FvH4_1g07770

Zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0002000
Physical Location & Seq
Forward (+)
4110764 .. 4117876
7113 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07770.t4

Sequence Viewer

Length: 2772 bp
ATGGAAAAACCCGCCGAAACCCTAACGTCTTTCCCTCCGCACCGTCGGCGAAGGCTGAAGAGCGAAACGCACCGTATTCTGGTTCGGATTCTATCTCACTGCTACGACGTGTCGCAGCTCCCAGACCAAAATGTACCTCCGGAGCTTAATCAAGATAATGGGAGTAATGAATTGGAGGAAGCGACTGGAAAGGAAGGGGGTGGGAATGTTGAATTCGGTGAGCCGGATGGTGTGGAGTGCGATGATTCGGCAGCTCGGCAAGAATTGGTGGCTAATGAGAGGTGTGACGCTGATGGTTCGCGAGAGCTAAATGATCAGATAGAGGATTTCTTCAGTGTGGATGGACAGATGGACGCGATGGACTTTGGGGTTGATTTCGGAGATTTGGAGCTTGGTCCTGGGGAAACGCTGATGGATGAGCTGGAGAAAATTGTGAATGGAAGTGATGACAATACTCCGAAACCGTCAACCGGATCAGGGATTGCGAATGGTAAGGTTGAGTTGTTGAGTAACCAAGAACAATGTGAGGACTTGAGACTTAATGCTACAGTTGGACTGGAAAATGCAGATCAAGTGGTGATTGGTGAAATTCAGAATGGAGGAGAGTCTAATGAACGGACGCATTCCGTGTTGAAGAGTAGCGCATTGGATGTAGAGCCTATAATCCAACAGAAAGAAATGGAGACTTCTGTGTCTGCTGGTGGTGCAGAGGAATCTCTTATTCCCATTACTGAAGTTGCACAGTTCAAGGCGCCAGAGCACTTCAGTCAAGATGTACCTGGAACCTTTGGTTTCTCTTTGGACAAAAACATGGTTGGCGATGCTTCCAAGCCTAGTGGGAGCAGAGGTAAAAGTTTGTCTCAGATAGCTAATGATTTGGAAGAAGAGCATGAAATGCTGCCAAAGGAAAACAAAATGGAAATGCTTTGCACTAGAAATGCTGTGAATTCTCCCAACCATATGAGCGATGTGGAAGAGGGAGAAATTTCTGATGATGAGGGGATGGATGACAGATCGACGGATATGATTTTGCATGATGCAGTTAGGTCTGAGGAAAACAATGAAGTTCAAATACTCAAAGATGTCGACGATCCAAGCTCTGGCAAGGAAGCACTTGTCAAAGAATTTGACTCCAGTTCCTTTCTGAGTAGCATTGCTGACAATGTCCAAAGTCCTAGAGGAGAGGAAATCAGAGAAAGTAGAACTAAGACAATTGGCAGACCTGGAGTTGTCCAGGGGAAAACTATGGAAGCTATAAAGGAAGGGGGCTATGATCCTGTGCTAGAAAGTCGAAGAATTGAAGAGAAATATAGCGGAATTGTGAGGGGTATCTGCTTTCCCGAAGCTTGTACTAATAATCAAGCATCACATGAAAAAATCTCAGAGAACAATGAAGCTGGAAGCTGCGGAACAACATATGAAGATGAGGGGGATGCTGGTGCCTCAAAGAAAAGAAAGCGTCCTTCAAAGGAAAAGAAACAAAGAAAGAAGGCAAAAGAACGAAAGAAGCGAGCAGAGATGAACAGAAAACAAGGTGTTAACAGGCTGAAATTGCATTGCATAGAGAAACCAAAAACTGTAGTGTTTTGCCGCCATTATATTGCTGGAAGGTGCCATGAGAGTGACAAGTGCAAATTTTCACATGATACAGTGCCTTTAACAAAATCCAAGCCCTGTTGTCATTTTGCACGCCATTCATGCCTGAAAGGGGATGACTGCCCATTTGATCATCAGCTTTCTAAGTATCCCTGTGACAATTTTGTTAAGAATGGGTCCTGCATCAGAGGTGATCGATGTCTGTTTTCACACAAGATTCTATCCAAGGAAGAAGGTGCAACTGCTACTAGCAAACCTGAATTGGTGACTCCCTCTGTGCGGGGTAGTTCCAGGTCTGCACAAGTAAAGATAGGTAGTCCCTCCCAGAAGAATTCCCATGCCTTGCCCCACTCAACAGGGACTCATTCTCACAATAATACTGAACTGATCATGGCAAGGACTCTGTTGGAACAACCTACAATGTCTACCAAAGAATTTAGCTTCCTTTCTACAGGGAAACCATCGTTGGTTCATTCCAATATGTCTCAGCAAGGAGTCTCAGCCCCAGATAGGAATACTGGGGCCAAAGCCAGGAACCTAATGCAACAAAGTCCATCAAGTTCCATTCTGAATACCAAAGACAATATAATGACAACTCCACCGGCAGTCACTCCCAAAGGGATAAACTTTTTATCATTTGGAAAAGCATCACCAGATGGTTCCATTGGCAAAAACCAAAACCATCACCAGACAAGCCAAGGTGTGTCAGAGACTGTTCAAAACTTTAATACGGCGCCAAAGGTTATCCAACCTGCACAACCAAAGGCAGCAGACTTCCTATCTGTTGGGAAAGTTCCCATGGCTGATTCTAGTTGTGGAAACCCCTTTAAATTGACTTCAACTTCAGATAATGGTAACAGTACGTGTTTTGGTGAGGGTAAAAGTGTGTTTGATAACCCCCAAATCTCGAGTGCAATCTCATCAAGGTTGCTACCTTCTCCACTTACATCAGGTCAATCTTCAGATTACACAGCATCCAGGTTTAAAGACACAGTGAATCAGAGGGCACTCTGTTCGACACTTGCATTTGCAGCAAAGTATGAATCAAAAAAGACGAATCAGTCATTCGGTTCTACTTTTACACAGGTTGATAGGGAGACCAAGCAGAATGACTCTGGAAAAGTTTTTAATATATTGGATTTCTTGTCCAGTATTAGCAGTACAACCAAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

924

Amino Acids

100.74

Weight (kDa)

5.55

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 691, 2656
Acc36I ACCTGC 1 cut(s) 2356
AccB1I GGYRCC 4 cut(s) 751, 1439, 1611, 2329
AccB7I CCANNNNNTGG 1 cut(s) 1100
AccI GTMKAC 2 cut(s) 1086, 2021
AccII CGCG 2 cut(s) 301, 356
AccIII TCCGGA 1 cut(s) 139
AciI CCGC 6 cut(s) 12, 38, 1314, 1407, 1591, 1876
AclWI GGATC 3 cut(s) 481, 1085, 1268
AcsI RAATTY 8 cut(s) 212, 588, 946, 984, 1124, 1634, 1927, 2030
AcuI CTGAAG 6 cut(s) 77, 316, 748, 753, 2424, 2541
AcyI GRCGYC 2 cut(s) 752, 2330
AfaI GTAC 5 cut(s) 135, 777, 1351, 2458, 2758
AfiI CCNNNNNNNGG 8 cut(s) 79, 470, 477, 1100, 1708, 1875, 2106, 2127
AflIII ACRYGT 2 cut(s) 108, 2459
AgsI TTSAA 8 cut(s) 212, 634, 748, 1070, 1301, 1467, 2315, 2436
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 7 cut(s) 397, 778, 1222, 1233, 1886, 2126, 2573
AjuI GAANNNNNNNTTGG 2 cut(s) 2045, 2077
Alw21I GWGCWC 1 cut(s) 762
Alw26I GTCTC 7 cut(s) 529, 677, 864, 2085, 2098, 2300, 2687
AlwI GGATC 3 cut(s) 481, 1085, 1268
AlwNI CAGNNNCTG 1 cut(s) 2309
Ama87I CYCGRG 1 cut(s) 2503
Aor13HI TCCGGA 1 cut(s) 139
AoxI GGCC 1 cut(s) 2118
ApeKI GCWGC 6 cut(s) 115, 251, 898, 1404, 2363, 2627
ApoI RAATTY 8 cut(s) 212, 588, 946, 984, 1124, 1634, 1927, 2030
ArsI GACNNNNNNTTYG 2 cut(s) 1706, 1738
AspLEI GCGC 3 cut(s) 644, 754, 2332
AspS9I GGNCC 3 cut(s) 395, 1773, 2118
AsuHPI GGTGA 8 cut(s) 230, 589, 596, 1799, 1873, 2238, 2273, 2480
AvaI CYCGRG 1 cut(s) 2503
AvaII GGWCC 2 cut(s) 395, 1773
BaeGI GKGCMC 1 cut(s) 2605
BanI GGYRCC 4 cut(s) 751, 1439, 1611, 2329
BarI GAAGNNNNNNTAC 2 cut(s) 1056, 1088
Bbv12I GWGCWC 1 cut(s) 762
BbvI GCAGC 6 cut(s) 127, 263, 885, 1391, 2375, 2639
BceAI ACGGC 1 cut(s) 2343
BcgI CGANNNNNNTGC 2 cut(s) 2592, 2626
BciT130I CCWGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
BciVI GTATCC 1 cut(s) 1755
BclI TGATCA 3 cut(s) 313, 1726, 1983
BcoDI GTCTC 7 cut(s) 529, 677, 864, 2085, 2098, 2300, 2687
BfaI CTAG 6 cut(s) 834, 933, 1176, 1283, 1845, 2406
BfmI CTRYAG 3 cut(s) 546, 1578, 2046
BfoI RGCGCY 2 cut(s) 755, 2333
BfuAI ACCTGC 1 cut(s) 2356
BfuI GTATCC 1 cut(s) 1755
BisI GCNGC 7 cut(s) 116, 252, 899, 1405, 1591, 2364, 2628
BlsI GCNGC 7 cut(s) 117, 253, 900, 1406, 1592, 2365, 2629
Bme1390I CCNGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
Bme18I GGWCC 2 cut(s) 395, 1773
BmeT110I CYCGRG 1 cut(s) 2503
BmgBI CACGTC 1 cut(s) 109
BmgT120I GGNCC 3 cut(s) 395, 1773, 2118
BmiI GGNNCC 9 cut(s) 753, 784, 1441, 1613, 1774, 2119, 2132, 2257, 2331
BmrFI CCNGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
BmrI ACTGGG 1 cut(s) 2124
BmsI GCATC 7 cut(s) 811, 1027, 1373, 1423, 1788, 2252, 2579
BmuI ACTGGG 1 cut(s) 2124
BpmI CTGGAG 3 cut(s) 443, 1117, 1245
BpuEI CTTGAG 1 cut(s) 553
Bsa29I ATCGAT 1 cut(s) 1792
BsaAI YACGTR 1 cut(s) 2460
BsaHI GRCGYC 2 cut(s) 752, 2330
BsaI GGTCTC 1 cut(s) 2687
BsaJI CCNNGG 5 cut(s) 398, 1234, 1821, 2293, 2394
BsaWI WCCGGW 2 cut(s) 139, 470
BsaXI ACNNNNNCTCC 2 cut(s) 832, 862
Bsc4I CCNNNNNNNGG 8 cut(s) 79, 470, 477, 1100, 1708, 1875, 2106, 2127
Bse118I RCCGGY 1 cut(s) 2197
Bse1I ACTGG 5 cut(s) 190, 561, 1134, 2119, 2745
Bse3DI GCAATG 2 cut(s) 1152, 1555
BseAI TCCGGA 1 cut(s) 139
BseBI CCWGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
BseCI ATCGAT 1 cut(s) 1792
BseDI CCNNGG 5 cut(s) 398, 1234, 1821, 2293, 2394
BseGI GGATG 9 cut(s) 232, 346, 421, 655, 1008, 1012, 1438, 1717, 2570
BseLI CCNNNNNNNGG 8 cut(s) 79, 470, 477, 1100, 1708, 1875, 2106, 2127
BseMI GCAATG 2 cut(s) 1152, 1555
BseMII CTCAG 6 cut(s) 875, 1041, 1136, 1395, 2096, 2109
BseNI ACTGG 5 cut(s) 190, 561, 1134, 2119, 2745
BseRI GAGGAG 2 cut(s) 615, 1194
BseSI GKGCMC 1 cut(s) 2605
BseXI GCAGC 6 cut(s) 127, 263, 885, 1391, 2375, 2639
BsgI GTGCAG 3 cut(s) 726, 1878, 2334
Bsh1236I CGCG 2 cut(s) 301, 356
BshFI GGCC 1 cut(s) 2120
BshNI GGYRCC 4 cut(s) 751, 1439, 1611, 2329
BshVI ATCGAT 1 cut(s) 1792
BsiHKAI GWGCWC 1 cut(s) 762
BsiHKCI CYCGRG 1 cut(s) 2503
BsiSI CCGG 4 cut(s) 140, 224, 471, 2198
BslFI GGGAC 2 cut(s) 1899, 1969
BslI CCNNNNNNNGG 8 cut(s) 79, 470, 477, 1100, 1708, 1875, 2106, 2127
BsmAI GTCTC 7 cut(s) 529, 677, 864, 2085, 2098, 2300, 2687
BsmFI GGGAC 2 cut(s) 1899, 1969
BsmI GAATGC 1 cut(s) 622
BsnI GGCC 1 cut(s) 2120
Bso31I GGTCTC 1 cut(s) 2687
BsoBI CYCGRG 1 cut(s) 2503
Bsp1286I GDGCHC 2 cut(s) 762, 2605
Bsp13I TCCGGA 1 cut(s) 139
Bsp143I GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
Bsp19I CCATGG 1 cut(s) 2394
Bsp68I TCGCGA 1 cut(s) 301
BspACI CCGC 6 cut(s) 12, 38, 1314, 1407, 1591, 1876
BspANI GGCC 1 cut(s) 2120
BspCNI CTCAG 6 cut(s) 874, 1042, 1137, 1394, 2095, 2108
BspDI ATCGAT 1 cut(s) 1792
BspEI TCCGGA 1 cut(s) 139
BspFNI CGCG 2 cut(s) 301, 356
BspLI GGNNCC 9 cut(s) 753, 784, 1441, 1613, 1774, 2119, 2132, 2257, 2331
BspMI ACCTGC 1 cut(s) 2356
BspPI GGATC 3 cut(s) 481, 1085, 1268
BspQI GCTCTTC 2 cut(s) 53, 879
BspT107I GGYRCC 4 cut(s) 751, 1439, 1611, 2329
BspTNI GGTCTC 1 cut(s) 2687
BsrDI GCAATG 2 cut(s) 1152, 1555
BsrFI RCCGGY 1 cut(s) 2197
BsrI ACTGG 5 cut(s) 190, 561, 1134, 2119, 2745
BssAI RCCGGY 1 cut(s) 2197
BssECI CCNNGG 5 cut(s) 398, 1234, 1821, 2293, 2394
BssMI GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
BssNI GRCGYC 2 cut(s) 752, 2330
BssT1I CCWWGG 3 cut(s) 1821, 2293, 2394
Bst2UI CCWGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
Bst6I CTCTTC 5 cut(s) 53, 629, 879, 969, 1296
BstACI GRCGYC 2 cut(s) 752, 2330
BstAPI GCANNNNNTGC 1 cut(s) 895
BstBAI YACGTR 1 cut(s) 2460
BstC8I GCNNGC 2 cut(s) 1512, 1690
BstDEI CTNAG 8 cut(s) 861, 1050, 1145, 1206, 1381, 1740, 2082, 2095
BstDSI CCRYGG 1 cut(s) 2394
BstF5I GGATG 9 cut(s) 232, 346, 421, 655, 1008, 1012, 1438, 1717, 2570
BstFNI CGCG 2 cut(s) 301, 356
BstH2I RGCGCY 2 cut(s) 755, 2333
BstHHI GCGC 3 cut(s) 644, 754, 2332
BstKTI GATC 9 cut(s) 316, 476, 571, 1016, 1093, 1276, 1729, 1792, 1986
BstMAI GTCTC 7 cut(s) 529, 677, 864, 2085, 2098, 2300, 2687
BstMBI GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
BstMWI GCNNNNNNNGC 6 cut(s) 46, 704, 895, 1552, 1698, 2627
BstNI CCWGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
BstSCI CCNGG 7 cut(s) 397, 778, 1222, 1233, 1886, 2126, 2573
BstSFI CTRYAG 3 cut(s) 546, 1578, 2046
BstSLI GKGCMC 1 cut(s) 2605
BstUI CGCG 2 cut(s) 301, 356
BstV1I GCAGC 6 cut(s) 127, 263, 885, 1391, 2375, 2639
Bsu15I ATCGAT 1 cut(s) 1792
BsuI GTATCC 1 cut(s) 1755
BsuRI GGCC 1 cut(s) 2120
BsuTUI ATCGAT 1 cut(s) 1792
BtgI CCRYGG 1 cut(s) 2394
BtgZI GCGATG 4 cut(s) 255, 371, 834, 981
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 9 cut(s) 232, 346, 421, 655, 1008, 1012, 1438, 1717, 2570
BtsI GCAGTG 1 cut(s) 97
BtsIMutI CAGTG 4 cut(s) 97, 340, 1656, 2595
BtuMI TCGCGA 1 cut(s) 301
BveI ACCTGC 1 cut(s) 2356
Cac8I GCNNGC 2 cut(s) 1512, 1690
CaiI CAGNNNCTG 1 cut(s) 2309
CfoI GCGC 3 cut(s) 644, 754, 2332
Cfr10I RCCGGY 1 cut(s) 2197
Cfr13I GGNCC 3 cut(s) 395, 1773, 2118
ClaI ATCGAT 1 cut(s) 1792
CseI GACGC 4 cut(s) 296, 362, 628, 1448
Csp6I GTAC 5 cut(s) 134, 776, 1350, 2457, 2757
CspCI CAANNNNNGTGG 2 cut(s) 817, 852
CviQI GTAC 5 cut(s) 134, 776, 1350, 2457, 2757
DdeI CTNAG 8 cut(s) 861, 1050, 1145, 1206, 1381, 1740, 2082, 2095
DinI GGCGCC 2 cut(s) 753, 2331
DpnI GATC 9 cut(s) 315, 475, 570, 1015, 1092, 1275, 1728, 1791, 1985
DpnII GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
DraI TTTAAA 2 cut(s) 2425, 2581
DrdI GACNNNNNNGTC 2 cut(s) 691, 2656
DseDI GACNNNNNNGTC 2 cut(s) 691, 2656
Eam1104I CTCTTC 5 cut(s) 53, 629, 879, 969, 1296
EarI CTCTTC 5 cut(s) 53, 629, 879, 969, 1296
Eco130I CCWWGG 3 cut(s) 1821, 2293, 2394
Eco31I GGTCTC 1 cut(s) 2687
Eco47I GGWCC 2 cut(s) 395, 1773
Eco57I CTGAAG 6 cut(s) 77, 316, 748, 753, 2424, 2541
Eco88I CYCGRG 1 cut(s) 2503
EcoO109I RGGNCCY 1 cut(s) 1773
EcoRI GAATTC 3 cut(s) 212, 946, 1927
EcoRII CCWGG 7 cut(s) 397, 778, 1222, 1233, 1886, 2126, 2573
EcoT14I CCWWGG 3 cut(s) 1821, 2293, 2394
EgeI GGCGCC 2 cut(s) 753, 2331
EheI GGCGCC 2 cut(s) 753, 2331
ErhI CCWWGG 3 cut(s) 1821, 2293, 2394
FaqI GGGAC 2 cut(s) 1899, 1969
FauI CCCGC 2 cut(s) 19, 1869
FauNDI CATATG 2 cut(s) 960, 1417
FbaI TGATCA 3 cut(s) 313, 1726, 1983
FblI GTMKAC 2 cut(s) 1086, 2021
Fnu4HI GCNGC 7 cut(s) 116, 252, 899, 1405, 1591, 2364, 2628
FokI GGATG 9 cut(s) 239, 353, 428, 662, 1015, 1019, 1445, 1724, 2557
Fsp4HI GCNGC 7 cut(s) 116, 252, 899, 1405, 1591, 2364, 2628
FspBI CTAG 6 cut(s) 834, 933, 1176, 1283, 1845, 2406
GlaI GCGC 3 cut(s) 643, 753, 2331
GluI GCNGC 7 cut(s) 116, 252, 899, 1405, 1591, 2364, 2628
GsuI CTGGAG 3 cut(s) 443, 1117, 1245
HaeII RGCGCY 2 cut(s) 755, 2333
HaeIII GGCC 1 cut(s) 2120
HapII CCGG 4 cut(s) 140, 224, 471, 2198
HgaI GACGC 4 cut(s) 296, 362, 628, 1448
HhaI GCGC 3 cut(s) 644, 754, 2332
Hin1I GRCGYC 2 cut(s) 752, 2330
Hin6I GCGC 3 cut(s) 642, 752, 2330
HinP1I GCGC 3 cut(s) 642, 752, 2330
HincII GTYRAC 3 cut(s) 468, 1087, 1540
HindII GTYRAC 3 cut(s) 468, 1087, 1540
HindIII AAGCTT 1 cut(s) 1344
HpaI GTTAAC 1 cut(s) 1540
HpaII CCGG 4 cut(s) 140, 224, 471, 2198
HphI GGTGA 8 cut(s) 230, 589, 596, 1799, 1873, 2238, 2273, 2480
Hpy166II GTNNAC 4 cut(s) 468, 1087, 1540, 2022
Hpy188III TCNNGA 7 cut(s) 140, 152, 300, 770, 1340, 2503, 2712
Hpy8I GTNNAC 4 cut(s) 468, 1087, 1540, 2022
Hpy99I CGWCG 4 cut(s) 48, 110, 1021, 1091
HpyAV CCTTC 8 cut(s) 45, 188, 1256, 1473, 1483, 1602, 1823, 2541
HpyCH4IV ACGT 3 cut(s) 26, 108, 2459
HpyF10VI GCNNNNNNNGC 6 cut(s) 46, 704, 895, 1552, 1698, 2627
HpyF3I CTNAG 8 cut(s) 861, 1050, 1145, 1206, 1381, 1740, 2082, 2095
HpySE526I ACGT 3 cut(s) 26, 108, 2459
Hsp92I GRCGYC 2 cut(s) 752, 2330
HspAI GCGC 3 cut(s) 642, 752, 2330
KasI GGCGCC 2 cut(s) 751, 2329
Kpn2I TCCGGA 1 cut(s) 139
Ksp22I TGATCA 3 cut(s) 313, 1726, 1983
KspAI GTTAAC 1 cut(s) 1540
Kzo9I GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
LguI GCTCTTC 2 cut(s) 53, 879
LmnI GCTCC 4 cut(s) 123, 142, 388, 840
Lsp1109I GCAGC 6 cut(s) 127, 263, 885, 1391, 2375, 2639
LweI GCATC 7 cut(s) 811, 1027, 1373, 1423, 1788, 2252, 2579
MaeI CTAG 6 cut(s) 834, 933, 1176, 1283, 1845, 2406
MaeII ACGT 3 cut(s) 26, 108, 2459
MaeIII GTNAC 7 cut(s) 284, 509, 1622, 1751, 1861, 2203, 2450
MalI GATC 9 cut(s) 315, 475, 570, 1015, 1092, 1275, 1728, 1791, 1985
MboI GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
MfeI CAATTG 1 cut(s) 1212
MhlI GDGCHC 2 cut(s) 762, 2605
Mly113I GGCGCC 2 cut(s) 752, 2330
MlyI GAGTC 7 cut(s) 614, 1124, 1858, 1951, 1990, 2100, 2702
MmeI TCCRAC 4 cut(s) 532, 691, 1983, 2368
MroI TCCGGA 1 cut(s) 139
MseI TTAA 9 cut(s) 147, 540, 1539, 1658, 1764, 2322, 2424, 2580, 2724
MslI CAYNNNNRTG 1 cut(s) 1620
MspI CCGG 4 cut(s) 140, 224, 471, 2198
MspR9I CCNGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
MunI CAATTG 1 cut(s) 1212
Mva1269I GAATGC 1 cut(s) 622
MvaI CCWGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
MvnI CGCG 2 cut(s) 301, 356
MwoI GCNNNNNNNGC 6 cut(s) 46, 704, 895, 1552, 1698, 2627
NarI GGCGCC 2 cut(s) 752, 2330
NcoI CCATGG 1 cut(s) 2394
NdeI CATATG 2 cut(s) 960, 1417
NdeII GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
NlaIV GGNNCC 9 cut(s) 753, 784, 1441, 1613, 1774, 2119, 2132, 2257, 2331
NmeAIII GCCGAG 1 cut(s) 235
NmuCI GTSAC 5 cut(s) 284, 1622, 1751, 1861, 2203
NruI TCGCGA 1 cut(s) 301
PaeR7I CTCGAG 1 cut(s) 2503
PciSI GCTCTTC 2 cut(s) 53, 879
PcsI WCGNNNNNNNCGW 1 cut(s) 1507
PctI GAATGC 1 cut(s) 622
PfeI GAWTC 8 cut(s) 88, 245, 713, 1813, 2402, 2593, 2639, 2653
PflFI GACNNNGTC 1 cut(s) 1163
PflMI CCANNNNNTGG 1 cut(s) 1100
PkrI GCNGC 7 cut(s) 117, 253, 900, 1406, 1592, 2365, 2629
PleI GAGTC 7 cut(s) 613, 1124, 1858, 1951, 1990, 2099, 2702
PluTI GGCGCC 2 cut(s) 755, 2333
PpsI GAGTC 7 cut(s) 613, 1124, 1858, 1951, 1990, 2099, 2702
Ppu21I YACGTR 1 cut(s) 2460
PpuMI RGGWCCY 1 cut(s) 1773
Psp5II RGGWCCY 1 cut(s) 1773
Psp6I CCWGG 7 cut(s) 397, 778, 1222, 1233, 1886, 2126, 2573
PspGI CCWGG 7 cut(s) 397, 778, 1222, 1233, 1886, 2126, 2573
PspN4I GGNNCC 9 cut(s) 753, 784, 1441, 1613, 1774, 2119, 2132, 2257, 2331
PspPI GGNCC 3 cut(s) 395, 1773, 2118
PspPPI RGGWCCY 1 cut(s) 1773
PstNI CAGNNNCTG 1 cut(s) 2309
PsyI GACNNNGTC 1 cut(s) 1163
RruI TCGCGA 1 cut(s) 301
RsaI GTAC 5 cut(s) 135, 777, 1351, 2458, 2758
RsaNI GTAC 5 cut(s) 134, 776, 1350, 2457, 2757
RseI CAYNNNNRTG 1 cut(s) 1620
SalI GTCGAC 1 cut(s) 1085
SapI GCTCTTC 2 cut(s) 53, 879
SaqAI TTAA 9 cut(s) 147, 540, 1539, 1658, 1764, 2322, 2424, 2580, 2724
SatI GCNGC 7 cut(s) 116, 252, 899, 1405, 1591, 2364, 2628
Sau3AI GATC 9 cut(s) 313, 473, 568, 1013, 1090, 1273, 1726, 1789, 1983
Sau96I GGNCC 3 cut(s) 395, 1773, 2118
SchI GAGTC 7 cut(s) 614, 1124, 1858, 1951, 1990, 2100, 2702
ScrFI CCNGG 7 cut(s) 399, 780, 1224, 1235, 1888, 2128, 2575
SduI GDGCHC 2 cut(s) 762, 2605
SfaNI GCATC 7 cut(s) 811, 1027, 1373, 1423, 1788, 2252, 2579
SfcI CTRYAG 3 cut(s) 546, 1578, 2046
SfoI GGCGCC 2 cut(s) 753, 2331
Sfr274I CTCGAG 1 cut(s) 2503
SinI GGWCC 2 cut(s) 395, 1773
SlaI CTCGAG 1 cut(s) 2503
SmiMI CAYNNNNRTG 1 cut(s) 1620
SmlI CTYRAG 2 cut(s) 532, 2503
SmoI CTYRAG 2 cut(s) 532, 2503
SsiI CCGC 6 cut(s) 12, 38, 1314, 1407, 1591, 1876
SspDI GGCGCC 2 cut(s) 751, 2329
SspMI CTAG 6 cut(s) 834, 933, 1176, 1283, 1845, 2406
StyD4I CCNGG 7 cut(s) 397, 778, 1222, 1233, 1886, 2126, 2573
StyI CCWWGG 3 cut(s) 1821, 2293, 2394
TaiI ACGT 3 cut(s) 29, 111, 2462
TaqI TCGA 6 cut(s) 1016, 1086, 1291, 1792, 2504, 2612
TatI WGTACW 2 cut(s) 1349, 2756
TauI GCSGC 1 cut(s) 1593
TfiI GAWTC 8 cut(s) 88, 245, 713, 1813, 2402, 2593, 2639, 2653
Tru1I TTAA 9 cut(s) 147, 540, 1539, 1658, 1764, 2322, 2424, 2580, 2724
Tru9I TTAA 9 cut(s) 147, 540, 1539, 1658, 1764, 2322, 2424, 2580, 2724
TscAI CASTG 4 cut(s) 104, 340, 1656, 2595
TseFI GTSAC 5 cut(s) 284, 1622, 1751, 1861, 2203
TseI GCWGC 6 cut(s) 115, 251, 898, 1404, 2363, 2627
Tsp45I GTSAC 5 cut(s) 284, 1622, 1751, 1861, 2203
TspGWI ACGGA 3 cut(s) 616, 631, 1034
TspRI CASTG 4 cut(s) 104, 340, 1656, 2595
Tth111I GACNNNGTC 1 cut(s) 1163
Van91I CCANNNNNTGG 1 cut(s) 1100
VpaK11BI GGWCC 2 cut(s) 395, 1773
XapI RAATTY 8 cut(s) 212, 588, 946, 984, 1124, 1634, 1927, 2030
XcmI CCANNNNNNNNNTGG 1 cut(s) 1601
XhoI CTCGAG 1 cut(s) 2503
XmiI GTMKAC 2 cut(s) 1086, 2021
XspI CTAG 6 cut(s) 834, 933, 1176, 1283, 1845, 2406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.