Prupe.5G185200_v2.0.a1

POT family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15378253 .. 15381155
2903 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G185200.1

Sequence Viewer

Length: 1794 bp
ATGGAAGGAGAAAAAAAGTTCCATGCTACAACAAGCATGGAGAAGAGCAATAATGAGAAGGCTGTGACAAAAGATGAGCCTGAGGTCAAGCACATGGGCATCAAAGCCATGCCCTTTGTTATAGGGAATGAGACCTTTGAGAAGCTAGGAACAATTGGAACCTCATCAAACCTCTTGGTCTATCTCACCACAGTGTTCAACATGAAAAGCATCACAGCTACAACTCTTGTCAATGTGTTCAACGGCACCACCAACTTTGCTACCTTGCTAGGAGCCTTCCTCTGTGACACCTATTTCGGCCGTTACAAGACGCTGGGTTTTGCTTCTGTTGCTTCTTTCCTGGGAATGCTGGTACTAACGCTAACAGCAGCAGTCTCAAAGTTGCATCCTCCAAGCTGTGAACACAATGCCTTATGCACTGATGCAACACCATGGCAACTGGCATTTCTGTTCAGCGGCCTCGGACTTCTTGTTGTGGGAGCTGGTGGCATTAGACCCTGCAACTTAGCCTTTGGTGCAGACCAATTCAATCCCAACACCGAATCAGGAAAGCGGGGCCTCGACAGCTTCTTCAATTGGTACTACTTCACCTTCACTTTTGCCATGATGGTGTCCTTGACAATCATTGTCTATGTGCAATCCAATGTGAGCTGGGCCTGGGGGCTGGCAATCCCTGCATTTATGATGCTCTTGTCATGCGCTCTGTTCTTCATGGGTTCAAGAATTTATGTAAAAGTGAAACCAGAAGGCAGTGCATTGACAAGTGCGGTGAGAGTTACCGTTGCGGCACTCAAGAAGAGGCGGTTGCAGTTACCGGAGCAGCCATGGGTTTCCCTTTTCAACTATGTTCCAACTGGTTCTATCAACTCCAAGATTTCCCACACTGATCAGTTCAGAATCCTAGACAAAGCTGCAATAATTACCAATGAAGACAAAATCAACTTAGATGGATCAACAGCAACTCCATGGAAGCTCTGCAGCCTGCAGGAAGTGGAACAAGTGAAGTGCTTGTTGAGAGTGGTTCCCATTTGGATCTCAACCATTATATACTATGTTGCTATGGTCCAGCAGCAAACTTATACAGTCTTCCAAGCTCTGCAATCTGATAGGCGCCTTGGGAACACAGGCTTCAAGATCCCTGCCGCGTCGTATATAGTCTTTAACATGGTTGCCCTCACAATCTGGATACCAATCTATGACAGGCTCATAGTCCCAGCATTGAGAAGAATGACAGGAAAAGAAGGAGGCATCACAATACTTCAGAAGATGGGCTTTGGCATGGTTCTTGCTATAATAACAATGGTAGTATCTGCAGTGGTTGAAGAGAAGAGAAGAAGCTTGGCTCTCTCACATCCCATTGGGATTGAAGAAAGAAGAGGTGCAATTTCTTCCATGTCTGGATTCTGGTTCATCCCACAACTGGGACTCATTGGACTTTCTGAGGCATTTACAGTGATTGCCCAAGTGGAGTTTTACTACAAGCAAGTCCCAGAAAACATGAGAAGCATTGGGGGTTCTTTTTTGTTTGTTGGCATGGCAATGTCAAATTACTTTAGTAGTGGTTTGGTGTCAATAGTCCACCATACCAGTAAAGGTTCTTCAATGGGGGATTGGTTGCCTGAAGATCTTAACAAGGGGAAGTTGGATTACTTTTACTATATGGTTGCTGCATTGGAGGTTTTGAATTTTGGCTATTTCATTGTTCTTTCTAGGTGGTTTAAGTACAAAGGAAGTGACGACAGTGCCTCTGAAGTTGGGATGGAAAATATGCAATCTCAGAAACATCTTGTTTGA

Protein Analysis

598

Amino Acids

66.29

Weight (kDa)

8.98

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 245, 1110
AccII CGCG 1 cut(s) 1145
AciI CCGC 6 cut(s) 456, 553, 767, 785, 802, 1143
AclWI GGATC 3 cut(s) 958, 1040, 1129
AcoI YGGCCR 1 cut(s) 298
AcsI RAATTY 2 cut(s) 723, 1684
AcuI CTGAAG 3 cut(s) 1244, 1641, 1770
AcyI GRCGYC 1 cut(s) 1111
AfaI GTAC 3 cut(s) 354, 581, 1724
AfiI CCNNNNNNNGG 2 cut(s) 1420, 1421
AjnI CCWGG 2 cut(s) 339, 656
AleI CACNNNNGTG 1 cut(s) 191
Alw26I GTCTC 2 cut(s) 125, 379
AlwI GGATC 3 cut(s) 958, 1040, 1129
AoxI GGCC 4 cut(s) 298, 457, 556, 654
ApeKI GCWGC 6 cut(s) 368, 820, 911, 978, 1069, 1667
ApoI RAATTY 2 cut(s) 723, 1684
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
AspLEI GCGC 2 cut(s) 701, 1113
AspS9I GGNCC 3 cut(s) 556, 654, 1063
AsuHPI GGTGA 3 cut(s) 178, 580, 781
AvaII GGWCC 1 cut(s) 1063
AxyI CCTNAGG 1 cut(s) 81
BanI GGYRCC 2 cut(s) 245, 1110
BarI GAAGNNNNNNTAC 4 cut(s) 1582, 1614, 1631, 1663
BbsI GAAGAC 2 cut(s) 936, 1078
BbvI GCAGC 6 cut(s) 380, 832, 898, 990, 1081, 1654
BccI CCATC 4 cut(s) 601, 941, 1261, 1753
BceAI ACGGC 2 cut(s) 259, 285
BciT130I CCWGG 2 cut(s) 341, 658
BciVI GTATCC 1 cut(s) 1179
BclI TGATCA 1 cut(s) 886
BcoDI GTCTC 2 cut(s) 125, 379
BfaI CTAG 4 cut(s) 146, 269, 902, 1710
BfmI CTRYAG 3 cut(s) 976, 983, 1311
BfoI RGCGCY 1 cut(s) 1114
BfuI GTATCC 1 cut(s) 1179
BglII AGATCT 1 cut(s) 1624
BisI GCNGC 9 cut(s) 369, 457, 786, 821, 912, 979, 1070, 1143, 1668
BlsI GCNGC 9 cut(s) 370, 458, 787, 822, 913, 980, 1071, 1144, 1669
Bme1390I CCNGG 2 cut(s) 341, 658
Bme18I GGWCC 1 cut(s) 1063
BmgT120I GGNCC 3 cut(s) 556, 654, 1063
BmiI GGNNCC 6 cut(s) 160, 247, 274, 557, 1023, 1112
BmrFI CCNGG 2 cut(s) 341, 658
BmrI ACTGGG 1 cut(s) 1430
BmsI GCATC 6 cut(s) 108, 219, 394, 412, 675, 1257
BmuI ACTGGG 1 cut(s) 1430
BpiI GAAGAC 2 cut(s) 936, 1078
BplI GAGNNNNNCTC 2 cut(s) 264, 296
BpuEI CTTGAG 1 cut(s) 776
BsaBI GATNNNNATC 1 cut(s) 1190
BsaHI GRCGYC 1 cut(s) 1111
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 7 cut(s) 340, 431, 460, 657, 824, 965, 1114
BsaWI WCCGGW 1 cut(s) 814
BsaXI ACNNNNNCTCC 2 cut(s) 946, 976
Bsc4I CCNNNNNNNGG 2 cut(s) 1420, 1421
Bse1I ACTGG 4 cut(s) 444, 859, 1425, 1587
Bse21I CCTNAGG 1 cut(s) 81
Bse3DI GCAATG 1 cut(s) 1545
Bse8I GATNNNNATC 1 cut(s) 1190
BseBI CCWGG 2 cut(s) 341, 658
BseDI CCNNGG 7 cut(s) 340, 431, 460, 657, 824, 965, 1114
BseGI GGATG 4 cut(s) 385, 1351, 1410, 1764
BseJI GATNNNNATC 1 cut(s) 1190
BseLI CCNNNNNNNGG 2 cut(s) 1420, 1421
BseMI GCAATG 1 cut(s) 1545
BseMII CTCAG 3 cut(s) 72, 1431, 1790
BseNI ACTGG 4 cut(s) 444, 859, 1425, 1587
BseX3I CGGCCG 1 cut(s) 298
BseXI GCAGC 6 cut(s) 380, 832, 898, 990, 1081, 1654
BseYI CCCAGC 3 cut(s) 313, 651, 1213
BsgI GTGCAG 1 cut(s) 537
Bsh1236I CGCG 1 cut(s) 1145
Bsh1285I CGRYCG 1 cut(s) 301
BshFI GGCC 4 cut(s) 300, 459, 558, 656
BshNI GGYRCC 2 cut(s) 245, 1110
BsiEI CGRYCG 1 cut(s) 301
BsiSI CCGG 1 cut(s) 815
BslFI GGGAC 3 cut(s) 1196, 1437, 1472
BslI CCNNNNNNNGG 2 cut(s) 1420, 1421
BsmAI GTCTC 2 cut(s) 125, 379
BsmFI GGGAC 3 cut(s) 1196, 1437, 1472
BsmI GAATGC 1 cut(s) 351
BsnI GGCC 4 cut(s) 300, 459, 558, 656
Bso31I GGTCTC 1 cut(s) 125
Bsp143I GATC 5 cut(s) 886, 950, 1032, 1134, 1624
Bsp19I CCATGG 3 cut(s) 431, 824, 965
BspACI CCGC 6 cut(s) 456, 553, 767, 785, 802, 1143
BspANI GGCC 4 cut(s) 300, 459, 558, 656
BspCNI CTCAG 3 cut(s) 73, 1432, 1789
BspFNI CGCG 1 cut(s) 1145
BspLI GGNNCC 6 cut(s) 160, 247, 274, 557, 1023, 1112
BspMAI CTGCAG 3 cut(s) 980, 987, 1315
BspPI GGATC 3 cut(s) 958, 1040, 1129
BspQI GCTCTTC 1 cut(s) 38
BspT107I GGYRCC 2 cut(s) 245, 1110
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 1545
BsrI ACTGG 4 cut(s) 444, 859, 1425, 1587
BssECI CCNNGG 7 cut(s) 340, 431, 460, 657, 824, 965, 1114
BssMI GATC 5 cut(s) 886, 950, 1032, 1134, 1624
BssNI GRCGYC 1 cut(s) 1111
BssT1I CCWWGG 4 cut(s) 431, 824, 965, 1114
Bst2UI CCWGG 2 cut(s) 341, 658
Bst4CI ACNGT 5 cut(s) 193, 781, 1084, 1453, 1742
Bst6I CTCTTC 5 cut(s) 38, 791, 1317, 1322, 1369
BstACI GRCGYC 1 cut(s) 1111
BstAPI GCANNNNNTGC 1 cut(s) 674
BstC8I GCNNGC 2 cut(s) 666, 983
BstDEI CTNAG 5 cut(s) 81, 505, 943, 1440, 1776
BstDSI CCRYGG 3 cut(s) 431, 824, 965
BstF5I GGATG 4 cut(s) 385, 1351, 1410, 1764
BstFNI CGCG 1 cut(s) 1145
BstH2I RGCGCY 1 cut(s) 1114
BstHHI GCGC 2 cut(s) 701, 1113
BstKTI GATC 5 cut(s) 889, 953, 1035, 1137, 1627
BstMAI GTCTC 2 cut(s) 125, 379
BstMBI GATC 5 cut(s) 886, 950, 1032, 1134, 1624
BstMCI CGRYCG 1 cut(s) 301
BstMWI GCNNNNNNNGC 4 cut(s) 329, 515, 564, 674
BstNI CCWGG 2 cut(s) 341, 658
BstSCI CCNGG 2 cut(s) 339, 656
BstSFI CTRYAG 3 cut(s) 976, 983, 1311
BstUI CGCG 1 cut(s) 1145
BstV1I GCAGC 6 cut(s) 380, 832, 898, 990, 1081, 1654
BstV2I GAAGAC 2 cut(s) 936, 1078
BstX2I RGATCY 3 cut(s) 1032, 1134, 1624
BstYI RGATCY 3 cut(s) 1032, 1134, 1624
BstZI CGGCCG 1 cut(s) 298
Bsu36I CCTNAGG 1 cut(s) 81
BsuI GTATCC 1 cut(s) 1179
BsuRI GGCC 4 cut(s) 300, 459, 558, 656
BtgI CCRYGG 3 cut(s) 431, 824, 965
BtsCI GGATG 4 cut(s) 385, 1351, 1410, 1764
BtsI GCAGTG 2 cut(s) 757, 1320
BtsIMutI CAGTG 7 cut(s) 198, 417, 757, 882, 1320, 1458, 1747
Cac8I GCNNGC 2 cut(s) 666, 983
CfoI GCGC 2 cut(s) 701, 1113
Cfr13I GGNCC 3 cut(s) 556, 654, 1063
CseI GACGC 2 cut(s) 319, 1134
Csp6I GTAC 3 cut(s) 353, 580, 1723
CspCI CAANNNNNGTGG 2 cut(s) 238, 273
CviQI GTAC 3 cut(s) 353, 580, 1723
DdeI CTNAG 5 cut(s) 81, 505, 943, 1440, 1776
DinI GGCGCC 1 cut(s) 1112
DpnI GATC 5 cut(s) 888, 952, 1034, 1136, 1626
DpnII GATC 5 cut(s) 886, 950, 1032, 1134, 1624
EaeI YGGCCR 1 cut(s) 298
EagI CGGCCG 1 cut(s) 298
Eam1104I CTCTTC 5 cut(s) 38, 791, 1317, 1322, 1369
EarI CTCTTC 5 cut(s) 38, 791, 1317, 1322, 1369
EclXI CGGCCG 1 cut(s) 298
Eco130I CCWWGG 4 cut(s) 431, 824, 965, 1114
Eco31I GGTCTC 1 cut(s) 125
Eco47I GGWCC 1 cut(s) 1063
Eco52I CGGCCG 1 cut(s) 298
Eco57I CTGAAG 3 cut(s) 1244, 1641, 1770
Eco81I CCTNAGG 1 cut(s) 81
EcoO109I RGGNCCY 1 cut(s) 556
EcoRII CCWGG 2 cut(s) 339, 656
EcoT14I CCWWGG 4 cut(s) 431, 824, 965, 1114
EgeI GGCGCC 1 cut(s) 1112
EheI GGCGCC 1 cut(s) 1112
ErhI CCWWGG 4 cut(s) 431, 824, 965, 1114
FalI AAGNNNNNCTT 2 cut(s) 1256, 1288
FaqI GGGAC 3 cut(s) 1196, 1437, 1472
FauI CCCGC 1 cut(s) 546
FbaI TGATCA 1 cut(s) 886
Fnu4HI GCNGC 9 cut(s) 369, 457, 786, 821, 912, 979, 1070, 1143, 1668
FokI GGATG 4 cut(s) 372, 1338, 1397, 1771
Fsp4HI GCNGC 9 cut(s) 369, 457, 786, 821, 912, 979, 1070, 1143, 1668
FspBI CTAG 4 cut(s) 146, 269, 902, 1710
GlaI GCGC 2 cut(s) 700, 1112
GluI GCNGC 9 cut(s) 369, 457, 786, 821, 912, 979, 1070, 1143, 1668
GsaI CCCAGC 3 cut(s) 317, 655, 1217
HaeII RGCGCY 1 cut(s) 1114
HaeIII GGCC 4 cut(s) 300, 459, 558, 656
HapII CCGG 1 cut(s) 815
HgaI GACGC 2 cut(s) 319, 1134
HhaI GCGC 2 cut(s) 701, 1113
Hin1I GRCGYC 1 cut(s) 1111
Hin6I GCGC 2 cut(s) 699, 1111
HinP1I GCGC 2 cut(s) 699, 1111
HindIII AAGCTT 1 cut(s) 1336
HinfI GANTC 4 cut(s) 542, 897, 1401, 1425
HpaII CCGG 1 cut(s) 815
HphI GGTGA 3 cut(s) 178, 580, 781
Hpy166II GTNNAC 2 cut(s) 401, 1579
Hpy188I TCNGA 7 cut(s) 464, 896, 1105, 1263, 1441, 1750, 1779
Hpy188III TCNNGA 6 cut(s) 546, 720, 793, 1132, 1183, 1398
Hpy8I GTNNAC 2 cut(s) 401, 1579
Hpy99I CGWCG 1 cut(s) 1150
HpyAV CCTTC 5 cut(s) 52, 286, 601, 740, 1235
HpyCH4III ACNGT 5 cut(s) 193, 781, 1084, 1453, 1742
HpyF10VI GCNNNNNNNGC 4 cut(s) 329, 515, 564, 674
HpyF3I CTNAG 5 cut(s) 81, 505, 943, 1440, 1776
Hsp92I GRCGYC 1 cut(s) 1111
HspAI GCGC 2 cut(s) 699, 1111
KasI GGCGCC 1 cut(s) 1110
Ksp22I TGATCA 1 cut(s) 886
Kzo9I GATC 5 cut(s) 886, 950, 1032, 1134, 1624
LguI GCTCTTC 1 cut(s) 38
LmnI GCTCC 3 cut(s) 272, 479, 817
Lsp1109I GCAGC 6 cut(s) 380, 832, 898, 990, 1081, 1654
LweI GCATC 6 cut(s) 108, 219, 394, 412, 675, 1257
MaeI CTAG 4 cut(s) 146, 269, 902, 1710
MaeIII GTNAC 6 cut(s) 64, 284, 302, 775, 810, 1733
MalI GATC 5 cut(s) 888, 952, 1034, 1136, 1626
MboI GATC 5 cut(s) 886, 950, 1032, 1134, 1624
MfeI CAATTG 2 cut(s) 153, 574
MflI RGATCY 3 cut(s) 1032, 1134, 1624
MluCI AATT 8 cut(s) 153, 524, 574, 723, 918, 1383, 1546, 1684
Mly113I GGCGCC 1 cut(s) 1111
MlyI GAGTC 1 cut(s) 1419
MmeI TCCRAC 2 cut(s) 875, 1623
MseI TTAA 3 cut(s) 1161, 1629, 1719
MslI CAYNNNNRTG 3 cut(s) 191, 608, 1538
MspA1I CMGCKG 1 cut(s) 456
MspI CCGG 1 cut(s) 815
MspR9I CCNGG 2 cut(s) 341, 658
MunI CAATTG 2 cut(s) 153, 574
Mva1269I GAATGC 1 cut(s) 351
MvaI CCWGG 2 cut(s) 341, 658
MvnI CGCG 1 cut(s) 1145
MwoI GCNNNNNNNGC 4 cut(s) 329, 515, 564, 674
NarI GGCGCC 1 cut(s) 1111
NcoI CCATGG 3 cut(s) 431, 824, 965
NdeII GATC 5 cut(s) 886, 950, 1032, 1134, 1624
NlaIV GGNNCC 6 cut(s) 160, 247, 274, 557, 1023, 1112
NmuCI GTSAC 3 cut(s) 64, 284, 1733
OliI CACNNNNGTG 1 cut(s) 191
PciSI GCTCTTC 1 cut(s) 38
PctI GAATGC 1 cut(s) 351
PfeI GAWTC 3 cut(s) 542, 897, 1401
PkrI GCNGC 9 cut(s) 370, 458, 787, 822, 913, 980, 1071, 1144, 1669
PleI GAGTC 1 cut(s) 1419
PluTI GGCGCC 1 cut(s) 1114
PpsI GAGTC 1 cut(s) 1419
Psp6I CCWGG 2 cut(s) 339, 656
PspFI CCCAGC 3 cut(s) 313, 651, 1213
PspGI CCWGG 2 cut(s) 339, 656
PspN4I GGNNCC 6 cut(s) 160, 247, 274, 557, 1023, 1112
PspPI GGNCC 3 cut(s) 556, 654, 1063
PstI CTGCAG 3 cut(s) 980, 987, 1315
PsuI RGATCY 3 cut(s) 1032, 1134, 1624
RsaI GTAC 3 cut(s) 354, 581, 1724
RsaNI GTAC 3 cut(s) 353, 580, 1723
RseI CAYNNNNRTG 3 cut(s) 191, 608, 1538
SapI GCTCTTC 1 cut(s) 38
SaqAI TTAA 3 cut(s) 1161, 1629, 1719
SatI GCNGC 9 cut(s) 369, 457, 786, 821, 912, 979, 1070, 1143, 1668
Sau3AI GATC 5 cut(s) 886, 950, 1032, 1134, 1624
Sau96I GGNCC 3 cut(s) 556, 654, 1063
SbfI CCTGCAGG 1 cut(s) 987
SchI GAGTC 1 cut(s) 1419
ScrFI CCNGG 2 cut(s) 341, 658
SdaI CCTGCAGG 1 cut(s) 987
SfaNI GCATC 6 cut(s) 108, 219, 394, 412, 675, 1257
SfcI CTRYAG 3 cut(s) 976, 983, 1311
SfoI GGCGCC 1 cut(s) 1112
SinI GGWCC 1 cut(s) 1063
SmiMI CAYNNNNRTG 3 cut(s) 191, 608, 1538
SmlI CTYRAG 1 cut(s) 791
SmoI CTYRAG 1 cut(s) 791
Sse8387I CCTGCAGG 1 cut(s) 987
Sse9I AATT 8 cut(s) 153, 524, 574, 723, 918, 1383, 1546, 1684
SsiI CCGC 6 cut(s) 456, 553, 767, 785, 802, 1143
SspDI GGCGCC 1 cut(s) 1110
SspMI CTAG 4 cut(s) 146, 269, 902, 1710
StyD4I CCNGG 2 cut(s) 339, 656
StyI CCWWGG 4 cut(s) 431, 824, 965, 1114
TaaI ACNGT 5 cut(s) 193, 781, 1084, 1453, 1742
TaqI TCGA 1 cut(s) 561
TasI AATT 8 cut(s) 153, 524, 574, 723, 918, 1383, 1546, 1684
TatI WGTACW 1 cut(s) 1722
TauI GCSGC 3 cut(s) 459, 788, 1145
TfiI GAWTC 3 cut(s) 542, 897, 1401
Tru1I TTAA 3 cut(s) 1161, 1629, 1719
Tru9I TTAA 3 cut(s) 1161, 1629, 1719
TscAI CASTG 7 cut(s) 198, 424, 757, 889, 1320, 1458, 1747
TseFI GTSAC 3 cut(s) 64, 284, 1733
TseI GCWGC 6 cut(s) 368, 820, 911, 978, 1069, 1667
Tsp45I GTSAC 3 cut(s) 64, 284, 1733
TspDTI ATGAA 5 cut(s) 218, 700, 942, 1399, 1687
TspRI CASTG 7 cut(s) 198, 424, 757, 889, 1320, 1458, 1747
VpaK11BI GGWCC 1 cut(s) 1063
XapI RAATTY 2 cut(s) 723, 1684
XspI CTAG 4 cut(s) 146, 269, 902, 1710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.