Prupe.5G185100_v2.0.a1

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15372881 .. 15375529
2649 bp
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UTR
Exon/CDS
Intron
Prupe.5G185100.1

Sequence Viewer

Length: 1839 bp
ATGAGAGAGATCGTGGAGAAGAATGAGAGAGATGATAGCATGGAGAAGACTGAGAGAGATGATAGCATGGAGAAGACTGAGAGAGGTAATAGTTCTAGAACTGAGGAGCCAGTTAACTACAGAGGATGGAAAGCAATGCCATTTGTCATAGGAAATGAAACATTTGAGAAGCTGGGAGCCATTGGCACCTTGTCCAACCTCTTGGTCTATCTCATTAGTGTCTTCAACATGAAGAAGATCACAGCTGCAACTATGCTCATCATCTTCAATGGCACCACCAACTTCGCTACCTTGCTCGGAGCTTTCGCTTCAGACACTTATTTCGGTCGCTATAAGACTCTGGGTTTTTCTTCATTCGCTTCTTTTTTGGGGCTGCTGCTGATAGATCTTACAGTAGTGTTCAAGAAGCTGCATCCTCCTCATTGCAAAGCAGAAGAAGGAGAAACATGTAAAGGGCCAACAACTGGGCAGATGGCATTTTTACTAACTGGTTTTGCACTACTAGTGGTAGGAGCTGCAGGCATCAGGCCATGTAACTTGGCATTTGGAGCTGACCAATTCAACCCCAAAACAGAATCTGGGAAAAGAGGCATCAACAGCTTCTTCAATTGGTACTTTTTCACCTTCACTTTTGCACAGATGGTAGCTTTGACCCTCATTGTCTATGTTCAATCAAAGATAAGCTGGGCTCTTGGGTTTGGCATTCCACCCATTCTAATGTTAATATCATGTGCCCTCTTCTTTATGGGTTCAAAAATGTATGTGAAAGTAAAAGCCACAGGCAGCCCTATTACAAGTCTAGCACAGGTCATAGTGGTTGCTATCAAGAAAAGGCATTTGAAGCTATCAGAGCCAGAGCAACCATGGTTCTGCATGTTTATTTATATGCCTCCCAATTCTATCAACTCCAAGCTTCCTAACACAAATCAGTTCAGATACCTTGACAAAGCAGCAATTCTTACACCCCAAGACGAAATACTCCCGGATGGATCAGCAGCTAATCCTTGGAGACTTTGCAGCATGCAGCAAGTGGAAGAATTGAAATGCCTGCTGAGAGTTTTACCAATATGGGCTGCAGCTCTCGTATGCCATGTTGCAATAGTCCAACTGCAAACCTACGTTGTCTTTCAAGCCATTCAATCCGATAGACGCCTTGGAAACACCAATTTCGACATCCCACCTGCATCCTACTCTGTCTTCTTGATGCTGAGCATGACCATTTGGATACCAATCTATGACCAACTTGTTGTCCCATTCCTCCAAAGGCTCACAGGAAAAGAAGGCGGCATCACTCTCTTGCAGAGGATAGGAATTGGCACGTTTCTCACTGTAATCTGCATGATAGTATCTGCATTTGTTGAAGAACGCCGAAGGACTATAGCTCTAACTAAACCGATTCCAGGACCAAAGGGTGCCATTTCTTCCATGTCAGGCTTTTGGTTGATCCCTCAGCTCTCAATTGCTGGACTTGCTGACGCATTCACCACCGTTGGTCAAATTGAGTTCTACTACAAGCAGTTCCCTGAAAACATGAGAAGCATTGCAGGGTCTCTCTTCTTTTGTGGAATAGCAGGTTCAAGTTACTTAAGCAGTTTGTTAATTGCGGTAGTTCACCGGACGACTGAGGGGGCTGCAACTGGAAATTGGCTGCCAGAAGATCTAAACAAGGGGAGATTGGACTACTTCTATTACTTGATTGCTGCTCTAGGAGCCATTAATTTGGGCTACTTTTTAGTTTGTGCAAATTGGTACAAGTACAAAGGTACTGAGAACAACAATGCCCTTGGAGTTGAAGTTGAACTGGTGAGGGAAAAACTGCTGGTTGATAATGAAGCTTAG

Protein Analysis

613

Amino Acids

68.12

Weight (kDa)

8.68

Isoelectric Point (pI)

33.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1189
Acc36I ACCTGC 2 cut(s) 1189, 1562
AccB1I GGYRCC 3 cut(s) 185, 272, 1412
AccB7I CCANNNNNTGG 1 cut(s) 464
AciI CCGC 2 cut(s) 1284, 1604
AclWI GGATC 2 cut(s) 997, 1438
AcuI CTGAAG 1 cut(s) 294
AcyI GRCGYC 1 cut(s) 1150
AfaI GTAC 4 cut(s) 614, 1751, 1757, 1765
AfiI CCNNNNNNNGG 2 cut(s) 464, 1400
AflII CTTAAG 1 cut(s) 1585
AflIII ACRYGT 1 cut(s) 446
AhlI ACTAGT 1 cut(s) 502
AjnI CCWGG 1 cut(s) 1399
Alw26I GTCTC 2 cut(s) 1003, 1554
AlwI GGATC 2 cut(s) 997, 1438
AlwNI CAGNNNCTG 1 cut(s) 578
AoxI GGCC 2 cut(s) 455, 527
ArsI GACNNNNNNTTYG 2 cut(s) 305, 337
AseI ATTAAT 1 cut(s) 1716
AspS9I GGNCC 2 cut(s) 455, 1403
AsuC2I CCSGG 1 cut(s) 983
AsuHPI GGTGA 4 cut(s) 613, 1474, 1604, 1816
AvaII GGWCC 1 cut(s) 1403
BaeGI GKGCMC 1 cut(s) 736
BanI GGYRCC 3 cut(s) 185, 272, 1412
BanII GRGCYC 1 cut(s) 691
BbsI GAAGAC 4 cut(s) 53, 80, 214, 1189
BbvCI CCTCAGC 1 cut(s) 1449
BccI CCATC 4 cut(s) 120, 466, 634, 980
BciT130I CCWGG 1 cut(s) 1401
BciVI GTATCC 1 cut(s) 1218
BcnI CCSGG 1 cut(s) 983
BcoDI GTCTC 2 cut(s) 1003, 1554
BcuI ACTAGT 1 cut(s) 502
BfaI CTAG 4 cut(s) 96, 503, 800, 1706
BfmI CTRYAG 4 cut(s) 118, 516, 1074, 1377
BfrI CTTAAG 1 cut(s) 1585
BfuAI ACCTGC 2 cut(s) 1189, 1562
BfuI GTATCC 1 cut(s) 1218
BglII AGATCT 2 cut(s) 385, 1657
BlpI GCTNAGC 1 cut(s) 1208
Bme1390I CCNGG 2 cut(s) 983, 1401
Bme18I GGWCC 1 cut(s) 1403
BmgT120I GGNCC 2 cut(s) 455, 1403
BmiI GGNNCC 6 cut(s) 108, 178, 187, 274, 1414, 1711
BmrFI CCNGG 2 cut(s) 983, 1401
BmrI ACTGGG 1 cut(s) 474
BmsI GCATC 6 cut(s) 421, 531, 600, 1193, 1194, 1296
BmuI ACTGGG 1 cut(s) 474
BpiI GAAGAC 4 cut(s) 53, 80, 214, 1189
Bpu10I CCTNAGC 1 cut(s) 1449
Bpu1102I GCTNAGC 1 cut(s) 1208
BpuMI CCSGG 1 cut(s) 983
BsaBI GATNNNNATC 1 cut(s) 1229
BsaHI GRCGYC 1 cut(s) 1150
BsaI GGTCTC 1 cut(s) 1554
BsaJI CCNNGG 4 cut(s) 863, 1004, 1153, 1783
BsaWI WCCGGW 1 cut(s) 1614
BsaXI ACNNNNNCTCC 2 cut(s) 1779, 1809
Bsc4I CCNNNNNNNGG 2 cut(s) 464, 1400
Bse1I ACTGG 5 cut(s) 110, 469, 493, 1642, 1806
Bse3DI GCAATG 3 cut(s) 141, 421, 1539
Bse8I GATNNNNATC 1 cut(s) 1229
BseBI CCWGG 1 cut(s) 1401
BseDI CCNNGG 4 cut(s) 863, 1004, 1153, 1783
BseGI GGATG 5 cut(s) 131, 412, 991, 1173, 1184
BseJI GATNNNNATC 1 cut(s) 1229
BseLI CCNNNNNNNGG 2 cut(s) 464, 1400
BseMI GCAATG 3 cut(s) 141, 421, 1539
BseMII CTCAG 8 cut(s) 42, 69, 93, 1043, 1199, 1463, 1614, 1758
BseNI ACTGG 5 cut(s) 110, 469, 493, 1642, 1806
BseRI GAGGAG 2 cut(s) 119, 408
BseSI GKGCMC 1 cut(s) 736
BseYI CCCAGC 2 cut(s) 172, 684
Bsh1285I CGRYCG 1 cut(s) 328
BshFI GGCC 2 cut(s) 457, 529
BshNI GGYRCC 3 cut(s) 185, 272, 1412
BsiEI CGRYCG 1 cut(s) 328
BsiSI CCGG 2 cut(s) 983, 1615
BslFI GGGAC 1 cut(s) 1235
BslI CCNNNNNNNGG 2 cut(s) 464, 1400
BsmAI GTCTC 2 cut(s) 1003, 1554
BsmFI GGGAC 1 cut(s) 1235
BsmI GAATGC 2 cut(s) 702, 1478
BsnI GGCC 2 cut(s) 457, 529
Bso31I GGTCTC 1 cut(s) 1554
Bsp1286I GDGCHC 2 cut(s) 691, 736
Bsp143I GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
Bsp1720I GCTNAGC 1 cut(s) 1208
Bsp19I CCATGG 1 cut(s) 863
BspACI CCGC 2 cut(s) 1284, 1604
BspANI GGCC 2 cut(s) 457, 529
BspCNI CTCAG 8 cut(s) 43, 70, 94, 1044, 1200, 1462, 1615, 1759
BspLI GGNNCC 6 cut(s) 108, 178, 187, 274, 1414, 1711
BspMAI CTGCAG 2 cut(s) 520, 1078
BspMI ACCTGC 2 cut(s) 1189, 1562
BspPI GGATC 2 cut(s) 997, 1438
BspT107I GGYRCC 3 cut(s) 185, 272, 1412
BspTI CTTAAG 1 cut(s) 1585
BspTNI GGTCTC 1 cut(s) 1554
BsrDI GCAATG 3 cut(s) 141, 421, 1539
BsrI ACTGG 5 cut(s) 110, 469, 493, 1642, 1806
BssECI CCNNGG 4 cut(s) 863, 1004, 1153, 1783
BssMI GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
BssNI GRCGYC 1 cut(s) 1150
BssT1I CCWWGG 4 cut(s) 863, 1004, 1153, 1783
Bst2UI CCWGG 1 cut(s) 1401
Bst4CI ACNGT 3 cut(s) 394, 1330, 1489
Bst6I CTCTTC 2 cut(s) 743, 1559
BstACI GRCGYC 1 cut(s) 1150
BstAFI CTTAAG 1 cut(s) 1585
BstC8I GCNNGC 3 cut(s) 520, 1022, 1049
BstDEI CTNAG 9 cut(s) 51, 78, 102, 1052, 1208, 1449, 1623, 1767, 1836
BstDSI CCRYGG 1 cut(s) 863
BstF5I GGATG 5 cut(s) 131, 412, 991, 1173, 1184
BstKTI GATC 6 cut(s) 12, 240, 388, 992, 1446, 1660
BstMAI GTCTC 2 cut(s) 1003, 1554
BstMBI GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
BstMCI CGRYCG 1 cut(s) 328
BstMWI GCNNNNNNNGC 6 cut(s) 548, 597, 841, 850, 1469, 1709
BstNI CCWGG 1 cut(s) 1401
BstNSI RCATGY 3 cut(s) 450, 877, 1024
BstSCI CCNGG 2 cut(s) 981, 1399
BstSFI CTRYAG 4 cut(s) 118, 516, 1074, 1377
BstSLI GKGCMC 1 cut(s) 736
BstV2I GAAGAC 4 cut(s) 53, 80, 214, 1189
BstX2I RGATCY 2 cut(s) 385, 1657
BstXI CCANNNNNNTGG 2 cut(s) 202, 1720
BstYI RGATCY 2 cut(s) 385, 1657
BsuI GTATCC 1 cut(s) 1218
BsuRI GGCC 2 cut(s) 457, 529
BtgI CCRYGG 1 cut(s) 863
BtsCI GGATG 5 cut(s) 131, 412, 991, 1173, 1184
BtsIMutI CAGTG 1 cut(s) 1326
BveI ACCTGC 2 cut(s) 1189, 1562
Cac8I GCNNGC 3 cut(s) 520, 1022, 1049
CaiI CAGNNNCTG 1 cut(s) 578
Cfr13I GGNCC 2 cut(s) 455, 1403
CseI GACGC 2 cut(s) 1158, 1484
Csp6I GTAC 4 cut(s) 613, 1750, 1756, 1764
CviQI GTAC 4 cut(s) 613, 1750, 1756, 1764
DdeI CTNAG 9 cut(s) 51, 78, 102, 1052, 1208, 1449, 1623, 1767, 1836
DpnI GATC 6 cut(s) 11, 239, 387, 991, 1445, 1659
DpnII GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
Eam1104I CTCTTC 2 cut(s) 743, 1559
EarI CTCTTC 2 cut(s) 743, 1559
Eco130I CCWWGG 4 cut(s) 863, 1004, 1153, 1783
Eco24I GRGCYC 1 cut(s) 691
Eco31I GGTCTC 1 cut(s) 1554
Eco47I GGWCC 1 cut(s) 1403
Eco57I CTGAAG 1 cut(s) 294
EcoRII CCWGG 1 cut(s) 1399
EcoT14I CCWWGG 4 cut(s) 863, 1004, 1153, 1783
EcoT38I GRGCYC 1 cut(s) 691
ErhI CCWWGG 4 cut(s) 863, 1004, 1153, 1783
FaqI GGGAC 1 cut(s) 1235
FokI GGATG 5 cut(s) 138, 399, 998, 1160, 1171
FriOI GRGCYC 1 cut(s) 691
FspBI CTAG 4 cut(s) 96, 503, 800, 1706
GsaI CCCAGC 2 cut(s) 176, 688
HaeIII GGCC 2 cut(s) 457, 529
HapII CCGG 2 cut(s) 983, 1615
HgaI GACGC 2 cut(s) 1158, 1484
Hin1I GRCGYC 1 cut(s) 1150
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HindIII AAGCTT 2 cut(s) 911, 1833
HinfI GANTC 3 cut(s) 337, 575, 1396
HpaI GTTAAC 1 cut(s) 115
HpaII CCGG 2 cut(s) 983, 1615
HphI GGTGA 4 cut(s) 613, 1474, 1604, 1816
Hpy166II GTNNAC 2 cut(s) 115, 1612
Hpy188I TCNGA 5 cut(s) 299, 313, 850, 935, 1144
Hpy188III TCNNGA 4 cut(s) 96, 403, 826, 1201
Hpy8I GTNNAC 2 cut(s) 115, 1612
HpyAV CCTTC 4 cut(s) 431, 634, 1274, 1365
HpyCH4III ACNGT 3 cut(s) 394, 1330, 1489
HpyCH4IV ACGT 2 cut(s) 1119, 1319
HpyF10VI GCNNNNNNNGC 6 cut(s) 548, 597, 841, 850, 1469, 1709
HpyF3I CTNAG 9 cut(s) 51, 78, 102, 1052, 1208, 1449, 1623, 1767, 1836
HpySE526I ACGT 2 cut(s) 1119, 1319
Hsp92I GRCGYC 1 cut(s) 1150
KspAI GTTAAC 1 cut(s) 115
Kzo9I GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
LmnI GCTCC 6 cut(s) 106, 176, 299, 512, 548, 1709
LweI GCATC 6 cut(s) 421, 531, 600, 1193, 1194, 1296
MaeI CTAG 4 cut(s) 96, 503, 800, 1706
MaeII ACGT 2 cut(s) 1119, 1319
MaeIII GTNAC 2 cut(s) 533, 1580
MalI GATC 6 cut(s) 11, 239, 387, 991, 1445, 1659
MboI GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
MfeI CAATTG 2 cut(s) 607, 1458
MflI RGATCY 2 cut(s) 385, 1657
MhlI GDGCHC 2 cut(s) 691, 736
MlyI GAGTC 1 cut(s) 331
MmeI TCCRAC 2 cut(s) 219, 1129
MseI TTAA 5 cut(s) 114, 722, 1586, 1598, 1716
MslI CAYNNNNRTG 1 cut(s) 716
MspA1I CMGCKG 1 cut(s) 245
MspCI CTTAAG 1 cut(s) 1585
MspI CCGG 2 cut(s) 983, 1615
MspR9I CCNGG 2 cut(s) 983, 1401
MunI CAATTG 2 cut(s) 607, 1458
Mva1269I GAATGC 2 cut(s) 702, 1478
MvaI CCWGG 1 cut(s) 1401
MwoI GCNNNNNNNGC 6 cut(s) 548, 597, 841, 850, 1469, 1709
NciI CCSGG 1 cut(s) 983
NcoI CCATGG 1 cut(s) 863
NdeII GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
NlaIV GGNNCC 6 cut(s) 108, 178, 187, 274, 1414, 1711
NspI RCATGY 3 cut(s) 450, 877, 1024
PaeI GCATGC 1 cut(s) 1024
PaqCI CACCTGC 1 cut(s) 1189
PciI ACATGT 1 cut(s) 446
PctI GAATGC 2 cut(s) 702, 1478
PfeI GAWTC 2 cut(s) 575, 1396
PflMI CCANNNNNTGG 1 cut(s) 464
PfoI TCCNGGA 2 cut(s) 981, 1399
PleI GAGTC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 331
PscI ACATGT 1 cut(s) 446
PshBI ATTAAT 1 cut(s) 1716
Psp6I CCWGG 1 cut(s) 1399
PspFI CCCAGC 2 cut(s) 172, 684
PspGI CCWGG 1 cut(s) 1399
PspN4I GGNNCC 6 cut(s) 108, 178, 187, 274, 1414, 1711
PspPI GGNCC 2 cut(s) 455, 1403
PstI CTGCAG 2 cut(s) 520, 1078
PstNI CAGNNNCTG 1 cut(s) 578
PsuI RGATCY 2 cut(s) 385, 1657
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 4 cut(s) 614, 1751, 1757, 1765
RsaNI GTAC 4 cut(s) 613, 1750, 1756, 1764
RseI CAYNNNNRTG 1 cut(s) 716
SaqAI TTAA 5 cut(s) 114, 722, 1586, 1598, 1716
Sau3AI GATC 6 cut(s) 9, 237, 385, 989, 1443, 1657
Sau96I GGNCC 2 cut(s) 455, 1403
SchI GAGTC 1 cut(s) 331
ScrFI CCNGG 2 cut(s) 983, 1401
SduI GDGCHC 2 cut(s) 691, 736
SfaNI GCATC 6 cut(s) 421, 531, 600, 1193, 1194, 1296
SfcI CTRYAG 4 cut(s) 118, 516, 1074, 1377
SinI GGWCC 1 cut(s) 1403
SmiMI CAYNNNNRTG 1 cut(s) 716
SmlI CTYRAG 1 cut(s) 1585
SmoI CTYRAG 1 cut(s) 1585
SpeI ACTAGT 1 cut(s) 502
SphI GCATGC 1 cut(s) 1024
SsiI CCGC 2 cut(s) 1284, 1604
SspMI CTAG 4 cut(s) 96, 503, 800, 1706
StyD4I CCNGG 2 cut(s) 981, 1399
StyI CCWWGG 4 cut(s) 863, 1004, 1153, 1783
TaaI ACNGT 3 cut(s) 394, 1330, 1489
TaiI ACGT 2 cut(s) 1122, 1322
TaqI TCGA 1 cut(s) 1170
TaqII GACCGA 1 cut(s) 314
TatI WGTACW 1 cut(s) 1755
TauI GCSGC 1 cut(s) 1287
TfiI GAWTC 2 cut(s) 575, 1396
Tru1I TTAA 5 cut(s) 114, 722, 1586, 1598, 1716
Tru9I TTAA 5 cut(s) 114, 722, 1586, 1598, 1716
TscAI CASTG 1 cut(s) 1333
TspDTI ATGAA 3 cut(s) 171, 245, 342
TspRI CASTG 1 cut(s) 1333
Van91I CCANNNNNTGG 1 cut(s) 464
Vha464I CTTAAG 1 cut(s) 1585
VpaK11BI GGWCC 1 cut(s) 1403
VspI ATTAAT 1 cut(s) 1716
XbaI TCTAGA 1 cut(s) 95
XceI RCATGY 3 cut(s) 450, 877, 1024
XcmI CCANNNNNNNNNTGG 1 cut(s) 861
XspI CTAG 4 cut(s) 96, 503, 800, 1706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.