Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0010443

Physical Location & Seq

Genomic Coordinates Forward (+)

2742361 .. 2744463

Gene Structure 2103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g04190.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGCATGGAGAAAGATCGATCAGTGATGAAAACGGCAAATCGAGCCGGAACAAGCAAACAAAACTCAGGAGGAAAGAGCTGGGATTGTCGTGCATGCTAAACACCGAACTCGGTGCTGTCCTCGCCGTCATCCGCCGTCCCCTCAACCAGACTTCCCACTGCTTCGCCGCCCCGGAAGACACCATCGACCCTTCCCTTCTCCAATCCCTAAAATCCCTCCGCGCCCTGATCTTCAACCCCCAGCAGGAATGGCGCACAATAGACCCCTCCATCTACCTCTCCCCCTTCCTGGATGTCATCCAAAGCGAGGACGTCCACGCCGCTGCTACGCGCGTCGCCCTCTCCGCCACGCTGAAGATTATCAAGCTCGGAGTCTTCGATGAGAAGACTCCGGGGGCGAAAGAAGCTATTAACACCATGGTCACATCCATCACCACGTGCCGGCTCGAAAGGACCGATTCTGTCAACGAGGACGCCGTGATGCTGAACATCCTTCAGGTCCTGACCGGAATCATGAACCACCGCGCTTCGGTTCTGCTCTCCGATCAGTCAGTGTGCACAATTGTGAACACCTGTTTTCAGGTGGTTCAGCAATCGGTGAACAGAGGAGACTTGCTCATGCGAAGTGCGAGGTACACAATGCACGAGCTGATCCAGATCATTTTTTCGCGGTTGCCGGAAATTGATTTCAGGGATGACGAGAGCTTGGCCAGTACTGACACTGAGGACGCCGATGCAGACGATGGGAATATGGATTCCGGATATGGGATCCGGTGCGCGGTTGATATTTTTCACTTCTTGTGTTCTTTGTTGAATGTGGTTCAGGTTGTTGAGACAGATCAAGGGTCTACTGTGCAAACTGCCAACGAGGATGTGCAGCTTTTTGCTCTCGTTCTGATCAACTCTGCAATCGATTTGAGCGGGGATGGAATCGGGTCGCATTCGAAGTTGTTGAGGATGATGAAAGATGATCTCTTTCACCACTTGGTTCACTATGGCACGCGTTCAAGCCCGCTTGTTTTTTCCATGATTTGCAGTACGGTTTTGAACATGTATCACTTTCTTCGGAGGTTCATTCGTCTTCAGTTAGAAGCATTCTTCACGTTTGTGCTGTTTCGAGTTTCAGCTCCCGGAGTGTCAATTCAACTTCAAGAGGTTGCACTTGAAGGGATTATAAATTTCTGCAGACAGATGACATTCGTCGTAGAGGTCTATGTGAACTACGACTGTGATCCGCTTTGCCATAATGTGTTTGAGGAGATTGGGAAGTTGCTTTGCAAGCTGTCTTTTCCGGTCGCAAGCCCATTGACAACTTTACAGATACAAGCCTTTGAAGGGTTAGTTATCATGATCCACAACATTGCAGACAGTATTGATAGAGAAAACGATACAAGCCCTTCCGGACCCTACCCAATTGAGATCAGAGAGTATACGCCGTTTTGGGAAGACAAAGCGAAAGATGATTCAGAAGCTTGGGTGCAATTTGTAAGGCTGAGGAAAGCGCAGAAGAGGAAAATATTGATTGCCGGACACCATTTTAATTGCGACGAAAAGAAGGGAATGGAGTACTTGAAGCTTTCCAATTTAGTCTCTGACCCTCCAGATCCAAAGACTTTGGCTTATTTCTTTCGTTACACTCCTGGGCTTGACAAGACGATGATAGGCGATTATCTTGGTGATCCTGATGAGTTTCACATCAAAGTACTTAAAGACTTCACAGGAGCCTTTGGATTTTCAGGCATGAATCTCGATAGTGCTCTCCGAACCTATCTGGAGACTTTCCGTTTGCCAGGAGAGTCCCAGAAGATTCAGAGGATTCTCGAAGTGTTTTCAGAGAGTTTTTTTGAACAGCAGTCTGCAGATGTTTTCGTGAACAAAGATACTGTATACATTCTTTGCTACTCTCTCATTATGCTCAATACTGACCAGCACAATCCGCAAGTAAAGAAGAAGATGACGGAAGAAGAGCTCATCAGGAATAATAGGGCAATCAATGGAGAACGATCTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0005085 GO:0005086 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0008150 GO:0009846 GO:0009856 GO:0012505 GO:0016020 GO:0016192 GO:0019899 GO:0022414 GO:0031984 GO:0032501 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0051020 GO:0051179 GO:0051234 GO:0051704 GO:0065007 GO:0065009 GO:0090406 GO:0098772 GO:0098791 GO:0120025

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

DCB Sec7 Sec7_N

Protein Analysis

671

Amino Acids

75.79

Weight (kDa)

5.33

Isoelectric Point (pI)

44.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19610
fragaria_vesca	FvH4_1g05140
malus_domestica	MD02G1050300.v1.1 MD15G1187600.v1.1
prunus_persica	Prupe.7G228800_v2.0.a1
pyrus_communis	pycom02g04190 pycom02g04200 pycom15g16840
rosa_chinensis	RchiOBHm_Chr2g0090771 RchiOBHm_Chr2g0090781
rosa_laevigata	RLG00000016142
rosa_multiflora	Rmu_co8351113.1_g000001 Rmu_ssc0000367.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150830
rosa_rugosa	Rorug02G0010400
rosa_samantha	Rh2AG056400 Rh2BG055100 Rh2CG057500 Rh2DG056000 Rh2DG056100
rosa_wichuraiana	Rw2G004610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1175
AatII	GACGTC	1 cut(s)	315
AccBSI	CCGCTC	1 cut(s)	921
AccI	GTMKAC	3 cut(s)	848, 1430, 1887
AccII	CGCG	7 cut(s)	222, 331, 333, 525, 670, 779, 1003
AccIII	TCCGGA	2 cut(s)	758, 1400
AclWI	GGATC	7 cut(s)	646, 763, 776, 1226, 1345, 1598, 1673
AcoI	YGGCCR	1 cut(s)	708
AcsI	RAATTY	1 cut(s)	1177
AcuI	CTGAAG	3 cut(s)	374, 479, 1067
AcvI	CACGTG	1 cut(s)	438
AcyI	GRCGYC	3 cut(s)	312, 474, 729
AdeI	CACNNNGTG	1 cut(s)	438
AfaI	GTAC	5 cut(s)	635, 715, 1039, 1568, 1704
AfiI	CCNNNNNNNGG	8 cut(s)	244, 289, 307, 441, 529, 765, 778, 1335
AflIII	ACRYGT	2 cut(s)	1001, 1050
AjnI	CCWGG	3 cut(s)	288, 1639, 1789
AleI	CACNNNNGTG	2 cut(s)	563, 1106
Alw21I	GWGCWC	3 cut(s)	560, 1759, 1971
Alw26I	GTCTC	4 cut(s)	603, 827, 1594, 1769
Alw44I	GTGCAC	1 cut(s)	556
AlwI	GGATC	7 cut(s)	646, 763, 776, 1226, 1345, 1598, 1673
AlwNI	CAGNNNCTG	1 cut(s)	502
Aor13HI	TCCGGA	2 cut(s)	758, 1400
AoxI	GGCC	1 cut(s)	708
ApaLI	GTGCAC	1 cut(s)	556
ApeKI	GCWGC	2 cut(s)	323, 877
ApoI	RAATTY	1 cut(s)	1177
ArsI	GACNNNNNNTTYG	2 cut(s)	1768, 1800
AspLEI	GCGC	6 cut(s)	224, 255, 333, 527, 779, 1504
AspS9I	GGNCC	3 cut(s)	453, 499, 1403
AsuC2I	CCSGG	3 cut(s)	173, 393, 1131
AsuHPI	GGTGA	4 cut(s)	424, 610, 971, 1688
AsuII	TTCGAA	1 cut(s)	944
AvaII	GGWCC	3 cut(s)	453, 499, 1403
BaeGI	GKGCMC	1 cut(s)	560
BalI	TGGCCA	1 cut(s)	710
BamHI	GGATCC	1 cut(s)	768
BanII	GRGCYC	1 cut(s)	1971
BauI	CACGAG	1 cut(s)	644
BbrPI	CACGTG	1 cut(s)	438
BbsI	GAAGAC	5 cut(s)	183, 367, 392, 1073, 1452
Bbv12I	GWGCWC	3 cut(s)	560, 1759, 1971
BbvCI	CCTCAGC	1 cut(s)	1493
BbvI	GCAGC	2 cut(s)	310, 889
BccI	CCATC	5 cut(s)	191, 278, 437, 737, 920
BceAI	ACGGC	5 cut(s)	49, 110, 120, 461, 1420
BcgI	CGANNNNNNTGC	4 cut(s)	95, 129, 1729, 1763
BciT130I	CCWGG	3 cut(s)	290, 1641, 1791
BclI	TGATCA	1 cut(s)	897
BcnI	CCSGG	3 cut(s)	173, 393, 1131
BcoDI	GTCTC	4 cut(s)	603, 827, 1594, 1769
BfaI	CTAG	1 cut(s)	2011
BfmI	CTRYAG	2 cut(s)	1183, 1857
BisI	GCNGC	4 cut(s)	168, 321, 324, 878
BlsI	GCNGC	4 cut(s)	169, 322, 325, 879
BmcAI	AGTACT	3 cut(s)	715, 1568, 1704
Bme1390I	CCNGG	6 cut(s)	173, 290, 393, 1131, 1641, 1791
Bme18I	GGWCC	3 cut(s)	453, 499, 1403
BmgT120I	GGNCC	3 cut(s)	453, 499, 1403
BmiI	GGNNCC	3 cut(s)	770, 1405, 1723
BmrFI	CCNGG	6 cut(s)	173, 290, 393, 1131, 1641, 1791
BmsI	GCATC	2 cut(s)	471, 724
BoxI	GACNNNNGTC	1 cut(s)	1199
BpiI	GAAGAC	5 cut(s)	183, 367, 392, 1073, 1452
BplI	GAGNNNNNCTC	2 cut(s)	600, 632
BpmI	CTGGAG	2 cut(s)	1584, 1793
Bpu10I	CCTNAGC	1 cut(s)	1493
Bpu14I	TTCGAA	1 cut(s)	944
BpuMI	CCSGG	3 cut(s)	173, 393, 1131
Bsa29I	ATCGAT	2 cut(s)	17, 912
BsaAI	YACGTR	1 cut(s)	438
BsaBI	GATNNNNATC	1 cut(s)	656
BsaHI	GRCGYC	3 cut(s)	312, 474, 729
BsaJI	CCNNGG	4 cut(s)	171, 392, 417, 1640
BsaWI	WCCGGW	5 cut(s)	506, 758, 771, 1291, 1400
Bsc4I	CCNNNNNNNGG	8 cut(s)	244, 289, 307, 441, 529, 765, 778, 1335
Bse118I	RCCGGY	1 cut(s)	441
Bse1I	ACTGG	1 cut(s)	711
Bse3DI	GCAATG	1 cut(s)	1359
Bse8I	GATNNNNATC	1 cut(s)	656
BseAI	TCCGGA	2 cut(s)	758, 1400
BseBI	CCWGG	3 cut(s)	290, 1641, 1791
BseCI	ATCGAT	2 cut(s)	17, 912
BseDI	CCNNGG	4 cut(s)	171, 392, 417, 1640
BseGI	GGATG	9 cut(s)	129, 297, 298, 425, 489, 700, 877, 931, 963
BseJI	GATNNNNATC	1 cut(s)	656
BseLI	CCNNNNNNNGG	8 cut(s)	244, 289, 307, 441, 529, 765, 778, 1335
BseMI	GCAATG	1 cut(s)	1359
BseMII	CTCAG	3 cut(s)	79, 714, 1484
BseNI	ACTGG	1 cut(s)	711
BseRI	GAGGAG	2 cut(s)	621, 1271
BseSI	GKGCMC	1 cut(s)	560
BseXI	GCAGC	2 cut(s)	310, 889
BseYI	CCCAGC	2 cut(s)	79, 240
BsgI	GTGCAG	1 cut(s)	896
Bsh1236I	CGCG	7 cut(s)	222, 331, 333, 525, 670, 779, 1003
Bsh1285I	CGRYCG	1 cut(s)	1296
BshFI	GGCC	1 cut(s)	710
BshVI	ATCGAT	2 cut(s)	17, 912
BsiEI	CGRYCG	1 cut(s)	1296
BsiHKAI	GWGCWC	3 cut(s)	560, 1759, 1971
BslFI	GGGAC	2 cut(s)	123, 1783
BslI	CCNNNNNNNGG	8 cut(s)	244, 289, 307, 441, 529, 765, 778, 1335
BsmAI	GTCTC	4 cut(s)	603, 827, 1594, 1769
BsmFI	GGGAC	2 cut(s)	123, 1783
BsmI	GAATGC	2 cut(s)	940, 1094
BsnI	GGCC	1 cut(s)	710
Bsp119I	TTCGAA	1 cut(s)	944
Bsp1286I	GDGCHC	3 cut(s)	560, 1759, 1971
Bsp13I	TCCGGA	2 cut(s)	758, 1400
Bsp19I	CCATGG	1 cut(s)	417
BspANI	GGCC	1 cut(s)	710
BspCNI	CTCAG	3 cut(s)	78, 715, 1485
BspDI	ATCGAT	2 cut(s)	17, 912
BspEI	TCCGGA	2 cut(s)	758, 1400
BspFNI	CGCG	7 cut(s)	222, 331, 333, 525, 670, 779, 1003
BspHI	TCATGA	2 cut(s)	513, 1347
BspLI	GGNNCC	3 cut(s)	770, 1405, 1723
BspMAI	CTGCAG	2 cut(s)	1187, 1861
BspPI	GGATC	7 cut(s)	646, 763, 776, 1226, 1345, 1598, 1673
BspQI	GCTCTTC	1 cut(s)	1959
BspT104I	TTCGAA	1 cut(s)	944
BsrBI	CCGCTC	1 cut(s)	921
BsrDI	GCAATG	1 cut(s)	1359
BsrFI	RCCGGY	1 cut(s)	441
BsrI	ACTGG	1 cut(s)	711
BssAI	RCCGGY	1 cut(s)	441
BssECI	CCNNGG	4 cut(s)	171, 392, 417, 1640
BssNAI	GTATAC	2 cut(s)	1431, 1888
BssNI	GRCGYC	3 cut(s)	312, 474, 729
BssSI	CACGAG	1 cut(s)	644
BssT1I	CCWWGG	1 cut(s)	417
Bst1107I	GTATAC	2 cut(s)	1431, 1888
Bst2BI	CACGAG	1 cut(s)	644
Bst2UI	CCWGG	3 cut(s)	290, 1641, 1791
Bst4CI	ACNGT	5 cut(s)	853, 1042, 1229, 1370, 1885
Bst6I	CTCTTC	2 cut(s)	1502, 1959
BstACI	GRCGYC	3 cut(s)	312, 474, 729
BstBAI	YACGTR	1 cut(s)	438
BstBI	TTCGAA	1 cut(s)	944
BstC8I	GCNNGC	6 cut(s)	95, 443, 1001, 1013, 1280, 1300
BstDEI	CTNAG	3 cut(s)	65, 723, 1493
BstDSI	CCRYGG	1 cut(s)	417
BstF5I	GGATG	9 cut(s)	129, 297, 298, 425, 489, 700, 877, 931, 963
BstFNI	CGCG	7 cut(s)	222, 331, 333, 525, 670, 779, 1003
BstHHI	GCGC	6 cut(s)	224, 255, 333, 527, 779, 1504
BstMAI	GTCTC	4 cut(s)	603, 827, 1594, 1769
BstMCI	CGRYCG	1 cut(s)	1296
BstMWI	GCNNNNNNNGC	7 cut(s)	42, 122, 250, 344, 404, 1279, 1936
BstNI	CCWGG	3 cut(s)	290, 1641, 1791
BstNSI	RCATGY	2 cut(s)	97, 1054
BstPAI	GACNNNNGTC	1 cut(s)	1199
BstSCI	CCNGG	6 cut(s)	171, 288, 391, 1129, 1639, 1789
BstSFI	CTRYAG	2 cut(s)	1183, 1857
BstSLI	GKGCMC	1 cut(s)	560
BstUI	CGCG	7 cut(s)	222, 331, 333, 525, 670, 779, 1003
BstV1I	GCAGC	2 cut(s)	310, 889
BstV2I	GAAGAC	5 cut(s)	183, 367, 392, 1073, 1452
BstX2I	RGATCY	2 cut(s)	768, 1603
BstYI	RGATCY	2 cut(s)	768, 1603
BstZ17I	GTATAC	2 cut(s)	1431, 1888
Bsu15I	ATCGAT	2 cut(s)	17, 912
BsuRI	GGCC	1 cut(s)	710
BsuTUI	ATCGAT	2 cut(s)	17, 912
BtgI	CCRYGG	1 cut(s)	417
BtsCI	GGATG	9 cut(s)	129, 297, 298, 425, 489, 700, 877, 931, 963
BtsI	GCAGTG	1 cut(s)	157
BtsIMutI	CAGTG	4 cut(s)	28, 157, 558, 720
Cac8I	GCNNGC	6 cut(s)	95, 443, 1001, 1013, 1280, 1300
CaiI	CAGNNNCTG	1 cut(s)	502
CciI	TCATGA	2 cut(s)	513, 1347
CfoI	GCGC	6 cut(s)	224, 255, 333, 527, 779, 1504
Cfr10I	RCCGGY	1 cut(s)	441
Cfr13I	GGNCC	3 cut(s)	453, 499, 1403
ClaI	ATCGAT	2 cut(s)	17, 912
CseI	GACGC	3 cut(s)	322, 482, 737
Csp6I	GTAC	5 cut(s)	634, 714, 1038, 1567, 1703
CviAII	CATG	9 cut(s)	5, 94, 418, 514, 619, 1027, 1051, 1348, 1741
CviQI	GTAC	5 cut(s)	634, 714, 1038, 1567, 1703
DdeI	CTNAG	3 cut(s)	65, 723, 1493
DraIII	CACNNNGTG	1 cut(s)	438
EaeI	YGGCCR	1 cut(s)	708
Eam1104I	CTCTTC	2 cut(s)	1502, 1959
EarI	CTCTTC	2 cut(s)	1502, 1959
EciI	GGCGGA	2 cut(s)	122, 334
Ecl136II	GAGCTC	1 cut(s)	1969
Eco130I	CCWWGG	1 cut(s)	417
Eco24I	GRGCYC	1 cut(s)	1971
Eco47I	GGWCC	3 cut(s)	453, 499, 1403
Eco53kI	GAGCTC	1 cut(s)	1969
Eco57I	CTGAAG	3 cut(s)	374, 479, 1067
Eco72I	CACGTG	1 cut(s)	438
EcoICRI	GAGCTC	1 cut(s)	1969
EcoO109I	RGGNCCY	1 cut(s)	499
EcoRII	CCWGG	3 cut(s)	288, 1639, 1789
EcoT14I	CCWWGG	1 cut(s)	417
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	1971
ErhI	CCWWGG	1 cut(s)	417
FaeI	CATG	9 cut(s)	8, 97, 421, 517, 622, 1030, 1054, 1351, 1744
FaqI	GGGAC	2 cut(s)	123, 1783
FatI	CATG	9 cut(s)	4, 93, 417, 513, 618, 1026, 1050, 1347, 1740
FauI	CCCGC	2 cut(s)	914, 1020
FbaI	TGATCA	1 cut(s)	897
FblI	GTMKAC	3 cut(s)	848, 1430, 1887
Fnu4HI	GCNGC	4 cut(s)	168, 321, 324, 878
FokI	GGATG	9 cut(s)	116, 284, 305, 412, 476, 707, 884, 938, 970
FriOI	GRGCYC	1 cut(s)	1971
Fsp4HI	GCNGC	4 cut(s)	168, 321, 324, 878
FspBI	CTAG	1 cut(s)	2011
GlaI	GCGC	6 cut(s)	223, 254, 332, 526, 778, 1503
GluI	GCNGC	4 cut(s)	168, 321, 324, 878
GsaI	CCCAGC	2 cut(s)	83, 244
GsuI	CTGGAG	2 cut(s)	1584, 1793
HaeIII	GGCC	1 cut(s)	710
HgaI	GACGC	3 cut(s)	322, 482, 737
HhaI	GCGC	6 cut(s)	224, 255, 333, 527, 779, 1504
Hin1I	GRCGYC	3 cut(s)	312, 474, 729
Hin1II	CATG	9 cut(s)	8, 97, 421, 517, 622, 1030, 1054, 1351, 1744
Hin6I	GCGC	6 cut(s)	222, 253, 331, 525, 777, 1502
HinP1I	GCGC	6 cut(s)	222, 253, 331, 525, 777, 1502
HincII	GTYRAC	1 cut(s)	466
HindII	GTYRAC	1 cut(s)	466
HindIII	AAGCTT	2 cut(s)	1470, 1574
HphI	GGTGA	4 cut(s)	424, 610, 971, 1688
Hpy99I	CGWCG	3 cut(s)	338, 1205, 1550
HpyAV	CCTTC	8 cut(s)	201, 206, 295, 503, 1160, 1328, 1407, 1549
HpyCH4III	ACNGT	5 cut(s)	853, 1042, 1229, 1370, 1885
HpyCH4IV	ACGT	3 cut(s)	312, 437, 1103
HpyF10VI	GCNNNNNNNGC	7 cut(s)	42, 122, 250, 344, 404, 1279, 1936
HpyF3I	CTNAG	3 cut(s)	65, 723, 1493
HpySE526I	ACGT	3 cut(s)	312, 437, 1103
Hsp92I	GRCGYC	3 cut(s)	312, 474, 729
Hsp92II	CATG	9 cut(s)	8, 97, 421, 517, 622, 1030, 1054, 1351, 1744
HspAI	GCGC	6 cut(s)	222, 253, 331, 525, 777, 1502
Kpn2I	TCCGGA	2 cut(s)	758, 1400
KroI	GCCGGC	1 cut(s)	441
KroNI	GCCGGC	1 cut(s)	443
Ksp22I	TGATCA	1 cut(s)	897
LguI	GCTCTTC	1 cut(s)	1959
LmnI	GCTCC	2 cut(s)	1132, 1721
Lsp1109I	GCAGC	2 cut(s)	310, 889
LweI	GCATC	2 cut(s)	471, 724
MaeI	CTAG	1 cut(s)	2011
MaeII	ACGT	3 cut(s)	312, 437, 1103
MaeIII	GTNAC	2 cut(s)	421, 1631
MbiI	CCGCTC	1 cut(s)	921
MfeI	CAATTG	2 cut(s)	561, 1413
MflI	RGATCY	2 cut(s)	768, 1603
MhlI	GDGCHC	3 cut(s)	560, 1759, 1971
MlsI	TGGCCA	1 cut(s)	710
MluCI	AATT	8 cut(s)	561, 681, 1140, 1177, 1413, 1481, 1540, 1582
MluI	ACGCGT	1 cut(s)	1001
MluNI	TGGCCA	1 cut(s)	710
MlyI	GAGTC	3 cut(s)	381, 382, 1805
Mox20I	TGGCCA	1 cut(s)	710
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	2 cut(s)	758, 1400
MroNI	GCCGGC	1 cut(s)	441
MscI	TGGCCA	1 cut(s)	710
MseI	TTAA	3 cut(s)	411, 1539, 1707
MslI	CAYNNNNRTG	2 cut(s)	563, 1106
Msp20I	TGGCCA	1 cut(s)	710
MspA1I	CMGCKG	1 cut(s)	323
MspR9I	CCNGG	6 cut(s)	173, 290, 393, 1131, 1641, 1791
MunI	CAATTG	2 cut(s)	561, 1413
Mva1269I	GAATGC	2 cut(s)	940, 1094
MvaI	CCWGG	3 cut(s)	290, 1641, 1791
MvnI	CGCG	7 cut(s)	222, 331, 333, 525, 670, 779, 1003
MwoI	GCNNNNNNNGC	7 cut(s)	42, 122, 250, 344, 404, 1279, 1936
NaeI	GCCGGC	1 cut(s)	443
NciI	CCSGG	3 cut(s)	173, 393, 1131
NcoI	CCATGG	1 cut(s)	417
NgoMIV	GCCGGC	1 cut(s)	441
NlaIII	CATG	9 cut(s)	8, 97, 421, 517, 622, 1030, 1054, 1351, 1744
NlaIV	GGNNCC	3 cut(s)	770, 1405, 1723
NmuCI	GTSAC	1 cut(s)	421
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	97, 1054
NspV	TTCGAA	1 cut(s)	944
OliI	CACNNNNGTG	2 cut(s)	563, 1106
PaeI	GCATGC	1 cut(s)	97
PagI	TCATGA	2 cut(s)	513, 1347
PciI	ACATGT	1 cut(s)	1050
PciSI	GCTCTTC	1 cut(s)	1959
PcsI	WCGNNNNNNNCGW	3 cut(s)	375, 453, 474
PctI	GAATGC	2 cut(s)	940, 1094
PdiI	GCCGGC	1 cut(s)	443
PfeI	GAWTC	8 cut(s)	458, 510, 755, 930, 1463, 1744, 1807, 1816
PfoI	TCCNGGA	2 cut(s)	288, 1129
PkrI	GCNGC	4 cut(s)	169, 322, 325, 879
PleI	GAGTC	3 cut(s)	380, 382, 1804
PmaCI	CACGTG	1 cut(s)	438
PmlI	CACGTG	1 cut(s)	438
PpsI	GAGTC	3 cut(s)	380, 382, 1804
Ppu21I	YACGTR	1 cut(s)	438
PpuMI	RGGWCCY	1 cut(s)	499
PscI	ACATGT	1 cut(s)	1050
PshAI	GACNNNNGTC	1 cut(s)	1199
PsiI	TTATAA	1 cut(s)	1175
Psp124BI	GAGCTC	1 cut(s)	1971
Psp5II	RGGWCCY	1 cut(s)	499
Psp6I	CCWGG	3 cut(s)	288, 1639, 1789
PspCI	CACGTG	1 cut(s)	438
PspFI	CCCAGC	2 cut(s)	79, 240
PspGI	CCWGG	3 cut(s)	288, 1639, 1789
PspN4I	GGNNCC	3 cut(s)	770, 1405, 1723
PspPI	GGNCC	3 cut(s)	453, 499, 1403
PspPPI	RGGWCCY	1 cut(s)	499
PstI	CTGCAG	2 cut(s)	1187, 1861
PstNI	CAGNNNCTG	1 cut(s)	502
PsuI	RGATCY	2 cut(s)	768, 1603
RsaI	GTAC	5 cut(s)	635, 715, 1039, 1568, 1704
RsaNI	GTAC	5 cut(s)	634, 714, 1038, 1567, 1703
RseI	CAYNNNNRTG	2 cut(s)	563, 1106
SacI	GAGCTC	1 cut(s)	1971
SapI	GCTCTTC	1 cut(s)	1959
SaqAI	TTAA	3 cut(s)	411, 1539, 1707
SatI	GCNGC	4 cut(s)	168, 321, 324, 878
Sau96I	GGNCC	3 cut(s)	453, 499, 1403
ScaI	AGTACT	3 cut(s)	715, 1568, 1704
SchI	GAGTC	3 cut(s)	381, 382, 1805
ScrFI	CCNGG	6 cut(s)	173, 290, 393, 1131, 1641, 1791
SduI	GDGCHC	3 cut(s)	560, 1759, 1971
SfaNI	GCATC	2 cut(s)	471, 724
SfcI	CTRYAG	2 cut(s)	1183, 1857
SfuI	TTCGAA	1 cut(s)	944
SinI	GGWCC	3 cut(s)	453, 499, 1403
SmiMI	CAYNNNNRTG	2 cut(s)	563, 1106
SphI	GCATGC	1 cut(s)	97
Sse9I	AATT	8 cut(s)	561, 681, 1140, 1177, 1413, 1481, 1540, 1582
SspI	AATATT	1 cut(s)	1518
SspMI	CTAG	1 cut(s)	2011
SstI	GAGCTC	1 cut(s)	1971
StyD4I	CCNGG	6 cut(s)	171, 288, 391, 1129, 1639, 1789
StyI	CCWWGG	1 cut(s)	417
TaaI	ACNGT	5 cut(s)	853, 1042, 1229, 1370, 1885
TaiI	ACGT	3 cut(s)	315, 440, 1106
TaqII	GACCGA	1 cut(s)	470
TasI	AATT	8 cut(s)	561, 681, 1140, 1177, 1413, 1481, 1540, 1582
TatI	WGTACW	3 cut(s)	713, 1566, 1702
TauI	GCSGC	2 cut(s)	170, 323
TfiI	GAWTC	8 cut(s)	458, 510, 755, 930, 1463, 1744, 1807, 1816
Tru1I	TTAA	3 cut(s)	411, 1539, 1707
Tru9I	TTAA	3 cut(s)	411, 1539, 1707
TscAI	CASTG	4 cut(s)	28, 164, 558, 727
TseFI	GTSAC	1 cut(s)	421
TseI	GCWGC	2 cut(s)	323, 877
Tsp45I	GTSAC	1 cut(s)	421
TspDTI	ATGAA	5 cut(s)	42, 530, 977, 1063, 1757
TspGWI	ACGGA	2 cut(s)	1772, 1973
TspRI	CASTG	4 cut(s)	28, 164, 558, 727
VneI	GTGCAC	1 cut(s)	556
VpaK11BI	GGWCC	3 cut(s)	453, 499, 1403
XapI	RAATTY	1 cut(s)	1177
XceI	RCATGY	2 cut(s)	97, 1054
XmiI	GTMKAC	3 cut(s)	848, 1430, 1887
XspI	CTAG	1 cut(s)	2011
ZraI	GACGTC	1 cut(s)	313
ZrmI	AGTACT	3 cut(s)	715, 1568, 1704
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.