Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62000 AT5G62000 AT5G62000 AT5G62000 AT5G62000 |
| fragaria_vesca | FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 |
| malus_domestica | MD06G1132100.v1.1 MD14G1148500.v1.1 |
| prunus_persica | Prupe.5G143100_v2.0.a1 Prupe.5G143100_v2.0.a1 Prupe.5G143100_v2.0.a1 |
| pyrus_communis | pycom06g12370 pycom14g12320 pycom14g12330 |
| rosa_chinensis | RchiOBHm_Chr7g0188911 |
| rosa_laevigata | RLG00000004652 |
| rosa_multiflora | Rmu_co8328567.1_g000001 Rmu_ssc0000411.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00265950 |
| rosa_rugosa | Rorug06G0494400 Rorug06G0494500 |
| rosa_samantha | Rh7AG099400 Rh7BG101500 Rh7CG102800 Rh7DG101200 |
| rosa_wichuraiana | Rw7G008560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 268 |
| AatII | GACGTC | 1 cut(s) | 8 |
| Acc16I | TGCGCA | 1 cut(s) | 405 |
| Acc36I | ACCTGC | 1 cut(s) | 268 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 619, 2059 |
| AccBSI | CCGCTC | 1 cut(s) | 217 |
| AccI | GTMKAC | 5 cut(s) | 290, 915, 1317, 1424, 2336 |
| AccII | CGCG | 3 cut(s) | 232, 234, 1246 |
| AccIII | TCCGGA | 1 cut(s) | 1270 |
| AclWI | GGATC | 3 cut(s) | 1306, 1647, 2369 |
| AcoI | YGGCCR | 2 cut(s) | 156, 1247 |
| AcsI | RAATTY | 5 cut(s) | 1141, 1367, 2124, 2288, 2387 |
| AcuI | CTGAAG | 2 cut(s) | 816, 1736 |
| AcyI | GRCGYC | 2 cut(s) | 5, 287 |
| AfaI | GTAC | 6 cut(s) | 492, 867, 968, 1326, 1489, 1881 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 126, 158, 210, 236, 619, 1512, 2059, 2498 |
| AflII | CTTAAG | 1 cut(s) | 1121 |
| AflIII | ACRYGT | 2 cut(s) | 591, 784 |
| AjiI | CACGTC | 1 cut(s) | 800 |
| AjnI | CCWGG | 2 cut(s) | 612, 1289 |
| AleI | CACNNNNGTG | 1 cut(s) | 861 |
| Alw26I | GTCTC | 1 cut(s) | 600 |
| AlwI | GGATC | 3 cut(s) | 1306, 1647, 2369 |
| Ama87I | CYCGRG | 2 cut(s) | 1507, 2450 |
| Aor13HI | TCCGGA | 1 cut(s) | 1270 |
| AoxI | GGCC | 4 cut(s) | 156, 212, 1241, 1247 |
| ApeKI | GCWGC | 3 cut(s) | 1947, 2134, 2326 |
| ApoI | RAATTY | 5 cut(s) | 1141, 1367, 2124, 2288, 2387 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 383, 415, 2267, 2299 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 576, 1630, 2411 |
| AspA2I | CCTAGG | 1 cut(s) | 479 |
| AspLEI | GCGC | 4 cut(s) | 209, 234, 406, 654 |
| AspS9I | GGNCC | 7 cut(s) | 212, 1116, 1671, 1721, 2275, 2308, 2454 |
| AsuC2I | CCSGG | 4 cut(s) | 211, 353, 2451, 2452 |
| AsuHPI | GGTGA | 7 cut(s) | 367, 779, 1040, 1138, 1279, 1784, 2309 |
| AsuII | TTCGAA | 1 cut(s) | 1469 |
| AvaI | CYCGRG | 2 cut(s) | 1507, 2450 |
| AvaII | GGWCC | 6 cut(s) | 1116, 1671, 1721, 2275, 2308, 2454 |
| AvrII | CCTAGG | 1 cut(s) | 479 |
| AxyI | CCTNAGG | 2 cut(s) | 261, 554 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 402, 434 |
| BauI | CACGAG | 1 cut(s) | 218 |
| BbvCI | CCTCAGC | 1 cut(s) | 2496 |
| BbvI | GCAGC | 3 cut(s) | 1934, 2146, 2313 |
| BccI | CCATC | 4 cut(s) | 835, 1125, 1864, 2141 |
| BceAI | ACGGC | 3 cut(s) | 49, 124, 1428 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 383, 417 |
| BciT130I | CCWGG | 2 cut(s) | 614, 1291 |
| BclI | TGATCA | 4 cut(s) | 357, 961, 1594, 1867 |
| BcnI | CCSGG | 4 cut(s) | 211, 353, 2451, 2452 |
| BcoDI | GTCTC | 1 cut(s) | 600 |
| BfaI | CTAG | 3 cut(s) | 480, 843, 2178 |
| BfmI | CTRYAG | 2 cut(s) | 996, 1602 |
| BfoI | RGCGCY | 1 cut(s) | 655 |
| BfrI | CTTAAG | 1 cut(s) | 1121 |
| BfuAI | ACCTGC | 1 cut(s) | 268 |
| BisI | GCNGC | 9 cut(s) | 156, 215, 230, 560, 1244, 1247, 1948, 2135, 2327 |
| BlnI | CCTAGG | 1 cut(s) | 479 |
| BlsI | GCNGC | 9 cut(s) | 157, 216, 231, 561, 1245, 1248, 1949, 2136, 2328 |
| Bme1390I | CCNGG | 6 cut(s) | 211, 353, 614, 1291, 2451, 2452 |
| Bme18I | GGWCC | 6 cut(s) | 1116, 1671, 1721, 2275, 2308, 2454 |
| BmeT110I | CYCGRG | 2 cut(s) | 1507, 2450 |
| BmgBI | CACGTC | 1 cut(s) | 800 |
| BmgT120I | GGNCC | 7 cut(s) | 212, 1116, 1671, 1721, 2275, 2308, 2454 |
| BmiI | GGNNCC | 6 cut(s) | 901, 1118, 1260, 1722, 2310, 2455 |
| BmrFI | CCNGG | 6 cut(s) | 211, 353, 614, 1291, 2451, 2452 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 65, 97 |
| BpmI | CTGGAG | 1 cut(s) | 1023 |
| Bpu10I | CCTNAGC | 2 cut(s) | 423, 2496 |
| Bpu14I | TTCGAA | 1 cut(s) | 1469 |
| BpuEI | CTTGAG | 1 cut(s) | 1681 |
| BpuMI | CCSGG | 4 cut(s) | 211, 353, 2451, 2452 |
| BsaAI | YACGTR | 1 cut(s) | 785 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2080, 2414 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 287 |
| BsaWI | WCCGGW | 1 cut(s) | 1270 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1388, 1418 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 126, 158, 210, 236, 619, 1512, 2059, 2498 |
| Bse118I | RCCGGY | 3 cut(s) | 119, 151, 158 |
| Bse1I | ACTGG | 5 cut(s) | 320, 591, 1060, 1502, 1641 |
| Bse21I | CCTNAGG | 2 cut(s) | 261, 554 |
| Bse3DI | GCAATG | 4 cut(s) | 810, 826, 2010, 2486 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2080, 2414 |
| BseAI | TCCGGA | 1 cut(s) | 1270 |
| BseBI | CCWGG | 2 cut(s) | 614, 1291 |
| BseGI | GGATG | 5 cut(s) | 574, 1008, 1141, 1506, 2512 |
| BseJI | GATNNNNATC | 2 cut(s) | 2080, 2414 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 126, 158, 210, 236, 619, 1512, 2059, 2498 |
| BseMI | GCAATG | 4 cut(s) | 810, 826, 2010, 2486 |
| BseMII | CTCAG | 7 cut(s) | 275, 414, 534, 933, 1430, 2144, 2487 |
| BseNI | ACTGG | 5 cut(s) | 320, 591, 1060, 1502, 1641 |
| BseRI | GAGGAG | 8 cut(s) | 63, 66, 69, 72, 75, 78, 1191, 2489 |
| BseX3I | CGGCCG | 1 cut(s) | 156 |
| BseXI | GCAGC | 3 cut(s) | 1934, 2146, 2313 |
| BseYI | CCCAGC | 2 cut(s) | 1087, 2482 |
| BsgI | GTGCAG | 3 cut(s) | 162, 465, 1413 |
| Bsh1236I | CGCG | 3 cut(s) | 232, 234, 1246 |
| Bsh1285I | CGRYCG | 1 cut(s) | 159 |
| BshFI | GGCC | 4 cut(s) | 158, 214, 1243, 1249 |
| BsiEI | CGRYCG | 1 cut(s) | 159 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1507, 2450 |
| BsiSI | CCGG | 7 cut(s) | 120, 152, 159, 210, 352, 1271, 2451 |
| BslFI | GGGAC | 3 cut(s) | 279, 1102, 2467 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 126, 158, 210, 236, 619, 1512, 2059, 2498 |
| BsmAI | GTCTC | 1 cut(s) | 600 |
| BsmFI | GGGAC | 3 cut(s) | 279, 1102, 2467 |
| BsmI | GAATGC | 4 cut(s) | 121, 578, 1630, 1962 |
| BsnI | GGCC | 4 cut(s) | 158, 214, 1243, 1249 |
| BsoBI | CYCGRG | 2 cut(s) | 1507, 2450 |
| Bsp119I | TTCGAA | 1 cut(s) | 1469 |
| Bsp13I | TCCGGA | 1 cut(s) | 1270 |
| Bsp143I | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| Bsp19I | CCATGG | 1 cut(s) | 1795 |
| BspANI | GGCC | 4 cut(s) | 158, 214, 1243, 1249 |
| BspCNI | CTCAG | 7 cut(s) | 274, 415, 533, 934, 1429, 2143, 2488 |
| BspEI | TCCGGA | 1 cut(s) | 1270 |
| BspFNI | CGCG | 3 cut(s) | 232, 234, 1246 |
| BspLI | GGNNCC | 6 cut(s) | 901, 1118, 1260, 1722, 2310, 2455 |
| BspMI | ACCTGC | 1 cut(s) | 268 |
| BspPI | GGATC | 3 cut(s) | 1306, 1647, 2369 |
| BspQI | GCTCTTC | 1 cut(s) | 2176 |
| BspT104I | TTCGAA | 1 cut(s) | 1469 |
| BspTI | CTTAAG | 1 cut(s) | 1121 |
| BsrBI | CCGCTC | 1 cut(s) | 217 |
| BsrDI | GCAATG | 4 cut(s) | 810, 826, 2010, 2486 |
| BsrFI | RCCGGY | 3 cut(s) | 119, 151, 158 |
| BsrI | ACTGG | 5 cut(s) | 320, 591, 1060, 1502, 1641 |
| BssAI | RCCGGY | 3 cut(s) | 119, 151, 158 |
| BssMI | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| BssNAI | GTATAC | 1 cut(s) | 2337 |
| BssNI | GRCGYC | 2 cut(s) | 5, 287 |
| BssSI | CACGAG | 1 cut(s) | 218 |
| BssT1I | CCWWGG | 7 cut(s) | 479, 680, 859, 926, 1795, 1819, 2190 |
| Bst1107I | GTATAC | 1 cut(s) | 2337 |
| Bst2BI | CACGAG | 1 cut(s) | 218 |
| Bst2UI | CCWGG | 2 cut(s) | 614, 1291 |
| Bst4CI | ACNGT | 6 cut(s) | 137, 226, 348, 913, 1315, 1574 |
| Bst6I | CTCTTC | 3 cut(s) | 1224, 1282, 2176 |
| BstACI | GRCGYC | 2 cut(s) | 5, 287 |
| BstAFI | CTTAAG | 1 cut(s) | 1121 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 746, 884, 2492 |
| BstBAI | YACGTR | 1 cut(s) | 785 |
| BstBI | TTCGAA | 1 cut(s) | 1469 |
| BstDSI | CCRYGG | 3 cut(s) | 1244, 1795, 2378 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1510 |
| BstF5I | GGATG | 5 cut(s) | 574, 1008, 1141, 1506, 2512 |
| BstFNI | CGCG | 3 cut(s) | 232, 234, 1246 |
| BstH2I | RGCGCY | 1 cut(s) | 655 |
| BstHHI | GCGC | 4 cut(s) | 209, 234, 406, 654 |
| BstKTI | GATC | 9 cut(s) | 331, 360, 964, 1301, 1597, 1642, 1870, 2233, 2377 |
| BstMAI | GTCTC | 1 cut(s) | 600 |
| BstMBI | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| BstMCI | CGRYCG | 1 cut(s) | 159 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 152, 176, 537, 746, 884, 1088, 1205, 1436, 2492 |
| BstNI | CCWGG | 2 cut(s) | 614, 1291 |
| BstNSI | RCATGY | 4 cut(s) | 566, 595, 856, 887 |
| BstSCI | CCNGG | 6 cut(s) | 209, 351, 612, 1289, 2449, 2450 |
| BstSFI | CTRYAG | 2 cut(s) | 996, 1602 |
| BstUI | CGCG | 3 cut(s) | 232, 234, 1246 |
| BstV1I | GCAGC | 3 cut(s) | 1934, 2146, 2313 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1095 |
| BstZ17I | GTATAC | 1 cut(s) | 2337 |
| BstZI | CGGCCG | 1 cut(s) | 156 |
| Bsu36I | CCTNAGG | 2 cut(s) | 261, 554 |
| BsuRI | GGCC | 4 cut(s) | 158, 214, 1243, 1249 |
| BtgI | CCRYGG | 3 cut(s) | 1244, 1795, 2378 |
| BtgZI | GCGATG | 2 cut(s) | 759, 1671 |
| BtrI | CACGTC | 1 cut(s) | 800 |
| BtsCI | GGATG | 5 cut(s) | 574, 1008, 1141, 1506, 2512 |
| BtsI | GCAGTG | 1 cut(s) | 453 |
| BtsIMutI | CAGTG | 5 cut(s) | 327, 453, 909, 1634, 2091 |
| BveI | ACCTGC | 1 cut(s) | 268 |
| CfoI | GCGC | 4 cut(s) | 209, 234, 406, 654 |
| Cfr10I | RCCGGY | 3 cut(s) | 119, 151, 158 |
| Cfr13I | GGNCC | 7 cut(s) | 212, 1116, 1671, 1721, 2275, 2308, 2454 |
| Cfr42I | CCGCGG | 1 cut(s) | 1247 |
| Cfr9I | CCCGGG | 1 cut(s) | 2450 |
| CseI | GACGC | 1 cut(s) | 276 |
| Csp6I | GTAC | 6 cut(s) | 491, 866, 967, 1325, 1488, 1880 |
| CviQI | GTAC | 6 cut(s) | 491, 866, 967, 1325, 1488, 1880 |
| DpnI | GATC | 9 cut(s) | 330, 359, 963, 1300, 1596, 1641, 1869, 2232, 2376 |
| DpnII | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| DraI | TTTAAA | 1 cut(s) | 1012 |
| EaeI | YGGCCR | 2 cut(s) | 156, 1247 |
| EagI | CGGCCG | 1 cut(s) | 156 |
| Eam1104I | CTCTTC | 3 cut(s) | 1224, 1282, 2176 |
| EarI | CTCTTC | 3 cut(s) | 1224, 1282, 2176 |
| EciI | GGCGGA | 3 cut(s) | 51, 462, 647 |
| EclXI | CGGCCG | 1 cut(s) | 156 |
| Eco130I | CCWWGG | 7 cut(s) | 479, 680, 859, 926, 1795, 1819, 2190 |
| Eco47I | GGWCC | 6 cut(s) | 1116, 1671, 1721, 2275, 2308, 2454 |
| Eco52I | CGGCCG | 1 cut(s) | 156 |
| Eco57I | CTGAAG | 2 cut(s) | 816, 1736 |
| Eco81I | CCTNAGG | 2 cut(s) | 261, 554 |
| Eco88I | CYCGRG | 2 cut(s) | 1507, 2450 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1510 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1116, 1721, 2454 |
| EcoRI | GAATTC | 1 cut(s) | 1367 |
| EcoRII | CCWGG | 2 cut(s) | 612, 1289 |
| EcoT14I | CCWWGG | 7 cut(s) | 479, 680, 859, 926, 1795, 1819, 2190 |
| EcoT22I | ATGCAT | 2 cut(s) | 751, 1738 |
| ErhI | CCWWGG | 7 cut(s) | 479, 680, 859, 926, 1795, 1819, 2190 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1643, 1675 |
| FaqI | GGGAC | 3 cut(s) | 279, 1102, 2467 |
| FauI | CCCGC | 1 cut(s) | 533 |
| FbaI | TGATCA | 4 cut(s) | 357, 961, 1594, 1867 |
| FblI | GTMKAC | 5 cut(s) | 290, 915, 1317, 1424, 2336 |
| Fnu4HI | GCNGC | 9 cut(s) | 156, 215, 230, 560, 1244, 1247, 1948, 2135, 2327 |
| FokI | GGATG | 5 cut(s) | 581, 1015, 1148, 1513, 2519 |
| Fsp4HI | GCNGC | 9 cut(s) | 156, 215, 230, 560, 1244, 1247, 1948, 2135, 2327 |
| FspBI | CTAG | 3 cut(s) | 480, 843, 2178 |
| FspI | TGCGCA | 1 cut(s) | 405 |
| GlaI | GCGC | 4 cut(s) | 208, 233, 405, 653 |
| GluI | GCNGC | 9 cut(s) | 156, 215, 230, 560, 1244, 1247, 1948, 2135, 2327 |
| GsaI | CCCAGC | 2 cut(s) | 1091, 2486 |
| GsuI | CTGGAG | 1 cut(s) | 1023 |
| HaeII | RGCGCY | 1 cut(s) | 655 |
| HaeIII | GGCC | 4 cut(s) | 158, 214, 1243, 1249 |
| HapII | CCGG | 7 cut(s) | 120, 152, 159, 210, 352, 1271, 2451 |
| HgaI | GACGC | 1 cut(s) | 276 |
| HhaI | GCGC | 4 cut(s) | 209, 234, 406, 654 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 287 |
| Hin6I | GCGC | 4 cut(s) | 207, 232, 404, 652 |
| HinP1I | GCGC | 4 cut(s) | 207, 232, 404, 652 |
| HincII | GTYRAC | 2 cut(s) | 291, 677 |
| HindII | GTYRAC | 2 cut(s) | 291, 677 |
| HinfI | GANTC | 9 cut(s) | 974, 1103, 1274, 1403, 1565, 1706, 2012, 2045, 2111 |
| HpaII | CCGG | 7 cut(s) | 120, 152, 159, 210, 352, 1271, 2451 |
| HphI | GGTGA | 7 cut(s) | 367, 779, 1040, 1138, 1279, 1784, 2309 |
| Hpy99I | CGWCG | 3 cut(s) | 88, 110, 292 |
| HpyAV | CCTTC | 9 cut(s) | 230, 367, 587, 1019, 1272, 1289, 1300, 1640, 1711 |
| HpyCH4III | ACNGT | 6 cut(s) | 137, 226, 348, 913, 1315, 1574 |
| HpyCH4IV | ACGT | 4 cut(s) | 5, 784, 799, 2039 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 152, 176, 537, 746, 884, 1088, 1205, 1436, 2492 |
| HpySE526I | ACGT | 4 cut(s) | 5, 784, 799, 2039 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 287 |
| HspAI | GCGC | 4 cut(s) | 207, 232, 404, 652 |
| Kpn2I | TCCGGA | 1 cut(s) | 1270 |
| KroI | GCCGGC | 3 cut(s) | 119, 151, 158 |
| KroNI | GCCGGC | 3 cut(s) | 121, 153, 160 |
| Ksp22I | TGATCA | 4 cut(s) | 357, 961, 1594, 1867 |
| KspI | CCGCGG | 1 cut(s) | 1247 |
| Kzo9I | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| LguI | GCTCTTC | 1 cut(s) | 2176 |
| LmnI | GCTCC | 5 cut(s) | 190, 241, 778, 1042, 1204 |
| Lsp1109I | GCAGC | 3 cut(s) | 1934, 2146, 2313 |
| MaeI | CTAG | 3 cut(s) | 480, 843, 2178 |
| MaeII | ACGT | 4 cut(s) | 5, 784, 799, 2039 |
| MaeIII | GTNAC | 7 cut(s) | 220, 409, 845, 1309, 1562, 1677, 1692 |
| MalI | GATC | 9 cut(s) | 330, 359, 963, 1300, 1596, 1641, 1869, 2232, 2376 |
| MbiI | CCGCTC | 1 cut(s) | 217 |
| MboI | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| MfeI | CAATTG | 1 cut(s) | 2279 |
| MlyI | GAGTC | 9 cut(s) | 983, 1112, 1268, 1412, 1559, 1700, 2021, 2054, 2120 |
| MmeI | TCCRAC | 6 cut(s) | 632, 686, 1157, 2022, 2040, 2347 |
| Mph1103I | ATGCAT | 2 cut(s) | 751, 1738 |
| MroI | TCCGGA | 1 cut(s) | 1270 |
| MroNI | GCCGGC | 3 cut(s) | 119, 151, 158 |
| MroXI | GAANNNNTTC | 3 cut(s) | 576, 1630, 2411 |
| MseI | TTAA | 7 cut(s) | 1011, 1122, 1656, 1929, 2106, 2292, 2459 |
| MslI | CAYNNNNRTG | 4 cut(s) | 567, 642, 861, 2250 |
| MspA1I | CMGCKG | 2 cut(s) | 1246, 2102 |
| MspCI | CTTAAG | 1 cut(s) | 1121 |
| MspI | CCGG | 7 cut(s) | 120, 152, 159, 210, 352, 1271, 2451 |
| MspR9I | CCNGG | 6 cut(s) | 211, 353, 614, 1291, 2451, 2452 |
| MunI | CAATTG | 1 cut(s) | 2279 |
| Mva1269I | GAATGC | 4 cut(s) | 121, 578, 1630, 1962 |
| MvaI | CCWGG | 2 cut(s) | 614, 1291 |
| MvnI | CGCG | 3 cut(s) | 232, 234, 1246 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 152, 176, 537, 746, 884, 1088, 1205, 1436, 2492 |
| NaeI | GCCGGC | 3 cut(s) | 121, 153, 160 |
| NciI | CCSGG | 4 cut(s) | 211, 353, 2451, 2452 |
| NcoI | CCATGG | 1 cut(s) | 1795 |
| NdeII | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| NgoMIV | GCCGGC | 3 cut(s) | 119, 151, 158 |
| NlaIV | GGNNCC | 6 cut(s) | 901, 1118, 1260, 1722, 2310, 2455 |
| NmuCI | GTSAC | 4 cut(s) | 220, 845, 1562, 1692 |
| NsbI | TGCGCA | 1 cut(s) | 405 |
| NsiI | ATGCAT | 2 cut(s) | 751, 1738 |
| NspI | RCATGY | 4 cut(s) | 566, 595, 856, 887 |
| NspV | TTCGAA | 1 cut(s) | 1469 |
| OliI | CACNNNNGTG | 1 cut(s) | 861 |
| PaeI | GCATGC | 3 cut(s) | 566, 856, 887 |
| PaqCI | CACCTGC | 1 cut(s) | 268 |
| PciI | ACATGT | 1 cut(s) | 591 |
| PciSI | GCTCTTC | 1 cut(s) | 2176 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 17, 805 |
| PctI | GAATGC | 4 cut(s) | 121, 578, 1630, 1962 |
| PdiI | GCCGGC | 3 cut(s) | 121, 153, 160 |
| PdmI | GAANNNNTTC | 3 cut(s) | 576, 1630, 2411 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 619, 2059 |
| PkrI | GCNGC | 9 cut(s) | 157, 216, 231, 561, 1245, 1248, 1949, 2136, 2328 |
| PleI | GAGTC | 9 cut(s) | 982, 1111, 1268, 1411, 1559, 1700, 2020, 2053, 2119 |
| PpsI | GAGTC | 9 cut(s) | 982, 1111, 1268, 1411, 1559, 1700, 2020, 2053, 2119 |
| Ppu21I | YACGTR | 1 cut(s) | 785 |
| PpuMI | RGGWCCY | 3 cut(s) | 1116, 1721, 2454 |
| PscI | ACATGT | 1 cut(s) | 591 |
| Psp5II | RGGWCCY | 3 cut(s) | 1116, 1721, 2454 |
| Psp6I | CCWGG | 2 cut(s) | 612, 1289 |
| PspFI | CCCAGC | 2 cut(s) | 1087, 2482 |
| PspGI | CCWGG | 2 cut(s) | 612, 1289 |
| PspN4I | GGNNCC | 6 cut(s) | 901, 1118, 1260, 1722, 2310, 2455 |
| PspPI | GGNCC | 7 cut(s) | 212, 1116, 1671, 1721, 2275, 2308, 2454 |
| PspPPI | RGGWCCY | 3 cut(s) | 1116, 1721, 2454 |
| PvuII | CAGCTG | 1 cut(s) | 2102 |
| RsaI | GTAC | 6 cut(s) | 492, 867, 968, 1326, 1489, 1881 |
| RsaNI | GTAC | 6 cut(s) | 491, 866, 967, 1325, 1488, 1880 |
| RseI | CAYNNNNRTG | 4 cut(s) | 567, 642, 861, 2250 |
| SacII | CCGCGG | 1 cut(s) | 1247 |
| SalI | GTCGAC | 1 cut(s) | 289 |
| SapI | GCTCTTC | 1 cut(s) | 2176 |
| SaqAI | TTAA | 7 cut(s) | 1011, 1122, 1656, 1929, 2106, 2292, 2459 |
| SatI | GCNGC | 9 cut(s) | 156, 215, 230, 560, 1244, 1247, 1948, 2135, 2327 |
| Sau3AI | GATC | 9 cut(s) | 328, 357, 961, 1298, 1594, 1639, 1867, 2230, 2374 |
| Sau96I | GGNCC | 7 cut(s) | 212, 1116, 1671, 1721, 2275, 2308, 2454 |
| SchI | GAGTC | 9 cut(s) | 983, 1112, 1268, 1412, 1559, 1700, 2021, 2054, 2120 |
| ScrFI | CCNGG | 6 cut(s) | 211, 353, 614, 1291, 2451, 2452 |
| SfcI | CTRYAG | 2 cut(s) | 996, 1602 |
| Sfr303I | CCGCGG | 1 cut(s) | 1247 |
| SfuI | TTCGAA | 1 cut(s) | 1469 |
| SgrBI | CCGCGG | 1 cut(s) | 1247 |
| SinI | GGWCC | 6 cut(s) | 1116, 1671, 1721, 2275, 2308, 2454 |
| SmaI | CCCGGG | 1 cut(s) | 2452 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 567, 642, 861, 2250 |
| SmlI | CTYRAG | 2 cut(s) | 1121, 1660 |
| SmoI | CTYRAG | 2 cut(s) | 1121, 1660 |
| SphI | GCATGC | 3 cut(s) | 566, 856, 887 |
| SspMI | CTAG | 3 cut(s) | 480, 843, 2178 |
| StyD4I | CCNGG | 6 cut(s) | 209, 351, 612, 1289, 2449, 2450 |
| StyI | CCWWGG | 7 cut(s) | 479, 680, 859, 926, 1795, 1819, 2190 |
| TaaI | ACNGT | 6 cut(s) | 137, 226, 348, 913, 1315, 1574 |
| TaiI | ACGT | 4 cut(s) | 8, 787, 802, 2042 |
| TaqI | TCGA | 7 cut(s) | 20, 86, 273, 290, 1373, 1457, 1469 |
| TatI | WGTACW | 4 cut(s) | 490, 865, 966, 1324 |
| TauI | GCSGC | 6 cut(s) | 158, 217, 232, 562, 1246, 1249 |
| Tru1I | TTAA | 7 cut(s) | 1011, 1122, 1656, 1929, 2106, 2292, 2459 |
| Tru9I | TTAA | 7 cut(s) | 1011, 1122, 1656, 1929, 2106, 2292, 2459 |
| TscAI | CASTG | 5 cut(s) | 327, 453, 916, 1641, 2091 |
| TseFI | GTSAC | 4 cut(s) | 220, 845, 1562, 1692 |
| TseI | GCWGC | 3 cut(s) | 1947, 2134, 2326 |
| Tsp45I | GTSAC | 4 cut(s) | 220, 845, 1562, 1692 |
| TspGWI | ACGGA | 2 cut(s) | 203, 2367 |
| TspMI | CCCGGG | 1 cut(s) | 2450 |
| TspRI | CASTG | 5 cut(s) | 327, 453, 916, 1641, 2091 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 619, 2059 |
| Vha464I | CTTAAG | 1 cut(s) | 1121 |
| VpaK11BI | GGWCC | 6 cut(s) | 1116, 1671, 1721, 2275, 2308, 2454 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1510 |
| XapI | RAATTY | 5 cut(s) | 1141, 1367, 2124, 2288, 2387 |
| XceI | RCATGY | 4 cut(s) | 566, 595, 856, 887 |
| XmaI | CCCGGG | 1 cut(s) | 2450 |
| XmaJI | CCTAGG | 1 cut(s) | 479 |
| XmiI | GTMKAC | 5 cut(s) | 290, 915, 1317, 1424, 2336 |
| XmnI | GAANNNNTTC | 3 cut(s) | 576, 1630, 2411 |
| XspI | CTAG | 3 cut(s) | 480, 843, 2178 |
| ZraI | GACGTC | 1 cut(s) | 6 |
| Zsp2I | ATGCAT | 2 cut(s) | 751, 1738 |