Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0010443

Physical Location & Seq

Genomic Coordinates Forward (+)

11806604 .. 11810285

Gene Structure 3682 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g16840.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3243 bp

ATGGAGAAAGATCCGATCGGTGATGAAAAAGGCAAATCGAGCCGGAACAAGCAAACAAAGCTCAAGAGGAAAGAGCTGGGATTGTCGAGCATGCTAAACACCGAAGTTGATGCCGTCCTCGCCGTCGTCTGCCGTCCCCTGGACCCAACCTCCCACTGCTTCGCCCCCCCGGAGGACATCATCGACCCTTCCTTTCTCCAATCTCTAAAATCCTTCCGCGCCCTAATCCTCAACCCCCAGCAGGAATGGCGCACAATAGAGCCCTCCATCTACCTCTCCCCCTTCCTAGATGTCATCCAAAGCGACCACGTCCACGCCTCCGCCACCCGCATCGCCCTCTCCGCCACGCTGAAGATTCTCAAGCTCGGAGTCTTCGACGAGAAGACTCCGGGGGCGAAAGAAGCTATTAACACCGTGGTCACCTCCATCTCCACGTGCTGGCTTGAAAGAACTGACTCTGTTAACGAGGACGCCGTGATGATGAACATCCTCCAAATCCTGACCGGAACCATGAACCACCGTGGTGTTCAGCAATCGGCGAACAGAGGAGACTTGCTCATGCGAAGTGCGAGGTACACAATGCACGAGCTGATCCAGATCAAATTTTCGCGGTTGCCAGAAATCGATTTCCAAGATGAGGACGGCTCGGCGAGTACTGACACCGTAGACGCCGATGCGGACGATGGGAATTTGGATTCAGGGTGGTTGAGACGGATCAGGGGTGAGGATGTGCAGCTTTTCGCTCTTGTTCTGATCAACTCCGCGATCGAGTTGAGCGGGGATGAAATCGGGTCTCATTCGAAGTTGTTGAGGATGATGAAAGATGATCTCTTTCACCATTTGGTTCACTCCGGCACGAGTTCAAGCCCGCTTGTTTTTTCCATGATTTGCAGTACGGTTTTGAACATGTATCACTTTCTTCAGAGATTCATTCGGCTTCAATTAGAAGCATTCTTCACGTTTGTGCTGTTTCGAGTTTCAGCTCCCAGAGTACAACTGACGTTCGTCGTAGAGGTCTATGTGAACTACGACTGTGATCCGCTTTGCCATAATGCGTTTGAGGAGATTGGGATGTTGCTTTGCAAGCAGTCTTTTCTGGTCGCAAGCCCTTTGAAAACTTTACAGATACAAGCCTTTGAATGGTTAGTTATCATGATCCACAACATTGCAGATAGTATTGATAGAGAAAATGATACAAGCCCTTCCGGAACCTACCCGATTGAGATCACAGAGTATACGCTGTTTTGGGAAGACAAACAGAGAGATGATTCAGAAGTTTGGGTGCAATTTGTAAGGCTGAAGAAAGCGCAGAAGAGAAAAGCATTGATTGCTGGACACCATTTTAATCGCGAGAAGGGAATGGAATACTTGAAGCTTTCCAACTTAGTCTCTGACCCTCCGGATCCAAAGACTTCGGCTTATTTCTTTCGTTACACCCCTGGGCTTGACAAGATGATGATAGACGATTATCTTGGTGATCCCGACGAGTTTCACATCAAAGTACTTAAAGAATTCACCGGAGCCTTTGGATTTTCAGGCATGAATCTCGACAGTGCTCTCCGAACTTATCTGGAGACTTTCCGTTTGCCAGGAGAGTCCCAGAAGATTCAGAGGATTCTCGAAGCGTTTTCAGAGAGTTTTTTTGAGCAGCAGTCTGCAGATCTTTTCGTGAACAAAGACACTGTATTCATTCTTTGCTACTCTCTCATTATGCTCAATACTGATCAGCACAATCCGCAAGTGAAGAAGAAGATGACGGAAGAAGAGTTCATCAGGAATAATAGGGCAATCAATCGAGGGATCGATCTTCCTAGAGACTATCTGTGCGAGCTTTTCCAATCCATATCGAACAATGCAATCACACTTTTTGGTCAATCTGGTATGACAGTACTAATGAACCCGAGCAGATGGATTGAGTTGATGAACCGTTCCAAAACTGTGCAGCCTTTCATTCTATGTGATTTTGATTGTCGGCTAGGCAGAGACATGTTTGCTTGCATTGCTGGCCCTTCAGTCACAGCTATTTCTGCATTTTTCGAGCAAGCTGAAGAAGAGGAGTTGCTCCATGAATGCATTGAAGGATTATTCTTGGTAGCCAGGATAGTGCAGTACCGACTGGAGGACACACTCGATGAGCTCATTGCCACCTTCTCGAGATTCACCACGCTGCTTAATCCTTACGCCTCTGCGGAAGAAACACTCTTTGTTTTTAACAAAGATTTGATGCCAAGAATGGCTACACTAGCTATTTTCACCATCGCAAACAACTTTGGAGAGTCGATCAGAGGGGGTTGGAGGAACATTGTGGACTGTTTGCTAAAACGCAAGAGGCTTAACCTACTTCCCCAAAATGTCCTTGAGTTTGATGCTGCTTCCACCTCATCTGATGGAGTTGAGACTCTGATAATGATGATGTCTGATGAAACCCATGTATTGCAGACAAATTACGCTTACTGCATCGACTGTGCCCTTGGTTTTATTGCTCTAAAAAACAGCCCGTCGGAGAAGAACTTGAAGATACTTGACCTGTTAGCAGATTCTGTAAACTTGTTGATCCAATGGTACAGAAATCAGTTCTCAGATCCTGGGAACAATTACAGCATCGCAAGCAACACGAGTAACTCCTCCTTAGAAGACTCAAAAGGTTTCGGCTCTAACAACTTTGCCGTGAATTTGTTTGTCAAGCTAGGGGAGGCATTTCAAAAGATCAGCCTAGCTCGGCGAGAAGAAATAAGAAACCATGCAGTCTTGTCAGTTCAAAAAAGTTTCAAACTTTCTGAGGAACTAGAATTCACACCAACCAACTGTACCAACTGTTTGAACCTCGTTATCTTTGCGATGGTGGATGATCTGCACGAAAAGATGCTGGAGTACTTGCAAAGAGAGAACGCAGAGACGGAGATGAGAGGCATGGAAGGGACCTTGAAGACTGCATTGGAGCTCCTAACAGACGTGTACTTGCAGTTTCTGATACCGATTTCCCAATGCAGCAGCTTTCGGACATTTTGGTTGGGAGTGTTGAGAAGGATGGACACATGTATGAAGGCGGATTTGGGAGCATATGGCGAATCAAAACTGCCGGAAATTGTGCCGGAGTTGTTGAGAAAGATGATTACGGAGATGAAGGCGAAGGAGATATTAGTGCATAAGGAGGGTGATGATCTTTGGGAGATAACACGTATTCAGATACAATGGATTGCTCCTTCAATCAAGGAGGAGCTGTTTCCAGAAGAAAGTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0008150 GO:0009846 GO:0009856 GO:0012505 GO:0016020 GO:0016192 GO:0019899 GO:0022414 GO:0031984 GO:0032501 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0051020 GO:0051179 GO:0051234 GO:0051704 GO:0065007 GO:0065009 GO:0090406 GO:0098772 GO:0098791 GO:0120025

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

DCB Sec7 Sec7_N

Protein Analysis

1081

Amino Acids

123.12

Weight (kDa)

5.08

Isoelectric Point (pI)

47.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19610
fragaria_vesca	FvH4_1g05140
malus_domestica	MD02G1050300.v1.1 MD15G1187600.v1.1
prunus_persica	Prupe.7G228800_v2.0.a1
pyrus_communis	pycom02g04190 pycom02g04200 pycom15g16840
rosa_chinensis	RchiOBHm_Chr2g0090771 RchiOBHm_Chr2g0090781
rosa_laevigata	RLG00000016142
rosa_multiflora	Rmu_co8351113.1_g000001 Rmu_ssc0000367.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150830
rosa_rugosa	Rorug02G0010400
rosa_samantha	Rh2AG056400 Rh2BG055100 Rh2CG057500 Rh2DG056000 Rh2DG056100
rosa_wichuraiana	Rw2G004610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	438
AccBSI	CCGCTC	1 cut(s)	777
AccI	GTMKAC	2 cut(s)	666, 1235
AccII	CGCG	4 cut(s)	219, 610, 764, 1350
AccIII	TCCGGA	2 cut(s)	1205, 1399
AcsI	RAATTY	5 cut(s)	602, 688, 1511, 2671, 2789
AcuI	CTGAAG	5 cut(s)	371, 905, 1319, 1995, 2067
AcvI	CACGTG	1 cut(s)	435
AcyI	GRCGYC	2 cut(s)	471, 669
AfiI	CCNNNNNNNGG	7 cut(s)	139, 172, 241, 438, 637, 1140, 2119
AflIII	ACRYGT	5 cut(s)	906, 1986, 2952, 3035, 3176
AjiI	CACGTC	2 cut(s)	310, 2953
AjnI	CCWGG	5 cut(s)	138, 1438, 1588, 2096, 2584
AjuI	GAANNNNNNNTTGG	4 cut(s)	2918, 2950, 3035, 3067
AleI	CACNNNNGTG	2 cut(s)	522, 962
AloI	GAACNNNNNNTCC	2 cut(s)	1751, 1783
Alw21I	GWGCWC	3 cut(s)	1558, 2139, 2943
Alw26I	GTCTC	9 cut(s)	543, 703, 798, 1393, 1568, 1809, 1977, 2390, 2888
AlwNI	CAGNNNCTG	3 cut(s)	2540, 2585, 2968
Ama87I	CYCGRG	2 cut(s)	1900, 2152
Aor13HI	TCCGGA	2 cut(s)	1205, 1399
AoxI	GGCC	1 cut(s)	2005
ApeKI	GCWGC	7 cut(s)	733, 1648, 1942, 2167, 2369, 2988, 2991
ApoI	RAATTY	5 cut(s)	602, 688, 1511, 2671, 2789
ArsI	GACNNNNNNTTYG	2 cut(s)	1567, 1599
AspLEI	GCGC	3 cut(s)	221, 252, 1309
AspS9I	GGNCC	3 cut(s)	142, 2006, 2919
AsuC2I	CCSGG	2 cut(s)	170, 390
AsuHPI	GGTGA	9 cut(s)	32, 412, 734, 827, 1487, 1507, 2152, 2245, 3167
AsuII	TTCGAA	1 cut(s)	800
AvaI	CYCGRG	2 cut(s)	1900, 2152
AvaII	GGWCC	2 cut(s)	142, 2919
BaeGI	GKGCMC	1 cut(s)	2470
BamHI	GGATCC	1 cut(s)	1402
BanII	GRGCYC	3 cut(s)	264, 2139, 2943
BauI	CACGAG	3 cut(s)	584, 856, 2614
BbrPI	CACGTG	1 cut(s)	435
BbsI	GAAGAC	5 cut(s)	364, 389, 1257, 2640, 2933
Bbv12I	GWGCWC	3 cut(s)	1558, 2139, 2943
BbvI	GCAGC	7 cut(s)	745, 1660, 1954, 2154, 2356, 3000, 3003
BccI	CCATC	8 cut(s)	275, 434, 677, 1902, 2264, 2381, 2833, 3022
BceAI	ACGGC	6 cut(s)	98, 107, 117, 458, 658, 2651
BcgI	CGANNNNNNTGC	4 cut(s)	92, 126, 1528, 1562
BciT130I	CCWGG	5 cut(s)	140, 1440, 1590, 2098, 2586
BclI	TGATCA	2 cut(s)	753, 1723
BcnI	CCSGG	2 cut(s)	170, 390
BcoDI	GTCTC	9 cut(s)	543, 703, 798, 1393, 1568, 1809, 1977, 2390, 2888
BfaI	CTAG	7 cut(s)	287, 1812, 1976, 2243, 2687, 2714, 2786
BfmI	CTRYAG	1 cut(s)	1656
BglII	AGATCT	1 cut(s)	1660
BisI	GCNGC	7 cut(s)	734, 1649, 1943, 2168, 2370, 2989, 2992
BlsI	GCNGC	7 cut(s)	735, 1650, 1944, 2169, 2371, 2990, 2993
BmcAI	AGTACT	4 cut(s)	655, 1503, 1890, 2873
Bme1390I	CCNGG	7 cut(s)	140, 170, 390, 1440, 1590, 2098, 2586
Bme18I	GGWCC	2 cut(s)	142, 2919
BmeT110I	CYCGRG	2 cut(s)	1900, 2152
BmgBI	CACGTC	2 cut(s)	310, 2953
BmgT120I	GGNCC	3 cut(s)	142, 2006, 2919
BmiI	GGNNCC	6 cut(s)	144, 508, 1210, 1404, 1522, 2920
BmrFI	CCNGG	7 cut(s)	140, 170, 390, 1440, 1590, 2098, 2586
BmsI	GCATC	8 cut(s)	100, 339, 664, 2214, 2356, 2466, 2610, 2853
BoxI	GACNNNNGTC	1 cut(s)	1004
BpiI	GAAGAC	5 cut(s)	364, 389, 1257, 2640, 2933
BplI	GAGNNNNNCTC	4 cut(s)	540, 572, 629, 661
BpmI	CTGGAG	3 cut(s)	1592, 2138, 2888
Bpu14I	TTCGAA	1 cut(s)	800
BpuEI	CTTGAG	3 cut(s)	47, 344, 2378
BpuMI	CCSGG	2 cut(s)	170, 390
Bsa29I	ATCGAT	2 cut(s)	624, 1803
BsaAI	YACGTR	2 cut(s)	435, 3179
BsaBI	GATNNNNATC	3 cut(s)	485, 596, 1223
BsaHI	GRCGYC	2 cut(s)	471, 669
BsaI	GGTCTC	1 cut(s)	798
BsaJI	CCNNGG	9 cut(s)	138, 168, 389, 414, 520, 1438, 1439, 2470, 2585
BsaWI	WCCGGW	4 cut(s)	503, 1205, 1399, 1517
BsaXI	ACNNNNNCTCC	4 cut(s)	134, 164, 3206, 3236
Bsc4I	CCNNNNNNNGG	7 cut(s)	139, 172, 241, 438, 637, 1140, 2119
Bse1I	ACTGG	1 cut(s)	2121
Bse3DI	GCAATG	3 cut(s)	1164, 1998, 2139
Bse8I	GATNNNNATC	3 cut(s)	485, 596, 1223
BseAI	TCCGGA	2 cut(s)	1205, 1399
BseBI	CCWGG	5 cut(s)	140, 1440, 1590, 2098, 2586
BseCI	ATCGAT	2 cut(s)	624, 1803
BseDI	CCNNGG	9 cut(s)	138, 168, 389, 414, 520, 1438, 1439, 2470, 2585
BseGI	GGATG	8 cut(s)	294, 486, 733, 787, 819, 1077, 2851, 3033
BseJI	GATNNNNATC	3 cut(s)	485, 596, 1223
BseLI	CCNNNNNNNGG	7 cut(s)	139, 172, 241, 438, 637, 1140, 2119
BseMI	GCAATG	3 cut(s)	1164, 1998, 2139
BseMII	CTCAG	2 cut(s)	2592, 2769
BseNI	ACTGG	1 cut(s)	2121
BseRI	GAGGAG	5 cut(s)	561, 1076, 2069, 2614, 3230
BseSI	GKGCMC	1 cut(s)	2470
BseXI	GCAGC	7 cut(s)	745, 1660, 1954, 2154, 2356, 3000, 3003
BseYI	CCCAGC	2 cut(s)	76, 237
BsgI	GTGCAG	4 cut(s)	752, 1961, 2126, 2837
Bsh1236I	CGCG	4 cut(s)	219, 610, 764, 1350
Bsh1285I	CGRYCG	2 cut(s)	18, 768
BshFI	GGCC	1 cut(s)	2007
BshVI	ATCGAT	2 cut(s)	624, 1803
BsiEI	CGRYCG	2 cut(s)	18, 768
BsiHKAI	GWGCWC	3 cut(s)	1558, 2139, 2943
BsiHKCI	CYCGRG	2 cut(s)	1900, 2152
BslFI	GGGAC	3 cut(s)	120, 1582, 2932
BslI	CCNNNNNNNGG	7 cut(s)	139, 172, 241, 438, 637, 1140, 2119
BsmAI	GTCTC	9 cut(s)	543, 703, 798, 1393, 1568, 1809, 1977, 2390, 2888
BsmBI	CGTCTC	2 cut(s)	703, 2888
BsmFI	GGGAC	3 cut(s)	120, 1582, 2932
BsmI	GAATGC	2 cut(s)	950, 2075
BsnI	GGCC	1 cut(s)	2007
Bso31I	GGTCTC	1 cut(s)	798
BsoBI	CYCGRG	2 cut(s)	1900, 2152
Bsp119I	TTCGAA	1 cut(s)	800
Bsp1286I	GDGCHC	5 cut(s)	264, 1558, 2139, 2470, 2943
Bsp13I	TCCGGA	2 cut(s)	1205, 1399
Bsp68I	TCGCGA	1 cut(s)	1350
BspANI	GGCC	1 cut(s)	2007
BspCNI	CTCAG	2 cut(s)	2591, 2770
BspDI	ATCGAT	2 cut(s)	624, 1803
BspEI	TCCGGA	2 cut(s)	1205, 1399
BspFNI	CGCG	4 cut(s)	219, 610, 764, 1350
BspHI	TCATGA	1 cut(s)	1152
BspLI	GGNNCC	6 cut(s)	144, 508, 1210, 1404, 1522, 2920
BspMAI	CTGCAG	1 cut(s)	1660
BspT104I	TTCGAA	1 cut(s)	800
BspTNI	GGTCTC	1 cut(s)	798
BsrBI	CCGCTC	1 cut(s)	777
BsrDI	GCAATG	3 cut(s)	1164, 1998, 2139
BsrI	ACTGG	1 cut(s)	2121
BssECI	CCNNGG	9 cut(s)	138, 168, 389, 414, 520, 1438, 1439, 2470, 2585
BssNAI	GTATAC	1 cut(s)	1236
BssNI	GRCGYC	2 cut(s)	471, 669
BssSI	CACGAG	3 cut(s)	584, 856, 2614
BssT1I	CCWWGG	1 cut(s)	2470
Bst1107I	GTATAC	1 cut(s)	1236
Bst2BI	CACGAG	3 cut(s)	584, 856, 2614
Bst2UI	CCWGG	5 cut(s)	140, 1440, 1590, 2098, 2586
Bst6I	CTCTTC	3 cut(s)	1307, 1758, 2046
BstACI	GRCGYC	2 cut(s)	471, 669
BstAPI	GCANNNNNTGC	1 cut(s)	1328
BstBAI	YACGTR	2 cut(s)	435, 3179
BstBI	TTCGAA	1 cut(s)	800
BstDEI	CTNAG	4 cut(s)	1384, 2578, 2629, 2778
BstDSI	CCRYGG	2 cut(s)	414, 520
BstEII	GGTNACC	1 cut(s)	418
BstF5I	GGATG	8 cut(s)	294, 486, 733, 787, 819, 1077, 2851, 3033
BstFNI	CGCG	4 cut(s)	219, 610, 764, 1350
BstHHI	GCGC	3 cut(s)	221, 252, 1309
BstMAI	GTCTC	9 cut(s)	543, 703, 798, 1393, 1568, 1809, 1977, 2390, 2888
BstMCI	CGRYCG	2 cut(s)	18, 768
BstNI	CCWGG	5 cut(s)	140, 1440, 1590, 2098, 2586
BstNSI	RCATGY	4 cut(s)	94, 910, 1990, 3039
BstPAI	GACNNNNGTC	1 cut(s)	1004
BstPI	GGTNACC	1 cut(s)	418
BstSCI	CCNGG	7 cut(s)	138, 168, 388, 1438, 1588, 2096, 2584
BstSFI	CTRYAG	1 cut(s)	1656
BstSLI	GKGCMC	1 cut(s)	2470
BstUI	CGCG	4 cut(s)	219, 610, 764, 1350
BstV1I	GCAGC	7 cut(s)	745, 1660, 1954, 2154, 2356, 3000, 3003
BstV2I	GAAGAC	5 cut(s)	364, 389, 1257, 2640, 2933
BstX2I	RGATCY	4 cut(s)	10, 1402, 1660, 2581
BstYI	RGATCY	4 cut(s)	10, 1402, 1660, 2581
BstZ17I	GTATAC	1 cut(s)	1236
Bsu15I	ATCGAT	2 cut(s)	624, 1803
BsuRI	GGCC	1 cut(s)	2007
BsuTUI	ATCGAT	2 cut(s)	624, 1803
BtgI	CCRYGG	2 cut(s)	414, 520
BtgZI	GCGATG	4 cut(s)	316, 2242, 2587, 2852
BtrI	CACGTC	2 cut(s)	310, 2953
BtsCI	GGATG	8 cut(s)	294, 486, 733, 787, 819, 1077, 2851, 3033
BtsI	GCAGTG	1 cut(s)	154
BtsIMutI	CAGTG	3 cut(s)	154, 1558, 1680
BtuMI	TCGCGA	1 cut(s)	1350
CaiI	CAGNNNCTG	3 cut(s)	2540, 2585, 2968
CciI	TCATGA	1 cut(s)	1152
CfoI	GCGC	3 cut(s)	221, 252, 1309
Cfr13I	GGNCC	3 cut(s)	142, 2006, 2919
ClaI	ATCGAT	2 cut(s)	624, 1803
CseI	GACGC	2 cut(s)	479, 677
DdeI	CTNAG	4 cut(s)	1384, 2578, 2629, 2778
Eam1104I	CTCTTC	3 cut(s)	1307, 1758, 2046
EarI	CTCTTC	3 cut(s)	1307, 1758, 2046
EciI	GGCGGA	3 cut(s)	310, 331, 3062
Ecl136II	GAGCTC	2 cut(s)	2137, 2941
Eco130I	CCWWGG	1 cut(s)	2470
Eco24I	GRGCYC	3 cut(s)	264, 2139, 2943
Eco31I	GGTCTC	1 cut(s)	798
Eco47I	GGWCC	2 cut(s)	142, 2919
Eco53kI	GAGCTC	2 cut(s)	2137, 2941
Eco57I	CTGAAG	5 cut(s)	371, 905, 1319, 1995, 2067
Eco72I	CACGTG	1 cut(s)	435
Eco88I	CYCGRG	2 cut(s)	1900, 2152
Eco91I	GGTNACC	1 cut(s)	418
EcoICRI	GAGCTC	2 cut(s)	2137, 2941
EcoO109I	RGGNCCY	1 cut(s)	2919
EcoO65I	GGTNACC	1 cut(s)	418
EcoRI	GAATTC	2 cut(s)	1511, 2789
EcoRII	CCWGG	5 cut(s)	138, 1438, 1588, 2096, 2584
EcoT14I	CCWWGG	1 cut(s)	2470
EcoT22I	ATGCAT	1 cut(s)	2075
EcoT38I	GRGCYC	3 cut(s)	264, 2139, 2943
ErhI	CCWWGG	1 cut(s)	2470
Esp3I	CGTCTC	2 cut(s)	703, 2888
FaqI	GGGAC	3 cut(s)	120, 1582, 2932
FauI	CCCGC	3 cut(s)	335, 770, 876
FauNDI	CATATG	1 cut(s)	3061
FbaI	TGATCA	2 cut(s)	753, 1723
FblI	GTMKAC	2 cut(s)	666, 1235
Fnu4HI	GCNGC	7 cut(s)	734, 1649, 1943, 2168, 2370, 2989, 2992
FokI	GGATG	8 cut(s)	281, 473, 740, 794, 826, 1084, 2858, 3040
FriOI	GRGCYC	3 cut(s)	264, 2139, 2943
Fsp4HI	GCNGC	7 cut(s)	734, 1649, 1943, 2168, 2370, 2989, 2992
FspBI	CTAG	7 cut(s)	287, 1812, 1976, 2243, 2687, 2714, 2786
GlaI	GCGC	3 cut(s)	220, 251, 1308
GluI	GCNGC	7 cut(s)	734, 1649, 1943, 2168, 2370, 2989, 2992
GsaI	CCCAGC	2 cut(s)	80, 241
GsuI	CTGGAG	3 cut(s)	1592, 2138, 2888
HaeIII	GGCC	1 cut(s)	2007
HgaI	GACGC	2 cut(s)	479, 677
HhaI	GCGC	3 cut(s)	221, 252, 1309
Hin1I	GRCGYC	2 cut(s)	471, 669
Hin6I	GCGC	3 cut(s)	219, 250, 1307
HinP1I	GCGC	3 cut(s)	219, 250, 1307
HincII	GTYRAC	1 cut(s)	463
HindII	GTYRAC	1 cut(s)	463
HindIII	AAGCTT	1 cut(s)	1373
HpaI	GTTAAC	1 cut(s)	463
HphI	GGTGA	9 cut(s)	32, 412, 734, 827, 1487, 1507, 2152, 2245, 3167
Hpy99I	CGWCG	5 cut(s)	128, 380, 1010, 1487, 2503
HpyCH4IV	ACGT	6 cut(s)	309, 434, 959, 1001, 2952, 3178
HpyF3I	CTNAG	4 cut(s)	1384, 2578, 2629, 2778
HpySE526I	ACGT	6 cut(s)	309, 434, 959, 1001, 2952, 3178
Hsp92I	GRCGYC	2 cut(s)	471, 669
HspAI	GCGC	3 cut(s)	219, 250, 1307
Kpn2I	TCCGGA	2 cut(s)	1205, 1399
Ksp22I	TGATCA	2 cut(s)	753, 1723
KspAI	GTTAAC	1 cut(s)	463
LmnI	GCTCC	8 cut(s)	988, 1520, 2067, 2938, 2946, 3056, 3205, 3217
Lsp1109I	GCAGC	7 cut(s)	745, 1660, 1954, 2154, 2356, 3000, 3003
LweI	GCATC	8 cut(s)	100, 339, 664, 2214, 2356, 2466, 2610, 2853
MaeI	CTAG	7 cut(s)	287, 1812, 1976, 2243, 2687, 2714, 2786
MaeII	ACGT	6 cut(s)	309, 434, 959, 1001, 2952, 3178
MaeIII	GTNAC	4 cut(s)	418, 1430, 2014, 2618
MbiI	CCGCTC	1 cut(s)	777
MflI	RGATCY	4 cut(s)	10, 1402, 1660, 2581
MhlI	GDGCHC	5 cut(s)	264, 1558, 2139, 2470, 2943
MlyI	GAGTC	7 cut(s)	378, 379, 449, 1604, 2285, 2392, 2630
MmeI	TCCRAC	3 cut(s)	1404, 2273, 2481
Mph1103I	ATGCAT	1 cut(s)	2075
MroI	TCCGGA	2 cut(s)	1205, 1399
MseI	TTAA	7 cut(s)	408, 462, 1344, 1506, 2172, 2211, 2334
MslI	CAYNNNNRTG	3 cut(s)	522, 962, 3038
MspR9I	CCNGG	7 cut(s)	140, 170, 390, 1440, 1590, 2098, 2586
Mva1269I	GAATGC	2 cut(s)	950, 2075
MvaI	CCWGG	5 cut(s)	140, 1440, 1590, 2098, 2586
MvnI	CGCG	4 cut(s)	219, 610, 764, 1350
NciI	CCSGG	2 cut(s)	170, 390
NdeI	CATATG	1 cut(s)	3061
NlaIV	GGNNCC	6 cut(s)	144, 508, 1210, 1404, 1522, 2920
NmeAIII	GCCGAG	2 cut(s)	626, 2698
NmuCI	GTSAC	2 cut(s)	418, 2014
NruI	TCGCGA	1 cut(s)	1350
NsiI	ATGCAT	1 cut(s)	2075
NspI	RCATGY	4 cut(s)	94, 910, 1990, 3039
NspV	TTCGAA	1 cut(s)	800
OliI	CACNNNNGTG	2 cut(s)	522, 962
PaeI	GCATGC	1 cut(s)	94
PaeR7I	CTCGAG	1 cut(s)	2152
PagI	TCATGA	1 cut(s)	1152
PasI	CCCWGGG	1 cut(s)	1439
PciI	ACATGT	3 cut(s)	906, 1986, 3035
PcsI	WCGNNNNNNNCGW	2 cut(s)	372, 471
PctI	GAATGC	2 cut(s)	950, 2075
PflFI	GACNNNGTC	1 cut(s)	308
PflMI	CCANNNNNTGG	1 cut(s)	438
PkrI	GCNGC	7 cut(s)	735, 1650, 1944, 2169, 2371, 2990, 2993
Ple19I	CGATCG	2 cut(s)	18, 768
PleI	GAGTC	7 cut(s)	377, 379, 449, 1603, 2284, 2392, 2630
PmaCI	CACGTG	1 cut(s)	435
PmlI	CACGTG	1 cut(s)	435
PpsI	GAGTC	7 cut(s)	377, 379, 449, 1603, 2284, 2392, 2630
Ppu21I	YACGTR	2 cut(s)	435, 3179
PpuMI	RGGWCCY	1 cut(s)	2919
PscI	ACATGT	3 cut(s)	906, 1986, 3035
PshAI	GACNNNNGTC	1 cut(s)	1004
Psp124BI	GAGCTC	2 cut(s)	2139, 2943
Psp5II	RGGWCCY	1 cut(s)	2919
Psp6I	CCWGG	5 cut(s)	138, 1438, 1588, 2096, 2584
PspCI	CACGTG	1 cut(s)	435
PspEI	GGTNACC	1 cut(s)	418
PspFI	CCCAGC	2 cut(s)	76, 237
PspGI	CCWGG	5 cut(s)	138, 1438, 1588, 2096, 2584
PspN4I	GGNNCC	6 cut(s)	144, 508, 1210, 1404, 1522, 2920
PspPI	GGNCC	3 cut(s)	142, 2006, 2919
PspPPI	RGGWCCY	1 cut(s)	2919
PstI	CTGCAG	1 cut(s)	1660
PstNI	CAGNNNCTG	3 cut(s)	2540, 2585, 2968
PsuI	RGATCY	4 cut(s)	10, 1402, 1660, 2581
PsyI	GACNNNGTC	1 cut(s)	308
PvuI	CGATCG	2 cut(s)	18, 768
RruI	TCGCGA	1 cut(s)	1350
RseI	CAYNNNNRTG	3 cut(s)	522, 962, 3038
SacI	GAGCTC	2 cut(s)	2139, 2943
SaqAI	TTAA	7 cut(s)	408, 462, 1344, 1506, 2172, 2211, 2334
SatI	GCNGC	7 cut(s)	734, 1649, 1943, 2168, 2370, 2989, 2992
Sau96I	GGNCC	3 cut(s)	142, 2006, 2919
ScaI	AGTACT	4 cut(s)	655, 1503, 1890, 2873
SchI	GAGTC	7 cut(s)	378, 379, 449, 1604, 2285, 2392, 2630
ScrFI	CCNGG	7 cut(s)	140, 170, 390, 1440, 1590, 2098, 2586
SduI	GDGCHC	5 cut(s)	264, 1558, 2139, 2470, 2943
SfaNI	GCATC	8 cut(s)	100, 339, 664, 2214, 2356, 2466, 2610, 2853
SfcI	CTRYAG	1 cut(s)	1656
Sfr274I	CTCGAG	1 cut(s)	2152
SfuI	TTCGAA	1 cut(s)	800
SinI	GGWCC	2 cut(s)	142, 2919
SlaI	CTCGAG	1 cut(s)	2152
SmiMI	CAYNNNNRTG	3 cut(s)	522, 962, 3038
SmlI	CTYRAG	4 cut(s)	62, 359, 2152, 2357
SmoI	CTYRAG	4 cut(s)	62, 359, 2152, 2357
SphI	GCATGC	1 cut(s)	94
SspMI	CTAG	7 cut(s)	287, 1812, 1976, 2243, 2687, 2714, 2786
SstI	GAGCTC	2 cut(s)	2139, 2943
StyD4I	CCNGG	7 cut(s)	138, 168, 388, 1438, 1588, 2096, 2584
StyI	CCWWGG	1 cut(s)	2470
TaiI	ACGT	6 cut(s)	312, 437, 962, 1004, 2955, 3181
TatI	WGTACW	6 cut(s)	653, 991, 1501, 1888, 2871, 2955
Tru1I	TTAA	7 cut(s)	408, 462, 1344, 1506, 2172, 2211, 2334
Tru9I	TTAA	7 cut(s)	408, 462, 1344, 1506, 2172, 2211, 2334
TscAI	CASTG	3 cut(s)	161, 1558, 1687
TseFI	GTSAC	2 cut(s)	418, 2014
TseI	GCWGC	7 cut(s)	733, 1648, 1942, 2167, 2369, 2988, 2991
Tsp45I	GTSAC	2 cut(s)	418, 2014
TspGWI	ACGGA	5 cut(s)	727, 1571, 1772, 2912, 3131
TspRI	CASTG	3 cut(s)	161, 1558, 1687
Tth111I	GACNNNGTC	1 cut(s)	308
Van91I	CCANNNNNTGG	1 cut(s)	438
VpaK11BI	GGWCC	2 cut(s)	142, 2919
XapI	RAATTY	5 cut(s)	602, 688, 1511, 2671, 2789
XceI	RCATGY	4 cut(s)	94, 910, 1990, 3039
XhoI	CTCGAG	1 cut(s)	2152
XmiI	GTMKAC	2 cut(s)	666, 1235
XspI	CTAG	7 cut(s)	287, 1812, 1976, 2243, 2687, 2714, 2786
ZrmI	AGTACT	4 cut(s)	655, 1503, 1890, 2873
Zsp2I	ATGCAT	1 cut(s)	2075

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.