 896
SpeI ACTAGT 1 cut(s) 1025
Sse9I AATT 6 cut(s) 322, 345, 409, 1059, 1149, 1340
SsiI CCGC 6 cut(s) 24, 36, 751, 947, 1199, 1412
SspMI CTAG 3 cut(s) 122, 129, 1026
StyD4I CCNGG 2 cut(s) 434, 1043
TaaI ACNGT 6 cut(s) 158, 450, 566, 862, 1074, 1294
TaiI ACGT 3 cut(s) 61, 849, 898
TaqI TCGA 4 cut(s) 81, 615, 989, 1009
TasI AATT 6 cut(s) 322, 345, 409, 1059, 1149, 1340
TatI WGTACW 2 cut(s) 910, 1128
TauI GCSGC 1 cut(s) 754
TfiI GAWTC 2 cut(s) 574, 1190
Tru1I TTAA 2 cut(s) 951, 1062
Tru9I TTAA 2 cut(s) 951, 1062
TscAI CASTG 2 cut(s) 455, 1088
TseFI GTSAC 3 cut(s) 427, 566, 1266
TseI GCWGC 3 cut(s) 332, 548, 1409
Tsp45I GTSAC 3 cut(s) 427, 566, 1266
TspDTI ATGAA 3 cut(s) 254, 911, 1181
TspRI CASTG 2 cut(s) 455, 1088
XagI CCTNNNNNAGG 1 cut(s) 812
XapI RAATTY 2 cut(s) 345, 409
XceI RCATGY 1 cut(s) 893
XmnI GAANNNNTTC 2 cut(s) 1153, 1189
XspI CTAG 3 cut(s) 122, 129, 1026
ZraI GACGTC 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.