Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0010443

Physical Location & Seq

Genomic Coordinates Forward (+)

4079207 .. 4081957

Gene Structure 2751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG056100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGATACAAGCCCTTCAGGGGCCATATCCTGTTGAAATTACTGAATATACGCCATTTTGGGAAGATGAGGCCAAAGAGGATTCGGAAACTTGGGTGGAGTTCGTAAGACTTCGAAAAGCACAGAAGAAGAAAATATTGATTGCTGGACACCATTATAATCGAGATGAAAAGAAGGGAATGGAGTACTTAAAACTTACCAAATTAGTCTCTGATCCTCCGGATCCAAAGGCTCTGGCTTTCTTCTTCCGGTACACTCCTGGTCTAGACAAGATGCTGATAGGGGATTATCTTGGTGATCCTGACGAGTTTCATATTGAAGTTCTAAGAGAATATACTGAAACCTTTGGATTTGCAGGCATGAATCTTGACAGTGGTTTCCGGACTTTTCTTGAGACTTTCCGTTTACCAGGAGAGTCCCAGAAGATTGAGCGGATTCTCGAAGTATTTTCAGAGAATTTTTATGAACAACAACCTACAGATATTTTTGCAAACAAGGATACGGTGCTCATTCTTTGCTACTCTCTCATTATGCTCAATACTGATCAACACAATCCACAAGTGAAGAAGAAAATGACAGAAGACGAGTTCATCAGGAACAATAGAGCAATCAATGGAGGAAAGGATCTTCCTAGAGAGTATCTATCTGAGCTTTTCCATTCCATCTCACACAATGCATTCACCACGTTTGGTTTGCAGGTAGAAATGAACCCAAGCAAATGGATCGAGTTGATGAACCGAACAAAAACTGTGCAACCTTACTTTCTATGTGAATTTGATCGCCGTCTAGGAAGAGATATGTTTGCTTGCATTGCTGGTCCATCTGTGGCGGCTCTTTCTGCAGTATTTGAGCATGCTGAAGAAGAGGAATTGCTCCATGAATGCATTGAAGGGATGTTCTCGGTGGCCAGGGTAGCTCAGTATGGACTAGAAGACACTCTTGATGAACTTATCGCCACATTCTCCAAATTCACTACATTGTTGAATCCTTATGCCTCTGCAGAAGAAACCCTCTTTGCTTTTAGCAAAGATTTGAAGCCAAGAATGGCTACACTTGCTGTTTTCACCATTGCAAACAATTTTGGAGAGTCAATTAGAGGGGGCTGGAGGAACATTGTTGAATGCTTGTTGAAACTTAAGAGGCTAAAGCTGCTTCCACAGTCTGCCATTGAATTTGATGCTGCTTCCACCTCATCGGAGAACTTAAAATCTGAATCCGGTATAATCTTCCCAGCTCATGATCCCAGGTTTGGAGGCCGCCCAGCTGGCATGATTAATCGGTTCTCACATTTTATGTCACTAGAGAGTGCAGAAGATGCTGTATCCCTTGGCATTAGTGAATTTGAACAAAATCTCAAGGTTATCAAACAATGCCGAATTGGGAACATCTTCAGCAATACTTCAAACTTTCCTGAAGTTGCTTTGCTCAATCTTGGGCGTTCTTTGATATATGCAGCTGCTGGGAAAGGGCAAAAGTTTAGTACAGCAATTGAAGAAGAAGAAACTGTCGGTTTCTCCTGGGATTTAATAGTTGCAATCACTTTGGCCAACAATCATAGGTTCCAGACATTTTGGCCTCATTTTCATGATTATCTGATTGTGGTTGCTCAGTTTCCCATGTTCTCCCCTATTCCATTTGCTGAAAAGGCCATTGTAGGGCTCTTCAAGATATGTCTGACGATCCTTGAGACTCACCGAGCTGACAAAATCCCCGAGGAACTCATTTTCAAGTCAATAAATCTAATGTGGAAGCTGGAAAAAGAGATTCTAGACACTTGCTGTGACTTCATAACTCAATCACTAAACAGGATTCTGATTGAGTACCCTGCCAATTTGCAGACCCAACTCGGTTGGAAGTCAGTTCTCCACTTATTATCAGTCTCTGGGAGACACCCCGAATGCTATGAACTAGGTGTTGAGACACTTATCTCGTTGATGTCTGATGGAACTCATGTTTCGCGGACAAATTATGCTTACTGCATTGATTGTGCCTTTGGTTTTATTGCCCTTAAGAACAGTCCATTGGAGAAGAACATAAAGATACTGGACCTGTTAGCAGAGTCTGTAAACTTCTTGATCCAGTGGTATAGAAACCACTACTCAGATCCTGGGAACAGCTACAGCAACTCCTCTTTAGAGGATGCAAAAGGTTTTGGCTCTTCCTGCAGCTTTGCCATGAATTTGTTTGTCAAACTTGGAGAGGCATTTAGAAAGTCCAGTTTAGCTCGGCGAGAAGAGATGAGAAACCATGCAATTCTATGTCTTCAAAAGAGTTTCAAACTTGCTGAGGAATTGGACTTCACTCCAACCAATTGCATCAACTGTTTCAACCTTGTTGTTTTCGCAATGGTTGATGATCTACATGAAAAAATGTTGGAGTACTCGCGTAGGGAAAACGCGGAGAAGGAGATGAGAGGCATGGAAGGGACCTTAAAGGTTGCATTGAAGCTCTTGACAGAAGTGTACCTGCAATTCTTGAAACAGATATCACAGAGTCCCGGGTTTCGAACATTTTGGTTAGGAGTGTTGAGAAGAATGGACACTTGTATGAAGGCTGATTTAGGTGGATATGGTGAATCAACAACACTGCAAGAACTAGTCCCGGATTTGTTGAGACAGATGATTACAGAGATGAAGGAAAAAGAGATTCTAGTGCAAAAGGAAGATGATGACCTTTGGGAGATAACACATATTCAGATACAGTGGATAGCTCCTGCAATCAAGGAGGAGCTTTTTCCAGAAGAAAACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0008150 GO:0009846 GO:0009856 GO:0012505 GO:0016020 GO:0016192 GO:0019899 GO:0022414 GO:0031984 GO:0032501 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0051020 GO:0051179 GO:0051234 GO:0051704 GO:0065007 GO:0065009 GO:0090406 GO:0098772 GO:0098791 GO:0120025

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

DCB Sec7 Sec7_N

Protein Analysis

916

Amino Acids

104.94

Weight (kDa)

5.25

Isoelectric Point (pI)

46.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec7	PF01369	41 - 225	5.8e-67	Sec7 domain
TPR_28	PF23325	738 - 892	3.8e-06	GBF1-like, tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19610
fragaria_vesca	FvH4_1g05140
malus_domestica	MD02G1050300.v1.1 MD15G1187600.v1.1
prunus_persica	Prupe.7G228800_v2.0.a1
pyrus_communis	pycom02g04190 pycom02g04200 pycom15g16840
rosa_chinensis	RchiOBHm_Chr2g0090771 RchiOBHm_Chr2g0090781
rosa_laevigata	RLG00000016142
rosa_multiflora	Rmu_co8351113.1_g000001 Rmu_ssc0000367.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150830
rosa_rugosa	Rorug02G0010400
rosa_samantha	Rh2AG056400 Rh2BG055100 Rh2CG057500 Rh2DG056000 Rh2DG056100
rosa_wichuraiana	Rw2G004610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	156
Acc36I	ACCTGC	2 cut(s)	685, 2472
AccBSI	CCGCTC	1 cut(s)	430
AccII	CGCG	3 cut(s)	1957, 2383, 2396
AccIII	TCCGGA	2 cut(s)	217, 378
AciI	CCGC	5 cut(s)	430, 827, 1255, 1957, 2396
AcoI	YGGCCR	2 cut(s)	903, 1542
AcsI	RAATTY	6 cut(s)	454, 770, 965, 1169, 1337, 2176
AcuI	CTGAAG	3 cut(s)	876, 1372, 1431
AfaI	GTAC	6 cut(s)	185, 251, 1480, 1820, 2378, 2462
AfiI	CCNNNNNNNGG	3 cut(s)	18, 1247, 1653
AflII	CTTAAG	2 cut(s)	1133, 2006
AhlI	ACTAGT	1 cut(s)	2593
AjnI	CCWGG	6 cut(s)	256, 406, 905, 1241, 1514, 2104
AjuI	GAANNNNNNNTTGG	2 cut(s)	2003, 2035
Alw21I	GWGCWC	1 cut(s)	507
Alw26I	GTCTC	7 cut(s)	211, 386, 1679, 1879, 1882, 1910, 2605
AlwNI	CAGNNNCTG	4 cut(s)	1457, 1880, 2060, 2105
Ama87I	CYCGRG	2 cut(s)	1709, 2495
Aor13HI	TCCGGA	2 cut(s)	217, 378
AoxI	GGCC	7 cut(s)	20, 69, 903, 1252, 1542, 1571, 1644
ApeKI	GCWGC	5 cut(s)	1147, 1178, 1451, 1454, 2163
ApoI	RAATTY	6 cut(s)	454, 770, 965, 1169, 1337, 2176
AseI	ATTAAT	1 cut(s)	1272
Asp700I	GAANNNNTTC	1 cut(s)	1385
AspS9I	GGNCC	4 cut(s)	20, 815, 2044, 2424
AsuC2I	CCSGG	3 cut(s)	2496, 2497, 2600
AsuHPI	GGTGA	5 cut(s)	305, 670, 1054, 1682, 2582
AsuII	TTCGAA	2 cut(s)	112, 2503
AvaI	CYCGRG	2 cut(s)	1709, 2495
AvaII	GGWCC	3 cut(s)	815, 2044, 2424
BalI	TGGCCA	2 cut(s)	905, 1544
BamHI	GGATCC	1 cut(s)	220
BanII	GRGCYC	1 cut(s)	1659
BbsI	GAAGAC	3 cut(s)	585, 936, 2252
Bbv12I	GWGCWC	1 cut(s)	507
BbvCI	CCTCAGC	1 cut(s)	2283
BbvI	GCAGC	5 cut(s)	1134, 1165, 1441, 1463, 2175
BccI	CCATC	3 cut(s)	668, 826, 1934
BceAI	ACGGC	1 cut(s)	765
BcgI	CGANNNNNNTGC	2 cut(s)	703, 737
BciT130I	CCWGG	6 cut(s)	258, 408, 907, 1243, 1516, 2106
BciVI	GTATCC	2 cut(s)	490, 1330
BclI	TGATCA	1 cut(s)	541
BcnI	CCSGG	3 cut(s)	2496, 2497, 2600
BcoDI	GTCTC	7 cut(s)	211, 386, 1679, 1879, 1882, 1910, 2605
BcuI	ACTAGT	1 cut(s)	2593
BfaI	CTAG	9 cut(s)	263, 630, 785, 926, 1298, 1766, 1907, 2594, 2648
BfmI	CTRYAG	5 cut(s)	474, 837, 996, 2116, 2161
BfrI	CTTAAG	2 cut(s)	1133, 2006
BfuAI	ACCTGC	2 cut(s)	685, 2472
BfuI	GTATCC	2 cut(s)	490, 1330
BglI	GCCNNNNNGGC	1 cut(s)	1263
BisI	GCNGC	7 cut(s)	828, 1148, 1179, 1255, 1452, 1455, 2164
BlsI	GCNGC	7 cut(s)	829, 1149, 1180, 1256, 1453, 1456, 2165
BmcAI	AGTACT	2 cut(s)	185, 2378
Bme1390I	CCNGG	9 cut(s)	258, 408, 907, 1243, 1516, 2106, 2496, 2497, 2600
Bme18I	GGWCC	3 cut(s)	815, 2044, 2424
BmeT110I	CYCGRG	2 cut(s)	1709, 2495
BmgT120I	GGNCC	4 cut(s)	20, 815, 2044, 2424
BmiI	GGNNCC	4 cut(s)	21, 222, 1559, 2425
BmrFI	CCNGG	9 cut(s)	258, 408, 907, 1243, 1516, 2106, 2496, 2497, 2600
BmsI	GCATC	5 cut(s)	261, 1165, 1303, 2128, 2322
BpiI	GAAGAC	3 cut(s)	585, 936, 2252
BpmI	CTGGAG	1 cut(s)	1123
Bpu10I	CCTNAGC	1 cut(s)	2283
Bpu14I	TTCGAA	2 cut(s)	112, 2503
BpuEI	CTTGAG	3 cut(s)	410, 1337, 1703
BpuMI	CCSGG	3 cut(s)	2496, 2497, 2600
BsaJI	CCNNGG	7 cut(s)	906, 1241, 1324, 1515, 1710, 2105, 2495
BsaWI	WCCGGW	4 cut(s)	217, 246, 378, 1214
BsaXI	ACNNNNNCTCC	2 cut(s)	2108, 2138
Bsc4I	CCNNNNNNNGG	3 cut(s)	18, 1247, 1653
Bse1I	ACTGG	3 cut(s)	2046, 2077, 2214
Bse3DI	GCAATG	3 cut(s)	807, 1065, 2349
BseAI	TCCGGA	2 cut(s)	217, 378
BseBI	CCWGG	6 cut(s)	258, 408, 907, 1243, 1516, 2106
BseDI	CCNNGG	7 cut(s)	906, 1241, 1324, 1515, 1710, 2105, 2495
BseGI	GGATG	2 cut(s)	897, 2143
BseLI	CCNNNNNNNGG	3 cut(s)	18, 1247, 1653
BseMI	GCAATG	3 cut(s)	807, 1065, 2349
BseMII	CTCAG	5 cut(s)	636, 929, 1619, 2112, 2274
BseNI	ACTGG	3 cut(s)	2046, 2077, 2214
BseRI	GAGGAG	2 cut(s)	2116, 2738
BseXI	GCAGC	5 cut(s)	1134, 1165, 1441, 1463, 2175
BseYI	CCCAGC	3 cut(s)	1228, 1258, 1457
BsgI	GTGCAG	1 cut(s)	1326
Bsh1236I	CGCG	3 cut(s)	1957, 2383, 2396
BshFI	GGCC	7 cut(s)	22, 71, 905, 1254, 1544, 1573, 1646
BsiHKAI	GWGCWC	1 cut(s)	507
BsiHKCI	CYCGRG	2 cut(s)	1709, 2495
BsiSI	CCGG	6 cut(s)	218, 247, 379, 1215, 2496, 2600
BslFI	GGGAC	4 cut(s)	400, 2437, 2478, 2582
BslI	CCNNNNNNNGG	3 cut(s)	18, 1247, 1653
BsmAI	GTCTC	7 cut(s)	211, 386, 1679, 1879, 1882, 1910, 2605
BsmFI	GGGAC	4 cut(s)	400, 2437, 2478, 2582
BsmI	GAATGC	4 cut(s)	674, 884, 1124, 1901
BsnI	GGCC	7 cut(s)	22, 71, 905, 1254, 1544, 1573, 1646
BsoBI	CYCGRG	2 cut(s)	1709, 2495
Bsp119I	TTCGAA	2 cut(s)	112, 2503
Bsp1286I	GDGCHC	2 cut(s)	507, 1659
Bsp13I	TCCGGA	2 cut(s)	217, 378
BspACI	CCGC	5 cut(s)	430, 827, 1255, 1957, 2396
BspANI	GGCC	7 cut(s)	22, 71, 905, 1254, 1544, 1573, 1646
BspCNI	CTCAG	5 cut(s)	637, 928, 1618, 2111, 2275
BspEI	TCCGGA	2 cut(s)	217, 378
BspFNI	CGCG	3 cut(s)	1957, 2383, 2396
BspHI	TCATGA	2 cut(s)	1234, 1582
BspLI	GGNNCC	4 cut(s)	21, 222, 1559, 2425
BspMAI	CTGCAG	3 cut(s)	841, 1000, 2165
BspMI	ACCTGC	2 cut(s)	685, 2472
BspQI	GCTCTTC	2 cut(s)	1664, 2161
BspT104I	TTCGAA	2 cut(s)	112, 2503
BspTI	CTTAAG	2 cut(s)	1133, 2006
BsrBI	CCGCTC	1 cut(s)	430
BsrDI	GCAATG	3 cut(s)	807, 1065, 2349
BsrI	ACTGG	3 cut(s)	2046, 2077, 2214
BssECI	CCNNGG	7 cut(s)	906, 1241, 1324, 1515, 1710, 2105, 2495
BssT1I	CCWWGG	1 cut(s)	1324
Bst2UI	CCWGG	6 cut(s)	258, 408, 907, 1243, 1516, 2106
Bst4CI	ACNGT	8 cut(s)	371, 502, 748, 1158, 1504, 2015, 2321, 2700
Bst6I	CTCTTC	5 cut(s)	784, 855, 1664, 2161, 2226
BstAFI	CTTAAG	2 cut(s)	1133, 2006
BstAPI	GCANNNNNTGC	1 cut(s)	1313
BstBI	TTCGAA	2 cut(s)	112, 2503
BstC8I	GCNNGC	4 cut(s)	355, 805, 852, 1264
BstDEI	CTNAG	6 cut(s)	323, 645, 915, 1605, 2098, 2283
BstF5I	GGATG	2 cut(s)	897, 2143
BstFNI	CGCG	3 cut(s)	1957, 2383, 2396
BstMAI	GTCTC	7 cut(s)	211, 386, 1679, 1879, 1882, 1910, 2605
BstMWI	GCNNNNNNNGC	9 cut(s)	809, 836, 911, 1052, 1147, 1263, 1313, 1643, 2160
BstNI	CCWGG	6 cut(s)	258, 408, 907, 1243, 1516, 2106
BstNSI	RCATGY	1 cut(s)	854
BstSCI	CCNGG	9 cut(s)	256, 406, 905, 1241, 1514, 2104, 2494, 2495, 2598
BstSFI	CTRYAG	5 cut(s)	474, 837, 996, 2116, 2161
BstUI	CGCG	3 cut(s)	1957, 2383, 2396
BstV1I	GCAGC	5 cut(s)	1134, 1165, 1441, 1463, 2175
BstV2I	GAAGAC	3 cut(s)	585, 936, 2252
BstX2I	RGATCY	3 cut(s)	220, 622, 2101
BstXI	CCANNNNNNTGG	1 cut(s)	717
BstYI	RGATCY	3 cut(s)	220, 622, 2101
BsuI	GTATCC	2 cut(s)	490, 1330
BsuRI	GGCC	7 cut(s)	22, 71, 905, 1254, 1544, 1573, 1646
BtsCI	GGATG	2 cut(s)	897, 2143
BtsI	GCAGTG	1 cut(s)	2582
BtsIMutI	CAGTG	4 cut(s)	376, 2084, 2582, 2705
BveI	ACCTGC	2 cut(s)	685, 2472
Cac8I	GCNNGC	4 cut(s)	355, 805, 852, 1264
CaiI	CAGNNNCTG	4 cut(s)	1457, 1880, 2060, 2105
CciI	TCATGA	2 cut(s)	1234, 1582
Cfr13I	GGNCC	4 cut(s)	20, 815, 2044, 2424
Cfr9I	CCCGGG	1 cut(s)	2495
Csp6I	GTAC	6 cut(s)	184, 250, 1479, 1819, 2377, 2461
CviQI	GTAC	6 cut(s)	184, 250, 1479, 1819, 2377, 2461
DdeI	CTNAG	6 cut(s)	323, 645, 915, 1605, 2098, 2283
EaeI	YGGCCR	2 cut(s)	903, 1542
Eam1104I	CTCTTC	5 cut(s)	784, 855, 1664, 2161, 2226
EarI	CTCTTC	5 cut(s)	784, 855, 1664, 2161, 2226
Eco130I	CCWWGG	1 cut(s)	1324
Eco24I	GRGCYC	1 cut(s)	1659
Eco32I	GATATC	1 cut(s)	2484
Eco47I	GGWCC	3 cut(s)	815, 2044, 2424
Eco57I	CTGAAG	3 cut(s)	876, 1372, 1431
Eco88I	CYCGRG	2 cut(s)	1709, 2495
EcoO109I	RGGNCCY	1 cut(s)	2424
EcoRII	CCWGG	6 cut(s)	256, 406, 905, 1241, 1514, 2104
EcoRV	GATATC	1 cut(s)	2484
EcoT14I	CCWWGG	1 cut(s)	1324
EcoT22I	ATGCAT	2 cut(s)	676, 884
EcoT38I	GRGCYC	1 cut(s)	1659
ErhI	CCWWGG	1 cut(s)	1324
FalI	AAGNNNNNCTT	2 cut(s)	921, 953
FaqI	GGGAC	4 cut(s)	400, 2437, 2478, 2582
FbaI	TGATCA	1 cut(s)	541
Fnu4HI	GCNGC	7 cut(s)	828, 1148, 1179, 1255, 1452, 1455, 2164
FokI	GGATG	2 cut(s)	904, 2150
FriOI	GRGCYC	1 cut(s)	1659
Fsp4HI	GCNGC	7 cut(s)	828, 1148, 1179, 1255, 1452, 1455, 2164
FspBI	CTAG	9 cut(s)	263, 630, 785, 926, 1298, 1766, 1907, 2594, 2648
GluI	GCNGC	7 cut(s)	828, 1148, 1179, 1255, 1452, 1455, 2164
GsaI	CCCAGC	3 cut(s)	1232, 1262, 1461
GsuI	CTGGAG	1 cut(s)	1123
HaeIII	GGCC	7 cut(s)	22, 71, 905, 1254, 1544, 1573, 1646
HapII	CCGG	6 cut(s)	218, 247, 379, 1215, 2496, 2600
HpaII	CCGG	6 cut(s)	218, 247, 379, 1215, 2496, 2600
HphI	GGTGA	5 cut(s)	305, 670, 1054, 1682, 2582
Hpy166II	GTNNAC	4 cut(s)	252, 404, 2065, 2461
Hpy8I	GTNNAC	4 cut(s)	252, 404, 2065, 2461
HpyAV	CCTTC	7 cut(s)	23, 166, 881, 2395, 2414, 2542, 2626
HpyCH4III	ACNGT	8 cut(s)	371, 502, 748, 1158, 1504, 2015, 2321, 2700
HpyCH4IV	ACGT	1 cut(s)	683
HpyF10VI	GCNNNNNNNGC	9 cut(s)	809, 836, 911, 1052, 1147, 1263, 1313, 1643, 2160
HpyF3I	CTNAG	6 cut(s)	323, 645, 915, 1605, 2098, 2283
HpySE526I	ACGT	1 cut(s)	683
Kpn2I	TCCGGA	2 cut(s)	217, 378
Ksp22I	TGATCA	1 cut(s)	541
LguI	GCTCTTC	2 cut(s)	1664, 2161
LmnI	GCTCC	3 cut(s)	876, 2713, 2725
Lsp1109I	GCAGC	5 cut(s)	1134, 1165, 1441, 1463, 2175
LweI	GCATC	5 cut(s)	261, 1165, 1303, 2128, 2322
MaeI	CTAG	9 cut(s)	263, 630, 785, 926, 1298, 1766, 1907, 2594, 2648
MaeII	ACGT	1 cut(s)	683
MaeIII	GTNAC	2 cut(s)	1293, 1778
MbiI	CCGCTC	1 cut(s)	430
MfeI	CAATTG	2 cut(s)	1485, 2308
MflI	RGATCY	3 cut(s)	220, 622, 2101
MhlI	GDGCHC	2 cut(s)	507, 1659
MlsI	TGGCCA	2 cut(s)	905, 1544
MluNI	TGGCCA	2 cut(s)	905, 1544
MlyI	GAGTC	5 cut(s)	422, 1094, 1681, 2066, 2500
MmeI	TCCRAC	3 cut(s)	1829, 2327, 2352
Mox20I	TGGCCA	2 cut(s)	905, 1544
Mph1103I	ATGCAT	2 cut(s)	676, 884
MroI	TCCGGA	2 cut(s)	217, 378
MroXI	GAANNNNTTC	1 cut(s)	1385
MscI	TGGCCA	2 cut(s)	905, 1544
MseI	TTAA	7 cut(s)	188, 1134, 1202, 1272, 1523, 2007, 2429
MslI	CAYNNNNRTG	2 cut(s)	1581, 2543
Msp20I	TGGCCA	2 cut(s)	905, 1544
MspA1I	CMGCKG	2 cut(s)	1262, 1454
MspCI	CTTAAG	2 cut(s)	1133, 2006
MspI	CCGG	6 cut(s)	218, 247, 379, 1215, 2496, 2600
MspR9I	CCNGG	9 cut(s)	258, 408, 907, 1243, 1516, 2106, 2496, 2497, 2600
MunI	CAATTG	2 cut(s)	1485, 2308
Mva1269I	GAATGC	4 cut(s)	674, 884, 1124, 1901
MvaI	CCWGG	6 cut(s)	258, 408, 907, 1243, 1516, 2106
MvnI	CGCG	3 cut(s)	1957, 2383, 2396
MwoI	GCNNNNNNNGC	9 cut(s)	809, 836, 911, 1052, 1147, 1263, 1313, 1643, 2160
NciI	CCSGG	3 cut(s)	2496, 2497, 2600
NlaIV	GGNNCC	4 cut(s)	21, 222, 1559, 2425
NmeAIII	GCCGAG	1 cut(s)	2203
NmuCI	GTSAC	2 cut(s)	1293, 1778
NsiI	ATGCAT	2 cut(s)	676, 884
NspI	RCATGY	1 cut(s)	854
NspV	TTCGAA	2 cut(s)	112, 2503
PaeI	GCATGC	1 cut(s)	854
PagI	TCATGA	2 cut(s)	1234, 1582
PciSI	GCTCTTC	2 cut(s)	1664, 2161
PctI	GAATGC	4 cut(s)	674, 884, 1124, 1901
PdmI	GAANNNNTTC	1 cut(s)	1385
PfeI	GAWTC	9 cut(s)	80, 361, 433, 982, 1211, 1762, 1807, 2573, 2644
PfoI	TCCNGGA	1 cut(s)	2598
PkrI	GCNGC	7 cut(s)	829, 1149, 1180, 1256, 1453, 1456, 2165
PleI	GAGTC	5 cut(s)	421, 1093, 1681, 2065, 2499
PpsI	GAGTC	5 cut(s)	421, 1093, 1681, 2065, 2499
PpuMI	RGGWCCY	1 cut(s)	2424
PshBI	ATTAAT	1 cut(s)	1272
PsiI	TTATAA	1 cut(s)	156
Psp5II	RGGWCCY	1 cut(s)	2424
Psp6I	CCWGG	6 cut(s)	256, 406, 905, 1241, 1514, 2104
PspFI	CCCAGC	3 cut(s)	1228, 1258, 1457
PspGI	CCWGG	6 cut(s)	256, 406, 905, 1241, 1514, 2104
PspN4I	GGNNCC	4 cut(s)	21, 222, 1559, 2425
PspPI	GGNCC	4 cut(s)	20, 815, 2044, 2424
PspPPI	RGGWCCY	1 cut(s)	2424
PstI	CTGCAG	3 cut(s)	841, 1000, 2165
PstNI	CAGNNNCTG	4 cut(s)	1457, 1880, 2060, 2105
PsuI	RGATCY	3 cut(s)	220, 622, 2101
PvuII	CAGCTG	2 cut(s)	1262, 1454
RsaI	GTAC	6 cut(s)	185, 251, 1480, 1820, 2378, 2462
RsaNI	GTAC	6 cut(s)	184, 250, 1479, 1819, 2377, 2461
RseI	CAYNNNNRTG	2 cut(s)	1581, 2543
SapI	GCTCTTC	2 cut(s)	1664, 2161
SaqAI	TTAA	7 cut(s)	188, 1134, 1202, 1272, 1523, 2007, 2429
SatI	GCNGC	7 cut(s)	828, 1148, 1179, 1255, 1452, 1455, 2164
Sau96I	GGNCC	4 cut(s)	20, 815, 2044, 2424
ScaI	AGTACT	2 cut(s)	185, 2378
SchI	GAGTC	5 cut(s)	422, 1094, 1681, 2066, 2500
ScrFI	CCNGG	9 cut(s)	258, 408, 907, 1243, 1516, 2106, 2496, 2497, 2600
SduI	GDGCHC	2 cut(s)	507, 1659
SfaNI	GCATC	5 cut(s)	261, 1165, 1303, 2128, 2322
SfcI	CTRYAG	5 cut(s)	474, 837, 996, 2116, 2161
SfuI	TTCGAA	2 cut(s)	112, 2503
SinI	GGWCC	3 cut(s)	815, 2044, 2424
SmaI	CCCGGG	1 cut(s)	2497
SmiMI	CAYNNNNRTG	2 cut(s)	1581, 2543
SmlI	CTYRAG	5 cut(s)	389, 1133, 1352, 1682, 2006
SmoI	CTYRAG	5 cut(s)	389, 1133, 1352, 1682, 2006
SpeI	ACTAGT	1 cut(s)	2593
SphI	GCATGC	1 cut(s)	854
SsiI	CCGC	5 cut(s)	430, 827, 1255, 1957, 2396
SspI	AATATT	1 cut(s)	135
SspMI	CTAG	9 cut(s)	263, 630, 785, 926, 1298, 1766, 1907, 2594, 2648
StyD4I	CCNGG	9 cut(s)	256, 406, 905, 1241, 1514, 2104, 2494, 2495, 2598
StyI	CCWWGG	1 cut(s)	1324
TaaI	ACNGT	8 cut(s)	371, 502, 748, 1158, 1504, 2015, 2321, 2700
TaiI	ACGT	1 cut(s)	686
TaqI	TCGA	5 cut(s)	112, 160, 438, 723, 2503
TatI	WGTACW	3 cut(s)	183, 1478, 2376
TauI	GCSGC	2 cut(s)	830, 1257
TfiI	GAWTC	9 cut(s)	80, 361, 433, 982, 1211, 1762, 1807, 2573, 2644
Tru1I	TTAA	7 cut(s)	188, 1134, 1202, 1272, 1523, 2007, 2429
Tru9I	TTAA	7 cut(s)	188, 1134, 1202, 1272, 1523, 2007, 2429
TscAI	CASTG	4 cut(s)	376, 2084, 2589, 2705
TseFI	GTSAC	2 cut(s)	1293, 1778
TseI	GCWGC	5 cut(s)	1147, 1178, 1451, 1454, 2163
Tsp45I	GTSAC	2 cut(s)	1293, 1778
TspGWI	ACGGA	1 cut(s)	389
TspMI	CCCGGG	1 cut(s)	2495
TspRI	CASTG	4 cut(s)	376, 2084, 2589, 2705
Vha464I	CTTAAG	2 cut(s)	1133, 2006
VpaK11BI	GGWCC	3 cut(s)	815, 2044, 2424
VspI	ATTAAT	1 cut(s)	1272
XapI	RAATTY	6 cut(s)	454, 770, 965, 1169, 1337, 2176
XbaI	TCTAGA	2 cut(s)	262, 1765
XceI	RCATGY	1 cut(s)	854
XmaI	CCCGGG	1 cut(s)	2495
XmnI	GAANNNNTTC	1 cut(s)	1385
XspI	CTAG	9 cut(s)	263, 630, 785, 926, 1298, 1766, 1907, 2594, 2648
ZrmI	AGTACT	2 cut(s)	185, 2378
Zsp2I	ATGCAT	2 cut(s)	676, 884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.