Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001711

Physical Location & Seq

Genomic Coordinates Forward (+)

64849145 .. 64852472

Gene Structure 3328 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00272900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGAGAACAGTGAAAGAGAAACCATGGTGGAGGTGAAGAAGAATGAGGATCAGTGTTCTATAGCTGAAGAGAAAGTAATCTACAGAGGATGGAAAGCCATGCCATTTGTCATAGGAAATGAAACCTTTGAGAAGCTAGGAGCCATTGGCACCTTGTCCAACCTCTTGGTTTATCTCACTACCGTGTTCAATATGAGCAGCGTTAGAGCTGCAACTATCATCAACATCTTCAATGGCACCACCAATTTTTCTACTTTGATCGGAGCTTTCGTCTCCGACACTTACTGGGGTCGTTTCAAGACCGTCGCCTGTGCTTCAATAGCTTCCTTTATGGGACTGGTCTTGATAGACTTCACTGCAGTATTCAAGGACCTCCATCCTCCCCCTTGCAAAACACAAGACCGCAACGCGTGCAAAGGCCCAACAGGTGGCCAAATGGCATTTTTGGCAGCCGGTCTCGGACTACTAATAGTAGGAGCAGCTGGGATCAGGCCATGTAACTTTGCATTTGGAGCAGACCAGTTCAACCCCAAAACCGAAGCTGGAAAAAAAGGAGTCAACAGCTTCTTCAATTGGTACTTCTTCACCTTCACTGTTGCACAGATGCTGTCCTTGACAATCATTGTGTATGTTCAGTCAAATGTGAGCTGGTCTCTGGGTTTTGGCATTCCAGCCATTCTGATGTTGACGTCATGTGCACTCTTCTTCATGGGTTCAAAATTGTATGTGAAAGTGAAAGCCAGCGGTAGTCCAATGACTAGTGTGGCACAGGTCATAGTGGTTGCTTTTAAGAAAAGGAAACTGAAGGCACTAGAGCAACCATGGCTCTCCCTCTTTGTTTATATGCCTCCCAATTCGATGAACGCCAAGCTTCCTTACACACATCAATTCAGATGCCTTGACAAAGCAGCAATCGTGACCCCAGAAGATGAAAAAAAACCAGATGGATCAGCAGCCAATCCATGGAGACTTTGCAGTATGCAGCAAGTGGAAGAACTGAAATGTCTGGTGAGAGTTTTACCAATATGGGCTGCAGCCCTTGTGTACTATGTTGTTATAGTCCAACAACACACCTATGCAACCTTCCAAGCTCTTCAATTTGATAGAAGAGTTGGAAAGTTCGAGATCCCAGCTGCATCCTACTATGTCTTCTTGATGCTGGCCATGACCATTTGGATCCCCATCTATGACCGACTTGTAGTCCCATTTCTCCAAAGTCGCACAGGAATAGAAGGAGGCATCACAGTGCTGCAAAGAATTGGAACTGGCATATTTCTCTCCATTGTCTCCATGATAGTCTCTGCAATCGTAGAAGAGCGTCGAAGGTCTATAGCTCTAACCGACCCAATCCCAGGAATCAGAACAAGGGGTGACATTTCTTCCATGTCAGGCTTCTGGTTAGTCCCTCAGCTCGCATTGGCTGGACTCGCAGAAGCATTCACTGCCATTGGTCAAGTTGAGTTCTACTACAAGCAGTTCCCTGAAAACATGAGAAGCATTGCAGGGTCTCTCTTCTTTTGTGGAATGGCAGGTTCAAGTTACTTGAGTGGTTTCTTGATTGCAATAGTTCACAGAACCACAGAGGGGGCTGCAACTGGAAATTGGCTGCCGGAAGATCTCAACAAGGGGAGACTTGATTACTTCTACTACATGATTGCTGCTCTTGGAGTCGTTAATTTCGGATACTTTTTGTTCATTGCAAGTTGGTATCAGTATAAAGGTACTGGGATCGATACTACTACTCTTGAAGTCGAAGTTGCTGAGAAATTGAACGTGGTATACAAGGTTGCTCTCTCAACAAATGAACTCCAAGAAAATCAGGCATTGAATGATGTGGAAGTTACGTGTGTCGGGAATAATGGAAAAGAGAGAAGAATGAGAAGAGTAGGCCCATTCCATGAAAGCAAACATGTCGTGAATGGTTTGGCAGCGCAGTTTATTTACTCTTTCCCGAGACGTGTGTCATCACAAAAGGGAATAAAAATGGGGAAGGGGAAAAGGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009506 GO:0009628 GO:0010232 GO:0010233 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015103 GO:0015112 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015698 GO:0015706 GO:0015711 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030054 GO:0032501 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072348 GO:0080167 GO:0090408 GO:0090448 GO:0090449 GO:0098655 GO:0098656 GO:0098660 GO:0098662 GO:1901264 GO:1901349 GO:1901505 GO:1901682 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

668

Amino Acids

74.18

Weight (kDa)

9.27

Isoelectric Point (pI)

31.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	99 - 533	6.8e-82	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18880 AT3G47960 AT5G62680
fragaria_vesca	FvH4_5g15612 FvH4_5g15612 FvH4_5g15612 FvH4_5g15620 FvH4_5g15620 FvH4_5g15620 FvH4_5g15620 FvH4_5g15620 FvH4_5g15670 FvH4_5g15671 FvH4_5g15671 FvH4_5g15671 FvH4_5g15671
malus_domestica	MD06G1186500.v1.1 MD06G1186600.v1.1 MD06G1186700.v1.1 MD14G1192700.v1.1 MD14G1192800.v1.1 MD14G1193100.v1.1
prunus_persica	Prupe.5G185100_v2.0.a1 Prupe.5G185100_v2.0.a1 Prupe.5G185100_v2.0.a1 Prupe.5G185200_v2.0.a1
pyrus_communis	pycom06g16580 pycom14g16040
rosa_chinensis	RchiOBHm_Chr7g0180421 RchiOBHm_Chr7g0180441
rosa_laevigata	RLG00000005265 RLG00000005267
rosa_multiflora	Rmu_sc0003322.1_g000002 Rmu_sc0003526.1_g000001 Rmu_sc0003526.1_g000004
rosa_roxburghii	Rroxscaffold_3G00272870 Rroxscaffold_3G00272900
rosa_rugosa	Rorug06G0433000
rosa_samantha	Rh7AG033600 Rh7AG033700 Rh7BG033600 Rh7BG033700 Rh7CG035500 Rh7CG035600 Rh7DG034000 Rh7DG034200
rosa_wichuraiana	Rw7G002810 Rw7G002820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	692
Acc36I	ACCTGC	1 cut(s)	1520
AccB1I	GGYRCC	2 cut(s)	149, 236
AccB7I	CCANNNNNTGG	2 cut(s)	428, 963
AccI	GTMKAC	1 cut(s)	1779
AccII	CGCG	1 cut(s)	410
AciI	CCGC	2 cut(s)	403, 744
AclWI	GGATC	7 cut(s)	57, 494, 955, 1120, 1171, 1184, 1736
AcoI	YGGCCR	2 cut(s)	430, 1161
AcuI	CTGAAG	2 cut(s)	87, 824
AcyI	GRCGYC	1 cut(s)	689
AfaI	GTAC	3 cut(s)	578, 1046, 1723
AfiI	CCNNNNNNNGG	4 cut(s)	428, 963, 1352, 1584
AflIII	ACRYGT	4 cut(s)	408, 1844, 1909, 1957
AhdI	GACNNNNNGTC	1 cut(s)	1199
AhlI	ACTAGT	1 cut(s)	758
AjiI	CACGTC	1 cut(s)	1958
AjnI	CCWGG	1 cut(s)	1351
AleI	CACNNNNGTG	1 cut(s)	182
Alw21I	GWGCWC	1 cut(s)	700
Alw26I	GTCTC	9 cut(s)	277, 461, 657, 961, 1291, 1303, 1512, 1624, 1948
Alw44I	GTGCAC	1 cut(s)	696
AlwI	GGATC	7 cut(s)	57, 494, 955, 1120, 1171, 1184, 1736
AlwNI	CAGNNNCTG	1 cut(s)	607
Ama87I	CYCGRG	1 cut(s)	1951
AoxI	GGCC	5 cut(s)	418, 430, 491, 1161, 1888
ApaLI	GTGCAC	1 cut(s)	696
AspLEI	GCGC	1 cut(s)	1933
AspS9I	GGNCC	3 cut(s)	370, 419, 1889
AsuHPI	GGTGA	4 cut(s)	46, 577, 1021, 1382
AvaI	CYCGRG	1 cut(s)	1951
AvaII	GGWCC	1 cut(s)	370
BaeGI	GKGCMC	1 cut(s)	700
BalI	TGGCCA	2 cut(s)	432, 1163
BamHI	GGATCC	1 cut(s)	1176
BanI	GGYRCC	2 cut(s)	149, 236
BbsI	GAAGAC	1 cut(s)	1141
Bbv12I	GWGCWC	1 cut(s)	700
BbvCI	CCTCAGC	1 cut(s)	1407
BccI	CCATC	4 cut(s)	84, 384, 938, 1190
BcgI	CGANNNNNNTGC	2 cut(s)	1894, 1928
BciT130I	CCWGG	1 cut(s)	1353
BciVI	GTATCC	1 cut(s)	1676
BcoDI	GTCTC	9 cut(s)	277, 461, 657, 961, 1291, 1303, 1512, 1624, 1948
BcuI	ACTAGT	1 cut(s)	758
BfaI	CTAG	3 cut(s)	137, 759, 812
BfmI	CTRYAG	5 cut(s)	60, 82, 357, 1032, 1329
BfuAI	ACCTGC	1 cut(s)	1520
BfuI	GTATCC	1 cut(s)	1676
BglII	AGATCT	1 cut(s)	1615
Bme1390I	CCNGG	1 cut(s)	1353
Bme18I	GGWCC	1 cut(s)	370
BmeRI	GACNNNNNGTC	1 cut(s)	1199
BmeT110I	CYCGRG	1 cut(s)	1951
BmgBI	CACGTC	1 cut(s)	1958
BmgT120I	GGNCC	3 cut(s)	370, 419, 1889
BmiI	GGNNCC	4 cut(s)	142, 151, 238, 1178
BmrFI	CCNGG	1 cut(s)	1353
BmrI	ACTGGG	2 cut(s)	295, 1734
BmsI	GCATC	5 cut(s)	594, 884, 1145, 1146, 1248
BmuI	ACTGGG	2 cut(s)	295, 1734
BoxI	GACNNNNGTC	1 cut(s)	1960
BpiI	GAAGAC	1 cut(s)	1141
BplI	GAGNNNNNCTC	2 cut(s)	637, 669
Bpu10I	CCTNAGC	1 cut(s)	1407
BpuEI	CTTGAG	1 cut(s)	1564
Bsa29I	ATCGAT	1 cut(s)	1731
BsaAI	YACGTR	1 cut(s)	1845
BsaBI	GATNNNNATC	1 cut(s)	1181
BsaHI	GRCGYC	1 cut(s)	689
BsaI	GGTCTC	3 cut(s)	461, 657, 1512
BsaJI	CCNNGG	4 cut(s)	24, 821, 962, 1351
BsaXI	ACNNNNNCTCC	2 cut(s)	255, 285
Bsc4I	CCNNNNNNNGG	4 cut(s)	428, 963, 1352, 1584
Bse118I	RCCGGY	1 cut(s)	452
Bse1I	ACTGG	6 cut(s)	290, 342, 520, 1270, 1600, 1729
Bse3DI	GCAATG	2 cut(s)	1497, 1695
Bse8I	GATNNNNATC	1 cut(s)	1181
BseBI	CCWGG	1 cut(s)	1353
BseCI	ATCGAT	1 cut(s)	1731
BseDI	CCNNGG	4 cut(s)	24, 821, 962, 1351
BseGI	GGATG	3 cut(s)	95, 376, 1136
BseJI	GATNNNNATC	1 cut(s)	1181
BseLI	CCNNNNNNNGG	4 cut(s)	428, 963, 1352, 1584
BseMI	GCAATG	2 cut(s)	1497, 1695
BseMII	CTCAG	2 cut(s)	1421, 1752
BseNI	ACTGG	6 cut(s)	290, 342, 520, 1270, 1600, 1729
BseSI	GKGCMC	1 cut(s)	700
BseYI	CCCAGC	2 cut(s)	482, 1129
Bsh1236I	CGCG	1 cut(s)	410
BshFI	GGCC	5 cut(s)	420, 432, 493, 1163, 1890
BshNI	GGYRCC	2 cut(s)	149, 236
BshVI	ATCGAT	1 cut(s)	1731
BsiHKAI	GWGCWC	1 cut(s)	700
BsiHKCI	CYCGRG	1 cut(s)	1951
BsiSI	CCGG	2 cut(s)	453, 1610
BslFI	GGGAC	3 cut(s)	348, 1187, 1388
BslI	CCNNNNNNNGG	4 cut(s)	428, 963, 1352, 1584
BsmAI	GTCTC	9 cut(s)	277, 461, 657, 961, 1291, 1303, 1512, 1624, 1948
BsmBI	CGTCTC	2 cut(s)	277, 1948
BsmFI	GGGAC	3 cut(s)	348, 1187, 1388
BsmI	GAATGC	2 cut(s)	666, 1436
BsnI	GGCC	5 cut(s)	420, 432, 493, 1163, 1890
Bso31I	GGTCTC	3 cut(s)	461, 657, 1512
BsoBI	CYCGRG	1 cut(s)	1951
Bsp1286I	GDGCHC	1 cut(s)	700
Bsp143I	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
Bsp19I	CCATGG	3 cut(s)	24, 821, 962
BspACI	CCGC	2 cut(s)	403, 744
BspANI	GGCC	5 cut(s)	420, 432, 493, 1163, 1890
BspCNI	CTCAG	2 cut(s)	1420, 1753
BspDI	ATCGAT	1 cut(s)	1731
BspFNI	CGCG	1 cut(s)	410
BspLI	GGNNCC	4 cut(s)	142, 151, 238, 1178
BspMAI	CTGCAG	2 cut(s)	361, 1036
BspMI	ACCTGC	1 cut(s)	1520
BspPI	GGATC	7 cut(s)	57, 494, 955, 1120, 1171, 1184, 1736
BspQI	GCTCTTC	2 cut(s)	1098, 1308
BspT107I	GGYRCC	2 cut(s)	149, 236
BspTNI	GGTCTC	3 cut(s)	461, 657, 1512
BsrDI	GCAATG	2 cut(s)	1497, 1695
BsrFI	RCCGGY	1 cut(s)	452
BsrI	ACTGG	6 cut(s)	290, 342, 520, 1270, 1600, 1729
BssAI	RCCGGY	1 cut(s)	452
BssECI	CCNNGG	4 cut(s)	24, 821, 962, 1351
BssMI	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
BssNAI	GTATAC	1 cut(s)	1780
BssNI	GRCGYC	1 cut(s)	689
BssT1I	CCWWGG	3 cut(s)	24, 821, 962
Bst1107I	GTATAC	1 cut(s)	1780
Bst2UI	CCWGG	1 cut(s)	1353
Bst4CI	ACNGT	5 cut(s)	11, 184, 304, 595, 1246
Bst6I	CTCTTC	7 cut(s)	63, 707, 1098, 1102, 1308, 1517, 1876
BstACI	GRCGYC	1 cut(s)	689
BstAPI	GCANNNNNTGC	2 cut(s)	411, 1442
BstBAI	YACGTR	1 cut(s)	1845
BstC8I	GCNNGC	4 cut(s)	412, 742, 1161, 1413
BstDEI	CTNAG	2 cut(s)	1407, 1761
BstDSI	CCRYGG	3 cut(s)	24, 821, 962
BstF5I	GGATG	3 cut(s)	95, 376, 1136
BstFNI	CGCG	1 cut(s)	410
BstHHI	GCGC	1 cut(s)	1933
BstKTI	GATC	8 cut(s)	52, 261, 489, 950, 1128, 1179, 1618, 1731
BstMAI	GTCTC	9 cut(s)	277, 461, 657, 961, 1291, 1303, 1512, 1624, 1948
BstMBI	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
BstMWI	GCNNNNNNNGC	7 cut(s)	320, 411, 446, 512, 823, 1427, 1442
BstNI	CCWGG	1 cut(s)	1353
BstNSI	RCATGY	1 cut(s)	1913
BstPAI	GACNNNNGTC	1 cut(s)	1960
BstSCI	CCNGG	1 cut(s)	1351
BstSFI	CTRYAG	5 cut(s)	60, 82, 357, 1032, 1329
BstSLI	GKGCMC	1 cut(s)	700
BstUI	CGCG	1 cut(s)	410
BstV2I	GAAGAC	1 cut(s)	1141
BstX2I	RGATCY	3 cut(s)	1125, 1176, 1615
BstXI	CCANNNNNNTGG	1 cut(s)	166
BstYI	RGATCY	3 cut(s)	1125, 1176, 1615
BstZ17I	GTATAC	1 cut(s)	1780
Bsu15I	ATCGAT	1 cut(s)	1731
BsuI	GTATCC	1 cut(s)	1676
BsuRI	GGCC	5 cut(s)	420, 432, 493, 1163, 1890
BsuTUI	ATCGAT	1 cut(s)	1731
BtgI	CCRYGG	3 cut(s)	24, 821, 962
BtrI	CACGTC	1 cut(s)	1958
BtsCI	GGATG	3 cut(s)	95, 376, 1136
BtsI	GCAGTG	2 cut(s)	354, 1440
BtsIMutI	CAGTG	6 cut(s)	16, 59, 354, 591, 1251, 1440
BveI	ACCTGC	1 cut(s)	1520
Cac8I	GCNNGC	4 cut(s)	412, 742, 1161, 1413
CaiI	CAGNNNCTG	1 cut(s)	607
CfoI	GCGC	1 cut(s)	1933
Cfr10I	RCCGGY	1 cut(s)	452
Cfr13I	GGNCC	3 cut(s)	370, 419, 1889
ClaI	ATCGAT	1 cut(s)	1731
CseI	GACGC	1 cut(s)	1307
Csp6I	GTAC	3 cut(s)	577, 1045, 1722
CviQI	GTAC	3 cut(s)	577, 1045, 1722
DdeI	CTNAG	2 cut(s)	1407, 1761
DpnI	GATC	8 cut(s)	51, 260, 488, 949, 1127, 1178, 1617, 1730
DpnII	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
DriI	GACNNNNNGTC	1 cut(s)	1199
EaeI	YGGCCR	2 cut(s)	430, 1161
Eam1104I	CTCTTC	7 cut(s)	63, 707, 1098, 1102, 1308, 1517, 1876
Eam1105I	GACNNNNNGTC	1 cut(s)	1199
EarI	CTCTTC	7 cut(s)	63, 707, 1098, 1102, 1308, 1517, 1876
Eco130I	CCWWGG	3 cut(s)	24, 821, 962
Eco31I	GGTCTC	3 cut(s)	461, 657, 1512
Eco47I	GGWCC	1 cut(s)	370
Eco57I	CTGAAG	2 cut(s)	87, 824
Eco88I	CYCGRG	1 cut(s)	1951
EcoO109I	RGGNCCY	1 cut(s)	370
EcoRII	CCWGG	1 cut(s)	1351
EcoT14I	CCWWGG	3 cut(s)	24, 821, 962
ErhI	CCWWGG	3 cut(s)	24, 821, 962
Esp3I	CGTCTC	2 cut(s)	277, 1948
FaqI	GGGAC	3 cut(s)	348, 1187, 1388
FblI	GTMKAC	1 cut(s)	1779
FokI	GGATG	3 cut(s)	102, 363, 1123
FspBI	CTAG	3 cut(s)	137, 759, 812
GlaI	GCGC	1 cut(s)	1932
GsaI	CCCAGC	2 cut(s)	486, 1133
HaeIII	GGCC	5 cut(s)	420, 432, 493, 1163, 1890
HapII	CCGG	2 cut(s)	453, 1610
HgaI	GACGC	1 cut(s)	1307
HhaI	GCGC	1 cut(s)	1933
Hin1I	GRCGYC	1 cut(s)	689
Hin6I	GCGC	1 cut(s)	1931
HinP1I	GCGC	1 cut(s)	1931
HincII	GTYRAC	2 cut(s)	559, 687
HindII	GTYRAC	2 cut(s)	559, 687
HindIII	AAGCTT	1 cut(s)	869
HinfI	GANTC	4 cut(s)	555, 1356, 1425, 1668
HpaII	CCGG	2 cut(s)	453, 1610
HphI	GGTGA	4 cut(s)	46, 577, 1021, 1382
Hpy166II	GTNNAC	6 cut(s)	559, 687, 698, 1045, 1570, 1780
Hpy188I	TCNGA	7 cut(s)	263, 277, 461, 681, 893, 1361, 1682
Hpy8I	GTNNAC	6 cut(s)	559, 687, 698, 1045, 1570, 1780
Hpy99I	CGWCG	2 cut(s)	308, 1323
HpyAV	CCTTC	6 cut(s)	598, 799, 1093, 1226, 1317, 1984
HpyCH4III	ACNGT	5 cut(s)	11, 184, 304, 595, 1246
HpyCH4IV	ACGT	4 cut(s)	689, 1773, 1844, 1957
HpyF10VI	GCNNNNNNNGC	7 cut(s)	320, 411, 446, 512, 823, 1427, 1442
HpyF3I	CTNAG	2 cut(s)	1407, 1761
HpySE526I	ACGT	4 cut(s)	689, 1773, 1844, 1957
Hsp92I	GRCGYC	1 cut(s)	689
HspAI	GCGC	1 cut(s)	1931
Kzo9I	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
LguI	GCTCTTC	2 cut(s)	1098, 1308
LmnI	GCTCC	4 cut(s)	140, 263, 476, 512
LweI	GCATC	5 cut(s)	594, 884, 1145, 1146, 1248
MaeI	CTAG	3 cut(s)	137, 759, 812
MaeII	ACGT	4 cut(s)	689, 1773, 1844, 1957
MaeIII	GTNAC	5 cut(s)	497, 916, 1370, 1538, 1840
MalI	GATC	8 cut(s)	51, 260, 488, 949, 1127, 1178, 1617, 1730
MboI	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
MfeI	CAATTG	1 cut(s)	571
MflI	RGATCY	3 cut(s)	1125, 1176, 1615
MhlI	GDGCHC	1 cut(s)	700
MlsI	TGGCCA	2 cut(s)	432, 1163
MluI	ACGCGT	1 cut(s)	408
MluNI	TGGCCA	2 cut(s)	432, 1163
MlyI	GAGTC	3 cut(s)	564, 1419, 1677
MmeI	TCCRAC	4 cut(s)	183, 300, 1087, 1093
Mox20I	TGGCCA	2 cut(s)	432, 1163
MscI	TGGCCA	2 cut(s)	432, 1163
MseI	TTAA	2 cut(s)	789, 1674
MslI	CAYNNNNRTG	4 cut(s)	182, 680, 1074, 1244
Msp20I	TGGCCA	2 cut(s)	432, 1163
MspA1I	CMGCKG	3 cut(s)	482, 744, 1133
MspI	CCGG	2 cut(s)	453, 1610
MspR9I	CCNGG	1 cut(s)	1353
MunI	CAATTG	1 cut(s)	571
Mva1269I	GAATGC	2 cut(s)	666, 1436
MvaI	CCWGG	1 cut(s)	1353
MvnI	CGCG	1 cut(s)	410
MwoI	GCNNNNNNNGC	7 cut(s)	320, 411, 446, 512, 823, 1427, 1442
NcoI	CCATGG	3 cut(s)	24, 821, 962
NdeII	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
NlaIV	GGNNCC	4 cut(s)	142, 151, 238, 1178
NmuCI	GTSAC	2 cut(s)	916, 1370
NspI	RCATGY	1 cut(s)	1913
OliI	CACNNNNGTG	1 cut(s)	182
PciI	ACATGT	1 cut(s)	1909
PciSI	GCTCTTC	2 cut(s)	1098, 1308
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PctI	GAATGC	2 cut(s)	666, 1436
PfeI	GAWTC	1 cut(s)	1356
PflMI	CCANNNNNTGG	2 cut(s)	428, 963
PleI	GAGTC	3 cut(s)	563, 1419, 1676
PpsI	GAGTC	3 cut(s)	563, 1419, 1676
Ppu21I	YACGTR	1 cut(s)	1845
PpuMI	RGGWCCY	1 cut(s)	370
PscI	ACATGT	1 cut(s)	1909
PshAI	GACNNNNGTC	1 cut(s)	1960
Psp5II	RGGWCCY	1 cut(s)	370
Psp6I	CCWGG	1 cut(s)	1351
PspFI	CCCAGC	2 cut(s)	482, 1129
PspGI	CCWGG	1 cut(s)	1351
PspN4I	GGNNCC	4 cut(s)	142, 151, 238, 1178
PspPI	GGNCC	3 cut(s)	370, 419, 1889
PspPPI	RGGWCCY	1 cut(s)	370
PsrI	GAACNNNNNNTAC	2 cut(s)	1763, 1795
PstI	CTGCAG	2 cut(s)	361, 1036
PstNI	CAGNNNCTG	1 cut(s)	607
PsuI	RGATCY	3 cut(s)	1125, 1176, 1615
PvuII	CAGCTG	2 cut(s)	482, 1133
RsaI	GTAC	3 cut(s)	578, 1046, 1723
RsaNI	GTAC	3 cut(s)	577, 1045, 1722
RseI	CAYNNNNRTG	4 cut(s)	182, 680, 1074, 1244
SapI	GCTCTTC	2 cut(s)	1098, 1308
SaqAI	TTAA	2 cut(s)	789, 1674
Sau3AI	GATC	8 cut(s)	49, 258, 486, 947, 1125, 1176, 1615, 1728
Sau96I	GGNCC	3 cut(s)	370, 419, 1889
SchI	GAGTC	3 cut(s)	564, 1419, 1677
ScrFI	CCNGG	1 cut(s)	1353
SduI	GDGCHC	1 cut(s)	700
SfaNI	GCATC	5 cut(s)	594, 884, 1145, 1146, 1248
SfcI	CTRYAG	5 cut(s)	60, 82, 357, 1032, 1329
SinI	GGWCC	1 cut(s)	370
SmiMI	CAYNNNNRTG	4 cut(s)	182, 680, 1074, 1244
SmlI	CTYRAG	1 cut(s)	1543
SmoI	CTYRAG	1 cut(s)	1543
SpeI	ACTAGT	1 cut(s)	758
SsiI	CCGC	2 cut(s)	403, 744
SspMI	CTAG	3 cut(s)	137, 759, 812
StyD4I	CCNGG	1 cut(s)	1351
StyI	CCWWGG	3 cut(s)	24, 821, 962
TaaI	ACNGT	5 cut(s)	11, 184, 304, 595, 1246
TaiI	ACGT	4 cut(s)	692, 1776, 1847, 1960
TaqI	TCGA	5 cut(s)	857, 1122, 1321, 1731, 1752
TaqII	GACCGA	1 cut(s)	1206
TatI	WGTACW	1 cut(s)	1044
TfiI	GAWTC	1 cut(s)	1356
Tru1I	TTAA	2 cut(s)	789, 1674
Tru9I	TTAA	2 cut(s)	789, 1674
TscAI	CASTG	6 cut(s)	16, 59, 361, 598, 1251, 1447
TseFI	GTSAC	2 cut(s)	916, 1370
Tsp45I	GTSAC	2 cut(s)	916, 1370
TspDTI	ATGAA	7 cut(s)	135, 697, 875, 945, 1684, 1818, 1914
TspRI	CASTG	6 cut(s)	16, 59, 361, 598, 1251, 1447
Van91I	CCANNNNNTGG	2 cut(s)	428, 963
VneI	GTGCAC	1 cut(s)	696
VpaK11BI	GGWCC	1 cut(s)	370
XceI	RCATGY	1 cut(s)	1913
XmiI	GTMKAC	1 cut(s)	1779
XspI	CTAG	3 cut(s)	137, 759, 812
ZraI	GACGTC	1 cut(s)	690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.