Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62000 AT5G62000 AT5G62000 AT5G62000 AT5G62000 |
| fragaria_vesca | FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 FvH4_5g09310 |
| malus_domestica | MD06G1132100.v1.1 MD14G1148500.v1.1 |
| prunus_persica | Prupe.5G143100_v2.0.a1 Prupe.5G143100_v2.0.a1 Prupe.5G143100_v2.0.a1 |
| pyrus_communis | pycom06g12370 pycom14g12320 pycom14g12330 |
| rosa_chinensis | RchiOBHm_Chr7g0188911 |
| rosa_laevigata | RLG00000004652 |
| rosa_multiflora | Rmu_co8328567.1_g000001 Rmu_ssc0000411.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00265950 |
| rosa_rugosa | Rorug06G0494400 Rorug06G0494500 |
| rosa_samantha | Rh7AG099400 Rh7BG101500 Rh7CG102800 Rh7DG101200 |
| rosa_wichuraiana | Rw7G008560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 253, 1198 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2455 |
| AatII | GACGTC | 1 cut(s) | 8 |
| Acc16I | TGCGCA | 1 cut(s) | 390 |
| Acc36I | ACCTGC | 2 cut(s) | 253, 1198 |
| AccB1I | GGYRCC | 1 cut(s) | 1043 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 604, 2053 |
| AccBSI | CCGCTC | 1 cut(s) | 202 |
| AccI | GTMKAC | 4 cut(s) | 275, 900, 1302, 1409 |
| AccII | CGCG | 3 cut(s) | 107, 217, 1231 |
| AccIII | TCCGGA | 1 cut(s) | 2397 |
| AclWI | GGATC | 3 cut(s) | 1291, 1644, 2363 |
| AcoI | YGGCCR | 2 cut(s) | 141, 1418 |
| AcsI | RAATTY | 5 cut(s) | 1126, 1352, 1660, 2282, 2381 |
| AcuI | CTGAAG | 1 cut(s) | 801 |
| AcyI | GRCGYC | 2 cut(s) | 5, 272 |
| AfaI | GTAC | 5 cut(s) | 477, 953, 1311, 1549, 1905 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 111, 143, 195, 221, 604, 1240, 1934, 2053, 2492 |
| AflII | CTTAAG | 1 cut(s) | 1106 |
| AflIII | ACRYGT | 1 cut(s) | 576 |
| AjiI | CACGTC | 1 cut(s) | 785 |
| AjnI | CCWGG | 2 cut(s) | 597, 1993 |
| AleI | CACNNNNGTG | 1 cut(s) | 846 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 110, 142, 519, 551 |
| Alw21I | GWGCWC | 2 cut(s) | 518, 768 |
| Alw26I | GTCTC | 3 cut(s) | 585, 1501, 1984 |
| AlwI | GGATC | 3 cut(s) | 1291, 1644, 2363 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1457 |
| Ama87I | CYCGRG | 1 cut(s) | 2444 |
| Aor13HI | TCCGGA | 1 cut(s) | 2397 |
| AoxI | GGCC | 5 cut(s) | 141, 197, 1226, 1418, 2301 |
| ApeKI | GCWGC | 2 cut(s) | 1941, 2128 |
| ApoI | RAATTY | 5 cut(s) | 1126, 1352, 1660, 2282, 2381 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2261, 2293 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 561, 1627 |
| AspLEI | GCGC | 4 cut(s) | 194, 391, 639, 1233 |
| AspS9I | GGNCC | 6 cut(s) | 197, 1101, 1668, 2269, 2302, 2448 |
| AsuC2I | CCSGG | 5 cut(s) | 137, 196, 923, 2445, 2446 |
| AsuHPI | GGTGA | 7 cut(s) | 352, 764, 1025, 1123, 1568, 2303, 2357 |
| AsuII | TTCGAA | 1 cut(s) | 1008 |
| AvaI | CYCGRG | 1 cut(s) | 2444 |
| AvaII | GGWCC | 4 cut(s) | 1101, 1668, 2269, 2448 |
| AxyI | CCTNAGG | 2 cut(s) | 246, 1501 |
| BanI | GGYRCC | 1 cut(s) | 1043 |
| BanII | GRGCYC | 1 cut(s) | 768 |
| BauI | CACGAG | 3 cut(s) | 203, 511, 2416 |
| Bbv12I | GWGCWC | 2 cut(s) | 518, 768 |
| BbvCI | CCTCAGC | 1 cut(s) | 2490 |
| BbvI | GCAGC | 2 cut(s) | 1928, 2140 |
| BccI | CCATC | 4 cut(s) | 820, 1110, 1855, 1928 |
| BceAI | ACGGC | 1 cut(s) | 106 |
| BciT130I | CCWGG | 2 cut(s) | 599, 1995 |
| BclI | TGATCA | 3 cut(s) | 342, 946, 1591 |
| BcnI | CCSGG | 5 cut(s) | 137, 196, 923, 2445, 2446 |
| BcoDI | GTCTC | 3 cut(s) | 585, 1501, 1984 |
| BfaI | CTAG | 2 cut(s) | 828, 2172 |
| BfmI | CTRYAG | 1 cut(s) | 981 |
| BfoI | RGCGCY | 1 cut(s) | 640 |
| BfrI | CTTAAG | 1 cut(s) | 1106 |
| BfuAI | ACCTGC | 2 cut(s) | 253, 1198 |
| BisI | GCNGC | 9 cut(s) | 105, 141, 200, 215, 461, 545, 1229, 1942, 2129 |
| BlpI | GCTNAGC | 1 cut(s) | 363 |
| BlsI | GCNGC | 9 cut(s) | 106, 142, 201, 216, 462, 546, 1230, 1943, 2130 |
| BmcAI | AGTACT | 1 cut(s) | 1905 |
| Bme1390I | CCNGG | 7 cut(s) | 137, 196, 599, 923, 1995, 2445, 2446 |
| Bme18I | GGWCC | 4 cut(s) | 1101, 1668, 2269, 2448 |
| BmeT110I | CYCGRG | 1 cut(s) | 2444 |
| BmgBI | CACGTC | 1 cut(s) | 785 |
| BmgT120I | GGNCC | 6 cut(s) | 197, 1101, 1668, 2269, 2302, 2448 |
| BmiI | GGNNCC | 9 cut(s) | 444, 886, 1045, 1103, 1245, 1477, 1719, 2304, 2449 |
| BmrFI | CCNGG | 7 cut(s) | 137, 196, 599, 923, 1995, 2445, 2446 |
| BmrI | ACTGGG | 1 cut(s) | 2471 |
| BmuI | ACTGGG | 1 cut(s) | 2471 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2074 |
| BpmI | CTGGAG | 2 cut(s) | 1008, 1239 |
| Bpu10I | CCTNAGC | 2 cut(s) | 408, 2490 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 363 |
| Bpu14I | TTCGAA | 1 cut(s) | 1008 |
| BpuEI | CTTGAG | 1 cut(s) | 402 |
| BpuMI | CCSGG | 5 cut(s) | 137, 196, 923, 2445, 2446 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2408 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 272 |
| BsaI | GGTCTC | 1 cut(s) | 1984 |
| BsaWI | WCCGGW | 1 cut(s) | 2397 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1373, 1403 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 111, 143, 195, 221, 604, 1240, 1934, 2053, 2492 |
| Bse118I | RCCGGY | 2 cut(s) | 143, 1420 |
| Bse1I | ACTGG | 8 cut(s) | 305, 576, 1045, 1479, 1496, 1638, 1901, 2466 |
| Bse21I | CCTNAGG | 2 cut(s) | 246, 1501 |
| Bse3DI | GCAATG | 4 cut(s) | 795, 811, 1735, 2487 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2408 |
| BseAI | TCCGGA | 1 cut(s) | 2397 |
| BseBI | CCWGG | 2 cut(s) | 599, 1995 |
| BseGI | GGATG | 7 cut(s) | 559, 736, 993, 1126, 1500, 1833, 2506 |
| BseJI | GATNNNNATC | 1 cut(s) | 2408 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 111, 143, 195, 221, 604, 1240, 1934, 2053, 2492 |
| BseMI | GCAATG | 4 cut(s) | 795, 811, 1735, 2487 |
| BseMII | CTCAG | 9 cut(s) | 260, 354, 399, 519, 918, 1515, 1551, 2138, 2481 |
| BseNI | ACTGG | 8 cut(s) | 305, 576, 1045, 1479, 1496, 1638, 1901, 2466 |
| BseRI | GAGGAG | 4 cut(s) | 63, 66, 2438, 2483 |
| BseX3I | CGGCCG | 1 cut(s) | 141 |
| BseXI | GCAGC | 2 cut(s) | 1928, 2140 |
| BseYI | CCCAGC | 1 cut(s) | 2476 |
| BsgI | GTGCAG | 3 cut(s) | 147, 1176, 1503 |
| Bsh1236I | CGCG | 3 cut(s) | 107, 217, 1231 |
| Bsh1285I | CGRYCG | 1 cut(s) | 144 |
| BshFI | GGCC | 5 cut(s) | 143, 199, 1228, 1420, 2303 |
| BshNI | GGYRCC | 1 cut(s) | 1043 |
| BsiEI | CGRYCG | 1 cut(s) | 144 |
| BsiHKAI | GWGCWC | 2 cut(s) | 518, 768 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2444 |
| BsiSI | CCGG | 7 cut(s) | 137, 144, 195, 923, 1421, 2398, 2445 |
| BslFI | GGGAC | 5 cut(s) | 119, 264, 1087, 2082, 2461 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 111, 143, 195, 221, 604, 1240, 1934, 2053, 2492 |
| BsmAI | GTCTC | 3 cut(s) | 585, 1501, 1984 |
| BsmFI | GGGAC | 5 cut(s) | 119, 264, 1087, 2082, 2461 |
| BsmI | GAATGC | 5 cut(s) | 433, 563, 1627, 1876, 1956 |
| BsnI | GGCC | 5 cut(s) | 143, 199, 1228, 1420, 2303 |
| Bso31I | GGTCTC | 1 cut(s) | 1984 |
| BsoBI | CYCGRG | 1 cut(s) | 2444 |
| Bsp119I | TTCGAA | 1 cut(s) | 1008 |
| Bsp1286I | GDGCHC | 2 cut(s) | 518, 768 |
| Bsp13I | TCCGGA | 1 cut(s) | 2397 |
| Bsp143I | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 363 |
| Bsp19I | CCATGG | 1 cut(s) | 2372 |
| BspANI | GGCC | 5 cut(s) | 143, 199, 1228, 1420, 2303 |
| BspCNI | CTCAG | 9 cut(s) | 259, 355, 400, 518, 919, 1514, 1550, 2137, 2482 |
| BspEI | TCCGGA | 1 cut(s) | 2397 |
| BspFNI | CGCG | 3 cut(s) | 107, 217, 1231 |
| BspLI | GGNNCC | 9 cut(s) | 444, 886, 1045, 1103, 1245, 1477, 1719, 2304, 2449 |
| BspMI | ACCTGC | 2 cut(s) | 253, 1198 |
| BspPI | GGATC | 3 cut(s) | 1291, 1644, 2363 |
| BspQI | GCTCTTC | 1 cut(s) | 2170 |
| BspT104I | TTCGAA | 1 cut(s) | 1008 |
| BspT107I | GGYRCC | 1 cut(s) | 1043 |
| BspTI | CTTAAG | 1 cut(s) | 1106 |
| BspTNI | GGTCTC | 1 cut(s) | 1984 |
| BsrBI | CCGCTC | 1 cut(s) | 202 |
| BsrDI | GCAATG | 4 cut(s) | 795, 811, 1735, 2487 |
| BsrFI | RCCGGY | 2 cut(s) | 143, 1420 |
| BsrI | ACTGG | 8 cut(s) | 305, 576, 1045, 1479, 1496, 1638, 1901, 2466 |
| BssAI | RCCGGY | 2 cut(s) | 143, 1420 |
| BssMI | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| BssNI | GRCGYC | 2 cut(s) | 5, 272 |
| BssSI | CACGAG | 3 cut(s) | 203, 511, 2416 |
| BssT1I | CCWWGG | 5 cut(s) | 665, 844, 911, 2034, 2372 |
| Bst2BI | CACGAG | 3 cut(s) | 203, 511, 2416 |
| Bst2UI | CCWGG | 2 cut(s) | 599, 1995 |
| Bst4CI | ACNGT | 5 cut(s) | 122, 133, 211, 898, 1300 |
| Bst6I | CTCTTC | 4 cut(s) | 1209, 1255, 1267, 2170 |
| BstACI | GRCGYC | 2 cut(s) | 5, 272 |
| BstAFI | CTTAAG | 1 cut(s) | 1106 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 731, 869, 2486 |
| BstBI | TTCGAA | 1 cut(s) | 1008 |
| BstDSI | CCRYGG | 2 cut(s) | 105, 2372 |
| BstF5I | GGATG | 7 cut(s) | 559, 736, 993, 1126, 1500, 1833, 2506 |
| BstFNI | CGCG | 3 cut(s) | 107, 217, 1231 |
| BstH2I | RGCGCY | 1 cut(s) | 640 |
| BstHHI | GCGC | 4 cut(s) | 194, 391, 639, 1233 |
| BstKTI | GATC | 8 cut(s) | 345, 949, 1286, 1594, 1639, 1780, 2227, 2371 |
| BstMAI | GTCTC | 3 cut(s) | 585, 1501, 1984 |
| BstMBI | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| BstMCI | CGRYCG | 1 cut(s) | 144 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 161, 731, 869, 1190, 1421, 2486 |
| BstNI | CCWGG | 2 cut(s) | 599, 1995 |
| BstNSI | RCATGY | 5 cut(s) | 551, 580, 841, 872, 2135 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2074 |
| BstSCI | CCNGG | 7 cut(s) | 135, 194, 597, 921, 1993, 2443, 2444 |
| BstSFI | CTRYAG | 1 cut(s) | 981 |
| BstUI | CGCG | 3 cut(s) | 107, 217, 1231 |
| BstV1I | GCAGC | 2 cut(s) | 1928, 2140 |
| BstZI | CGGCCG | 1 cut(s) | 141 |
| Bsu36I | CCTNAGG | 2 cut(s) | 246, 1501 |
| BsuRI | GGCC | 5 cut(s) | 143, 199, 1228, 1420, 2303 |
| BtgI | CCRYGG | 2 cut(s) | 105, 2372 |
| BtgZI | GCGATG | 1 cut(s) | 1668 |
| BtrI | CACGTC | 1 cut(s) | 785 |
| BtsCI | GGATG | 7 cut(s) | 559, 736, 993, 1126, 1500, 1833, 2506 |
| BtsI | GCAGTG | 2 cut(s) | 438, 1458 |
| BtsIMutI | CAGTG | 8 cut(s) | 129, 312, 438, 894, 1458, 1486, 1631, 2459 |
| BveI | ACCTGC | 2 cut(s) | 253, 1198 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1457 |
| CfoI | GCGC | 4 cut(s) | 194, 391, 639, 1233 |
| Cfr10I | RCCGGY | 2 cut(s) | 143, 1420 |
| Cfr13I | GGNCC | 6 cut(s) | 197, 1101, 1668, 2269, 2302, 2448 |
| Cfr42I | CCGCGG | 1 cut(s) | 108 |
| Cfr9I | CCCGGG | 1 cut(s) | 2444 |
| CseI | GACGC | 1 cut(s) | 261 |
| Csp6I | GTAC | 5 cut(s) | 476, 952, 1310, 1548, 1904 |
| CviQI | GTAC | 5 cut(s) | 476, 952, 1310, 1548, 1904 |
| DpnI | GATC | 8 cut(s) | 344, 948, 1285, 1593, 1638, 1779, 2226, 2370 |
| DpnII | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2455 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2455 |
| EaeI | YGGCCR | 2 cut(s) | 141, 1418 |
| EagI | CGGCCG | 1 cut(s) | 141 |
| Eam1104I | CTCTTC | 4 cut(s) | 1209, 1255, 1267, 2170 |
| EarI | CTCTTC | 4 cut(s) | 1209, 1255, 1267, 2170 |
| EciI | GGCGGA | 1 cut(s) | 447 |
| Ecl136II | GAGCTC | 1 cut(s) | 766 |
| EclXI | CGGCCG | 1 cut(s) | 141 |
| Eco130I | CCWWGG | 5 cut(s) | 665, 844, 911, 2034, 2372 |
| Eco24I | GRGCYC | 1 cut(s) | 768 |
| Eco31I | GGTCTC | 1 cut(s) | 1984 |
| Eco47I | GGWCC | 4 cut(s) | 1101, 1668, 2269, 2448 |
| Eco52I | CGGCCG | 1 cut(s) | 141 |
| Eco53kI | GAGCTC | 1 cut(s) | 766 |
| Eco57I | CTGAAG | 1 cut(s) | 801 |
| Eco81I | CCTNAGG | 2 cut(s) | 246, 1501 |
| Eco88I | CYCGRG | 1 cut(s) | 2444 |
| EcoICRI | GAGCTC | 1 cut(s) | 766 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1101, 2448 |
| EcoRI | GAATTC | 2 cut(s) | 1352, 1660 |
| EcoRII | CCWGG | 2 cut(s) | 597, 1993 |
| EcoT14I | CCWWGG | 5 cut(s) | 665, 844, 911, 2034, 2372 |
| EcoT22I | ATGCAT | 2 cut(s) | 736, 1735 |
| EcoT38I | GRGCYC | 1 cut(s) | 768 |
| ErhI | CCWWGG | 5 cut(s) | 665, 844, 911, 2034, 2372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1640, 1672 |
| FaqI | GGGAC | 5 cut(s) | 119, 264, 1087, 2082, 2461 |
| FauNDI | CATATG | 1 cut(s) | 1896 |
| FbaI | TGATCA | 3 cut(s) | 342, 946, 1591 |
| FblI | GTMKAC | 4 cut(s) | 275, 900, 1302, 1409 |
| Fnu4HI | GCNGC | 9 cut(s) | 105, 141, 200, 215, 461, 545, 1229, 1942, 2129 |
| FokI | GGATG | 7 cut(s) | 566, 743, 1000, 1133, 1507, 1840, 2513 |
| FriOI | GRGCYC | 1 cut(s) | 768 |
| Fsp4HI | GCNGC | 9 cut(s) | 105, 141, 200, 215, 461, 545, 1229, 1942, 2129 |
| FspBI | CTAG | 2 cut(s) | 828, 2172 |
| FspI | TGCGCA | 1 cut(s) | 390 |
| GlaI | GCGC | 4 cut(s) | 193, 390, 638, 1232 |
| GluI | GCNGC | 9 cut(s) | 105, 141, 200, 215, 461, 545, 1229, 1942, 2129 |
| GsaI | CCCAGC | 1 cut(s) | 2480 |
| GsuI | CTGGAG | 2 cut(s) | 1008, 1239 |
| HaeII | RGCGCY | 1 cut(s) | 640 |
| HaeIII | GGCC | 5 cut(s) | 143, 199, 1228, 1420, 2303 |
| HapII | CCGG | 7 cut(s) | 137, 144, 195, 923, 1421, 2398, 2445 |
| HgaI | GACGC | 1 cut(s) | 261 |
| HhaI | GCGC | 4 cut(s) | 194, 391, 639, 1233 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 272 |
| Hin6I | GCGC | 4 cut(s) | 192, 389, 637, 1231 |
| HinP1I | GCGC | 4 cut(s) | 192, 389, 637, 1231 |
| HincII | GTYRAC | 3 cut(s) | 276, 662, 1789 |
| HindII | GTYRAC | 3 cut(s) | 276, 662, 1789 |
| HinfI | GANTC | 9 cut(s) | 959, 1088, 1259, 1388, 1703, 1861, 2006, 2039, 2105 |
| HpaI | GTTAAC | 1 cut(s) | 1789 |
| HpaII | CCGG | 7 cut(s) | 137, 144, 195, 923, 1421, 2398, 2445 |
| HphI | GGTGA | 7 cut(s) | 352, 764, 1025, 1123, 1568, 2303, 2357 |
| Hpy188I | TCNGA | 9 cut(s) | 13, 508, 644, 656, 1393, 1713, 2044, 2110, 2433 |
| Hpy99I | CGWCG | 2 cut(s) | 92, 277 |
| HpyAV | CCTTC | 8 cut(s) | 215, 352, 433, 572, 1004, 1274, 1637, 1708 |
| HpyCH4III | ACNGT | 5 cut(s) | 122, 133, 211, 898, 1300 |
| HpyCH4IV | ACGT | 3 cut(s) | 5, 784, 2456 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 161, 731, 869, 1190, 1421, 2486 |
| HpySE526I | ACGT | 3 cut(s) | 5, 784, 2456 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 272 |
| HspAI | GCGC | 4 cut(s) | 192, 389, 637, 1231 |
| Kpn2I | TCCGGA | 1 cut(s) | 2397 |
| KroI | GCCGGC | 2 cut(s) | 143, 1420 |
| KroNI | GCCGGC | 2 cut(s) | 145, 1422 |
| Ksp22I | TGATCA | 3 cut(s) | 342, 946, 1591 |
| KspAI | GTTAAC | 1 cut(s) | 1789 |
| KspI | CCGCGG | 1 cut(s) | 108 |
| Kzo9I | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| LguI | GCTCTTC | 1 cut(s) | 2170 |
| LmnI | GCTCC | 7 cut(s) | 175, 226, 713, 763, 771, 1027, 1189 |
| Lsp1109I | GCAGC | 2 cut(s) | 1928, 2140 |
| MaeI | CTAG | 2 cut(s) | 828, 2172 |
| MaeII | ACGT | 3 cut(s) | 5, 784, 2456 |
| MaeIII | GTNAC | 8 cut(s) | 205, 394, 830, 1294, 1674, 1689, 2345, 2457 |
| MalI | GATC | 8 cut(s) | 344, 948, 1285, 1593, 1638, 1779, 2226, 2370 |
| MbiI | CCGCTC | 1 cut(s) | 202 |
| MboI | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| MfeI | CAATTG | 1 cut(s) | 2273 |
| MhlI | GDGCHC | 2 cut(s) | 518, 768 |
| MlyI | GAGTC | 7 cut(s) | 968, 1253, 1397, 1697, 1870, 2048, 2114 |
| MmeI | TCCRAC | 5 cut(s) | 617, 667, 671, 2034, 2341 |
| Mph1103I | ATGCAT | 2 cut(s) | 736, 1735 |
| MroI | TCCGGA | 1 cut(s) | 2397 |
| MroNI | GCCGGC | 2 cut(s) | 143, 1420 |
| MroXI | GAANNNNTTC | 2 cut(s) | 561, 1627 |
| MseI | TTAA | 8 cut(s) | 497, 996, 1107, 1653, 1788, 1923, 2100, 2453 |
| MslI | CAYNNNNRTG | 3 cut(s) | 552, 627, 846 |
| MspA1I | CMGCKG | 2 cut(s) | 107, 1400 |
| MspCI | CTTAAG | 1 cut(s) | 1106 |
| MspI | CCGG | 7 cut(s) | 137, 144, 195, 923, 1421, 2398, 2445 |
| MspR9I | CCNGG | 7 cut(s) | 137, 196, 599, 923, 1995, 2445, 2446 |
| MunI | CAATTG | 1 cut(s) | 2273 |
| Mva1269I | GAATGC | 5 cut(s) | 433, 563, 1627, 1876, 1956 |
| MvaI | CCWGG | 2 cut(s) | 599, 1995 |
| MvnI | CGCG | 3 cut(s) | 107, 217, 1231 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 161, 731, 869, 1190, 1421, 2486 |
| NaeI | GCCGGC | 2 cut(s) | 145, 1422 |
| NciI | CCSGG | 5 cut(s) | 137, 196, 923, 2445, 2446 |
| NcoI | CCATGG | 1 cut(s) | 2372 |
| NdeI | CATATG | 1 cut(s) | 1896 |
| NdeII | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| NgoMIV | GCCGGC | 2 cut(s) | 143, 1420 |
| NlaIV | GGNNCC | 9 cut(s) | 444, 886, 1045, 1103, 1245, 1477, 1719, 2304, 2449 |
| NmuCI | GTSAC | 6 cut(s) | 205, 394, 830, 1689, 2345, 2457 |
| NsbI | TGCGCA | 1 cut(s) | 390 |
| NsiI | ATGCAT | 2 cut(s) | 736, 1735 |
| NspI | RCATGY | 5 cut(s) | 551, 580, 841, 872, 2135 |
| NspV | TTCGAA | 1 cut(s) | 1008 |
| OliI | CACNNNNGTG | 1 cut(s) | 846 |
| PaeI | GCATGC | 4 cut(s) | 551, 841, 872, 2135 |
| PaqCI | CACCTGC | 2 cut(s) | 253, 1198 |
| PciI | ACATGT | 1 cut(s) | 576 |
| PciSI | GCTCTTC | 1 cut(s) | 2170 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 17, 790 |
| PctI | GAATGC | 5 cut(s) | 433, 563, 1627, 1876, 1956 |
| PdiI | GCCGGC | 2 cut(s) | 145, 1422 |
| PdmI | GAANNNNTTC | 2 cut(s) | 561, 1627 |
| PfeI | GAWTC | 2 cut(s) | 1088, 2006 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 604, 2053 |
| PkrI | GCNGC | 9 cut(s) | 106, 142, 201, 216, 462, 546, 1230, 1943, 2130 |
| PleI | GAGTC | 7 cut(s) | 967, 1253, 1396, 1697, 1869, 2047, 2113 |
| PpsI | GAGTC | 7 cut(s) | 967, 1253, 1396, 1697, 1869, 2047, 2113 |
| PpuMI | RGGWCCY | 2 cut(s) | 1101, 2448 |
| PscI | ACATGT | 1 cut(s) | 576 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2074 |
| Psp124BI | GAGCTC | 1 cut(s) | 768 |
| Psp5II | RGGWCCY | 2 cut(s) | 1101, 2448 |
| Psp6I | CCWGG | 2 cut(s) | 597, 1993 |
| PspFI | CCCAGC | 1 cut(s) | 2476 |
| PspGI | CCWGG | 2 cut(s) | 597, 1993 |
| PspN4I | GGNNCC | 9 cut(s) | 444, 886, 1045, 1103, 1245, 1477, 1719, 2304, 2449 |
| PspPI | GGNCC | 6 cut(s) | 197, 1101, 1668, 2269, 2302, 2448 |
| PspPPI | RGGWCCY | 2 cut(s) | 1101, 2448 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1457 |
| PvuII | CAGCTG | 1 cut(s) | 1400 |
| RsaI | GTAC | 5 cut(s) | 477, 953, 1311, 1549, 1905 |
| RsaNI | GTAC | 5 cut(s) | 476, 952, 1310, 1548, 1904 |
| RseI | CAYNNNNRTG | 3 cut(s) | 552, 627, 846 |
| SacI | GAGCTC | 1 cut(s) | 768 |
| SacII | CCGCGG | 1 cut(s) | 108 |
| SalI | GTCGAC | 1 cut(s) | 274 |
| SapI | GCTCTTC | 1 cut(s) | 2170 |
| SaqAI | TTAA | 8 cut(s) | 497, 996, 1107, 1653, 1788, 1923, 2100, 2453 |
| SatI | GCNGC | 9 cut(s) | 105, 141, 200, 215, 461, 545, 1229, 1942, 2129 |
| Sau3AI | GATC | 8 cut(s) | 342, 946, 1283, 1591, 1636, 1777, 2224, 2368 |
| Sau96I | GGNCC | 6 cut(s) | 197, 1101, 1668, 2269, 2302, 2448 |
| ScaI | AGTACT | 1 cut(s) | 1905 |
| SchI | GAGTC | 7 cut(s) | 968, 1253, 1397, 1697, 1870, 2048, 2114 |
| ScrFI | CCNGG | 7 cut(s) | 137, 196, 599, 923, 1995, 2445, 2446 |
| SduI | GDGCHC | 2 cut(s) | 518, 768 |
| SfcI | CTRYAG | 1 cut(s) | 981 |
| Sfr303I | CCGCGG | 1 cut(s) | 108 |
| SfuI | TTCGAA | 1 cut(s) | 1008 |
| SgrBI | CCGCGG | 1 cut(s) | 108 |
| SinI | GGWCC | 4 cut(s) | 1101, 1668, 2269, 2448 |
| SmaI | CCCGGG | 1 cut(s) | 2446 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 552, 627, 846 |
| SmlI | CTYRAG | 2 cut(s) | 417, 1106 |
| SmoI | CTYRAG | 2 cut(s) | 417, 1106 |
| SphI | GCATGC | 4 cut(s) | 551, 841, 872, 2135 |
| SspMI | CTAG | 2 cut(s) | 828, 2172 |
| SstI | GAGCTC | 1 cut(s) | 768 |
| StyD4I | CCNGG | 7 cut(s) | 135, 194, 597, 921, 1993, 2443, 2444 |
| StyI | CCWWGG | 5 cut(s) | 665, 844, 911, 2034, 2372 |
| TaaI | ACNGT | 5 cut(s) | 122, 133, 211, 898, 1300 |
| TaiI | ACGT | 3 cut(s) | 8, 787, 2459 |
| TaqI | TCGA | 5 cut(s) | 20, 258, 275, 1008, 1358 |
| TatI | WGTACW | 4 cut(s) | 475, 951, 1309, 1903 |
| TauI | GCSGC | 7 cut(s) | 107, 143, 202, 217, 463, 547, 1231 |
| TfiI | GAWTC | 2 cut(s) | 1088, 2006 |
| Tru1I | TTAA | 8 cut(s) | 497, 996, 1107, 1653, 1788, 1923, 2100, 2453 |
| Tru9I | TTAA | 8 cut(s) | 497, 996, 1107, 1653, 1788, 1923, 2100, 2453 |
| TscAI | CASTG | 8 cut(s) | 136, 312, 438, 901, 1458, 1486, 1638, 2466 |
| TseFI | GTSAC | 6 cut(s) | 205, 394, 830, 1689, 2345, 2457 |
| TseI | GCWGC | 2 cut(s) | 1941, 2128 |
| Tsp45I | GTSAC | 6 cut(s) | 205, 394, 830, 1689, 2345, 2457 |
| TspGWI | ACGGA | 3 cut(s) | 48, 188, 758 |
| TspMI | CCCGGG | 1 cut(s) | 2444 |
| TspRI | CASTG | 8 cut(s) | 136, 312, 438, 901, 1458, 1486, 1638, 2466 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 604, 2053 |
| Vha464I | CTTAAG | 1 cut(s) | 1106 |
| VpaK11BI | GGWCC | 4 cut(s) | 1101, 1668, 2269, 2448 |
| XapI | RAATTY | 5 cut(s) | 1126, 1352, 1660, 2282, 2381 |
| XceI | RCATGY | 5 cut(s) | 551, 580, 841, 872, 2135 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2313 |
| XmaI | CCCGGG | 1 cut(s) | 2444 |
| XmiI | GTMKAC | 4 cut(s) | 275, 900, 1302, 1409 |
| XmnI | GAANNNNTTC | 2 cut(s) | 561, 1627 |
| XspI | CTAG | 2 cut(s) | 828, 2172 |
| ZraI | GACGTC | 1 cut(s) | 6 |
| ZrmI | AGTACT | 1 cut(s) | 1905 |
| Zsp2I | ATGCAT | 2 cut(s) | 736, 1735 |