Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62000 AT5G62000 AT5G62000 AT5G62000 AT5G62000 |
| fragaria_vesca | FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 |
| malus_domestica | MD06G1132100.v1.1 MD14G1148500.v1.1 |
| prunus_persica | Prupe.5G143100_v2.0.a1 Prupe.5G143100_v2.0.a1 Prupe.5G143100_v2.0.a1 |
| pyrus_communis | pycom06g12370 pycom14g12320 pycom14g12330 |
| rosa_chinensis | RchiOBHm_Chr7g0188911 |
| rosa_laevigata | RLG00000004652 |
| rosa_multiflora | Rmu_co8328567.1_g000001 Rmu_ssc0000411.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00265950 |
| rosa_rugosa | Rorug06G0494400 Rorug06G0494500 |
| rosa_samantha | Rh7AG099400 Rh7BG101500 Rh7CG102800 Rh7DG101200 |
| rosa_wichuraiana | Rw7G008560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 259 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 236, 1942 |
| Acc16I | TGCGCA | 1 cut(s) | 396 |
| Acc36I | ACCTGC | 2 cut(s) | 259, 1735 |
| Acc65I | GGTACC | 1 cut(s) | 1723 |
| AccB1I | GGYRCC | 1 cut(s) | 1723 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 870, 1568 |
| AccI | GTMKAC | 1 cut(s) | 906 |
| AclWI | GGATC | 8 cut(s) | 126, 1070, 1101, 1489, 1553, 2256, 2387, 2524 |
| AcoI | YGGCCR | 4 cut(s) | 861, 1088, 1826, 2236 |
| AcsI | RAATTY | 1 cut(s) | 1411 |
| AcuI | CTGAAG | 2 cut(s) | 1416, 1721 |
| AcvI | CACGTG | 1 cut(s) | 1841 |
| AcyI | GRCGYC | 1 cut(s) | 2532 |
| AdeI | CACNNNGTG | 1 cut(s) | 530 |
| AfaI | GTAC | 4 cut(s) | 523, 858, 1291, 1725 |
| AfeI | AGCGCT | 1 cut(s) | 2566 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 108, 577, 870, 1325, 1506, 1545, 1568, 2245, 2568 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2536 |
| AjiI | CACGTC | 1 cut(s) | 1456 |
| AjnI | CCWGG | 4 cut(s) | 288, 477, 917, 1505 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 762, 794, 2490, 2522 |
| AleI | CACNNNNGTG | 1 cut(s) | 195 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 525, 557, 1481, 1513 |
| AluBI | AGCT | 7 cut(s) | 184, 334, 714, 1184, 1886, 2290, 2481 |
| AluI | AGCT | 7 cut(s) | 184, 334, 714, 1184, 1886, 2290, 2481 |
| Alw26I | GTCTC | 9 cut(s) | 74, 97, 572, 591, 1124, 1697, 1749, 1928, 2022 |
| AlwI | GGATC | 8 cut(s) | 126, 1070, 1101, 1489, 1553, 2256, 2387, 2524 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1736 |
| Ama87I | CYCGRG | 1 cut(s) | 2467 |
| Aor51HI | AGCGCT | 1 cut(s) | 2566 |
| AoxI | GGCC | 6 cut(s) | 861, 1088, 1223, 1232, 1826, 2236 |
| ApeKI | GCWGC | 4 cut(s) | 137, 167, 1730, 2042 |
| ApoI | RAATTY | 1 cut(s) | 1411 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2285, 2317 |
| AseI | ATTAAT | 1 cut(s) | 351 |
| Asp718I | GGTACC | 1 cut(s) | 1723 |
| AspA2I | CCTAGG | 1 cut(s) | 1220 |
| AspLEI | GCGC | 4 cut(s) | 397, 454, 1882, 2567 |
| AspS9I | GGNCC | 5 cut(s) | 157, 203, 1233, 1309, 2080 |
| AsuC2I | CCSGG | 3 cut(s) | 662, 2468, 2469 |
| AsuHPI | GGTGA | 4 cut(s) | 1129, 1596, 2058, 2399 |
| AvaI | CYCGRG | 1 cut(s) | 2467 |
| AvaII | GGWCC | 4 cut(s) | 157, 203, 1309, 2080 |
| AvrII | CCTAGG | 1 cut(s) | 1220 |
| AxyI | CCTNAGG | 4 cut(s) | 75, 162, 414, 1719 |
| BalI | TGGCCA | 3 cut(s) | 863, 1090, 1828 |
| BanI | GGYRCC | 1 cut(s) | 1723 |
| BanII | GRGCYC | 1 cut(s) | 929 |
| BbrPI | CACGTG | 1 cut(s) | 1841 |
| BbsI | GAAGAC | 3 cut(s) | 232, 813, 2143 |
| BbvCI | CCTCAGC | 1 cut(s) | 1501 |
| BbvI | GCAGC | 4 cut(s) | 124, 154, 1742, 2029 |
| BccI | CCATC | 4 cut(s) | 937, 1116, 1570, 2317 |
| BceAI | ACGGC | 2 cut(s) | 802, 2223 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1643, 1677 |
| BciT130I | CCWGG | 4 cut(s) | 290, 479, 919, 1507 |
| BciVI | GTATCC | 1 cut(s) | 1572 |
| BcnI | CCSGG | 3 cut(s) | 662, 2468, 2469 |
| BcoDI | GTCTC | 9 cut(s) | 74, 97, 572, 591, 1124, 1697, 1749, 1928, 2022 |
| BfaI | CTAG | 9 cut(s) | 84, 222, 725, 834, 1083, 1137, 1221, 1470, 1893 |
| BfmI | CTRYAG | 4 cut(s) | 686, 1728, 1960, 2482 |
| BfoI | RGCGCY | 2 cut(s) | 455, 2568 |
| BfuAI | ACCTGC | 2 cut(s) | 259, 1735 |
| BfuI | GTATCC | 1 cut(s) | 1572 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1231 |
| BisI | GCNGC | 6 cut(s) | 138, 141, 168, 294, 1731, 2043 |
| BlnI | CCTAGG | 1 cut(s) | 1220 |
| BlpI | GCTNAGC | 2 cut(s) | 144, 2286 |
| BlsI | GCNGC | 6 cut(s) | 139, 142, 169, 295, 1732, 2044 |
| BmcAI | AGTACT | 1 cut(s) | 858 |
| Bme1390I | CCNGG | 7 cut(s) | 290, 479, 662, 919, 1507, 2468, 2469 |
| Bme18I | GGWCC | 4 cut(s) | 157, 203, 1309, 2080 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2536 |
| BmeT110I | CYCGRG | 1 cut(s) | 2467 |
| BmgBI | CACGTC | 1 cut(s) | 1456 |
| BmgT120I | GGNCC | 5 cut(s) | 157, 203, 1233, 1309, 2080 |
| BmiI | GGNNCC | 7 cut(s) | 159, 219, 476, 1029, 1311, 1725, 2328 |
| BmrFI | CCNGG | 7 cut(s) | 290, 479, 662, 919, 1507, 2468, 2469 |
| BpiI | GAAGAC | 3 cut(s) | 232, 813, 2143 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1032, 1501, 1887 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 144, 2286 |
| BpuEI | CTTGAG | 7 cut(s) | 237, 588, 1097, 1387, 1651, 1860, 2176 |
| BpuMI | CCSGG | 3 cut(s) | 662, 2468, 2469 |
| BsaAI | YACGTR | 1 cut(s) | 1841 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1480 |
| BsaHI | GRCGYC | 1 cut(s) | 2532 |
| BsaI | GGTCTC | 1 cut(s) | 1697 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 108, 577, 870, 1325, 1506, 1545, 1568, 2245, 2568 |
| Bse118I | RCCGGY | 1 cut(s) | 101 |
| Bse1I | ACTGG | 5 cut(s) | 864, 1051, 1496, 1669, 1829 |
| Bse21I | CCTNAGG | 4 cut(s) | 75, 162, 414, 1719 |
| Bse3DI | GCAATG | 1 cut(s) | 1768 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1480 |
| BseBI | CCWGG | 4 cut(s) | 290, 479, 919, 1507 |
| BseGI | GGATG | 8 cut(s) | 509, 565, 1132, 1444, 1500, 1562, 2161, 2176 |
| BseJI | GATNNNNATC | 1 cut(s) | 1480 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 108, 577, 870, 1325, 1506, 1545, 1568, 2245, 2568 |
| BseMI | GCAATG | 1 cut(s) | 1768 |
| BseNI | ACTGG | 5 cut(s) | 864, 1051, 1496, 1669, 1829 |
| BseRI | GAGGAG | 6 cut(s) | 43, 46, 54, 1182, 1946, 2288 |
| BseXI | GCAGC | 4 cut(s) | 124, 154, 1742, 2029 |
| BseYI | CCCAGC | 1 cut(s) | 2567 |
| Bsh1285I | CGRYCG | 1 cut(s) | 235 |
| BshFI | GGCC | 6 cut(s) | 863, 1090, 1225, 1234, 1828, 2238 |
| BshNI | GGYRCC | 1 cut(s) | 1723 |
| BsiEI | CGRYCG | 1 cut(s) | 235 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2467 |
| BsiSI | CCGG | 4 cut(s) | 102, 661, 1539, 2468 |
| BslFI | GGGAC | 4 cut(s) | 904, 1561, 2014, 2485 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 108, 577, 870, 1325, 1506, 1545, 1568, 2245, 2568 |
| BsmAI | GTCTC | 9 cut(s) | 74, 97, 572, 591, 1124, 1697, 1749, 1928, 2022 |
| BsmBI | CGTCTC | 1 cut(s) | 1749 |
| BsmFI | GGGAC | 4 cut(s) | 904, 1561, 2014, 2485 |
| BsmI | GAATGC | 4 cut(s) | 439, 484, 1816, 1974 |
| BsnI | GGCC | 6 cut(s) | 863, 1090, 1225, 1234, 1828, 2238 |
| Bso31I | GGTCTC | 1 cut(s) | 1697 |
| BsoBI | CYCGRG | 1 cut(s) | 2467 |
| Bsp1286I | GDGCHC | 1 cut(s) | 929 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 144, 2286 |
| Bsp19I | CCATGG | 1 cut(s) | 1567 |
| BspANI | GGCC | 6 cut(s) | 863, 1090, 1225, 1234, 1828, 2238 |
| BspLI | GGNNCC | 7 cut(s) | 159, 219, 476, 1029, 1311, 1725, 2328 |
| BspMAI | CTGCAG | 2 cut(s) | 1732, 1964 |
| BspMI | ACCTGC | 2 cut(s) | 259, 1735 |
| BspPI | GGATC | 8 cut(s) | 126, 1070, 1101, 1489, 1553, 2256, 2387, 2524 |
| BspT107I | GGYRCC | 1 cut(s) | 1723 |
| BspTNI | GGTCTC | 1 cut(s) | 1697 |
| BsrDI | GCAATG | 1 cut(s) | 1768 |
| BsrFI | RCCGGY | 1 cut(s) | 101 |
| BsrI | ACTGG | 5 cut(s) | 864, 1051, 1496, 1669, 1829 |
| BssAI | RCCGGY | 1 cut(s) | 101 |
| BssNI | GRCGYC | 1 cut(s) | 2532 |
| BssT1I | CCWWGG | 4 cut(s) | 1220, 1567, 1750, 2396 |
| Bst2UI | CCWGG | 4 cut(s) | 290, 479, 919, 1507 |
| Bst4CI | ACNGT | 2 cut(s) | 217, 904 |
| Bst6I | CTCTTC | 6 cut(s) | 411, 462, 1017, 1062, 1273, 2358 |
| BstACI | GRCGYC | 1 cut(s) | 2532 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 737, 875, 1739 |
| BstBAI | YACGTR | 1 cut(s) | 1841 |
| BstDSI | CCRYGG | 3 cut(s) | 671, 1166, 1567 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1504 |
| BstF5I | GGATG | 8 cut(s) | 509, 565, 1132, 1444, 1500, 1562, 2161, 2176 |
| BstH2I | RGCGCY | 2 cut(s) | 455, 2568 |
| BstHHI | GCGC | 4 cut(s) | 397, 454, 1882, 2567 |
| BstMAI | GTCTC | 9 cut(s) | 74, 97, 572, 591, 1124, 1697, 1749, 1928, 2022 |
| BstMCI | CGRYCG | 1 cut(s) | 235 |
| BstNI | CCWGG | 4 cut(s) | 290, 479, 919, 1507 |
| BstNSI | RCATGY | 4 cut(s) | 557, 632, 847, 878 |
| BstSCI | CCNGG | 7 cut(s) | 288, 477, 660, 917, 1505, 2466, 2467 |
| BstSFI | CTRYAG | 4 cut(s) | 686, 1728, 1960, 2482 |
| BstV1I | GCAGC | 4 cut(s) | 124, 154, 1742, 2029 |
| BstV2I | GAAGAC | 3 cut(s) | 232, 813, 2143 |
| BstX2I | RGATCY | 4 cut(s) | 1106, 1481, 1558, 2248 |
| BstYI | RGATCY | 4 cut(s) | 1106, 1481, 1558, 2248 |
| Bsu36I | CCTNAGG | 4 cut(s) | 75, 162, 414, 1719 |
| BsuI | GTATCC | 1 cut(s) | 1572 |
| BsuRI | GGCC | 6 cut(s) | 863, 1090, 1225, 1234, 1828, 2238 |
| BtgI | CCRYGG | 3 cut(s) | 671, 1166, 1567 |
| BtgZI | GCGATG | 3 cut(s) | 750, 809, 1771 |
| BtrI | CACGTC | 1 cut(s) | 1456 |
| BtsCI | GGATG | 8 cut(s) | 509, 565, 1132, 1444, 1500, 1562, 2161, 2176 |
| BtsIMutI | CAGTG | 2 cut(s) | 1676, 2250 |
| BveI | ACCTGC | 2 cut(s) | 259, 1735 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1736 |
| CfoI | GCGC | 4 cut(s) | 397, 454, 1882, 2567 |
| Cfr10I | RCCGGY | 1 cut(s) | 101 |
| Cfr13I | GGNCC | 5 cut(s) | 157, 203, 1233, 1309, 2080 |
| Cfr9I | CCCGGG | 1 cut(s) | 2467 |
| CseI | GACGC | 2 cut(s) | 1731, 2540 |
| Csp6I | GTAC | 4 cut(s) | 522, 857, 1290, 1724 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1827, 1862 |
| CviQI | GTAC | 4 cut(s) | 522, 857, 1290, 1724 |
| DraI | TTTAAA | 1 cut(s) | 363 |
| DraIII | CACNNNGTG | 1 cut(s) | 530 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 236, 1942 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2536 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 236, 1942 |
| EaeI | YGGCCR | 4 cut(s) | 861, 1088, 1826, 2236 |
| Eam1104I | CTCTTC | 6 cut(s) | 411, 462, 1017, 1062, 1273, 2358 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2536 |
| EarI | CTCTTC | 6 cut(s) | 411, 462, 1017, 1062, 1273, 2358 |
| Eco130I | CCWWGG | 4 cut(s) | 1220, 1567, 1750, 2396 |
| Eco147I | AGGCCT | 1 cut(s) | 1225 |
| Eco24I | GRGCYC | 1 cut(s) | 929 |
| Eco31I | GGTCTC | 1 cut(s) | 1697 |
| Eco47I | GGWCC | 4 cut(s) | 157, 203, 1309, 2080 |
| Eco47III | AGCGCT | 1 cut(s) | 2566 |
| Eco57I | CTGAAG | 2 cut(s) | 1416, 1721 |
| Eco72I | CACGTG | 1 cut(s) | 1841 |
| Eco81I | CCTNAGG | 4 cut(s) | 75, 162, 414, 1719 |
| Eco88I | CYCGRG | 1 cut(s) | 2467 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1504 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2080 |
| EcoRI | GAATTC | 1 cut(s) | 1411 |
| EcoRII | CCWGG | 4 cut(s) | 288, 477, 917, 1505 |
| EcoT14I | CCWWGG | 4 cut(s) | 1220, 1567, 1750, 2396 |
| EcoT22I | ATGCAT | 1 cut(s) | 849 |
| EcoT38I | GRGCYC | 1 cut(s) | 929 |
| ErhI | CCWWGG | 4 cut(s) | 1220, 1567, 1750, 2396 |
| Esp3I | CGTCTC | 1 cut(s) | 1749 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 441, 473, 1613, 1645 |
| FaqI | GGGAC | 4 cut(s) | 904, 1561, 2014, 2485 |
| FauI | CCCGC | 1 cut(s) | 2038 |
| FblI | GTMKAC | 1 cut(s) | 906 |
| Fnu4HI | GCNGC | 6 cut(s) | 138, 141, 168, 294, 1731, 2043 |
| FokI | GGATG | 8 cut(s) | 496, 572, 1139, 1451, 1507, 1549, 2148, 2183 |
| FriOI | GRGCYC | 1 cut(s) | 929 |
| Fsp4HI | GCNGC | 6 cut(s) | 138, 141, 168, 294, 1731, 2043 |
| FspBI | CTAG | 9 cut(s) | 84, 222, 725, 834, 1083, 1137, 1221, 1470, 1893 |
| FspI | TGCGCA | 1 cut(s) | 396 |
| GlaI | GCGC | 4 cut(s) | 396, 453, 1881, 2566 |
| GluI | GCNGC | 6 cut(s) | 138, 141, 168, 294, 1731, 2043 |
| GsaI | CCCAGC | 1 cut(s) | 2571 |
| HaeII | RGCGCY | 2 cut(s) | 455, 2568 |
| HaeIII | GGCC | 6 cut(s) | 863, 1090, 1225, 1234, 1828, 2238 |
| HapII | CCGG | 4 cut(s) | 102, 661, 1539, 2468 |
| HgaI | GACGC | 2 cut(s) | 1731, 2540 |
| HhaI | GCGC | 4 cut(s) | 397, 454, 1882, 2567 |
| Hin1I | GRCGYC | 1 cut(s) | 2532 |
| Hin6I | GCGC | 4 cut(s) | 395, 452, 1880, 2565 |
| HinP1I | GCGC | 4 cut(s) | 395, 452, 1880, 2565 |
| HincII | GTYRAC | 2 cut(s) | 668, 1453 |
| HindII | GTYRAC | 2 cut(s) | 668, 1453 |
| HindIII | AAGCTT | 1 cut(s) | 332 |
| HpaII | CCGG | 4 cut(s) | 102, 661, 1539, 2468 |
| HphI | GGTGA | 4 cut(s) | 1129, 1596, 2058, 2399 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 286 |
| HpyCH4III | ACNGT | 2 cut(s) | 217, 904 |
| HpyCH4IV | ACGT | 4 cut(s) | 813, 1455, 1834, 1840 |
| HpySE526I | ACGT | 4 cut(s) | 813, 1455, 1834, 1840 |
| Hsp92I | GRCGYC | 1 cut(s) | 2532 |
| HspAI | GCGC | 4 cut(s) | 395, 452, 1880, 2565 |
| KpnI | GGTACC | 1 cut(s) | 1727 |
| KroI | GCCGGC | 1 cut(s) | 101 |
| KroNI | GCCGGC | 1 cut(s) | 103 |
| LmnI | GCTCC | 7 cut(s) | 719, 1033, 1195, 1408, 1897, 2332, 2487 |
| Lsp1109I | GCAGC | 4 cut(s) | 124, 154, 1742, 2029 |
| MaeI | CTAG | 9 cut(s) | 84, 222, 725, 834, 1083, 1137, 1221, 1470, 1893 |
| MaeII | ACGT | 4 cut(s) | 813, 1455, 1834, 1840 |
| MaeIII | GTNAC | 6 cut(s) | 68, 211, 1704, 1820, 1903, 2387 |
| MfeI | CAATTG | 1 cut(s) | 438 |
| MflI | RGATCY | 4 cut(s) | 1106, 1481, 1558, 2248 |
| MhlI | GDGCHC | 1 cut(s) | 929 |
| MlsI | TGGCCA | 3 cut(s) | 863, 1090, 1828 |
| MluCI | AATT | 6 cut(s) | 121, 438, 770, 1411, 1849, 2226 |
| MluNI | TGGCCA | 3 cut(s) | 863, 1090, 1828 |
| MlyI | GAGTC | 6 cut(s) | 246, 974, 1079, 1213, 1259, 2000 |
| MmeI | TCCRAC | 1 cut(s) | 537 |
| Mox20I | TGGCCA | 3 cut(s) | 863, 1090, 1828 |
| Mph1103I | ATGCAT | 1 cut(s) | 849 |
| MreI | CGCCGGCG | 1 cut(s) | 101 |
| MroNI | GCCGGC | 1 cut(s) | 101 |
| MscI | TGGCCA | 3 cut(s) | 863, 1090, 1828 |
| MseI | TTAA | 8 cut(s) | 351, 362, 773, 972, 1767, 1791, 2477, 2578 |
| MslI | CAYNNNNRTG | 3 cut(s) | 195, 558, 633 |
| Msp20I | TGGCCA | 3 cut(s) | 863, 1090, 1828 |
| MspA1I | CMGCKG | 3 cut(s) | 137, 1436, 1576 |
| MspI | CCGG | 4 cut(s) | 102, 661, 1539, 2468 |
| MspR9I | CCNGG | 7 cut(s) | 290, 479, 662, 919, 1507, 2468, 2469 |
| MunI | CAATTG | 1 cut(s) | 438 |
| Mva1269I | GAATGC | 4 cut(s) | 439, 484, 1816, 1974 |
| MvaI | CCWGG | 4 cut(s) | 290, 479, 919, 1507 |
| NaeI | GCCGGC | 1 cut(s) | 103 |
| NciI | CCSGG | 3 cut(s) | 662, 2468, 2469 |
| NcoI | CCATGG | 1 cut(s) | 1567 |
| NgoMIV | GCCGGC | 1 cut(s) | 101 |
| NlaIV | GGNNCC | 7 cut(s) | 159, 219, 476, 1029, 1311, 1725, 2328 |
| NmuCI | GTSAC | 3 cut(s) | 68, 211, 2387 |
| NsbI | TGCGCA | 1 cut(s) | 396 |
| NsiI | ATGCAT | 1 cut(s) | 849 |
| NspI | RCATGY | 4 cut(s) | 557, 632, 847, 878 |
| OliI | CACNNNNGTG | 1 cut(s) | 195 |
| PaeI | GCATGC | 3 cut(s) | 632, 847, 878 |
| PaqCI | CACCTGC | 1 cut(s) | 259 |
| PceI | AGGCCT | 1 cut(s) | 1225 |
| PctI | GAATGC | 4 cut(s) | 439, 484, 1816, 1974 |
| PdiI | GCCGGC | 1 cut(s) | 103 |
| PfeI | GAWTC | 5 cut(s) | 645, 999, 1626, 1637, 1712 |
| PflFI | GACNNNGTC | 1 cut(s) | 236 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 870, 1568 |
| PkrI | GCNGC | 6 cut(s) | 139, 142, 169, 295, 1732, 2044 |
| PleI | GAGTC | 6 cut(s) | 245, 973, 1078, 1212, 1259, 2000 |
| PmaCI | CACGTG | 1 cut(s) | 1841 |
| PmlI | CACGTG | 1 cut(s) | 1841 |
| PpsI | GAGTC | 6 cut(s) | 245, 973, 1078, 1212, 1259, 2000 |
| Ppu21I | YACGTR | 1 cut(s) | 1841 |
| PpuMI | RGGWCCY | 1 cut(s) | 2080 |
| PshBI | ATTAAT | 1 cut(s) | 351 |
| Psp5II | RGGWCCY | 1 cut(s) | 2080 |
| Psp6I | CCWGG | 4 cut(s) | 288, 477, 917, 1505 |
| PspCI | CACGTG | 1 cut(s) | 1841 |
| PspFI | CCCAGC | 1 cut(s) | 2567 |
| PspGI | CCWGG | 4 cut(s) | 288, 477, 917, 1505 |
| PspN4I | GGNNCC | 7 cut(s) | 159, 219, 476, 1029, 1311, 1725, 2328 |
| PspPI | GGNCC | 5 cut(s) | 157, 203, 1233, 1309, 2080 |
| PspPPI | RGGWCCY | 1 cut(s) | 2080 |
| PstI | CTGCAG | 2 cut(s) | 1732, 1964 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1736 |
| PsuI | RGATCY | 4 cut(s) | 1106, 1481, 1558, 2248 |
| PsyI | GACNNNGTC | 1 cut(s) | 236 |
| RsaI | GTAC | 4 cut(s) | 523, 858, 1291, 1725 |
| RsaNI | GTAC | 4 cut(s) | 522, 857, 1290, 1724 |
| RseI | CAYNNNNRTG | 3 cut(s) | 195, 558, 633 |
| SaqAI | TTAA | 8 cut(s) | 351, 362, 773, 972, 1767, 1791, 2477, 2578 |
| SatI | GCNGC | 6 cut(s) | 138, 141, 168, 294, 1731, 2043 |
| Sau96I | GGNCC | 5 cut(s) | 157, 203, 1233, 1309, 2080 |
| ScaI | AGTACT | 1 cut(s) | 858 |
| SchI | GAGTC | 6 cut(s) | 246, 974, 1079, 1213, 1259, 2000 |
| ScrFI | CCNGG | 7 cut(s) | 290, 479, 662, 919, 1507, 2468, 2469 |
| SduI | GDGCHC | 1 cut(s) | 929 |
| SfcI | CTRYAG | 4 cut(s) | 686, 1728, 1960, 2482 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1231 |
| SgrAI | CRCCGGYG | 1 cut(s) | 101 |
| SinI | GGWCC | 4 cut(s) | 157, 203, 1309, 2080 |
| SmaI | CCCGGG | 1 cut(s) | 2469 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 195, 558, 633 |
| SmlI | CTYRAG | 7 cut(s) | 252, 603, 1112, 1366, 1630, 1875, 2191 |
| SmoI | CTYRAG | 7 cut(s) | 252, 603, 1112, 1366, 1630, 1875, 2191 |
| SphI | GCATGC | 3 cut(s) | 632, 847, 878 |
| Sse9I | AATT | 6 cut(s) | 121, 438, 770, 1411, 1849, 2226 |
| SseBI | AGGCCT | 1 cut(s) | 1225 |
| SspMI | CTAG | 9 cut(s) | 84, 222, 725, 834, 1083, 1137, 1221, 1470, 1893 |
| StuI | AGGCCT | 1 cut(s) | 1225 |
| StyD4I | CCNGG | 7 cut(s) | 288, 477, 660, 917, 1505, 2466, 2467 |
| StyI | CCWWGG | 4 cut(s) | 1220, 1567, 1750, 2396 |
| TaaI | ACNGT | 2 cut(s) | 217, 904 |
| TaiI | ACGT | 4 cut(s) | 816, 1458, 1837, 1843 |
| TaqII | GACCGA | 1 cut(s) | 249 |
| TasI | AATT | 6 cut(s) | 121, 438, 770, 1411, 1849, 2226 |
| TatI | WGTACW | 2 cut(s) | 521, 856 |
| TauI | GCSGC | 2 cut(s) | 143, 296 |
| TfiI | GAWTC | 5 cut(s) | 645, 999, 1626, 1637, 1712 |
| Tru1I | TTAA | 8 cut(s) | 351, 362, 773, 972, 1767, 1791, 2477, 2578 |
| Tru9I | TTAA | 8 cut(s) | 351, 362, 773, 972, 1767, 1791, 2477, 2578 |
| TscAI | CASTG | 2 cut(s) | 1676, 2250 |
| TseFI | GTSAC | 3 cut(s) | 68, 211, 2387 |
| TseI | GCWGC | 4 cut(s) | 137, 167, 1730, 2042 |
| Tsp45I | GTSAC | 3 cut(s) | 68, 211, 2387 |
| TspGWI | ACGGA | 5 cut(s) | 85, 315, 688, 936, 1155 |
| TspMI | CCCGGG | 1 cut(s) | 2467 |
| TspRI | CASTG | 2 cut(s) | 1676, 2250 |
| Tth111I | GACNNNGTC | 1 cut(s) | 236 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 870, 1568 |
| VpaK11BI | GGWCC | 4 cut(s) | 157, 203, 1309, 2080 |
| VspI | ATTAAT | 1 cut(s) | 351 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1504 |
| XapI | RAATTY | 1 cut(s) | 1411 |
| XbaI | TCTAGA | 1 cut(s) | 1469 |
| XceI | RCATGY | 4 cut(s) | 557, 632, 847, 878 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1098 |
| XmaI | CCCGGG | 1 cut(s) | 2467 |
| XmaJI | CCTAGG | 1 cut(s) | 1220 |
| XmiI | GTMKAC | 1 cut(s) | 906 |
| XspI | CTAG | 9 cut(s) | 84, 222, 725, 834, 1083, 1137, 1221, 1470, 1893 |
| ZrmI | AGTACT | 1 cut(s) | 858 |
| Zsp2I | ATGCAT | 1 cut(s) | 849 |