Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0008493

Physical Location & Seq

Genomic Coordinates Forward (+)

25389211 .. 25392056

Gene Structure 2846 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1160000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGGCGGGCAGCTCCGCGGTAGCAGCGAACCTGGAAGATGTGCCCTCCGTCGATCTCATGACCGAGCTCCTCCGCCGCATGAAATGCTCCACCAAGGCCGACAAGCGCCTCATTCTCATCGGCCCACCCGGATCAGGGAAAGGTACCCAATCACCTATAATTAAGGATGACTATTGCTTGTGCCACTTGGCTACTGGTGATATGTTGAGAGCCGCTGTTTCTGCTAAGACTCCTCTTGGGGTTAAAGCTAAAGAGGCTATGGATAAGGGAGAGCTTGTTTCCGATGACTTGGTTGTTGGCATCATAGATGAAGCAATGAAGAAGCCTTCATGTCAGAAAGGTTTCATTCTTGATGGATTTCCAAGGACTGTGGTCCAAGCAGAGAAGCTAGATGAGATGCTGAAAAAGCAGGGAGCTAAGATTGATAAGGTGCTCAACTTTGCAGTTGATGATGCAATCTTGGAAGAGAGGATTACTGGTCGCTGGATACACCCATCCAGTGGTAGATCCTACCACACGAAATTTGCGCCACCCAAGGCACCTGGTGTTGATGATGTAACTGGAGAACCTTTGATTCAACGTAAGGATGATACTGCAGCAGTTCTCAAGTCAAGGCTGGAAGCATTTCACAAGCAAACTGAACCGGTTATTGGCTATTATTCCCAGAAAGGCATTGTTGCCAATCTTCAAGCGGAGAAACCTCCTCAAGAGGTCACTTCCGAGGTTCATAAAGTGCTCTCGTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004017 GO:0005488 GO:0005524 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0017076 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046483 GO:0046940 GO:0050145 GO:0055086 GO:0071704 GO:0072521 GO:0090407 GO:0097159 GO:0097367 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK ADK_lid

Protein Analysis

249

Amino Acids

26.86

Weight (kDa)

7.65

Isoelectric Point (pI)

40.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADK	PF00406	39 - 224	1.5e-59	Adenylate kinase
AAA_17	PF13207	40 - 160	6.6e-26	AAA domain
ADK_lid	PF05191	161 - 196	5e-17	Adenylate kinase, active site lid

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50370 AT5G50370 AT5G63400 AT5G63400
fragaria_vesca	FvH4_5g07870
malus_domestica	MD06G1145300.v1.1 MD14G1160000.v1.1
prunus_persica	Prupe.5G153600_v2.0.a1 Prupe.5G153600_v2.0.a1
pyrus_communis	pycom06g13460 pycom14g13350
rosa_chinensis	RchiOBHm_Chr7g0190591
rosa_laevigata	RLG00000004512
rosa_multiflora	Rmu_co8305173.1_g000001 Rmu_sc0006709.1_g000012
rosa_roxburghii	Rroxscaffold_3G00264480
rosa_rugosa	Rorug06G0505500 Rorug06G0505600
rosa_samantha	Rh7AG112100 Rh7BG114900
rosa_wichuraiana	Rw4G010280 Rw7G009780 Rw7G039730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	143
AccB1I	GGYRCC	2 cut(s)	143, 538
AccB7I	CCANNNNNTGG	1 cut(s)	500
AccII	CGCG	1 cut(s)	17
AciI	CCGC	7 cut(s)	5, 15, 17, 73, 76, 213, 692
AclWI	GGATC	2 cut(s)	139, 501
AcsI	RAATTY	1 cut(s)	521
AdeI	CACNNNGTG	1 cut(s)	545
AfaI	GTAC	1 cut(s)	145
AfiI	CCNNNNNNNGG	4 cut(s)	134, 135, 500, 650
AgeI	ACCGGT	1 cut(s)	643
AgsI	TTSAA	2 cut(s)	578, 689
AjnI	CCWGG	2 cut(s)	30, 541
AjuI	GAANNNNNNNTTGG	2 cut(s)	633, 665
AluBI	AGCT	6 cut(s)	12, 67, 248, 274, 388, 416
AluI	AGCT	6 cut(s)	12, 67, 248, 274, 388, 416
Alw21I	GWGCWC	3 cut(s)	69, 435, 738
AlwI	GGATC	2 cut(s)	139, 501
AoxI	GGCC	2 cut(s)	96, 121
ApeKI	GCWGC	3 cut(s)	9, 23, 596
ApoI	RAATTY	1 cut(s)	521
AsiGI	ACCGGT	1 cut(s)	643
Asp700I	GAANNNNTTC	2 cut(s)	341, 624
Asp718I	GGTACC	1 cut(s)	143
AspLEI	GCGC	2 cut(s)	108, 529
AspS9I	GGNCC	2 cut(s)	122, 373
AsuC2I	CCSGG	1 cut(s)	129
AsuHPI	GGTGA	2 cut(s)	144, 209
AvaII	GGWCC	1 cut(s)	373
BaeGI	GKGCMC	1 cut(s)	45
BanI	GGYRCC	2 cut(s)	143, 538
BanII	GRGCYC	1 cut(s)	69
Bbv12I	GWGCWC	3 cut(s)	69, 435, 738
BbvI	GCAGC	3 cut(s)	21, 35, 608
BccI	CCATC	2 cut(s)	347, 502
BciT130I	CCWGG	2 cut(s)	32, 543
BciVI	GTATCC	1 cut(s)	480
BcnI	CCSGG	1 cut(s)	129
BfaI	CTAG	1 cut(s)	389
BfmI	CTRYAG	1 cut(s)	594
BfoI	RGCGCY	1 cut(s)	109
BfuI	GTATCC	1 cut(s)	480
BisI	GCNGC	5 cut(s)	10, 24, 76, 213, 597
BlsI	GCNGC	5 cut(s)	11, 25, 77, 214, 598
Bme1390I	CCNGG	3 cut(s)	32, 129, 543
Bme18I	GGWCC	1 cut(s)	373
BmgT120I	GGNCC	2 cut(s)	122, 373
BmiI	GGNNCC	2 cut(s)	145, 540
BmrFI	CCNGG	3 cut(s)	32, 129, 543
BmsI	GCATC	3 cut(s)	309, 387, 442
BoxI	GACNNNNGTC	1 cut(s)	371
BpmI	CTGGAG	1 cut(s)	582
BpuEI	CTTGAG	2 cut(s)	590, 690
BpuMI	CCSGG	1 cut(s)	129
BsaJI	CCNNGG	5 cut(s)	15, 93, 362, 534, 720
BsaWI	WCCGGW	1 cut(s)	643
BsaXI	ACNNNNNCTCC	2 cut(s)	261, 291
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 135, 500, 650
Bse118I	RCCGGY	1 cut(s)	643
Bse1I	ACTGG	4 cut(s)	199, 481, 498, 565
Bse3DI	GCAATG	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	32, 543
BseDI	CCNNGG	5 cut(s)	15, 93, 362, 534, 720
BseGI	GGATG	3 cut(s)	172, 494, 592
BseLI	CCNNNNNNNGG	4 cut(s)	134, 135, 500, 650
BseMI	GCAATG	1 cut(s)	321
BseNI	ACTGG	4 cut(s)	199, 481, 498, 565
BseRI	GAGGAG	3 cut(s)	59, 222, 693
BseSI	GKGCMC	1 cut(s)	45
BseXI	GCAGC	3 cut(s)	21, 35, 608
Bsh1236I	CGCG	1 cut(s)	17
BshFI	GGCC	2 cut(s)	98, 123
BshNI	GGYRCC	2 cut(s)	143, 538
BshTI	ACCGGT	1 cut(s)	643
BsiHKAI	GWGCWC	3 cut(s)	69, 435, 738
BsiSI	CCGG	2 cut(s)	129, 644
BslI	CCNNNNNNNGG	4 cut(s)	134, 135, 500, 650
BsnI	GGCC	2 cut(s)	98, 123
Bsp1286I	GDGCHC	4 cut(s)	45, 69, 435, 738
Bsp143I	GATC	3 cut(s)	52, 131, 506
BspACI	CCGC	7 cut(s)	5, 15, 17, 73, 76, 213, 692
BspANI	GGCC	2 cut(s)	98, 123
BspFNI	CGCG	1 cut(s)	17
BspHI	TCATGA	1 cut(s)	57
BspLI	GGNNCC	2 cut(s)	145, 540
BspMAI	CTGCAG	1 cut(s)	598
BspPI	GGATC	2 cut(s)	139, 501
BspT107I	GGYRCC	2 cut(s)	143, 538
BsrDI	GCAATG	1 cut(s)	321
BsrFI	RCCGGY	1 cut(s)	643
BsrI	ACTGG	4 cut(s)	199, 481, 498, 565
BssAI	RCCGGY	1 cut(s)	643
BssECI	CCNNGG	5 cut(s)	15, 93, 362, 534, 720
BssMI	GATC	3 cut(s)	52, 131, 506
BssT1I	CCWWGG	3 cut(s)	93, 362, 534
Bst2UI	CCWGG	2 cut(s)	32, 543
Bst4CI	ACNGT	1 cut(s)	370
Bst6I	CTCTTC	1 cut(s)	459
BstAPI	GCANNNNNTGC	1 cut(s)	84
BstC8I	GCNNGC	1 cut(s)	7
BstDEI	CTNAG	2 cut(s)	225, 417
BstDSI	CCRYGG	1 cut(s)	15
BstF5I	GGATG	3 cut(s)	172, 494, 592
BstFNI	CGCG	1 cut(s)	17
BstH2I	RGCGCY	1 cut(s)	109
BstHHI	GCGC	2 cut(s)	108, 529
BstKTI	GATC	3 cut(s)	55, 134, 509
BstMBI	GATC	3 cut(s)	52, 131, 506
BstMWI	GCNNNNNNNGC	5 cut(s)	23, 84, 221, 254, 406
BstNI	CCWGG	2 cut(s)	32, 543
BstPAI	GACNNNNGTC	1 cut(s)	371
BstSCI	CCNGG	3 cut(s)	30, 127, 541
BstSFI	CTRYAG	1 cut(s)	594
BstSLI	GKGCMC	1 cut(s)	45
BstUI	CGCG	1 cut(s)	17
BstV1I	GCAGC	3 cut(s)	21, 35, 608
BstX2I	RGATCY	1 cut(s)	506
BstYI	RGATCY	1 cut(s)	506
BsuI	GTATCC	1 cut(s)	480
BsuRI	GGCC	2 cut(s)	98, 123
BtgI	CCRYGG	1 cut(s)	15
BtsCI	GGATG	3 cut(s)	172, 494, 592
BtsIMutI	CAGTG	1 cut(s)	505
Cac8I	GCNNGC	1 cut(s)	7
CciI	TCATGA	1 cut(s)	57
CfoI	GCGC	2 cut(s)	108, 529
Cfr10I	RCCGGY	1 cut(s)	643
Cfr13I	GGNCC	2 cut(s)	122, 373
Cfr42I	CCGCGG	1 cut(s)	18
CsiI	ACCWGGT	1 cut(s)	541
Csp6I	GTAC	1 cut(s)	144
CspAI	ACCGGT	1 cut(s)	643
CspCI	CAANNNNNGTGG	2 cut(s)	351, 386
CviAII	CATG	3 cut(s)	58, 79, 330
CviQI	GTAC	1 cut(s)	144
DdeI	CTNAG	2 cut(s)	225, 417
DpnI	GATC	3 cut(s)	54, 133, 508
DpnII	GATC	3 cut(s)	52, 131, 506
DraIII	CACNNNGTG	1 cut(s)	545
Eam1104I	CTCTTC	1 cut(s)	459
EarI	CTCTTC	1 cut(s)	459
EciI	GGCGGA	1 cut(s)	62
Ecl136II	GAGCTC	1 cut(s)	67
Eco130I	CCWWGG	3 cut(s)	93, 362, 534
Eco24I	GRGCYC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	373
Eco53kI	GAGCTC	1 cut(s)	67
EcoICRI	GAGCTC	1 cut(s)	67
EcoRII	CCWGG	2 cut(s)	30, 541
EcoT14I	CCWWGG	3 cut(s)	93, 362, 534
EcoT38I	GRGCYC	1 cut(s)	69
ErhI	CCWWGG	3 cut(s)	93, 362, 534
FaeI	CATG	3 cut(s)	61, 82, 333
FaiI	YATR	8 cut(s)	59, 80, 158, 203, 260, 305, 331, 729
FatI	CATG	3 cut(s)	57, 78, 329
Fnu4HI	GCNGC	5 cut(s)	10, 24, 76, 213, 597
FokI	GGATG	3 cut(s)	179, 481, 599
FriOI	GRGCYC	1 cut(s)	69
Fsp4HI	GCNGC	5 cut(s)	10, 24, 76, 213, 597
FspBI	CTAG	1 cut(s)	389
GlaI	GCGC	2 cut(s)	107, 528
GluI	GCNGC	5 cut(s)	10, 24, 76, 213, 597
GsuI	CTGGAG	1 cut(s)	582
HaeII	RGCGCY	1 cut(s)	109
HaeIII	GGCC	2 cut(s)	98, 123
HapII	CCGG	2 cut(s)	129, 644
HhaI	GCGC	2 cut(s)	108, 529
Hin1II	CATG	3 cut(s)	61, 82, 333
Hin6I	GCGC	2 cut(s)	106, 527
HinP1I	GCGC	2 cut(s)	106, 527
HinfI	GANTC	2 cut(s)	229, 574
HpaII	CCGG	2 cut(s)	129, 644
HphI	GGTGA	2 cut(s)	144, 209
Hpy188I	TCNGA	3 cut(s)	283, 336, 721
Hpy188III	TCNNGA	3 cut(s)	58, 350, 707
Hpy99I	CGWCG	2 cut(s)	53, 745
HpyAV	CCTTC	1 cut(s)	336
HpyCH4III	ACNGT	1 cut(s)	370
HpyCH4IV	ACGT	1 cut(s)	580
HpyCH4V	TGCA	3 cut(s)	443, 455, 596
HpyF10VI	GCNNNNNNNGC	5 cut(s)	23, 84, 221, 254, 406
HpyF3I	CTNAG	2 cut(s)	225, 417
HpySE526I	ACGT	1 cut(s)	580
Hsp92II	CATG	3 cut(s)	61, 82, 333
HspAI	GCGC	2 cut(s)	106, 527
KpnI	GGTACC	1 cut(s)	147
KspI	CCGCGG	1 cut(s)	18
Kzo9I	GATC	3 cut(s)	52, 131, 506
LmnI	GCTCC	4 cut(s)	17, 72, 92, 413
Lsp1109I	GCAGC	3 cut(s)	21, 35, 608
LweI	GCATC	3 cut(s)	309, 387, 442
MabI	ACCWGGT	1 cut(s)	541
MaeI	CTAG	1 cut(s)	389
MaeII	ACGT	1 cut(s)	580
MaeIII	GTNAC	2 cut(s)	556, 712
MalI	GATC	3 cut(s)	54, 133, 508
MboI	GATC	3 cut(s)	52, 131, 506
MboII	GAAGA	4 cut(s)	47, 331, 476, 677
MflI	RGATCY	1 cut(s)	506
MhlI	GDGCHC	4 cut(s)	45, 69, 435, 738
MluCI	AATT	2 cut(s)	159, 521
MlyI	GAGTC	1 cut(s)	223
MroXI	GAANNNNTTC	2 cut(s)	341, 624
MseI	TTAA	2 cut(s)	162, 243
MspA1I	CMGCKG	2 cut(s)	17, 215
MspI	CCGG	2 cut(s)	129, 644
MspR9I	CCNGG	3 cut(s)	32, 129, 543
MvaI	CCWGG	2 cut(s)	32, 543
MvnI	CGCG	1 cut(s)	17
MwoI	GCNNNNNNNGC	5 cut(s)	23, 84, 221, 254, 406
NciI	CCSGG	1 cut(s)	129
NdeII	GATC	3 cut(s)	52, 131, 506
NlaIII	CATG	3 cut(s)	61, 82, 333
NlaIV	GGNNCC	2 cut(s)	145, 540
NmuCI	GTSAC	1 cut(s)	712
PagI	TCATGA	1 cut(s)	57
PdmI	GAANNNNTTC	2 cut(s)	341, 624
PfeI	GAWTC	1 cut(s)	574
PflMI	CCANNNNNTGG	1 cut(s)	500
PinAI	ACCGGT	1 cut(s)	643
PkrI	GCNGC	5 cut(s)	11, 25, 77, 214, 598
PleI	GAGTC	1 cut(s)	223
PpsI	GAGTC	1 cut(s)	223
PshAI	GACNNNNGTC	1 cut(s)	371
Psp124BI	GAGCTC	1 cut(s)	69
Psp6I	CCWGG	2 cut(s)	30, 541
PspGI	CCWGG	2 cut(s)	30, 541
PspN4I	GGNNCC	2 cut(s)	145, 540
PspPI	GGNCC	2 cut(s)	122, 373
PstI	CTGCAG	1 cut(s)	598
PsuI	RGATCY	1 cut(s)	506
RsaI	GTAC	1 cut(s)	145
RsaNI	GTAC	1 cut(s)	144
SacI	GAGCTC	1 cut(s)	69
SacII	CCGCGG	1 cut(s)	18
SaqAI	TTAA	2 cut(s)	162, 243
SatI	GCNGC	5 cut(s)	10, 24, 76, 213, 597
Sau3AI	GATC	3 cut(s)	52, 131, 506
Sau96I	GGNCC	2 cut(s)	122, 373
SchI	GAGTC	1 cut(s)	223
ScrFI	CCNGG	3 cut(s)	32, 129, 543
SduI	GDGCHC	4 cut(s)	45, 69, 435, 738
SexAI	ACCWGGT	1 cut(s)	541
SfaNI	GCATC	3 cut(s)	309, 387, 442
SfcI	CTRYAG	1 cut(s)	594
Sfr303I	CCGCGG	1 cut(s)	18
SgrBI	CCGCGG	1 cut(s)	18
SinI	GGWCC	1 cut(s)	373
SmlI	CTYRAG	2 cut(s)	605, 705
SmoI	CTYRAG	2 cut(s)	605, 705
Sse9I	AATT	2 cut(s)	159, 521
SsiI	CCGC	7 cut(s)	5, 15, 17, 73, 76, 213, 692
SspMI	CTAG	1 cut(s)	389
SstI	GAGCTC	1 cut(s)	69
StyD4I	CCNGG	3 cut(s)	30, 127, 541
StyI	CCWWGG	3 cut(s)	93, 362, 534
TaaI	ACNGT	1 cut(s)	370
TaiI	ACGT	1 cut(s)	583
TaqI	TCGA	1 cut(s)	51
TaqII	GACCGA	1 cut(s)	77
TasI	AATT	2 cut(s)	159, 521
TauI	GCSGC	2 cut(s)	78, 215
TfiI	GAWTC	1 cut(s)	574
Tru1I	TTAA	2 cut(s)	162, 243
Tru9I	TTAA	2 cut(s)	162, 243
TscAI	CASTG	1 cut(s)	505
TseFI	GTSAC	1 cut(s)	712
TseI	GCWGC	3 cut(s)	9, 23, 596
Tsp45I	GTSAC	1 cut(s)	712
TspDTI	ATGAA	6 cut(s)	95, 318, 324, 332, 334, 716
TspGWI	ACGGA	1 cut(s)	37
TspRI	CASTG	1 cut(s)	505
Van91I	CCANNNNNTGG	1 cut(s)	500
VpaK11BI	GGWCC	1 cut(s)	373
XapI	RAATTY	1 cut(s)	521
XcmI	CCANNNNNNNNNTGG	1 cut(s)	191
XmnI	GAANNNNTTC	2 cut(s)	341, 624
XspI	CTAG	1 cut(s)	389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.