Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0008493

Physical Location & Seq

Genomic Coordinates Forward (+)

13812186 .. 13815596

Gene Structure 3411 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G153600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 744 bp

ATGGCAAGCATTTCTGCGGCAGCTAACTTGGAAGATGTGCCTTCCGTTGATCTCATGACCGAGCTCCTTCGTCGTATGAAATGCTCCACCAAGCCTGACAAACGCCTCATTCTCATTGGCCCACCTGGGTCAGGAAAAGGTACCCAATCACCTATAATTAAGGATGACTATTGCTTGTGCCACTTGGCTACTGGTGATATGTTGAGAGCTGCTGTTTCTGCAAAGACTCCTCTTGGGATTAAAGCTAAAGAGGCTATGGATAAGGGAGAGCTTGTTTCTGATGACTTGGTTGTTGGCATCATAGATGAAGCAATGAAGAAGCCTTCATGTCAAAAAGGTTTCATTCTTGATGGATTTCCAAGGACTGTGGTCCAAGCAGAGAAGCTAGATGAGATGCTGAAAAAGCAGGGAGCTAAAGTTGATAAGGTGCTCAACTTTGCAATTGATGACGCAATCTTGGAAGAGAGGATTACTGGTCGCTGGATACACCCATCCAGTGGTAGAACCTACCACACGAAATTTGCACCACCCAAGACTCCTGGTGTTGATGATGTAACTGGAGAACCTCTGATTCAAAGAAAGGATGATACTGCAGCTGTTCTCAGGTCAAGGCTGGAAGCATTTCACAAGCAAACTGAACCAGTTATTGGTTATTATTCCCAGAAAGGCATTGTTGCCAATCTGCAAGCCGAGAAACCTCCCAAAGAGGTCACTGTCGAGGTTCAGAAAGCGCTCTCTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004017 GO:0005488 GO:0005524 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0017076 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046483 GO:0046940 GO:0050145 GO:0055086 GO:0071704 GO:0072521 GO:0090407 GO:0097159 GO:0097367 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK ADK_lid

Protein Analysis

248

Amino Acids

26.91

Weight (kDa)

8.24

Isoelectric Point (pI)

36.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50370 AT5G50370 AT5G63400 AT5G63400
fragaria_vesca	FvH4_5g07870
malus_domestica	MD06G1145300.v1.1 MD14G1160000.v1.1
prunus_persica	Prupe.5G153600_v2.0.a1 Prupe.5G153600_v2.0.a1
pyrus_communis	pycom06g13460 pycom14g13350
rosa_chinensis	RchiOBHm_Chr7g0190591
rosa_laevigata	RLG00000004512
rosa_multiflora	Rmu_co8305173.1_g000001 Rmu_sc0006709.1_g000012
rosa_roxburghii	Rroxscaffold_3G00264480
rosa_rugosa	Rorug06G0505500 Rorug06G0505600
rosa_samantha	Rh7AG112100 Rh7BG114900
rosa_wichuraiana	Rw4G010280 Rw7G009780 Rw7G039730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	140
AccB1I	GGYRCC	1 cut(s)	140
AccB7I	CCANNNNNTGG	2 cut(s)	497, 647
AciI	CCGC	1 cut(s)	17
AcsI	RAATTY	1 cut(s)	518
AfaI	GTAC	1 cut(s)	142
AfeI	AGCGCT	1 cut(s)	732
AfiI	CCNNNNNNNGG	3 cut(s)	131, 497, 647
AgsI	TTSAA	1 cut(s)	575
AjnI	CCWGG	2 cut(s)	124, 538
AjuI	GAANNNNNNNTTGG	2 cut(s)	630, 662
AluBI	AGCT	8 cut(s)	23, 64, 209, 245, 271, 385, 413, 596
AluI	AGCT	8 cut(s)	23, 64, 209, 245, 271, 385, 413, 596
Alw21I	GWGCWC	2 cut(s)	66, 432
Aor51HI	AGCGCT	1 cut(s)	732
AoxI	GGCC	1 cut(s)	118
ApeKI	GCWGC	3 cut(s)	20, 209, 593
ApoI	RAATTY	1 cut(s)	518
Asp700I	GAANNNNTTC	1 cut(s)	621
Asp718I	GGTACC	1 cut(s)	140
AspLEI	GCGC	1 cut(s)	733
AspS9I	GGNCC	2 cut(s)	119, 370
AsuHPI	GGTGA	2 cut(s)	141, 206
AvaII	GGWCC	1 cut(s)	370
BanI	GGYRCC	1 cut(s)	140
BanII	GRGCYC	1 cut(s)	66
Bbv12I	GWGCWC	2 cut(s)	66, 432
BbvI	GCAGC	3 cut(s)	32, 196, 605
BccI	CCATC	2 cut(s)	344, 499
BciT130I	CCWGG	2 cut(s)	126, 540
BciVI	GTATCC	1 cut(s)	477
BfaI	CTAG	2 cut(s)	386, 742
BfmI	CTRYAG	1 cut(s)	591
BfoI	RGCGCY	1 cut(s)	734
BfuI	GTATCC	1 cut(s)	477
BisI	GCNGC	4 cut(s)	18, 21, 210, 594
BlsI	GCNGC	4 cut(s)	19, 22, 211, 595
Bme1390I	CCNGG	2 cut(s)	126, 540
Bme18I	GGWCC	1 cut(s)	370
BmgT120I	GGNCC	2 cut(s)	119, 370
BmiI	GGNNCC	1 cut(s)	142
BmrFI	CCNGG	2 cut(s)	126, 540
BmsI	GCATC	2 cut(s)	306, 384
BoxI	GACNNNNGTC	1 cut(s)	368
BpmI	CTGGAG	1 cut(s)	579
BsaJI	CCNNGG	2 cut(s)	125, 359
BsaXI	ACNNNNNCTCC	4 cut(s)	258, 288, 402, 432
Bsc4I	CCNNNNNNNGG	3 cut(s)	131, 497, 647
Bse1I	ACTGG	5 cut(s)	196, 478, 495, 562, 641
Bse3DI	GCAATG	1 cut(s)	318
BseBI	CCWGG	2 cut(s)	126, 540
BseDI	CCNNGG	2 cut(s)	125, 359
BseGI	GGATG	3 cut(s)	169, 491, 589
BseLI	CCNNNNNNNGG	3 cut(s)	131, 497, 647
BseMI	GCAATG	1 cut(s)	318
BseMII	CTCAG	1 cut(s)	616
BseNI	ACTGG	5 cut(s)	196, 478, 495, 562, 641
BseRI	GAGGAG	1 cut(s)	219
BseXI	GCAGC	3 cut(s)	32, 196, 605
BshFI	GGCC	1 cut(s)	120
BshNI	GGYRCC	1 cut(s)	140
BsiHKAI	GWGCWC	2 cut(s)	66, 432
BslI	CCNNNNNNNGG	3 cut(s)	131, 497, 647
BsnI	GGCC	1 cut(s)	120
Bsp1286I	GDGCHC	2 cut(s)	66, 432
Bsp143I	GATC	1 cut(s)	49
BspACI	CCGC	1 cut(s)	17
BspANI	GGCC	1 cut(s)	120
BspCNI	CTCAG	1 cut(s)	615
BspHI	TCATGA	1 cut(s)	54
BspLI	GGNNCC	1 cut(s)	142
BspMAI	CTGCAG	1 cut(s)	595
BspT107I	GGYRCC	1 cut(s)	140
BsrDI	GCAATG	1 cut(s)	318
BsrI	ACTGG	5 cut(s)	196, 478, 495, 562, 641
BssECI	CCNNGG	2 cut(s)	125, 359
BssMI	GATC	1 cut(s)	49
BssT1I	CCWWGG	1 cut(s)	359
Bst2UI	CCWGG	2 cut(s)	126, 540
Bst4CI	ACNGT	2 cut(s)	367, 715
Bst6I	CTCTTC	1 cut(s)	456
BstC8I	GCNNGC	2 cut(s)	7, 687
BstDEI	CTNAG	1 cut(s)	602
BstENI	CCTNNNNNAGG	1 cut(s)	129
BstF5I	GGATG	3 cut(s)	169, 491, 589
BstH2I	RGCGCY	1 cut(s)	734
BstHHI	GCGC	1 cut(s)	733
BstKTI	GATC	1 cut(s)	52
BstMBI	GATC	1 cut(s)	49
BstMWI	GCNNNNNNNGC	3 cut(s)	218, 251, 403
BstNI	CCWGG	2 cut(s)	126, 540
BstPAI	GACNNNNGTC	1 cut(s)	368
BstSCI	CCNGG	2 cut(s)	124, 538
BstSFI	CTRYAG	1 cut(s)	591
BstV1I	GCAGC	3 cut(s)	32, 196, 605
BsuI	GTATCC	1 cut(s)	477
BsuRI	GGCC	1 cut(s)	120
BtsCI	GGATG	3 cut(s)	169, 491, 589
BtsIMutI	CAGTG	2 cut(s)	502, 711
Cac8I	GCNNGC	2 cut(s)	7, 687
CciI	TCATGA	1 cut(s)	54
CfoI	GCGC	1 cut(s)	733
Cfr13I	GGNCC	2 cut(s)	119, 370
CseI	GACGC	1 cut(s)	458
Csp6I	GTAC	1 cut(s)	141
CspCI	CAANNNNNGTGG	2 cut(s)	348, 383
CviAII	CATG	2 cut(s)	55, 327
CviQI	GTAC	1 cut(s)	141
DdeI	CTNAG	1 cut(s)	602
DpnI	GATC	1 cut(s)	51
DpnII	GATC	1 cut(s)	49
Eam1104I	CTCTTC	1 cut(s)	456
EarI	CTCTTC	1 cut(s)	456
Ecl136II	GAGCTC	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	359
Eco24I	GRGCYC	1 cut(s)	66
Eco47I	GGWCC	1 cut(s)	370
Eco47III	AGCGCT	1 cut(s)	732
Eco53kI	GAGCTC	1 cut(s)	64
EcoICRI	GAGCTC	1 cut(s)	64
EcoNI	CCTNNNNNAGG	1 cut(s)	129
EcoRII	CCWGG	2 cut(s)	124, 538
EcoT14I	CCWWGG	1 cut(s)	359
EcoT38I	GRGCYC	1 cut(s)	66
ErhI	CCWWGG	1 cut(s)	359
FaeI	CATG	2 cut(s)	58, 330
FaiI	YATR	7 cut(s)	56, 77, 155, 200, 257, 302, 328
FatI	CATG	2 cut(s)	54, 326
Fnu4HI	GCNGC	4 cut(s)	18, 21, 210, 594
FokI	GGATG	3 cut(s)	176, 478, 596
FriOI	GRGCYC	1 cut(s)	66
Fsp4HI	GCNGC	4 cut(s)	18, 21, 210, 594
FspBI	CTAG	2 cut(s)	386, 742
GlaI	GCGC	1 cut(s)	732
GluI	GCNGC	4 cut(s)	18, 21, 210, 594
GsuI	CTGGAG	1 cut(s)	579
HaeII	RGCGCY	1 cut(s)	734
HaeIII	GGCC	1 cut(s)	120
HgaI	GACGC	1 cut(s)	458
HhaI	GCGC	1 cut(s)	733
Hin1II	CATG	2 cut(s)	58, 330
Hin6I	GCGC	1 cut(s)	731
HinP1I	GCGC	1 cut(s)	731
HinfI	GANTC	3 cut(s)	226, 535, 571
HphI	GGTGA	2 cut(s)	141, 206
Hpy188I	TCNGA	3 cut(s)	280, 570, 726
Hpy188III	TCNNGA	3 cut(s)	55, 132, 347
Hpy99I	CGWCG	1 cut(s)	75
HpyAV	CCTTC	3 cut(s)	51, 77, 333
HpyCH4III	ACNGT	2 cut(s)	367, 715
HpyCH4V	TGCA	5 cut(s)	221, 440, 524, 593, 685
HpyF10VI	GCNNNNNNNGC	3 cut(s)	218, 251, 403
HpyF3I	CTNAG	1 cut(s)	602
Hsp92II	CATG	2 cut(s)	58, 330
HspAI	GCGC	1 cut(s)	731
KpnI	GGTACC	1 cut(s)	144
Kzo9I	GATC	1 cut(s)	49
LmnI	GCTCC	3 cut(s)	69, 89, 410
Lsp1109I	GCAGC	3 cut(s)	32, 196, 605
LweI	GCATC	2 cut(s)	306, 384
MaeI	CTAG	2 cut(s)	386, 742
MaeIII	GTNAC	2 cut(s)	553, 709
MalI	GATC	1 cut(s)	51
MboI	GATC	1 cut(s)	49
MboII	GAAGA	4 cut(s)	44, 328, 473, 729
MfeI	CAATTG	1 cut(s)	441
MhlI	GDGCHC	2 cut(s)	66, 432
MluCI	AATT	3 cut(s)	156, 441, 518
MlyI	GAGTC	2 cut(s)	220, 529
MnlI	CCTC	8 cut(s)	116, 240, 244, 459, 576, 700, 708, 712
MroXI	GAANNNNTTC	1 cut(s)	621
MseI	TTAA	2 cut(s)	159, 240
MspA1I	CMGCKG	1 cut(s)	596
MspR9I	CCNGG	2 cut(s)	126, 540
MunI	CAATTG	1 cut(s)	441
MvaI	CCWGG	2 cut(s)	126, 540
MwoI	GCNNNNNNNGC	3 cut(s)	218, 251, 403
NdeII	GATC	1 cut(s)	49
NlaIII	CATG	2 cut(s)	58, 330
NlaIV	GGNNCC	1 cut(s)	142
NmeAIII	GCCGAG	1 cut(s)	715
NmuCI	GTSAC	1 cut(s)	709
PagI	TCATGA	1 cut(s)	54
PdmI	GAANNNNTTC	1 cut(s)	621
PfeI	GAWTC	1 cut(s)	571
PflMI	CCANNNNNTGG	2 cut(s)	497, 647
PkrI	GCNGC	4 cut(s)	19, 22, 211, 595
PleI	GAGTC	2 cut(s)	220, 529
PpsI	GAGTC	2 cut(s)	220, 529
PshAI	GACNNNNGTC	1 cut(s)	368
Psp124BI	GAGCTC	1 cut(s)	66
Psp6I	CCWGG	2 cut(s)	124, 538
PspGI	CCWGG	2 cut(s)	124, 538
PspN4I	GGNNCC	1 cut(s)	142
PspPI	GGNCC	2 cut(s)	119, 370
PstI	CTGCAG	1 cut(s)	595
PvuII	CAGCTG	1 cut(s)	596
RsaI	GTAC	1 cut(s)	142
RsaNI	GTAC	1 cut(s)	141
SacI	GAGCTC	1 cut(s)	66
SaqAI	TTAA	2 cut(s)	159, 240
SatI	GCNGC	4 cut(s)	18, 21, 210, 594
Sau3AI	GATC	1 cut(s)	49
Sau96I	GGNCC	2 cut(s)	119, 370
SchI	GAGTC	2 cut(s)	220, 529
ScrFI	CCNGG	2 cut(s)	126, 540
SduI	GDGCHC	2 cut(s)	66, 432
SfaNI	GCATC	2 cut(s)	306, 384
SfcI	CTRYAG	1 cut(s)	591
SinI	GGWCC	1 cut(s)	370
Sse9I	AATT	3 cut(s)	156, 441, 518
SsiI	CCGC	1 cut(s)	17
SspMI	CTAG	2 cut(s)	386, 742
SstI	GAGCTC	1 cut(s)	66
StyD4I	CCNGG	2 cut(s)	124, 538
StyI	CCWWGG	1 cut(s)	359
TaaI	ACNGT	2 cut(s)	367, 715
TaqI	TCGA	1 cut(s)	717
TaqII	GACCGA	1 cut(s)	74
TasI	AATT	3 cut(s)	156, 441, 518
TauI	GCSGC	1 cut(s)	20
TfiI	GAWTC	1 cut(s)	571
Tru1I	TTAA	2 cut(s)	159, 240
Tru9I	TTAA	2 cut(s)	159, 240
TscAI	CASTG	2 cut(s)	502, 718
TseFI	GTSAC	1 cut(s)	709
TseI	GCWGC	3 cut(s)	20, 209, 593
Tsp45I	GTSAC	1 cut(s)	709
TspDTI	ATGAA	5 cut(s)	92, 315, 321, 329, 331
TspGWI	ACGGA	1 cut(s)	34
TspRI	CASTG	2 cut(s)	502, 718
Van91I	CCANNNNNTGG	2 cut(s)	497, 647
VpaK11BI	GGWCC	1 cut(s)	370
XagI	CCTNNNNNAGG	1 cut(s)	129
XapI	RAATTY	1 cut(s)	518
XcmI	CCANNNNNNNNNTGG	1 cut(s)	188
XmnI	GAANNNNTTC	1 cut(s)	621
XspI	CTAG	2 cut(s)	386, 742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.