ARF guanine-nucleotide exchange factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G19610 |
| fragaria_vesca | FvH4_1g05140 |
| malus_domestica | MD02G1050300.v1.1 MD15G1187600.v1.1 |
| prunus_persica | Prupe.7G228800_v2.0.a1 |
| pyrus_communis | pycom02g04190 pycom02g04200 pycom15g16840 |
| rosa_chinensis | RchiOBHm_Chr2g0090771 RchiOBHm_Chr2g0090781 |
| rosa_laevigata | RLG00000016142 |
| rosa_multiflora | Rmu_co8351113.1_g000001 Rmu_ssc0000367.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00150830 |
| rosa_rugosa | Rorug02G0010400 |
| rosa_samantha | Rh2AG056400 Rh2BG055100 Rh2CG057500 Rh2DG056000 Rh2DG056100 |
| rosa_wichuraiana | Rw2G004610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1064, 1428 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 730 |
| AatII | GACGTC | 1 cut(s) | 198 |
| Acc36I | ACCTGC | 2 cut(s) | 945, 1957 |
| AccB1I | GGYRCC | 2 cut(s) | 65, 374 |
| AccBSI | CCGCTC | 1 cut(s) | 1702 |
| AccI | GTMKAC | 1 cut(s) | 734 |
| AccII | CGCG | 3 cut(s) | 571, 794, 3655 |
| AccIII | TCCGGA | 2 cut(s) | 1489, 1650 |
| AcoI | YGGCCR | 2 cut(s) | 2175, 2814 |
| AcsI | RAATTY | 7 cut(s) | 1726, 2042, 2237, 2441, 2609, 3448, 3740 |
| AcuI | CTGAAG | 5 cut(s) | 503, 1272, 2148, 2644, 2703 |
| AcyI | GRCGYC | 4 cut(s) | 66, 195, 306, 375 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 342, 1187, 2519, 2925, 3370 |
| AflII | CTTAAG | 2 cut(s) | 2405, 3278 |
| AflIII | ACRYGT | 1 cut(s) | 936 |
| AhlI | ACTAGT | 1 cut(s) | 3865 |
| AjnI | CCWGG | 8 cut(s) | 1018, 1528, 1678, 2177, 2513, 2786, 3376, 3735 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2760, 2792, 3275, 3307 |
| Alw21I | GWGCWC | 2 cut(s) | 1018, 1779 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 403, 2729, 3152, 3332 |
| Ama87I | CYCGRG | 2 cut(s) | 2981, 3767 |
| Aor13HI | TCCGGA | 2 cut(s) | 1489, 1650 |
| AoxI | GGCC | 8 cut(s) | 1189, 1292, 1341, 2175, 2524, 2814, 2843, 2916 |
| ApeKI | GCWGC | 6 cut(s) | 397, 763, 2419, 2450, 2723, 3435 |
| ApoI | RAATTY | 7 cut(s) | 1726, 2042, 2237, 2441, 2609, 3448, 3740 |
| AseI | ATTAAT | 1 cut(s) | 2544 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 889, 2657 |
| AspLEI | GCGC | 4 cut(s) | 68, 156, 377, 3657 |
| AspS9I | GGNCC | 5 cut(s) | 1190, 1292, 2087, 3316, 3696 |
| AsuC2I | CCSGG | 6 cut(s) | 74, 294, 899, 3768, 3769, 3872 |
| AsuHPI | GGTGA | 7 cut(s) | 325, 857, 1577, 1942, 2326, 2954, 3854 |
| AsuII | TTCGAA | 2 cut(s) | 830, 3775 |
| AvaI | CYCGRG | 2 cut(s) | 2981, 3767 |
| AvaII | GGWCC | 3 cut(s) | 2087, 3316, 3696 |
| AxyI | CCTNAGG | 1 cut(s) | 579 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1202, 1235 |
| BalI | TGGCCA | 2 cut(s) | 2177, 2816 |
| BamHI | GGATCC | 2 cut(s) | 1492, 3373 |
| BanI | GGYRCC | 2 cut(s) | 65, 374 |
| BanII | GRGCYC | 2 cut(s) | 1018, 2931 |
| BauI | CACGAG | 1 cut(s) | 499 |
| BbsI | GAAGAC | 8 cut(s) | 52, 268, 293, 359, 627, 1857, 2208, 3524 |
| Bbv12I | GWGCWC | 2 cut(s) | 1018, 1779 |
| BbvCI | CCTCAGC | 1 cut(s) | 3555 |
| BbvI | GCAGC | 6 cut(s) | 409, 775, 2406, 2437, 2735, 3447 |
| BccI | CCATC | 7 cut(s) | 317, 338, 626, 806, 1940, 2098, 3206 |
| BceAI | ACGGC | 3 cut(s) | 17, 362, 2037 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 10, 44, 1975, 2009 |
| BciT130I | CCWGG | 8 cut(s) | 1020, 1530, 1680, 2179, 2515, 2788, 3378, 3737 |
| BciVI | GTATCC | 2 cut(s) | 1762, 2602 |
| BclI | TGATCA | 3 cut(s) | 783, 1813, 3891 |
| BcnI | CCSGG | 6 cut(s) | 74, 294, 899, 3768, 3769, 3872 |
| BcuI | ACTAGT | 1 cut(s) | 3865 |
| BfmI | CTRYAG | 8 cut(s) | 395, 735, 1072, 1746, 2109, 2268, 3388, 3433 |
| BfoI | RGCGCY | 2 cut(s) | 69, 378 |
| BfrI | CTTAAG | 2 cut(s) | 2405, 3278 |
| BfuAI | ACCTGC | 2 cut(s) | 945, 1957 |
| BfuI | GTATCC | 2 cut(s) | 1762, 2602 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2535 |
| BlpI | GCTNAGC | 1 cut(s) | 3490 |
| BmcAI | AGTACT | 2 cut(s) | 1457, 3650 |
| Bme18I | GGWCC | 3 cut(s) | 2087, 3316, 3696 |
| BmeT110I | CYCGRG | 2 cut(s) | 2981, 3767 |
| BmgT120I | GGNCC | 5 cut(s) | 1190, 1292, 2087, 3316, 3696 |
| BmiI | GGNNCC | 7 cut(s) | 67, 298, 376, 1494, 2831, 3375, 3697 |
| BmrI | ACTGGG | 1 cut(s) | 42 |
| BmsI | GCATC | 5 cut(s) | 1533, 2437, 2575, 3400, 3594 |
| BmuI | ACTGGG | 1 cut(s) | 42 |
| BpiI | GAAGAC | 8 cut(s) | 52, 268, 293, 359, 627, 1857, 2208, 3524 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 225, 257 |
| BpmI | CTGGAG | 2 cut(s) | 1002, 2395 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3555 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3490 |
| Bpu14I | TTCGAA | 2 cut(s) | 830, 3775 |
| BpuEI | CTTGAG | 6 cut(s) | 95, 248, 368, 1682, 2609, 2975 |
| BpuMI | CCSGG | 6 cut(s) | 74, 294, 899, 3768, 3769, 3872 |
| BsaBI | GATNNNNATC | 1 cut(s) | 557 |
| BsaHI | GRCGYC | 4 cut(s) | 66, 195, 306, 375 |
| BsaWI | WCCGGW | 6 cut(s) | 361, 1180, 1489, 1518, 1650, 2486 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3380, 3410 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 342, 1187, 2519, 2925, 3370 |
| Bse1I | ACTGG | 4 cut(s) | 48, 1056, 3318, 3349 |
| Bse21I | CCTNAGG | 1 cut(s) | 579 |
| Bse3DI | GCAATG | 5 cut(s) | 1248, 2079, 2246, 2337, 3621 |
| Bse8I | GATNNNNATC | 1 cut(s) | 557 |
| BseAI | TCCGGA | 2 cut(s) | 1489, 1650 |
| BseBI | CCWGG | 8 cut(s) | 1020, 1530, 1680, 2179, 2515, 2788, 3378, 3737 |
| BseGI | GGATG | 5 cut(s) | 198, 757, 849, 2169, 3415 |
| BseJI | GATNNNNATC | 1 cut(s) | 557 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 342, 1187, 2519, 2925, 3370 |
| BseMI | GCAATG | 5 cut(s) | 1248, 2079, 2246, 2337, 3621 |
| BseMII | CTCAG | 5 cut(s) | 570, 1908, 2201, 2891, 3546 |
| BseNI | ACTGG | 4 cut(s) | 48, 1056, 3318, 3349 |
| BseRI | GAGGAG | 4 cut(s) | 620, 1160, 3388, 4010 |
| BseXI | GCAGC | 6 cut(s) | 409, 775, 2406, 2437, 2735, 3447 |
| BseYI | CCCAGC | 3 cut(s) | 2500, 2530, 2729 |
| BsgI | GTGCAG | 2 cut(s) | 782, 2598 |
| Bsh1236I | CGCG | 3 cut(s) | 571, 794, 3655 |
| Bsh1285I | CGRYCG | 1 cut(s) | 798 |
| BshFI | GGCC | 8 cut(s) | 1191, 1294, 1343, 2177, 2526, 2816, 2845, 2918 |
| BshNI | GGYRCC | 2 cut(s) | 65, 374 |
| BsiEI | CGRYCG | 1 cut(s) | 798 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1018, 1779 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2981, 3767 |
| BslFI | GGGAC | 6 cut(s) | 524, 835, 1672, 3709, 3750, 3854 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 342, 1187, 2519, 2925, 3370 |
| BsmFI | GGGAC | 6 cut(s) | 524, 835, 1672, 3709, 3750, 3854 |
| BsmI | GAATGC | 5 cut(s) | 826, 1946, 2156, 2396, 3173 |
| BsnI | GGCC | 8 cut(s) | 1191, 1294, 1343, 2177, 2526, 2816, 2845, 2918 |
| BsoBI | CYCGRG | 2 cut(s) | 2981, 3767 |
| Bsp119I | TTCGAA | 2 cut(s) | 830, 3775 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1018, 1779, 2931 |
| Bsp13I | TCCGGA | 2 cut(s) | 1489, 1650 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3490 |
| BspANI | GGCC | 8 cut(s) | 1191, 1294, 1343, 2177, 2526, 2816, 2845, 2918 |
| BspCNI | CTCAG | 5 cut(s) | 571, 1909, 2200, 2890, 3547 |
| BspEI | TCCGGA | 2 cut(s) | 1489, 1650 |
| BspFNI | CGCG | 3 cut(s) | 571, 794, 3655 |
| BspHI | TCATGA | 3 cut(s) | 1236, 2506, 2854 |
| BspLI | GGNNCC | 7 cut(s) | 67, 298, 376, 1494, 2831, 3375, 3697 |
| BspMAI | CTGCAG | 5 cut(s) | 399, 1076, 2113, 2272, 3437 |
| BspMI | ACCTGC | 2 cut(s) | 945, 1957 |
| BspQI | GCTCTTC | 2 cut(s) | 2936, 3433 |
| BspT104I | TTCGAA | 2 cut(s) | 830, 3775 |
| BspT107I | GGYRCC | 2 cut(s) | 65, 374 |
| BspTI | CTTAAG | 2 cut(s) | 2405, 3278 |
| BsrBI | CCGCTC | 1 cut(s) | 1702 |
| BsrDI | GCAATG | 5 cut(s) | 1248, 2079, 2246, 2337, 3621 |
| BsrI | ACTGG | 4 cut(s) | 48, 1056, 3318, 3349 |
| BssNI | GRCGYC | 4 cut(s) | 66, 195, 306, 375 |
| BssSI | CACGAG | 1 cut(s) | 499 |
| BssT1I | CCWWGG | 2 cut(s) | 300, 2596 |
| Bst2BI | CACGAG | 1 cut(s) | 499 |
| Bst2UI | CCWGG | 8 cut(s) | 1020, 1530, 1680, 2179, 2515, 2788, 3378, 3737 |
| Bst6I | CTCTTC | 6 cut(s) | 102, 2056, 2127, 2936, 3433, 3498 |
| BstACI | GRCGYC | 4 cut(s) | 66, 195, 306, 375 |
| BstAFI | CTTAAG | 2 cut(s) | 2405, 3278 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2585 |
| BstBI | TTCGAA | 2 cut(s) | 830, 3775 |
| BstC8I | GCNNGC | 7 cut(s) | 344, 1076, 1169, 1627, 2077, 2124, 2536 |
| BstDEI | CTNAG | 6 cut(s) | 579, 1917, 2187, 2877, 3490, 3555 |
| BstF5I | GGATG | 5 cut(s) | 198, 757, 849, 2169, 3415 |
| BstFNI | CGCG | 3 cut(s) | 571, 794, 3655 |
| BstH2I | RGCGCY | 2 cut(s) | 69, 378 |
| BstHHI | GCGC | 4 cut(s) | 68, 156, 377, 3657 |
| BstMCI | CGRYCG | 1 cut(s) | 798 |
| BstNI | CCWGG | 8 cut(s) | 1020, 1530, 1680, 2179, 2515, 2788, 3378, 3737 |
| BstNSI | RCATGY | 3 cut(s) | 342, 940, 2126 |
| BstSFI | CTRYAG | 8 cut(s) | 395, 735, 1072, 1746, 2109, 2268, 3388, 3433 |
| BstUI | CGCG | 3 cut(s) | 571, 794, 3655 |
| BstV1I | GCAGC | 6 cut(s) | 409, 775, 2406, 2437, 2735, 3447 |
| BstV2I | GAAGAC | 8 cut(s) | 52, 268, 293, 359, 627, 1857, 2208, 3524 |
| BstX2I | RGATCY | 3 cut(s) | 1492, 1894, 3373 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1989 |
| BstYI | RGATCY | 3 cut(s) | 1492, 1894, 3373 |
| Bsu36I | CCTNAGG | 1 cut(s) | 579 |
| BsuI | GTATCC | 2 cut(s) | 1762, 2602 |
| BsuRI | GGCC | 8 cut(s) | 1191, 1294, 1343, 2177, 2526, 2816, 2845, 2918 |
| BtsCI | GGATG | 5 cut(s) | 198, 757, 849, 2169, 3415 |
| BtsI | GCAGTG | 1 cut(s) | 3854 |
| BtsIMutI | CAGTG | 9 cut(s) | 21, 55, 1049, 1648, 2100, 3356, 3854, 3903, 3977 |
| BveI | ACCTGC | 2 cut(s) | 945, 1957 |
| Cac8I | GCNNGC | 7 cut(s) | 344, 1076, 1169, 1627, 2077, 2124, 2536 |
| CaiI | CAGNNNCTG | 4 cut(s) | 403, 2729, 3152, 3332 |
| CciI | TCATGA | 3 cut(s) | 1236, 2506, 2854 |
| CfoI | GCGC | 4 cut(s) | 68, 156, 377, 3657 |
| Cfr13I | GGNCC | 5 cut(s) | 1190, 1292, 2087, 3316, 3696 |
| Cfr9I | CCCGGG | 1 cut(s) | 3767 |
| CseI | GACGC | 2 cut(s) | 314, 832 |
| DdeI | CTNAG | 6 cut(s) | 579, 1917, 2187, 2877, 3490, 3555 |
| DinI | GGCGCC | 2 cut(s) | 67, 376 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 730 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 730 |
| EaeI | YGGCCR | 2 cut(s) | 2175, 2814 |
| Eam1104I | CTCTTC | 6 cut(s) | 102, 2056, 2127, 2936, 3433, 3498 |
| EarI | CTCTTC | 6 cut(s) | 102, 2056, 2127, 2936, 3433, 3498 |
| EciI | GGCGGA | 2 cut(s) | 29, 235 |
| Ecl136II | GAGCTC | 1 cut(s) | 1016 |
| Eco130I | CCWWGG | 2 cut(s) | 300, 2596 |
| Eco24I | GRGCYC | 2 cut(s) | 1018, 2931 |
| Eco32I | GATATC | 1 cut(s) | 3756 |
| Eco47I | GGWCC | 3 cut(s) | 2087, 3316, 3696 |
| Eco53kI | GAGCTC | 1 cut(s) | 1016 |
| Eco57I | CTGAAG | 5 cut(s) | 503, 1272, 2148, 2644, 2703 |
| Eco81I | CCTNAGG | 1 cut(s) | 579 |
| Eco88I | CYCGRG | 2 cut(s) | 2981, 3767 |
| EcoICRI | GAGCTC | 1 cut(s) | 1016 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3696 |
| EcoRI | GAATTC | 1 cut(s) | 3740 |
| EcoRII | CCWGG | 8 cut(s) | 1018, 1528, 1678, 2177, 2513, 2786, 3376, 3735 |
| EcoRV | GATATC | 1 cut(s) | 3756 |
| EcoT14I | CCWWGG | 2 cut(s) | 300, 2596 |
| EcoT22I | ATGCAT | 3 cut(s) | 546, 1948, 2156 |
| EcoT38I | GRGCYC | 2 cut(s) | 1018, 2931 |
| EgeI | GGCGCC | 2 cut(s) | 67, 376 |
| EheI | GGCGCC | 2 cut(s) | 67, 376 |
| ErhI | CCWWGG | 2 cut(s) | 300, 2596 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2193, 2225, 3473, 3505 |
| FaqI | GGGAC | 6 cut(s) | 524, 835, 1672, 3709, 3750, 3854 |
| FbaI | TGATCA | 3 cut(s) | 783, 1813, 3891 |
| FblI | GTMKAC | 1 cut(s) | 734 |
| FokI | GGATG | 5 cut(s) | 185, 764, 856, 2176, 3422 |
| FriOI | GRGCYC | 2 cut(s) | 1018, 2931 |
| GlaI | GCGC | 4 cut(s) | 67, 155, 376, 3656 |
| GsaI | CCCAGC | 3 cut(s) | 2504, 2534, 2733 |
| GsuI | CTGGAG | 2 cut(s) | 1002, 2395 |
| HaeII | RGCGCY | 2 cut(s) | 69, 378 |
| HaeIII | GGCC | 8 cut(s) | 1191, 1294, 1343, 2177, 2526, 2816, 2845, 2918 |
| HgaI | GACGC | 2 cut(s) | 314, 832 |
| HhaI | GCGC | 4 cut(s) | 68, 156, 377, 3657 |
| Hin1I | GRCGYC | 4 cut(s) | 66, 195, 306, 375 |
| Hin6I | GCGC | 4 cut(s) | 66, 154, 375, 3655 |
| HinP1I | GCGC | 4 cut(s) | 66, 154, 375, 3655 |
| HincII | GTYRAC | 1 cut(s) | 469 |
| HindII | GTYRAC | 1 cut(s) | 469 |
| HindIII | AAGCTT | 1 cut(s) | 833 |
| HphI | GGTGA | 7 cut(s) | 325, 857, 1577, 1942, 2326, 2954, 3854 |
| Hpy99I | CGWCG | 4 cut(s) | 197, 284, 323, 602 |
| HpyCH4IV | ACGT | 3 cut(s) | 195, 624, 1955 |
| HpyF3I | CTNAG | 6 cut(s) | 579, 1917, 2187, 2877, 3490, 3555 |
| HpySE526I | ACGT | 3 cut(s) | 195, 624, 1955 |
| Hsp92I | GRCGYC | 4 cut(s) | 66, 195, 306, 375 |
| HspAI | GCGC | 4 cut(s) | 66, 154, 375, 3655 |
| KasI | GGCGCC | 2 cut(s) | 65, 374 |
| Kpn2I | TCCGGA | 2 cut(s) | 1489, 1650 |
| Ksp22I | TGATCA | 3 cut(s) | 783, 1813, 3891 |
| LguI | GCTCTTC | 2 cut(s) | 2936, 3433 |
| LmnI | GCTCC | 7 cut(s) | 296, 1013, 1021, 1022, 2148, 3985, 3997 |
| Lsp1109I | GCAGC | 6 cut(s) | 409, 775, 2406, 2437, 2735, 3447 |
| LweI | GCATC | 5 cut(s) | 1533, 2437, 2575, 3400, 3594 |
| MaeII | ACGT | 3 cut(s) | 195, 624, 1955 |
| MaeIII | GTNAC | 3 cut(s) | 114, 593, 2565 |
| MbiI | CCGCTC | 1 cut(s) | 1702 |
| MfeI | CAATTG | 2 cut(s) | 2757, 3580 |
| MflI | RGATCY | 3 cut(s) | 1492, 1894, 3373 |
| MhlI | GDGCHC | 3 cut(s) | 1018, 1779, 2931 |
| MlsI | TGGCCA | 2 cut(s) | 2177, 2816 |
| MluNI | TGGCCA | 2 cut(s) | 2177, 2816 |
| Mly113I | GGCGCC | 2 cut(s) | 66, 375 |
| MlyI | GAGTC | 9 cut(s) | 243, 282, 601, 960, 1694, 2366, 2953, 3338, 3772 |
| MmeI | TCCRAC | 3 cut(s) | 348, 3101, 3624 |
| Mox20I | TGGCCA | 2 cut(s) | 2177, 2816 |
| Mph1103I | ATGCAT | 3 cut(s) | 546, 1948, 2156 |
| MroI | TCCGGA | 2 cut(s) | 1489, 1650 |
| MroXI | GAANNNNTTC | 2 cut(s) | 889, 2657 |
| MscI | TGGCCA | 2 cut(s) | 2177, 2816 |
| MseI | TTAA | 9 cut(s) | 1460, 1595, 2406, 2474, 2544, 2795, 3203, 3279, 3701 |
| MslI | CAYNNNNRTG | 4 cut(s) | 600, 2853, 3815, 3899 |
| Msp20I | TGGCCA | 2 cut(s) | 2177, 2816 |
| MspA1I | CMGCKG | 2 cut(s) | 2534, 2729 |
| MspCI | CTTAAG | 2 cut(s) | 2405, 3278 |
| MunI | CAATTG | 2 cut(s) | 2757, 3580 |
| Mva1269I | GAATGC | 5 cut(s) | 826, 1946, 2156, 2396, 3173 |
| MvaI | CCWGG | 8 cut(s) | 1020, 1530, 1680, 2179, 2515, 2788, 3378, 3737 |
| MvnI | CGCG | 3 cut(s) | 571, 794, 3655 |
| NarI | GGCGCC | 2 cut(s) | 66, 375 |
| NciI | CCSGG | 6 cut(s) | 74, 294, 899, 3768, 3769, 3872 |
| NlaIV | GGNNCC | 7 cut(s) | 67, 298, 376, 1494, 2831, 3375, 3697 |
| NmeAIII | GCCGAG | 2 cut(s) | 530, 3475 |
| NmuCI | GTSAC | 3 cut(s) | 114, 593, 2565 |
| NsiI | ATGCAT | 3 cut(s) | 546, 1948, 2156 |
| NspI | RCATGY | 3 cut(s) | 342, 940, 2126 |
| NspV | TTCGAA | 2 cut(s) | 830, 3775 |
| PaeI | GCATGC | 1 cut(s) | 2126 |
| PagI | TCATGA | 3 cut(s) | 1236, 2506, 2854 |
| PciI | ACATGT | 1 cut(s) | 936 |
| PciSI | GCTCTTC | 2 cut(s) | 2936, 3433 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 276 |
| PctI | GAATGC | 5 cut(s) | 826, 1946, 2156, 2396, 3173 |
| PdmI | GAANNNNTTC | 2 cut(s) | 889, 2657 |
| PflFI | GACNNNGTC | 1 cut(s) | 212 |
| PfoI | TCCNGGA | 2 cut(s) | 1018, 3870 |
| Ple19I | CGATCG | 1 cut(s) | 798 |
| PleI | GAGTC | 9 cut(s) | 242, 281, 600, 960, 1693, 2365, 2953, 3337, 3771 |
| PluTI | GGCGCC | 2 cut(s) | 69, 378 |
| PpsI | GAGTC | 9 cut(s) | 242, 281, 600, 960, 1693, 2365, 2953, 3337, 3771 |
| PpuMI | RGGWCCY | 1 cut(s) | 3696 |
| PscI | ACATGT | 1 cut(s) | 936 |
| PshBI | ATTAAT | 1 cut(s) | 2544 |
| PsiI | TTATAA | 2 cut(s) | 1064, 1428 |
| Psp124BI | GAGCTC | 1 cut(s) | 1018 |
| Psp5II | RGGWCCY | 1 cut(s) | 3696 |
| Psp6I | CCWGG | 8 cut(s) | 1018, 1528, 1678, 2177, 2513, 2786, 3376, 3735 |
| PspFI | CCCAGC | 3 cut(s) | 2500, 2530, 2729 |
| PspGI | CCWGG | 8 cut(s) | 1018, 1528, 1678, 2177, 2513, 2786, 3376, 3735 |
| PspN4I | GGNNCC | 7 cut(s) | 67, 298, 376, 1494, 2831, 3375, 3697 |
| PspPI | GGNCC | 5 cut(s) | 1190, 1292, 2087, 3316, 3696 |
| PspPPI | RGGWCCY | 1 cut(s) | 3696 |
| PstI | CTGCAG | 5 cut(s) | 399, 1076, 2113, 2272, 3437 |
| PstNI | CAGNNNCTG | 4 cut(s) | 403, 2729, 3152, 3332 |
| PsuI | RGATCY | 3 cut(s) | 1492, 1894, 3373 |
| PsyI | GACNNNGTC | 1 cut(s) | 212 |
| PvuI | CGATCG | 1 cut(s) | 798 |
| PvuII | CAGCTG | 1 cut(s) | 2534 |
| RseI | CAYNNNNRTG | 4 cut(s) | 600, 2853, 3815, 3899 |
| SacI | GAGCTC | 1 cut(s) | 1018 |
| SapI | GCTCTTC | 2 cut(s) | 2936, 3433 |
| SaqAI | TTAA | 9 cut(s) | 1460, 1595, 2406, 2474, 2544, 2795, 3203, 3279, 3701 |
| Sau96I | GGNCC | 5 cut(s) | 1190, 1292, 2087, 3316, 3696 |
| ScaI | AGTACT | 2 cut(s) | 1457, 3650 |
| SchI | GAGTC | 9 cut(s) | 243, 282, 601, 960, 1694, 2366, 2953, 3338, 3772 |
| SduI | GDGCHC | 3 cut(s) | 1018, 1779, 2931 |
| SfaNI | GCATC | 5 cut(s) | 1533, 2437, 2575, 3400, 3594 |
| SfcI | CTRYAG | 8 cut(s) | 395, 735, 1072, 1746, 2109, 2268, 3388, 3433 |
| SfoI | GGCGCC | 2 cut(s) | 67, 376 |
| SfuI | TTCGAA | 2 cut(s) | 830, 3775 |
| SinI | GGWCC | 3 cut(s) | 2087, 3316, 3696 |
| SmaI | CCCGGG | 1 cut(s) | 3769 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 600, 2853, 3815, 3899 |
| SmlI | CTYRAG | 8 cut(s) | 110, 263, 347, 1661, 2405, 2624, 2954, 3278 |
| SmoI | CTYRAG | 8 cut(s) | 110, 263, 347, 1661, 2405, 2624, 2954, 3278 |
| SpeI | ACTAGT | 1 cut(s) | 3865 |
| SphI | GCATGC | 1 cut(s) | 2126 |
| SspDI | GGCGCC | 2 cut(s) | 65, 374 |
| SspI | AATATT | 1 cut(s) | 1407 |
| SstI | GAGCTC | 1 cut(s) | 1018 |
| StyI | CCWWGG | 2 cut(s) | 300, 2596 |
| TaiI | ACGT | 3 cut(s) | 198, 627, 1958 |
| TatI | WGTACW | 3 cut(s) | 1455, 2750, 3648 |
| TauI | GCSGC | 6 cut(s) | 45, 224, 227, 2102, 2529, 2729 |
| Tru1I | TTAA | 9 cut(s) | 1460, 1595, 2406, 2474, 2544, 2795, 3203, 3279, 3701 |
| Tru9I | TTAA | 9 cut(s) | 1460, 1595, 2406, 2474, 2544, 2795, 3203, 3279, 3701 |
| TscAI | CASTG | 9 cut(s) | 28, 55, 1056, 1648, 2100, 3356, 3861, 3903, 3977 |
| TseFI | GTSAC | 3 cut(s) | 114, 593, 2565 |
| TseI | GCWGC | 6 cut(s) | 397, 763, 2419, 2450, 2723, 3435 |
| Tsp45I | GTSAC | 3 cut(s) | 114, 593, 2565 |
| TspGWI | ACGGA | 2 cut(s) | 1661, 3244 |
| TspMI | CCCGGG | 1 cut(s) | 3767 |
| TspRI | CASTG | 9 cut(s) | 28, 55, 1056, 1648, 2100, 3356, 3861, 3903, 3977 |
| Tth111I | GACNNNGTC | 1 cut(s) | 212 |
| Vha464I | CTTAAG | 2 cut(s) | 2405, 3278 |
| VpaK11BI | GGWCC | 3 cut(s) | 2087, 3316, 3696 |
| VspI | ATTAAT | 1 cut(s) | 2544 |
| XapI | RAATTY | 7 cut(s) | 1726, 2042, 2237, 2441, 2609, 3448, 3740 |
| XbaI | TCTAGA | 2 cut(s) | 1534, 3037 |
| XceI | RCATGY | 3 cut(s) | 342, 940, 2126 |
| XmaI | CCCGGG | 1 cut(s) | 3767 |
| XmiI | GTMKAC | 1 cut(s) | 734 |
| XmnI | GAANNNNTTC | 2 cut(s) | 889, 2657 |
| ZraI | GACGTC | 1 cut(s) | 196 |
| ZrmI | AGTACT | 2 cut(s) | 1457, 3650 |
| Zsp2I | ATGCAT | 3 cut(s) | 546, 1948, 2156 |