Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008493

Physical Location & Seq

Genomic Coordinates Reverse (-)

25392920 .. 25394907

Gene Structure 1988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G63400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 741 bp

ATGGCGACCGGTGGTGCTGCGGCGGATTTGGAAGATGTTCAGACGGTGGATCTCATGTCGGAGCTCCTCCGCCGCCTCAAGTGTTCTCAGAAGCCCGACAAACGCCTCATCTTCATTGGACCTCCAGGGTCAGGGAAAGGTACTCAATCTCCAGTAGTGAAGGATGAGTATTGCTTGTGTCACTTATCCACTGGAGACATGTTAAGAGCTGCTGTTGCTTCTAAGACCCCTCTTGGTGTCAAGGCTAAAGAAGCTATGGAAAAAGGAGAGCTCGTCTCTGATGATTTGGTTGTTGGTATAATTGATGAAGCCATGAACAAGCCAAAATGTCAAAAAGGATTTATCCTTGATGGGTTCCCCAGGACTGTTACTCAGGCAGAGAAGCTCGATGAGATGCTTAAGAGGCGAGGAACTGAAATTGACAAAGTTCTCAACTTTGCTATTGATGACGCAATCTTGGAGGAAAGAATAACCGGGCGATGGATCCACCCATCGAGTGGCAGGAGTTACCACACCAAATTTGCTCCTCCCAAAACCCCTGGAGTTGATGATATTACTGGAGAGCCTCTGATCCAACGTAAAGATGATAACGCTGATGTTCTAAAGTCGAGGCTTGCAGCTTTCCACAGTCAAACTCAACCGGTGATTGATTACTACGCAAAGAAGGCCGTTCTCACAAACATCCAGGCCGAGAAGGCTCCCCAAGAAGTTACATCAGAGGTTAAAAAAGCATTGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004017 GO:0005488 GO:0005507 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0017076 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0030554 GO:0031090 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046872 GO:0046914 GO:0046940 GO:0050145 GO:0050896 GO:0055086 GO:0071704 GO:0072521 GO:0090407 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK ADK_lid

Protein Analysis

246

Amino Acids

26.93

Weight (kDa)

6.91

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADK	PF00406	39 - 159	3.4e-49	Adenylate kinase
AAA_17	PF13207	39 - 159	3.8e-27	AAA domain
ADK_lid	PF05191	160 - 184	3.6e-09	Adenylate kinase, active site lid

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50370 AT5G50370 AT5G63400 AT5G63400
fragaria_vesca	FvH4_5g07870
malus_domestica	MD06G1145300.v1.1 MD14G1160000.v1.1
prunus_persica	Prupe.5G153600_v2.0.a1 Prupe.5G153600_v2.0.a1
pyrus_communis	pycom06g13460 pycom14g13350
rosa_chinensis	RchiOBHm_Chr7g0190591
rosa_laevigata	RLG00000004512
rosa_multiflora	Rmu_co8305173.1_g000001 Rmu_sc0006709.1_g000012
rosa_roxburghii	Rroxscaffold_3G00264480
rosa_rugosa	Rorug06G0505500 Rorug06G0505600
rosa_samantha	Rh7AG112100 Rh7BG114900
rosa_wichuraiana	Rw4G010280 Rw7G009780 Rw7G039730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	497
AciI	CCGC	4 cut(s)	20, 23, 70, 73
AclWI	GGATC	4 cut(s)	57, 478, 491, 565
AcsI	RAATTY	1 cut(s)	518
AfaI	GTAC	1 cut(s)	142
AfiI	CCNNNNNNNGG	3 cut(s)	131, 480, 497
AflII	CTTAAG	1 cut(s)	398
AflIII	ACRYGT	1 cut(s)	198
AgeI	ACCGGT	2 cut(s)	8, 640
AjnI	CCWGG	4 cut(s)	124, 359, 538, 684
AluBI	AGCT	6 cut(s)	64, 209, 254, 271, 385, 620
AluI	AGCT	6 cut(s)	64, 209, 254, 271, 385, 620
Alw21I	GWGCWC	2 cut(s)	66, 273
Alw26I	GTCTC	2 cut(s)	189, 280
AlwI	GGATC	4 cut(s)	57, 478, 491, 565
AoxI	GGCC	2 cut(s)	666, 687
ApeKI	GCWGC	3 cut(s)	17, 209, 617
ApoI	RAATTY	1 cut(s)	518
AsiGI	ACCGGT	2 cut(s)	8, 640
Asp700I	GAANNNNTTC	1 cut(s)	36
AspS9I	GGNCC	1 cut(s)	119
AsuC2I	CCSGG	1 cut(s)	475
AsuHPI	GGTGA	1 cut(s)	655
AvaII	GGWCC	1 cut(s)	119
BamHI	GGATCC	1 cut(s)	483
BanII	GRGCYC	2 cut(s)	66, 273
Bbv12I	GWGCWC	2 cut(s)	66, 273
BbvI	GCAGC	3 cut(s)	4, 196, 629
BccI	CCATC	3 cut(s)	344, 474, 499
BceAI	ACGGC	1 cut(s)	653
BciT130I	CCWGG	4 cut(s)	126, 361, 540, 686
BcnI	CCSGG	1 cut(s)	475
BcoDI	GTCTC	2 cut(s)	189, 280
BfrI	CTTAAG	1 cut(s)	398
BglI	GCCNNNNNGGC	1 cut(s)	695
BisI	GCNGC	5 cut(s)	18, 21, 73, 210, 618
BlsI	GCNGC	5 cut(s)	19, 22, 74, 211, 619
Bme1390I	CCNGG	5 cut(s)	126, 361, 475, 540, 686
Bme18I	GGWCC	1 cut(s)	119
BmgT120I	GGNCC	1 cut(s)	119
BmiI	GGNNCC	3 cut(s)	356, 485, 699
BmrFI	CCNGG	5 cut(s)	126, 361, 475, 540, 686
BmsI	GCATC	1 cut(s)	384
BplI	GAGNNNNNCTC	2 cut(s)	260, 292
BpmI	CTGGAG	5 cut(s)	108, 135, 213, 561, 579
BpuEI	CTTGAG	1 cut(s)	62
BpuMI	CCSGG	1 cut(s)	475
BsaJI	CCNNGG	3 cut(s)	125, 359, 538
BsaWI	WCCGGW	2 cut(s)	8, 640
BsaXI	ACNNNNNCTCC	4 cut(s)	133, 163, 258, 288
Bsc4I	CCNNNNNNNGG	3 cut(s)	131, 480, 497
Bse118I	RCCGGY	2 cut(s)	8, 640
Bse1I	ACTGG	3 cut(s)	152, 196, 562
BseBI	CCWGG	4 cut(s)	126, 361, 540, 686
BseDI	CCNNGG	3 cut(s)	125, 359, 538
BseGI	GGATG	2 cut(s)	169, 681
BseLI	CCNNNNNNNGG	3 cut(s)	131, 480, 497
BseMII	CTCAG	2 cut(s)	101, 386
BseNI	ACTGG	3 cut(s)	152, 196, 562
BseRI	GAGGAG	2 cut(s)	56, 516
BseXI	GCAGC	3 cut(s)	4, 196, 629
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	2 cut(s)	668, 689
BshTI	ACCGGT	2 cut(s)	8, 640
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	66, 273
BsiSI	CCGG	3 cut(s)	9, 474, 641
BslI	CCNNNNNNNGG	3 cut(s)	131, 480, 497
BsmAI	GTCTC	2 cut(s)	189, 280
BsmBI	CGTCTC	1 cut(s)	280
BsnI	GGCC	2 cut(s)	668, 689
Bsp1286I	GDGCHC	2 cut(s)	66, 273
Bsp143I	GATC	3 cut(s)	49, 483, 570
BspACI	CCGC	4 cut(s)	20, 23, 70, 73
BspANI	GGCC	2 cut(s)	668, 689
BspCNI	CTCAG	2 cut(s)	100, 385
BspHI	TCATGA	1 cut(s)	737
BspLI	GGNNCC	3 cut(s)	356, 485, 699
BspPI	GGATC	4 cut(s)	57, 478, 491, 565
BspTI	CTTAAG	1 cut(s)	398
BsrFI	RCCGGY	2 cut(s)	8, 640
BsrI	ACTGG	3 cut(s)	152, 196, 562
BssAI	RCCGGY	2 cut(s)	8, 640
BssECI	CCNNGG	3 cut(s)	125, 359, 538
BssMI	GATC	3 cut(s)	49, 483, 570
Bst2UI	CCWGG	4 cut(s)	126, 361, 540, 686
Bst4CI	ACNGT	3 cut(s)	46, 367, 629
BstAFI	CTTAAG	1 cut(s)	398
BstC8I	GCNNGC	1 cut(s)	615
BstDEI	CTNAG	3 cut(s)	87, 222, 372
BstF5I	GGATG	2 cut(s)	169, 681
BstKTI	GATC	3 cut(s)	52, 486, 573
BstMAI	GTCTC	2 cut(s)	189, 280
BstMBI	GATC	3 cut(s)	49, 483, 570
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	5 cut(s)	215, 251, 403, 665, 695
BstNI	CCWGG	4 cut(s)	126, 361, 540, 686
BstNSI	RCATGY	1 cut(s)	202
BstSCI	CCNGG	5 cut(s)	124, 359, 473, 538, 684
BstV1I	GCAGC	3 cut(s)	4, 196, 629
BstX2I	RGATCY	2 cut(s)	49, 483
BstYI	RGATCY	2 cut(s)	49, 483
BsuRI	GGCC	2 cut(s)	668, 689
BtgZI	GCGATG	1 cut(s)	493
BtsCI	GGATG	2 cut(s)	169, 681
BtsIMutI	CAGTG	1 cut(s)	189
Cac8I	GCNNGC	1 cut(s)	615
CciI	TCATGA	1 cut(s)	737
Cfr10I	RCCGGY	2 cut(s)	8, 640
Cfr13I	GGNCC	1 cut(s)	119
CseI	GACGC	1 cut(s)	458
Csp6I	GTAC	1 cut(s)	141
CspAI	ACCGGT	2 cut(s)	8, 640
CviAII	CATG	4 cut(s)	55, 199, 313, 738
CviQI	GTAC	1 cut(s)	141
DdeI	CTNAG	3 cut(s)	87, 222, 372
DpnI	GATC	3 cut(s)	51, 485, 572
DpnII	GATC	3 cut(s)	49, 483, 570
EciI	GGCGGA	2 cut(s)	38, 59
Ecl136II	GAGCTC	2 cut(s)	64, 271
Eco24I	GRGCYC	2 cut(s)	66, 273
Eco47I	GGWCC	1 cut(s)	119
Eco53kI	GAGCTC	2 cut(s)	64, 271
EcoICRI	GAGCTC	2 cut(s)	64, 271
EcoRII	CCWGG	4 cut(s)	124, 359, 538, 684
EcoT38I	GRGCYC	2 cut(s)	66, 273
Esp3I	CGTCTC	1 cut(s)	280
FaeI	CATG	4 cut(s)	58, 202, 316, 741
FaiI	YATR	6 cut(s)	56, 200, 257, 299, 314, 739
FatI	CATG	4 cut(s)	54, 198, 312, 737
Fnu4HI	GCNGC	5 cut(s)	18, 21, 73, 210, 618
FokI	GGATG	2 cut(s)	176, 668
FriOI	GRGCYC	2 cut(s)	66, 273
Fsp4HI	GCNGC	5 cut(s)	18, 21, 73, 210, 618
GluI	GCNGC	5 cut(s)	18, 21, 73, 210, 618
GsuI	CTGGAG	5 cut(s)	108, 135, 213, 561, 579
HaeIII	GGCC	2 cut(s)	668, 689
HapII	CCGG	3 cut(s)	9, 474, 641
HgaI	GACGC	1 cut(s)	458
Hin1II	CATG	4 cut(s)	58, 202, 316, 741
HpaII	CCGG	3 cut(s)	9, 474, 641
HphI	GGTGA	1 cut(s)	655
Hpy188I	TCNGA	6 cut(s)	42, 61, 90, 280, 570, 718
Hpy188III	TCNNGA	1 cut(s)	738
HpyAV	CCTTC	3 cut(s)	154, 658, 688
HpyCH4III	ACNGT	3 cut(s)	46, 367, 629
HpyCH4IV	ACGT	1 cut(s)	577
HpyCH4V	TGCA	1 cut(s)	617
HpyF10VI	GCNNNNNNNGC	5 cut(s)	215, 251, 403, 665, 695
HpyF3I	CTNAG	3 cut(s)	87, 222, 372
HpySE526I	ACGT	1 cut(s)	577
Hsp92II	CATG	4 cut(s)	58, 202, 316, 741
Kzo9I	GATC	3 cut(s)	49, 483, 570
LmnI	GCTCC	4 cut(s)	61, 69, 529, 703
Lsp1109I	GCAGC	3 cut(s)	4, 196, 629
LweI	GCATC	1 cut(s)	384
MaeII	ACGT	1 cut(s)	577
MaeIII	GTNAC	4 cut(s)	179, 367, 506, 709
MalI	GATC	3 cut(s)	51, 485, 572
MboI	GATC	3 cut(s)	49, 483, 570
MboII	GAAGA	2 cut(s)	44, 103
MflI	RGATCY	2 cut(s)	49, 483
MhlI	GDGCHC	2 cut(s)	66, 273
MluCI	AATT	3 cut(s)	300, 417, 518
MmeI	TCCRAC	2 cut(s)	39, 598
MroXI	GAANNNNTTC	1 cut(s)	36
MseI	TTAA	3 cut(s)	203, 399, 723
MslI	CAYNNNNRTG	1 cut(s)	736
MspCI	CTTAAG	1 cut(s)	398
MspI	CCGG	3 cut(s)	9, 474, 641
MspR9I	CCNGG	5 cut(s)	126, 361, 475, 540, 686
MvaI	CCWGG	4 cut(s)	126, 361, 540, 686
MwoI	GCNNNNNNNGC	5 cut(s)	215, 251, 403, 665, 695
NciI	CCSGG	1 cut(s)	475
NdeII	GATC	3 cut(s)	49, 483, 570
NlaIII	CATG	4 cut(s)	58, 202, 316, 741
NlaIV	GGNNCC	3 cut(s)	356, 485, 699
NmeAIII	GCCGAG	1 cut(s)	715
NmuCI	GTSAC	1 cut(s)	179
NspI	RCATGY	1 cut(s)	202
PagI	TCATGA	1 cut(s)	737
PciI	ACATGT	1 cut(s)	198
PdmI	GAANNNNTTC	1 cut(s)	36
PflMI	CCANNNNNTGG	1 cut(s)	497
PinAI	ACCGGT	2 cut(s)	8, 640
PkrI	GCNGC	5 cut(s)	19, 22, 74, 211, 619
PscI	ACATGT	1 cut(s)	198
Psp124BI	GAGCTC	2 cut(s)	66, 273
Psp6I	CCWGG	4 cut(s)	124, 359, 538, 684
PspGI	CCWGG	4 cut(s)	124, 359, 538, 684
PspN4I	GGNNCC	3 cut(s)	356, 485, 699
PspPI	GGNCC	1 cut(s)	119
PsuI	RGATCY	2 cut(s)	49, 483
RsaI	GTAC	1 cut(s)	142
RsaNI	GTAC	1 cut(s)	141
RseI	CAYNNNNRTG	1 cut(s)	736
SacI	GAGCTC	2 cut(s)	66, 273
SaqAI	TTAA	3 cut(s)	203, 399, 723
SatI	GCNGC	5 cut(s)	18, 21, 73, 210, 618
Sau3AI	GATC	3 cut(s)	49, 483, 570
Sau96I	GGNCC	1 cut(s)	119
ScrFI	CCNGG	5 cut(s)	126, 361, 475, 540, 686
SduI	GDGCHC	2 cut(s)	66, 273
SfaNI	GCATC	1 cut(s)	384
SinI	GGWCC	1 cut(s)	119
SmiMI	CAYNNNNRTG	1 cut(s)	736
SmlI	CTYRAG	2 cut(s)	77, 398
SmoI	CTYRAG	2 cut(s)	77, 398
Sse9I	AATT	3 cut(s)	300, 417, 518
SsiI	CCGC	4 cut(s)	20, 23, 70, 73
SstI	GAGCTC	2 cut(s)	66, 273
StyD4I	CCNGG	5 cut(s)	124, 359, 473, 538, 684
TaaI	ACNGT	3 cut(s)	46, 367, 629
TaiI	ACGT	1 cut(s)	580
TaqI	TCGA	3 cut(s)	387, 494, 608
TasI	AATT	3 cut(s)	300, 417, 518
TauI	GCSGC	2 cut(s)	23, 75
Tru1I	TTAA	3 cut(s)	203, 399, 723
Tru9I	TTAA	3 cut(s)	203, 399, 723
TscAI	CASTG	1 cut(s)	196
TseFI	GTSAC	1 cut(s)	179
TseI	GCWGC	3 cut(s)	17, 209, 617
Tsp45I	GTSAC	1 cut(s)	179
TspDTI	ATGAA	3 cut(s)	103, 321, 329
TspRI	CASTG	1 cut(s)	196
Van91I	CCANNNNNTGG	1 cut(s)	497
Vha464I	CTTAAG	1 cut(s)	398
VpaK11BI	GGWCC	1 cut(s)	119
XapI	RAATTY	1 cut(s)	518
XceI	RCATGY	1 cut(s)	202
XcmI	CCANNNNNNNNNTGG	1 cut(s)	494
XmnI	GAANNNNTTC	1 cut(s)	36

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.