proton-dependent oligopeptide transport (POT) family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18880 AT3G47960 AT5G62680 |
| fragaria_vesca | FvH4_5g15612 FvH4_5g15612 FvH4_5g15612 FvH4_5g15620 FvH4_5g15620 FvH4_5g15620 FvH4_5g15620 FvH4_5g15620 FvH4_5g15670 FvH4_5g15671 FvH4_5g15671 FvH4_5g15671 FvH4_5g15671 |
| malus_domestica | MD06G1186500.v1.1 MD06G1186600.v1.1 MD06G1186700.v1.1 MD14G1192700.v1.1 MD14G1192800.v1.1 MD14G1193100.v1.1 |
| prunus_persica | Prupe.5G185100_v2.0.a1 Prupe.5G185100_v2.0.a1 Prupe.5G185100_v2.0.a1 Prupe.5G185200_v2.0.a1 |
| pyrus_communis | pycom06g16580 pycom14g16040 |
| rosa_chinensis | RchiOBHm_Chr7g0180421 RchiOBHm_Chr7g0180441 |
| rosa_laevigata | RLG00000005265 RLG00000005267 |
| rosa_multiflora | Rmu_sc0003322.1_g000002 Rmu_sc0003526.1_g000001 Rmu_sc0003526.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00272870 Rroxscaffold_3G00272900 |
| rosa_rugosa | Rorug06G0433000 |
| rosa_samantha | Rh7AG033600 Rh7AG033700 Rh7BG033600 Rh7BG033700 Rh7CG035500 Rh7CG035600 Rh7DG034000 Rh7DG034200 |
| rosa_wichuraiana | Rw7G002810 Rw7G002820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1414 |
| AccBSI | CCGCTC | 1 cut(s) | 527 |
| AccI | GTMKAC | 4 cut(s) | 29, 63, 675, 1239 |
| AccII | CGCG | 6 cut(s) | 362, 647, 846, 860, 1340, 1355 |
| AclI | AACGTT | 1 cut(s) | 1842 |
| AclWI | GGATC | 7 cut(s) | 197, 391, 646, 1001, 1557, 1570, 1701 |
| AcoI | YGGCCR | 1 cut(s) | 804 |
| AcuI | CTGAAG | 3 cut(s) | 263, 993, 1127 |
| AcyI | GRCGYC | 1 cut(s) | 1415 |
| AfaI | GTAC | 3 cut(s) | 1024, 1251, 1772 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 476, 520, 806, 1406, 1424 |
| AgsI | TTSAA | 5 cut(s) | 20, 98, 238, 1040, 1678 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 705 |
| AjnI | CCWGG | 1 cut(s) | 1722 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 927, 959 |
| AleI | CACNNNNGTG | 1 cut(s) | 1196 |
| Alw26I | GTCTC | 2 cut(s) | 164, 509 |
| AlwI | GGATC | 7 cut(s) | 197, 391, 646, 1001, 1557, 1570, 1701 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 655 |
| Ama87I | CYCGRG | 3 cut(s) | 506, 790, 1538 |
| AoxI | GGCC | 4 cut(s) | 467, 478, 738, 804 |
| ApeKI | GCWGC | 8 cut(s) | 257, 311, 407, 431, 985, 1187, 1465, 1499 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 317, 349 |
| AseI | ATTAAT | 1 cut(s) | 291 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 105 |
| AspLEI | GCGC | 2 cut(s) | 649, 1417 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AsuC2I | CCSGG | 1 cut(s) | 1291 |
| AsuHPI | GGTGA | 1 cut(s) | 1762 |
| AvaI | CYCGRG | 3 cut(s) | 506, 790, 1538 |
| BamHI | GGATCC | 1 cut(s) | 1562 |
| BanI | GGYRCC | 1 cut(s) | 1414 |
| BbsI | GAAGAC | 3 cut(s) | 226, 981, 1123 |
| BbvCI | CCTCAGC | 1 cut(s) | 1668 |
| BbvI | GCAGC | 8 cut(s) | 244, 298, 418, 419, 997, 1199, 1477, 1511 |
| BccI | CCATC | 6 cut(s) | 272, 493, 722, 986, 1574, 1755 |
| BceAI | ACGGC | 3 cut(s) | 44, 96, 707 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1312, 1346 |
| BciT130I | CCWGG | 1 cut(s) | 1724 |
| BclI | TGATCA | 1 cut(s) | 565 |
| BcnI | CCSGG | 1 cut(s) | 1291 |
| BcoDI | GTCTC | 2 cut(s) | 164, 509 |
| BfaI | CTAG | 2 cut(s) | 668, 1283 |
| BfmI | CTRYAG | 2 cut(s) | 228, 405 |
| BfoI | RGCGCY | 1 cut(s) | 1418 |
| Bme1390I | CCNGG | 2 cut(s) | 1291, 1724 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 705 |
| BmeT110I | CYCGRG | 3 cut(s) | 506, 790, 1538 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BmiI | GGNNCC | 3 cut(s) | 512, 1416, 1564 |
| BmrFI | CCNGG | 2 cut(s) | 1291, 1724 |
| BmsI | GCATC | 3 cut(s) | 433, 1062, 1091 |
| BoxI | GACNNNNGTC | 1 cut(s) | 668 |
| BpiI | GAAGAC | 3 cut(s) | 226, 981, 1123 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 30 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1159, 1165, 1668 |
| BpuEI | CTTGAG | 2 cut(s) | 44, 801 |
| BpuMI | CCSGG | 1 cut(s) | 1291 |
| BsaAI | YACGTR | 1 cut(s) | 1198 |
| BsaHI | GRCGYC | 1 cut(s) | 1415 |
| BsaI | GGTCTC | 1 cut(s) | 509 |
| BsaJI | CCNNGG | 4 cut(s) | 789, 869, 1010, 1600 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 896, 926, 1161, 1191, 1572, 1602 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 476, 520, 806, 1406, 1424 |
| Bse118I | RCCGGY | 1 cut(s) | 806 |
| Bse1I | ACTGG | 4 cut(s) | 1282, 1324, 1479, 1664 |
| BseBI | CCWGG | 1 cut(s) | 1724 |
| BseDI | CCNNGG | 4 cut(s) | 789, 869, 1010, 1600 |
| BseGI | GGATG | 2 cut(s) | 424, 714 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 476, 520, 806, 1406, 1424 |
| BseMII | CTCAG | 2 cut(s) | 1179, 1659 |
| BseNI | ACTGG | 4 cut(s) | 1282, 1324, 1479, 1664 |
| BseRI | GAGGAG | 3 cut(s) | 1564, 1596, 1599 |
| BseXI | GCAGC | 8 cut(s) | 244, 298, 418, 419, 997, 1199, 1477, 1511 |
| Bsh1236I | CGCG | 6 cut(s) | 362, 647, 846, 860, 1340, 1355 |
| Bsh1285I | CGRYCG | 4 cut(s) | 340, 705, 1153, 1246 |
| BshFI | GGCC | 4 cut(s) | 469, 480, 740, 806 |
| BshNI | GGYRCC | 1 cut(s) | 1414 |
| BsiEI | CGRYCG | 4 cut(s) | 340, 705, 1153, 1246 |
| BsiHKCI | CYCGRG | 3 cut(s) | 506, 790, 1538 |
| BsiSI | CCGG | 2 cut(s) | 807, 1290 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 476, 520, 806, 1406, 1424 |
| BsmAI | GTCTC | 2 cut(s) | 164, 509 |
| BsnI | GGCC | 4 cut(s) | 469, 480, 740, 806 |
| Bso31I | GGTCTC | 1 cut(s) | 509 |
| BsoBI | CYCGRG | 3 cut(s) | 506, 790, 1538 |
| Bsp1407I | TGTACA | 1 cut(s) | 1022 |
| BspANI | GGCC | 4 cut(s) | 469, 480, 740, 806 |
| BspCNI | CTCAG | 2 cut(s) | 1178, 1660 |
| BspFNI | CGCG | 6 cut(s) | 362, 647, 846, 860, 1340, 1355 |
| BspHI | TCATGA | 1 cut(s) | 1707 |
| BspLI | GGNNCC | 3 cut(s) | 512, 1416, 1564 |
| BspMAI | CTGCAG | 2 cut(s) | 232, 409 |
| BspPI | GGATC | 7 cut(s) | 197, 391, 646, 1001, 1557, 1570, 1701 |
| BspT107I | GGYRCC | 1 cut(s) | 1414 |
| BspTNI | GGTCTC | 1 cut(s) | 509 |
| BsrBI | CCGCTC | 1 cut(s) | 527 |
| BsrFI | RCCGGY | 1 cut(s) | 806 |
| BsrGI | TGTACA | 1 cut(s) | 1022 |
| BsrI | ACTGG | 4 cut(s) | 1282, 1324, 1479, 1664 |
| BssAI | RCCGGY | 1 cut(s) | 806 |
| BssECI | CCNNGG | 4 cut(s) | 789, 869, 1010, 1600 |
| BssNAI | GTATAC | 1 cut(s) | 64 |
| BssNI | GRCGYC | 1 cut(s) | 1415 |
| BssT1I | CCWWGG | 3 cut(s) | 869, 1010, 1600 |
| Bst1107I | GTATAC | 1 cut(s) | 64 |
| Bst2UI | CCWGG | 1 cut(s) | 1724 |
| Bst4CI | ACNGT | 7 cut(s) | 68, 543, 611, 1154, 1225, 1247, 1624 |
| Bst6I | CTCTTC | 2 cut(s) | 239, 1703 |
| BstACI | GRCGYC | 1 cut(s) | 1415 |
| BstAUI | TGTACA | 1 cut(s) | 1022 |
| BstBAI | YACGTR | 1 cut(s) | 1198 |
| BstC8I | GCNNGC | 5 cut(s) | 529, 742, 760, 858, 1002 |
| BstDEI | CTNAG | 5 cut(s) | 353, 550, 1159, 1165, 1668 |
| BstF5I | GGATG | 2 cut(s) | 424, 714 |
| BstFNI | CGCG | 6 cut(s) | 362, 647, 846, 860, 1340, 1355 |
| BstH2I | RGCGCY | 1 cut(s) | 1418 |
| BstHHI | GCGC | 2 cut(s) | 649, 1417 |
| BstMAI | GTCTC | 2 cut(s) | 164, 509 |
| BstMCI | CGRYCG | 4 cut(s) | 340, 705, 1153, 1246 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 368, 421, 560, 812, 1155, 1462, 1484, 1499 |
| BstNI | CCWGG | 1 cut(s) | 1724 |
| BstNSI | RCATGY | 2 cut(s) | 375, 438 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 668 |
| BstSCI | CCNGG | 2 cut(s) | 1289, 1722 |
| BstSFI | CTRYAG | 2 cut(s) | 228, 405 |
| BstUI | CGCG | 6 cut(s) | 362, 647, 846, 860, 1340, 1355 |
| BstV1I | GCAGC | 8 cut(s) | 244, 298, 418, 419, 997, 1199, 1477, 1511 |
| BstV2I | GAAGAC | 3 cut(s) | 226, 981, 1123 |
| BstX2I | RGATCY | 3 cut(s) | 651, 1562, 1693 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1198 |
| BstYI | RGATCY | 3 cut(s) | 651, 1562, 1693 |
| BstZ17I | GTATAC | 1 cut(s) | 64 |
| BsuRI | GGCC | 4 cut(s) | 469, 480, 740, 806 |
| BtgZI | GCGATG | 1 cut(s) | 352 |
| BtsCI | GGATG | 2 cut(s) | 424, 714 |
| BtsI | GCAGTG | 1 cut(s) | 417 |
| BtsIMutI | CAGTG | 2 cut(s) | 417, 1472 |
| Cac8I | GCNNGC | 5 cut(s) | 529, 742, 760, 858, 1002 |
| CaiI | CAGNNNCTG | 1 cut(s) | 655 |
| CciI | TCATGA | 1 cut(s) | 1707 |
| CfoI | GCGC | 2 cut(s) | 649, 1417 |
| Cfr10I | RCCGGY | 1 cut(s) | 806 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| Csp6I | GTAC | 3 cut(s) | 1023, 1250, 1771 |
| CviAII | CATG | 6 cut(s) | 148, 372, 435, 1264, 1546, 1708 |
| CviQI | GTAC | 3 cut(s) | 1023, 1250, 1771 |
| DdeI | CTNAG | 5 cut(s) | 353, 550, 1159, 1165, 1668 |
| DinI | GGCGCC | 1 cut(s) | 1416 |
| DriI | GACNNNNNGTC | 1 cut(s) | 705 |
| EaeI | YGGCCR | 1 cut(s) | 804 |
| Eam1104I | CTCTTC | 2 cut(s) | 239, 1703 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 705 |
| EarI | CTCTTC | 2 cut(s) | 239, 1703 |
| EciI | GGCGGA | 2 cut(s) | 46, 464 |
| Eco130I | CCWWGG | 3 cut(s) | 869, 1010, 1600 |
| Eco31I | GGTCTC | 1 cut(s) | 509 |
| Eco57I | CTGAAG | 3 cut(s) | 263, 993, 1127 |
| Eco88I | CYCGRG | 3 cut(s) | 506, 790, 1538 |
| EcoRII | CCWGG | 1 cut(s) | 1722 |
| EcoT14I | CCWWGG | 3 cut(s) | 869, 1010, 1600 |
| EgeI | GGCGCC | 1 cut(s) | 1416 |
| EheI | GGCGCC | 1 cut(s) | 1416 |
| ErhI | CCWWGG | 3 cut(s) | 869, 1010, 1600 |
| FaeI | CATG | 6 cut(s) | 151, 375, 438, 1267, 1549, 1711 |
| FatI | CATG | 6 cut(s) | 147, 371, 434, 1263, 1545, 1707 |
| FauI | CCCGC | 6 cut(s) | 520, 751, 865, 1192, 1348, 1471 |
| FauNDI | CATATG | 2 cut(s) | 458, 1801 |
| FbaI | TGATCA | 1 cut(s) | 565 |
| FblI | GTMKAC | 4 cut(s) | 29, 63, 675, 1239 |
| FokI | GGATG | 2 cut(s) | 411, 701 |
| FspBI | CTAG | 2 cut(s) | 668, 1283 |
| GlaI | GCGC | 2 cut(s) | 648, 1416 |
| HaeII | RGCGCY | 1 cut(s) | 1418 |
| HaeIII | GGCC | 4 cut(s) | 469, 480, 740, 806 |
| HapII | CCGG | 2 cut(s) | 807, 1290 |
| HhaI | GCGC | 2 cut(s) | 649, 1417 |
| Hin1I | GRCGYC | 1 cut(s) | 1415 |
| Hin1II | CATG | 6 cut(s) | 151, 375, 438, 1267, 1549, 1711 |
| Hin6I | GCGC | 2 cut(s) | 647, 1415 |
| HinP1I | GCGC | 2 cut(s) | 647, 1415 |
| HincII | GTYRAC | 2 cut(s) | 30, 88 |
| HindII | GTYRAC | 2 cut(s) | 30, 88 |
| HindIII | AAGCTT | 1 cut(s) | 182 |
| HpaII | CCGG | 2 cut(s) | 807, 1290 |
| HphI | GGTGA | 1 cut(s) | 1762 |
| Hpy166II | GTNNAC | 7 cut(s) | 30, 64, 88, 676, 1240, 1250, 1627 |
| Hpy188I | TCNGA | 6 cut(s) | 111, 117, 299, 941, 1146, 1392 |
| Hpy8I | GTNNAC | 7 cut(s) | 30, 64, 88, 676, 1240, 1250, 1627 |
| Hpy99I | CGWCG | 3 cut(s) | 34, 1158, 1441 |
| HpyAV | CCTTC | 5 cut(s) | 60, 221, 646, 1151, 1368 |
| HpyCH4III | ACNGT | 7 cut(s) | 68, 543, 611, 1154, 1225, 1247, 1624 |
| HpyCH4IV | ACGT | 4 cut(s) | 678, 1197, 1575, 1842 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 368, 421, 560, 812, 1155, 1462, 1484, 1499 |
| HpyF3I | CTNAG | 5 cut(s) | 353, 550, 1159, 1165, 1668 |
| HpySE526I | ACGT | 4 cut(s) | 678, 1197, 1575, 1842 |
| Hsp92I | GRCGYC | 1 cut(s) | 1415 |
| Hsp92II | CATG | 6 cut(s) | 151, 375, 438, 1267, 1549, 1711 |
| HspAI | GCGC | 2 cut(s) | 647, 1415 |
| KasI | GGCGCC | 1 cut(s) | 1414 |
| Ksp22I | TGATCA | 1 cut(s) | 565 |
| LmnI | GCTCC | 1 cut(s) | 524 |
| Lsp1109I | GCAGC | 8 cut(s) | 244, 298, 418, 419, 997, 1199, 1477, 1511 |
| LweI | GCATC | 3 cut(s) | 433, 1062, 1091 |
| MaeI | CTAG | 2 cut(s) | 668, 1283 |
| MaeII | ACGT | 4 cut(s) | 678, 1197, 1575, 1842 |
| MaeIII | GTNAC | 7 cut(s) | 76, 323, 461, 545, 1595, 1655, 1792 |
| MbiI | CCGCTC | 1 cut(s) | 527 |
| MflI | RGATCY | 3 cut(s) | 651, 1562, 1693 |
| MluCI | AATT | 9 cut(s) | 288, 292, 619, 886, 935, 1089, 1272, 1311, 1732 |
| Mly113I | GGCGCC | 1 cut(s) | 1415 |
| MlyI | GAGTC | 5 cut(s) | 35, 83, 343, 658, 961 |
| MmeI | TCCRAC | 2 cut(s) | 677, 1558 |
| MroXI | GAANNNNTTC | 1 cut(s) | 105 |
| MseI | TTAA | 9 cut(s) | 224, 270, 291, 573, 618, 851, 876, 1100, 1731 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1196 |
| MspA1I | CMGCKG | 3 cut(s) | 257, 431, 446 |
| MspI | CCGG | 2 cut(s) | 807, 1290 |
| MspR9I | CCNGG | 2 cut(s) | 1291, 1724 |
| MvaI | CCWGG | 1 cut(s) | 1724 |
| MvnI | CGCG | 6 cut(s) | 362, 647, 846, 860, 1340, 1355 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 368, 421, 560, 812, 1155, 1462, 1484, 1499 |
| NarI | GGCGCC | 1 cut(s) | 1415 |
| NciI | CCSGG | 1 cut(s) | 1291 |
| NdeI | CATATG | 2 cut(s) | 458, 1801 |
| NlaIII | CATG | 6 cut(s) | 151, 375, 438, 1267, 1549, 1711 |
| NlaIV | GGNNCC | 3 cut(s) | 512, 1416, 1564 |
| NmuCI | GTSAC | 2 cut(s) | 323, 1792 |
| NspI | RCATGY | 2 cut(s) | 375, 438 |
| OliI | CACNNNNGTG | 1 cut(s) | 1196 |
| PagI | TCATGA | 1 cut(s) | 1707 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 303, 1239 |
| PdmI | GAANNNNTTC | 1 cut(s) | 105 |
| PfeI | GAWTC | 6 cut(s) | 46, 112, 587, 1180, 1459, 1719 |
| Ple19I | CGATCG | 1 cut(s) | 705 |
| PleI | GAGTC | 5 cut(s) | 34, 83, 343, 658, 961 |
| PluTI | GGCGCC | 1 cut(s) | 1418 |
| PpsI | GAGTC | 5 cut(s) | 34, 83, 343, 658, 961 |
| Ppu21I | YACGTR | 1 cut(s) | 1198 |
| PshAI | GACNNNNGTC | 1 cut(s) | 668 |
| PshBI | ATTAAT | 1 cut(s) | 291 |
| Psp1406I | AACGTT | 1 cut(s) | 1842 |
| Psp6I | CCWGG | 1 cut(s) | 1722 |
| PspGI | CCWGG | 1 cut(s) | 1722 |
| PspN4I | GGNNCC | 3 cut(s) | 512, 1416, 1564 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PstI | CTGCAG | 2 cut(s) | 232, 409 |
| PstNI | CAGNNNCTG | 1 cut(s) | 655 |
| PsuI | RGATCY | 3 cut(s) | 651, 1562, 1693 |
| PvuI | CGATCG | 1 cut(s) | 705 |
| PvuII | CAGCTG | 2 cut(s) | 257, 431 |
| RsaI | GTAC | 3 cut(s) | 1024, 1251, 1772 |
| RsaNI | GTAC | 3 cut(s) | 1023, 1250, 1771 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1196 |
| SalI | GTCGAC | 1 cut(s) | 28 |
| SaqAI | TTAA | 9 cut(s) | 224, 270, 291, 573, 618, 851, 876, 1100, 1731 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| SchI | GAGTC | 5 cut(s) | 35, 83, 343, 658, 961 |
| ScrFI | CCNGG | 2 cut(s) | 1291, 1724 |
| SfaNI | GCATC | 3 cut(s) | 433, 1062, 1091 |
| SfcI | CTRYAG | 2 cut(s) | 228, 405 |
| SfoI | GGCGCC | 1 cut(s) | 1416 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1196 |
| SmlI | CTYRAG | 2 cut(s) | 23, 816 |
| SmoI | CTYRAG | 2 cut(s) | 23, 816 |
| Sse9I | AATT | 9 cut(s) | 288, 292, 619, 886, 935, 1089, 1272, 1311, 1732 |
| SspDI | GGCGCC | 1 cut(s) | 1414 |
| SspMI | CTAG | 2 cut(s) | 668, 1283 |
| StyD4I | CCNGG | 2 cut(s) | 1289, 1722 |
| StyI | CCWWGG | 3 cut(s) | 869, 1010, 1600 |
| TaaI | ACNGT | 7 cut(s) | 68, 543, 611, 1154, 1225, 1247, 1624 |
| TaiI | ACGT | 4 cut(s) | 681, 1200, 1578, 1845 |
| TaqI | TCGA | 5 cut(s) | 29, 340, 1365, 1439, 1592 |
| TaqII | GACCGA | 2 cut(s) | 326, 695 |
| TasI | AATT | 9 cut(s) | 288, 292, 619, 886, 935, 1089, 1272, 1311, 1732 |
| TatI | WGTACW | 2 cut(s) | 1022, 1249 |
| TauI | GCSGC | 2 cut(s) | 449, 959 |
| TfiI | GAWTC | 6 cut(s) | 46, 112, 587, 1180, 1459, 1719 |
| Tru1I | TTAA | 9 cut(s) | 224, 270, 291, 573, 618, 851, 876, 1100, 1731 |
| Tru9I | TTAA | 9 cut(s) | 224, 270, 291, 573, 618, 851, 876, 1100, 1731 |
| TscAI | CASTG | 2 cut(s) | 417, 1479 |
| TseFI | GTSAC | 2 cut(s) | 323, 1792 |
| TseI | GCWGC | 8 cut(s) | 257, 311, 407, 431, 985, 1187, 1465, 1499 |
| Tsp45I | GTSAC | 2 cut(s) | 323, 1792 |
| TspDTI | ATGAA | 4 cut(s) | 1219, 1696, 1818, 1827 |
| TspGWI | ACGGA | 1 cut(s) | 47 |
| TspRI | CASTG | 2 cut(s) | 417, 1479 |
| VspI | ATTAAT | 1 cut(s) | 291 |
| XbaI | TCTAGA | 1 cut(s) | 1282 |
| XceI | RCATGY | 2 cut(s) | 375, 438 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1510 |
| XmiI | GTMKAC | 4 cut(s) | 29, 63, 675, 1239 |
| XmnI | GAANNNNTTC | 1 cut(s) | 105 |
| XspI | CTAG | 2 cut(s) | 668, 1283 |