ARF guanine-nucleotide exchange factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G19610 |
| fragaria_vesca | FvH4_1g05140 |
| malus_domestica | MD02G1050300.v1.1 MD15G1187600.v1.1 |
| prunus_persica | Prupe.7G228800_v2.0.a1 |
| pyrus_communis | pycom02g04190 pycom02g04200 pycom15g16840 |
| rosa_chinensis | RchiOBHm_Chr2g0090771 RchiOBHm_Chr2g0090781 |
| rosa_laevigata | RLG00000016142 |
| rosa_multiflora | Rmu_co8351113.1_g000001 Rmu_ssc0000367.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00150830 |
| rosa_rugosa | Rorug02G0010400 |
| rosa_samantha | Rh2AG056400 Rh2BG055100 Rh2CG057500 Rh2DG056000 Rh2DG056100 |
| rosa_wichuraiana | Rw2G004610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1148, 1512 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 814, 2052 |
| AatII | GACGTC | 2 cut(s) | 282, 711 |
| AccB1I | GGYRCC | 3 cut(s) | 95, 149, 1271 |
| AccBSI | CCGCTC | 1 cut(s) | 1786 |
| AccI | GTMKAC | 4 cut(s) | 171, 711, 818, 1403 |
| AccII | CGCG | 3 cut(s) | 878, 3328, 3763 |
| AccIII | TCCGGA | 2 cut(s) | 1573, 1734 |
| AclI | AACGTT | 1 cut(s) | 1697 |
| AcoI | YGGCCR | 1 cut(s) | 2913 |
| AcsI | RAATTY | 9 cut(s) | 1454, 1810, 2135, 2310, 2330, 2534, 2708, 2774, 3556 |
| AcuI | CTGAAG | 6 cut(s) | 723, 1356, 2042, 2241, 2743, 3842 |
| AcvI | CACGTG | 1 cut(s) | 423 |
| AcyI | GRCGYC | 5 cut(s) | 150, 279, 390, 459, 708 |
| AdeI | CACNNNGTG | 1 cut(s) | 423 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 426, 511, 682, 1308 |
| AflII | CTTAAG | 3 cut(s) | 1543, 2498, 3377 |
| AflIII | ACRYGT | 1 cut(s) | 422 |
| AhlI | ACTAGT | 1 cut(s) | 3973 |
| AjiI | CACGTC | 2 cut(s) | 142, 585 |
| AjnI | CCWGG | 4 cut(s) | 376, 1102, 1612, 1762 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2859, 2891, 3374, 3406 |
| Alw21I | GWGCWC | 4 cut(s) | 63, 545, 963, 3090 |
| Alw44I | GTGCAC | 2 cut(s) | 541, 959 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 2192, 2828, 3147, 3431, 3476 |
| Ama87I | CYCGRG | 2 cut(s) | 2801, 3874 |
| Aor13HI | TCCGGA | 2 cut(s) | 1573, 1734 |
| AoxI | GGCC | 6 cut(s) | 1376, 2620, 2913, 2942, 3015, 3025 |
| ApaLI | GTGCAC | 2 cut(s) | 541, 959 |
| ApeKI | GCWGC | 9 cut(s) | 481, 847, 2192, 2512, 2543, 2546, 2822, 2825, 3543 |
| ApoI | RAATTY | 9 cut(s) | 1454, 1810, 2135, 2310, 2330, 2534, 2708, 2774, 3556 |
| AseI | ATTAAT | 1 cut(s) | 2643 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2756 |
| AspLEI | GCGC | 3 cut(s) | 152, 240, 3494 |
| AspS9I | GGNCC | 3 cut(s) | 1376, 2180, 3415 |
| AsuC2I | CCSGG | 5 cut(s) | 158, 983, 3080, 3875, 3876 |
| AsuHPI | GGTGA | 8 cut(s) | 409, 481, 941, 1661, 1870, 2419, 3587, 3962 |
| AsuII | TTCGAA | 2 cut(s) | 914, 3883 |
| AvaI | CYCGRG | 2 cut(s) | 2801, 3874 |
| AvaII | GGWCC | 2 cut(s) | 2180, 3415 |
| AxyI | CCTNAGG | 1 cut(s) | 2781 |
| BaeGI | GKGCMC | 3 cut(s) | 545, 963, 1276 |
| BamHI | GGATCC | 1 cut(s) | 1576 |
| BanI | GGYRCC | 3 cut(s) | 95, 149, 1271 |
| BanII | GRGCYC | 3 cut(s) | 63, 3090, 3875 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3520, 3552 |
| BauI | CACGAG | 1 cut(s) | 588 |
| BbrPI | CACGTG | 1 cut(s) | 423 |
| BbsI | GAAGAC | 9 cut(s) | 136, 168, 352, 377, 443, 711, 1941, 2048, 2301 |
| Bbv12I | GWGCWC | 4 cut(s) | 63, 545, 963, 3090 |
| BbvCI | CCTCAGC | 1 cut(s) | 3663 |
| BbvI | GCAGC | 9 cut(s) | 493, 859, 2179, 2499, 2530, 2533, 2812, 2834, 3555 |
| BceAI | ACGGC | 4 cut(s) | 92, 446, 2021, 2130 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2892, 2926 |
| BciT130I | CCWGG | 4 cut(s) | 378, 1104, 1614, 1764 |
| BciVI | GTATCC | 2 cut(s) | 1846, 2701 |
| BclI | TGATCA | 3 cut(s) | 867, 1897, 2305 |
| BcnI | CCSGG | 5 cut(s) | 158, 983, 3080, 3875, 3876 |
| BcuI | ACTAGT | 1 cut(s) | 3973 |
| BfmI | CTRYAG | 6 cut(s) | 479, 1156, 1830, 2202, 2361, 3487 |
| BfoI | RGCGCY | 2 cut(s) | 153, 3495 |
| BfrI | CTTAAG | 3 cut(s) | 1543, 2498, 3377 |
| BfuI | GTATCC | 2 cut(s) | 1846, 2701 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2151 |
| BlpI | GCTNAGC | 1 cut(s) | 3598 |
| BmcAI | AGTACT | 4 cut(s) | 1541, 3582, 3758, 3963 |
| Bme1390I | CCNGG | 9 cut(s) | 158, 378, 983, 1104, 1614, 1764, 3080, 3875, 3876 |
| Bme18I | GGWCC | 2 cut(s) | 2180, 3415 |
| BmeT110I | CYCGRG | 2 cut(s) | 2801, 3874 |
| BmgBI | CACGTC | 2 cut(s) | 142, 585 |
| BmgT120I | GGNCC | 3 cut(s) | 1376, 2180, 3415 |
| BmiI | GGNNCC | 6 cut(s) | 97, 151, 382, 1273, 1578, 2930 |
| BmrFI | CCNGG | 9 cut(s) | 158, 378, 983, 1104, 1614, 1764, 3080, 3875, 3876 |
| BmrI | ACTGGG | 1 cut(s) | 117 |
| BmsI | GCATC | 6 cut(s) | 459, 1103, 2530, 2596, 2674, 2776 |
| BmuI | ACTGGG | 1 cut(s) | 117 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1728, 3293 |
| BpiI | GAAGAC | 9 cut(s) | 136, 168, 352, 377, 443, 711, 1941, 2048, 2301 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 309, 341, 2263, 2295 |
| BpmI | CTGGAG | 7 cut(s) | 399, 1037, 1086, 1785, 2488, 3143, 3666 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3663 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3598 |
| Bpu14I | TTCGAA | 2 cut(s) | 914, 3883 |
| BpuEI | CTTGAG | 7 cut(s) | 179, 332, 452, 1766, 1814, 2586, 2708 |
| BpuMI | CCSGG | 5 cut(s) | 158, 983, 3080, 3875, 3876 |
| BsaAI | YACGTR | 1 cut(s) | 423 |
| BsaHI | GRCGYC | 5 cut(s) | 150, 279, 390, 459, 708 |
| BsaI | GGTCTC | 1 cut(s) | 1736 |
| BsaJI | CCNNGG | 7 cut(s) | 156, 376, 384, 2695, 3052, 3874, 3875 |
| BsaWI | WCCGGW | 7 cut(s) | 445, 491, 1264, 1573, 1602, 1734, 2582 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3488, 3518 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 426, 511, 682, 1308 |
| Bse1I | ACTGG | 5 cut(s) | 123, 1054, 1140, 3417, 3683 |
| Bse21I | CCTNAGG | 1 cut(s) | 2781 |
| Bse3DI | GCAATG | 6 cut(s) | 25, 1332, 2172, 2430, 3018, 3729 |
| BseAI | TCCGGA | 2 cut(s) | 1573, 1734 |
| BseBI | CCWGG | 4 cut(s) | 378, 1104, 1614, 1764 |
| BseDI | CCNNGG | 7 cut(s) | 156, 376, 384, 2695, 3052, 3874, 3875 |
| BseGI | GGATG | 7 cut(s) | 111, 282, 672, 933, 2791, 2896, 4108 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 426, 511, 682, 1308 |
| BseMI | GCAATG | 6 cut(s) | 25, 1332, 2172, 2430, 3018, 3729 |
| BseMII | CTCAG | 8 cut(s) | 1389, 1480, 2294, 2772, 2990, 3177, 3483, 3654 |
| BseNI | ACTGG | 5 cut(s) | 123, 1054, 1140, 3417, 3683 |
| BseRI | GAGGAG | 4 cut(s) | 476, 1244, 3098, 3496 |
| BseSI | GKGCMC | 3 cut(s) | 545, 963, 1276 |
| BseXI | GCAGC | 9 cut(s) | 493, 859, 2179, 2499, 2530, 2533, 2812, 2834, 3555 |
| BseYI | CCCAGC | 3 cut(s) | 2596, 2828, 2886 |
| BsgI | GTGCAG | 2 cut(s) | 866, 2697 |
| Bsh1236I | CGCG | 3 cut(s) | 878, 3328, 3763 |
| Bsh1285I | CGRYCG | 1 cut(s) | 882 |
| BshFI | GGCC | 6 cut(s) | 1378, 2622, 2915, 2944, 3017, 3027 |
| BshNI | GGYRCC | 3 cut(s) | 95, 149, 1271 |
| BsiEI | CGRYCG | 1 cut(s) | 882 |
| BsiHKAI | GWGCWC | 4 cut(s) | 63, 545, 963, 3090 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2801, 3874 |
| BslFI | GGGAC | 6 cut(s) | 608, 919, 982, 1756, 3070, 3962 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 426, 511, 682, 1308 |
| BsmBI | CGTCTC | 1 cut(s) | 1055 |
| BsmFI | GGGAC | 6 cut(s) | 608, 919, 982, 1756, 3070, 3962 |
| BsmI | GAATGC | 1 cut(s) | 2249 |
| BsnI | GGCC | 6 cut(s) | 1378, 2622, 2915, 2944, 3017, 3027 |
| Bso31I | GGTCTC | 1 cut(s) | 1736 |
| BsoBI | CYCGRG | 2 cut(s) | 2801, 3874 |
| Bsp119I | TTCGAA | 2 cut(s) | 914, 3883 |
| Bsp1286I | GDGCHC | 6 cut(s) | 63, 545, 963, 1276, 3090, 3875 |
| Bsp13I | TCCGGA | 2 cut(s) | 1573, 1734 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3598 |
| BspANI | GGCC | 6 cut(s) | 1378, 2622, 2915, 2944, 3017, 3027 |
| BspCNI | CTCAG | 8 cut(s) | 1390, 1479, 2293, 2773, 2989, 3178, 3482, 3655 |
| BspEI | TCCGGA | 2 cut(s) | 1573, 1734 |
| BspFNI | CGCG | 3 cut(s) | 878, 3328, 3763 |
| BspHI | TCATGA | 2 cut(s) | 1320, 2953 |
| BspLI | GGNNCC | 6 cut(s) | 97, 151, 382, 1273, 1578, 2930 |
| BspMAI | CTGCAG | 4 cut(s) | 483, 1160, 2206, 2365 |
| BspQI | GCTCTTC | 1 cut(s) | 3541 |
| BspT104I | TTCGAA | 2 cut(s) | 914, 3883 |
| BspT107I | GGYRCC | 3 cut(s) | 95, 149, 1271 |
| BspTI | CTTAAG | 3 cut(s) | 1543, 2498, 3377 |
| BspTNI | GGTCTC | 1 cut(s) | 1736 |
| BsrBI | CCGCTC | 1 cut(s) | 1786 |
| BsrDI | GCAATG | 6 cut(s) | 25, 1332, 2172, 2430, 3018, 3729 |
| BsrI | ACTGG | 5 cut(s) | 123, 1054, 1140, 3417, 3683 |
| BssECI | CCNNGG | 7 cut(s) | 156, 376, 384, 2695, 3052, 3874, 3875 |
| BssNAI | GTATAC | 1 cut(s) | 1404 |
| BssNI | GRCGYC | 5 cut(s) | 150, 279, 390, 459, 708 |
| BssSI | CACGAG | 1 cut(s) | 588 |
| BssT1I | CCWWGG | 3 cut(s) | 384, 2695, 3052 |
| Bst1107I | GTATAC | 1 cut(s) | 1404 |
| Bst2BI | CACGAG | 1 cut(s) | 588 |
| Bst2UI | CCWGG | 4 cut(s) | 378, 1104, 1614, 1764 |
| Bst6I | CTCTTC | 4 cut(s) | 186, 3035, 3541, 3606 |
| BstACI | GRCGYC | 5 cut(s) | 150, 279, 390, 459, 708 |
| BstAFI | CTTAAG | 3 cut(s) | 1543, 2498, 3377 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 478, 2684 |
| BstBAI | YACGTR | 1 cut(s) | 423 |
| BstBI | TTCGAA | 2 cut(s) | 914, 3883 |
| BstEII | GGTNACC | 1 cut(s) | 1758 |
| BstF5I | GGATG | 7 cut(s) | 111, 282, 672, 933, 2791, 2896, 4108 |
| BstFNI | CGCG | 3 cut(s) | 878, 3328, 3763 |
| BstH2I | RGCGCY | 2 cut(s) | 153, 3495 |
| BstHHI | GCGC | 3 cut(s) | 152, 240, 3494 |
| BstMCI | CGRYCG | 1 cut(s) | 882 |
| BstNI | CCWGG | 4 cut(s) | 378, 1104, 1614, 1764 |
| BstNSI | RCATGY | 3 cut(s) | 79, 2219, 3776 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1728, 3293 |
| BstPI | GGTNACC | 1 cut(s) | 1758 |
| BstSCI | CCNGG | 9 cut(s) | 156, 376, 981, 1102, 1612, 1762, 3078, 3873, 3874 |
| BstSFI | CTRYAG | 6 cut(s) | 479, 1156, 1830, 2202, 2361, 3487 |
| BstSLI | GKGCMC | 3 cut(s) | 545, 963, 1276 |
| BstUI | CGCG | 3 cut(s) | 878, 3328, 3763 |
| BstV1I | GCAGC | 9 cut(s) | 493, 859, 2179, 2499, 2530, 2533, 2812, 2834, 3555 |
| BstV2I | GAAGAC | 9 cut(s) | 136, 168, 352, 377, 443, 711, 1941, 2048, 2301 |
| BstX2I | RGATCY | 4 cut(s) | 1576, 1978, 3048, 3472 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2082, 2633 |
| BstYI | RGATCY | 4 cut(s) | 1576, 1978, 3048, 3472 |
| BstZ17I | GTATAC | 1 cut(s) | 1404 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2781 |
| BsuI | GTATCC | 2 cut(s) | 1846, 2701 |
| BsuRI | GGCC | 6 cut(s) | 1378, 2622, 2915, 2944, 3017, 3027 |
| BtrI | CACGTC | 2 cut(s) | 142, 585 |
| BtsCI | GGATG | 7 cut(s) | 111, 282, 672, 933, 2791, 2896, 4108 |
| BtsI | GCAGTG | 3 cut(s) | 522, 1262, 2211 |
| CaiI | CAGNNNCTG | 5 cut(s) | 2192, 2828, 3147, 3431, 3476 |
| CciI | TCATGA | 2 cut(s) | 1320, 2953 |
| CfoI | GCGC | 3 cut(s) | 152, 240, 3494 |
| Cfr13I | GGNCC | 3 cut(s) | 1376, 2180, 3415 |
| Cfr9I | CCCGGG | 1 cut(s) | 3874 |
| CseI | GACGC | 2 cut(s) | 398, 467 |
| DinI | GGCGCC | 1 cut(s) | 151 |
| DraIII | CACNNNGTG | 1 cut(s) | 423 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 814, 2052 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 814, 2052 |
| EaeI | YGGCCR | 1 cut(s) | 2913 |
| Eam1104I | CTCTTC | 4 cut(s) | 186, 3035, 3541, 3606 |
| EarI | CTCTTC | 4 cut(s) | 186, 3035, 3541, 3606 |
| EciI | GGCGGA | 1 cut(s) | 104 |
| Ecl136II | GAGCTC | 2 cut(s) | 61, 3088 |
| Eco130I | CCWWGG | 3 cut(s) | 384, 2695, 3052 |
| Eco147I | AGGCCT | 1 cut(s) | 3027 |
| Eco24I | GRGCYC | 3 cut(s) | 63, 3090, 3875 |
| Eco31I | GGTCTC | 1 cut(s) | 1736 |
| Eco32I | GATATC | 1 cut(s) | 3864 |
| Eco47I | GGWCC | 2 cut(s) | 2180, 3415 |
| Eco53kI | GAGCTC | 2 cut(s) | 61, 3088 |
| Eco57I | CTGAAG | 6 cut(s) | 723, 1356, 2042, 2241, 2743, 3842 |
| Eco72I | CACGTG | 1 cut(s) | 423 |
| Eco81I | CCTNAGG | 1 cut(s) | 2781 |
| Eco88I | CYCGRG | 2 cut(s) | 2801, 3874 |
| Eco91I | GGTNACC | 1 cut(s) | 1758 |
| EcoICRI | GAGCTC | 2 cut(s) | 61, 3088 |
| EcoO65I | GGTNACC | 1 cut(s) | 1758 |
| EcoRII | CCWGG | 4 cut(s) | 376, 1102, 1612, 1762 |
| EcoRV | GATATC | 1 cut(s) | 3864 |
| EcoT14I | CCWWGG | 3 cut(s) | 384, 2695, 3052 |
| EcoT22I | ATGCAT | 2 cut(s) | 630, 2249 |
| EcoT38I | GRGCYC | 3 cut(s) | 63, 3090, 3875 |
| EgeI | GGCGCC | 1 cut(s) | 151 |
| EheI | GGCGCC | 1 cut(s) | 151 |
| ErhI | CCWWGG | 3 cut(s) | 384, 2695, 3052 |
| Esp3I | CGTCTC | 1 cut(s) | 1055 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2286, 2318, 3581, 3613, 3920, 3952 |
| FaqI | GGGAC | 6 cut(s) | 608, 919, 982, 1756, 3070, 3962 |
| FauNDI | CATATG | 1 cut(s) | 2353 |
| FbaI | TGATCA | 3 cut(s) | 867, 1897, 2305 |
| FblI | GTMKAC | 4 cut(s) | 171, 711, 818, 1403 |
| FokI | GGATG | 7 cut(s) | 98, 269, 659, 940, 2798, 2903, 4115 |
| FriOI | GRGCYC | 3 cut(s) | 63, 3090, 3875 |
| GlaI | GCGC | 3 cut(s) | 151, 239, 3493 |
| GsaI | CCCAGC | 3 cut(s) | 2600, 2832, 2890 |
| GsuI | CTGGAG | 7 cut(s) | 399, 1037, 1086, 1785, 2488, 3143, 3666 |
| HaeII | RGCGCY | 2 cut(s) | 153, 3495 |
| HaeIII | GGCC | 6 cut(s) | 1378, 2622, 2915, 2944, 3017, 3027 |
| HgaI | GACGC | 2 cut(s) | 398, 467 |
| HhaI | GCGC | 3 cut(s) | 152, 240, 3494 |
| Hin1I | GRCGYC | 5 cut(s) | 150, 279, 390, 459, 708 |
| Hin6I | GCGC | 3 cut(s) | 150, 238, 3492 |
| HinP1I | GCGC | 3 cut(s) | 150, 238, 3492 |
| HincII | GTYRAC | 5 cut(s) | 172, 553, 670, 712, 2482 |
| HindII | GTYRAC | 5 cut(s) | 172, 553, 670, 712, 2482 |
| HindIII | AAGCTT | 1 cut(s) | 917 |
| HphI | GGTGA | 8 cut(s) | 409, 481, 941, 1661, 1870, 2419, 3587, 3962 |
| Hpy99I | CGWCG | 6 cut(s) | 173, 281, 368, 713, 716, 719 |
| HpyAV | CCTTC | 9 cut(s) | 186, 280, 1133, 1301, 1380, 1522, 2246, 3922, 4006 |
| HpyCH4IV | ACGT | 8 cut(s) | 141, 168, 279, 422, 584, 607, 708, 1697 |
| HpySE526I | ACGT | 8 cut(s) | 141, 168, 279, 422, 584, 607, 708, 1697 |
| Hsp92I | GRCGYC | 5 cut(s) | 150, 279, 390, 459, 708 |
| HspAI | GCGC | 3 cut(s) | 150, 238, 3492 |
| KasI | GGCGCC | 1 cut(s) | 149 |
| Kpn2I | TCCGGA | 2 cut(s) | 1573, 1734 |
| Ksp22I | TGATCA | 3 cut(s) | 867, 1897, 2305 |
| LguI | GCTCTTC | 1 cut(s) | 3541 |
| LmnI | GCTCC | 7 cut(s) | 380, 489, 1105, 1106, 2241, 3085, 4093 |
| Lsp1109I | GCAGC | 9 cut(s) | 493, 859, 2179, 2499, 2530, 2533, 2812, 2834, 3555 |
| LweI | GCATC | 6 cut(s) | 459, 1103, 2530, 2596, 2674, 2776 |
| MaeII | ACGT | 8 cut(s) | 141, 168, 279, 422, 584, 607, 708, 1697 |
| MaeIII | GTNAC | 8 cut(s) | 125, 198, 585, 1393, 1758, 2664, 3149, 3240 |
| MbiI | CCGCTC | 1 cut(s) | 1786 |
| MfeI | CAATTG | 2 cut(s) | 2031, 3688 |
| MflI | RGATCY | 4 cut(s) | 1576, 1978, 3048, 3472 |
| MhlI | GDGCHC | 6 cut(s) | 63, 545, 963, 1276, 3090, 3875 |
| Mly113I | GGCGCC | 1 cut(s) | 150 |
| MlyI | GAGTC | 8 cut(s) | 60, 122, 327, 366, 1458, 1778, 2459, 3437 |
| MmeI | TCCRAC | 6 cut(s) | 156, 432, 669, 3088, 3200, 3732 |
| Mph1103I | ATGCAT | 2 cut(s) | 630, 2249 |
| MroI | TCCGGA | 2 cut(s) | 1573, 1734 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2756 |
| MseI | TTAA | 9 cut(s) | 1428, 1544, 2492, 2499, 2570, 2643, 3378, 3642, 3809 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3923 |
| MspA1I | CMGCKG | 1 cut(s) | 2825 |
| MspCI | CTTAAG | 3 cut(s) | 1543, 2498, 3377 |
| MspR9I | CCNGG | 9 cut(s) | 158, 378, 983, 1104, 1614, 1764, 3080, 3875, 3876 |
| MunI | CAATTG | 2 cut(s) | 2031, 3688 |
| Mva1269I | GAATGC | 1 cut(s) | 2249 |
| MvaI | CCWGG | 4 cut(s) | 378, 1104, 1614, 1764 |
| MvnI | CGCG | 3 cut(s) | 878, 3328, 3763 |
| NarI | GGCGCC | 1 cut(s) | 150 |
| NciI | CCSGG | 5 cut(s) | 158, 983, 3080, 3875, 3876 |
| NdeI | CATATG | 1 cut(s) | 2353 |
| NlaIV | GGNNCC | 6 cut(s) | 97, 151, 382, 1273, 1578, 2930 |
| NmeAIII | GCCGAG | 1 cut(s) | 3583 |
| NmuCI | GTSAC | 5 cut(s) | 125, 198, 585, 2664, 3149 |
| NsiI | ATGCAT | 2 cut(s) | 630, 2249 |
| NspI | RCATGY | 3 cut(s) | 79, 2219, 3776 |
| NspV | TTCGAA | 2 cut(s) | 914, 3883 |
| PaeI | GCATGC | 2 cut(s) | 79, 2219 |
| PagI | TCATGA | 2 cut(s) | 1320, 2953 |
| PceI | AGGCCT | 1 cut(s) | 3027 |
| PciSI | GCTCTTC | 1 cut(s) | 3541 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 360 |
| PctI | GAATGC | 1 cut(s) | 2249 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2756 |
| PflFI | GACNNNGTC | 2 cut(s) | 167, 296 |
| PfoI | TCCNGGA | 2 cut(s) | 1102, 3078 |
| Ple19I | CGATCG | 1 cut(s) | 882 |
| PleI | GAGTC | 8 cut(s) | 60, 122, 326, 365, 1458, 1777, 2458, 3436 |
| PluTI | GGCGCC | 1 cut(s) | 153 |
| PmaCI | CACGTG | 1 cut(s) | 423 |
| PmlI | CACGTG | 1 cut(s) | 423 |
| PpsI | GAGTC | 8 cut(s) | 60, 122, 326, 365, 1458, 1777, 2458, 3436 |
| Ppu21I | YACGTR | 1 cut(s) | 423 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1728, 3293 |
| PshBI | ATTAAT | 1 cut(s) | 2643 |
| PsiI | TTATAA | 2 cut(s) | 1148, 1512 |
| Psp124BI | GAGCTC | 2 cut(s) | 63, 3090 |
| Psp1406I | AACGTT | 1 cut(s) | 1697 |
| Psp6I | CCWGG | 4 cut(s) | 376, 1102, 1612, 1762 |
| PspCI | CACGTG | 1 cut(s) | 423 |
| PspEI | GGTNACC | 1 cut(s) | 1758 |
| PspFI | CCCAGC | 3 cut(s) | 2596, 2828, 2886 |
| PspGI | CCWGG | 4 cut(s) | 376, 1102, 1612, 1762 |
| PspN4I | GGNNCC | 6 cut(s) | 97, 151, 382, 1273, 1578, 2930 |
| PspPI | GGNCC | 3 cut(s) | 1376, 2180, 3415 |
| PstI | CTGCAG | 4 cut(s) | 483, 1160, 2206, 2365 |
| PstNI | CAGNNNCTG | 5 cut(s) | 2192, 2828, 3147, 3431, 3476 |
| PsuI | RGATCY | 4 cut(s) | 1576, 1978, 3048, 3472 |
| PsyI | GACNNNGTC | 2 cut(s) | 167, 296 |
| PvuI | CGATCG | 1 cut(s) | 882 |
| PvuII | CAGCTG | 1 cut(s) | 2825 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3923 |
| SacI | GAGCTC | 2 cut(s) | 63, 3090 |
| SalI | GTCGAC | 2 cut(s) | 170, 710 |
| SapI | GCTCTTC | 1 cut(s) | 3541 |
| SaqAI | TTAA | 9 cut(s) | 1428, 1544, 2492, 2499, 2570, 2643, 3378, 3642, 3809 |
| Sau96I | GGNCC | 3 cut(s) | 1376, 2180, 3415 |
| ScaI | AGTACT | 4 cut(s) | 1541, 3582, 3758, 3963 |
| SchI | GAGTC | 8 cut(s) | 60, 122, 327, 366, 1458, 1778, 2459, 3437 |
| ScrFI | CCNGG | 9 cut(s) | 158, 378, 983, 1104, 1614, 1764, 3080, 3875, 3876 |
| SduI | GDGCHC | 6 cut(s) | 63, 545, 963, 1276, 3090, 3875 |
| SfaNI | GCATC | 6 cut(s) | 459, 1103, 2530, 2596, 2674, 2776 |
| SfcI | CTRYAG | 6 cut(s) | 479, 1156, 1830, 2202, 2361, 3487 |
| SfoI | GGCGCC | 1 cut(s) | 151 |
| SfuI | TTCGAA | 2 cut(s) | 914, 3883 |
| SgrDI | CGTCGACG | 1 cut(s) | 710 |
| SinI | GGWCC | 2 cut(s) | 2180, 3415 |
| SmaI | CCCGGG | 1 cut(s) | 3876 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3923 |
| SpeI | ACTAGT | 1 cut(s) | 3973 |
| SphI | GCATGC | 2 cut(s) | 79, 2219 |
| SseBI | AGGCCT | 1 cut(s) | 3027 |
| SspDI | GGCGCC | 1 cut(s) | 149 |
| SstI | GAGCTC | 2 cut(s) | 63, 3090 |
| StuI | AGGCCT | 1 cut(s) | 3027 |
| StyD4I | CCNGG | 9 cut(s) | 156, 376, 981, 1102, 1612, 1762, 3078, 3873, 3874 |
| StyI | CCWWGG | 3 cut(s) | 384, 2695, 3052 |
| TaiI | ACGT | 8 cut(s) | 144, 171, 282, 425, 587, 610, 711, 1700 |
| TatI | WGTACW | 7 cut(s) | 618, 1539, 2849, 3580, 3756, 3840, 3961 |
| TauI | GCSGC | 6 cut(s) | 120, 155, 308, 311, 515, 2625 |
| Tru1I | TTAA | 9 cut(s) | 1428, 1544, 2492, 2499, 2570, 2643, 3378, 3642, 3809 |
| Tru9I | TTAA | 9 cut(s) | 1428, 1544, 2492, 2499, 2570, 2643, 3378, 3642, 3809 |
| TseFI | GTSAC | 5 cut(s) | 125, 198, 585, 2664, 3149 |
| TseI | GCWGC | 9 cut(s) | 481, 847, 2192, 2512, 2543, 2546, 2822, 2825, 3543 |
| Tsp45I | GTSAC | 5 cut(s) | 125, 198, 585, 2664, 3149 |
| TspMI | CCCGGG | 1 cut(s) | 3874 |
| Tth111I | GACNNNGTC | 2 cut(s) | 167, 296 |
| Vha464I | CTTAAG | 3 cut(s) | 1543, 2498, 3377 |
| VneI | GTGCAC | 2 cut(s) | 541, 959 |
| VpaK11BI | GGWCC | 2 cut(s) | 2180, 3415 |
| VspI | ATTAAT | 1 cut(s) | 2643 |
| XapI | RAATTY | 9 cut(s) | 1454, 1810, 2135, 2310, 2330, 2534, 2708, 2774, 3556 |
| XbaI | TCTAGA | 1 cut(s) | 1618 |
| XceI | RCATGY | 3 cut(s) | 79, 2219, 3776 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 17 |
| XmaI | CCCGGG | 1 cut(s) | 3874 |
| XmiI | GTMKAC | 4 cut(s) | 171, 711, 818, 1403 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2756 |
| ZraI | GACGTC | 2 cut(s) | 280, 709 |
| ZrmI | AGTACT | 4 cut(s) | 1541, 3582, 3758, 3963 |
| Zsp2I | ATGCAT | 2 cut(s) | 630, 2249 |