MD15G1209300.v1.1

Zinc finger CCCH domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
16783194 .. 16788536
5343 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1209300.v1.1.491

Sequence Viewer

Length: 3126 bp
ATGGAGGAAAACAAAATCGAAACCGAAAGGCCCTCCCAAACTCCAATCGTTTTCCCTCCTCGCCGTCGAAGGCACCTCAACAGCGGAACGTACCGTACATTGGTTCGAATATTCTCTCACTTCGACGAGTCCCAGCATTTAGTTTCCGATCAAAATGTACCTCAAGAGCTTAATCGAGATAATGGCAACAACGAATCGGTGCAAGAAGCTGAAAAGGAAGTGCCGGGGAATGTTGAATTGGTTGGCCCTGACGGTGCGAAGGGCAGAGTGGCTGATGAGTGTTGTAATGGTAATGGTTTTCGAGAAAGGATAGAGCAGATAGAGAGTTTACTGAGCGTGGAAGAAAATGAGGATTTTTCAGGACTGGAAGACACGATAGGCATAGAAAATATTCTTGCCATTGATTTAAAAGATATGGGGTATTTTCCTGAGCAAATGCTGGTGGATGAGCCAGAGTTGGTTGTGAAAGGGAATTGTGAACCCTCCGCCGCATCATTGGACCAGAACCAGAATGGCGGTGATAAGGCTGCATTGTTGACTAACGAAGAAGAACATGTAGAAACTGTGACATCTCAAGATTCGGTTCAAATGGTTTCTGTAAGCCATGGTTCATCTTTAAAAACTGTTGAGTTGACTGAAAGTTTAAATCCAAGAGAGTCTACTGAACAGAAACATTCCTTGTCAAAGACTAGCGCATTGGATGTAGAGCCTATAATGCAACTGGAATCAATGGAACTACAGACTCCTGTTTCTGCCGAGGGTGCGATTGAATTGTCTATTCCAATTACTGAAGTTGGAGCGATTAAGGAGACAGAAATCTTTAGTCAAAATGTCCCTGAAGCCTTTGATTTTTCTTTGAATAAAGATATGGTTGCTGAAGCTTCAAAGCCTACTGATTATAGCAAAGACAAAAGTTTGTTACCAGAAACTAATTCCTTAGAAGTAGTACTTGAAATGCCTGAGAAGTTTAAGGAAACGGAGAAACCAGTTTGTGACATAACGGCAATGAGTTCTACCAACCATACAGATGATGGAGATATTGAAGAGGGAGAAATTTCTGGTGACGATGGGATGGATGGCAGACCAAGTGATGAGCTTTTGCAAGATACAGTAGTACTTGGGGAACAGAAGGTTCACAAGGGGCAGATATCTAAAGATGTAATTGATAGAAAAGAGCAGCTTTGCGAGGAAGTAAATTACAAGGATTTTGGTTCCAGTTCATTTCTGGTGGACGTGGTTGAGGATGGAAAAATTGGCAGAGGGGTGGAACTCAGGGAAAGTAGAAGGACTGATATGGTTTGTAGACCGGGGGTTGTTCAGGGTCAAAATGGAAGTGACTCCCATCCTTTGCTAGATGGTGGAAGAATTGAAATGAAAGATAATCGAGTTGAAATGGGTGTTGACTGGTCTGGAGCTGGAAACCATGGAACCGCGTCTGAAGAAAAGTGGGATGCTGGTGCCTGTAACAAAAGAAAGCGCGGTCCTCCAAATAAGGAAAAGAAAGAAAGGAAGAAGGCAAAAGAACGAAAGAAACGAGCAGAGAAGAACAGGGAACTTGGTGTTAAAAGGCTGAAACTGCAACCATTACAAAAACCAAAGCCTGTAGCATATTGCCGCCATTACCTGAACGGAAAGTGCAATCTGGGTGACCAGTGCAAGTATTCACATGATACAGTGCCGTTAACAAAATCCACGCCCTGTGGCAAATTTGCACGGAATGAGTGCATGAAAGGGGATGACTGCGGATATGATCATGACCTCTCTAAGTATCTCTGTCACCATTTCAAAGACAATGGTTTCTGCGGCAGAGGTGATAGTTGTCTGTTTTCACACAAGATGCCATCCAAGGAAGAGAGTGAAACTACTGCTTGTAAACCTGAATTGAAGCCTCCCATGGTACAGAGTAATTCCAGGTCTCAACAAGTAAACATCGGTGGTGCATCCCAGCAGAATGTCCATGCCTTGGGCTTCTCAACGGGAATCCATTCTCGCAATAATACTAAACAGAATGTGACGGAGAATGTTTTGAAGAAACCTGAACTAGCTACCAAAGGGATTAGCTTTCCCTCTGTTGAGAACTCATCATTGGTTCATTCTAGTATGTCTAAGCAAGGAGGCGTAACCCCTGATAGGAATACGGGTACCAAAGCTGGGAGCCAAATAGATCAAAGTCCATTCAGTTCCATTCAAAATTCCAATGAGATTTTAAAGAGAACACCAGTAACCACTCCTAAAGGAATAAATTTTTTATCATTTGCCAAGGCTTCACCAGATGCTGCAAGAGGTAAAAGCCAAGTCAGCCATCAGACCAGCCCAGGTGTGTCAGAGACTGTACAAAACTCAAATGGGATGCTAAAGTCTGATAAAACAGCAGCATCGCTGGGAACAAGCTTTAATCCTTTTGGGAAATGTTCGGTAGCTAGTCCTACTGGTGGTCAAAACTTGAATGCGATGCTACAGGTTAATCTACCGGCAGCATCGCACAGAACAAACTTTAATCCTTTTGGGAACTCTTCGCTAGCTGGTTCTGGTAGTGACCAAAACTTGAAAGGCATTCAACCAGCAGAATCGCAGGGGACAAGCTTTAATCCTTTCCGGAAATCTTCGGTAACTAGTTCTAGTAGCGACCAGAACTTGAATGGGATGCTACAGAATAATCAACCAGCAGCATCGCAGGGAACAAGCTTTAATCCTTTCGGGAAATCTTCTGTAACTAGTTTTAGTAGTGACCAAAACTTGAGAGGGATTCTACAGGCTCATCAACCGTCAGCATCGCAGGGAACAAGCCTTAATCCTTTCGAGAAATCTTCGGTATCTAGTTCTAGTACAGTAAATCCAGATAGCTTGACTTCCTGCTGGGGTAATGGTAGCAATAGGGATTCCCGTGAGAGTCAAAATACAGCTGATAAACCCCAAAATTCAAGTGCGGTCTCATTGAGGCTGCCACCTTCTCCACTTACTTCAGGTCAATCTTCAGATCATGTAGCATCCAAGTTTTGTAAAGGTACAGCAAATTCATTCCAGAGGGGACTCTTTTCTACCCTAGCATTTGCAGCGAAGTATAGAGCTCAAAACATGAACCAGTCAATTGGTTCAACTGATACTCAAGTCGATAAAGGAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1042

Amino Acids

113.12

Weight (kDa)

5.61

Isoelectric Point (pI)

46.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2141
AccB1I GGYRCC 3 cut(s) 72, 1457, 2141
AccB7I CCANNNNNTGG 1 cut(s) 1963
AccI GTMKAC 2 cut(s) 659, 1303
AccII CGCG 2 cut(s) 1433, 1479
AccIII TCCGGA 1 cut(s) 2595
AcsI RAATTY 6 cut(s) 1053, 1706, 2191, 2242, 2917, 3013
AcuI CTGAAG 6 cut(s) 810, 858, 897, 1458, 2946, 2958
AfiI CCNNNNNNNGG 5 cut(s) 100, 1963, 2130, 2151, 2432
AflIII ACRYGT 1 cut(s) 553
AhlI ACTAGT 2 cut(s) 2612, 2714
AjiI CACGTC 1 cut(s) 1234
AjnI CCWGG 2 cut(s) 1910, 2314
AjuI GAANNNNNNNTTGG 4 cut(s) 221, 253, 2069, 2101
Alw21I GWGCWC 1 cut(s) 3070
Alw26I GTCTC 4 cut(s) 803, 1920, 2321, 2935
AlwNI CAGNNNCTG 2 cut(s) 2276, 2330
Aor13HI TCCGGA 1 cut(s) 2595
AoxI GGCC 2 cut(s) 29, 244
ApeKI GCWGC 8 cut(s) 527, 1177, 2276, 2372, 2474, 2666, 2941, 3053
ApoI RAATTY 6 cut(s) 1053, 1706, 2191, 2242, 2917, 3013
Asp700I GAANNNNTTC 2 cut(s) 390, 1984
Asp718I GGTACC 1 cut(s) 2141
AspLEI GCGC 2 cut(s) 695, 1479
AspS9I GGNCC 4 cut(s) 30, 245, 499, 1481
AsuC2I CCSGG 2 cut(s) 225, 1308
AsuHPI GGTGA 6 cut(s) 530, 1073, 1658, 1769, 1823, 2259
AsuII TTCGAA 1 cut(s) 106
AsuNHI GCTAGC 1 cut(s) 2518
AvaII GGWCC 2 cut(s) 499, 1481
BaeI ACNNNNGTAYC 4 cut(s) 1098, 1131, 3093, 3126
BanI GGYRCC 3 cut(s) 72, 1457, 2141
BanII GRGCYC 1 cut(s) 3070
BbsI GAAGAC 1 cut(s) 375
Bbv12I GWGCWC 1 cut(s) 3070
BbvI GCAGC 8 cut(s) 514, 1189, 2263, 2384, 2486, 2678, 2928, 3065
BccI CCATC 9 cut(s) 1025, 1061, 1066, 1070, 1238, 1349, 1350, 1849, 2310
BceAI ACGGC 3 cut(s) 48, 1017, 1663
BciT130I CCWGG 2 cut(s) 1912, 2316
BclI TGATCA 1 cut(s) 1750
BcnI CCSGG 2 cut(s) 225, 1308
BcoDI GTCTC 4 cut(s) 803, 1920, 2321, 2935
BcuI ACTAGT 2 cut(s) 2612, 2714
BfmI CTRYAG 5 cut(s) 737, 1602, 2456, 2648, 2750
BmcAI AGTACT 2 cut(s) 948, 1116
Bme1390I CCNGG 4 cut(s) 225, 1308, 1912, 2316
Bme18I GGWCC 2 cut(s) 499, 1481
BmgBI CACGTC 1 cut(s) 1234
BmgT120I GGNCC 4 cut(s) 30, 245, 499, 1481
BmiI GGNNCC 6 cut(s) 74, 1213, 1429, 1459, 2143, 2156
BmrFI CCNGG 4 cut(s) 225, 1308, 1912, 2316
BmtI GCTAGC 1 cut(s) 2522
BpiI GAAGAC 1 cut(s) 375
BpmI CTGGAG 1 cut(s) 1431
Bpu10I CCTNAGC 1 cut(s) 429
Bpu14I TTCGAA 1 cut(s) 106
BpuEI CTTGAG 4 cut(s) 147, 558, 2758, 3090
BpuMI CCSGG 2 cut(s) 225, 1308
BsaI GGTCTC 2 cut(s) 1920, 2935
BsaWI WCCGGW 1 cut(s) 2595
Bsc4I CCNNNNNNNGG 5 cut(s) 100, 1963, 2130, 2151, 2432
Bse118I RCCGGY 1 cut(s) 2470
Bse1I ACTGG 9 cut(s) 369, 726, 986, 1215, 1409, 1651, 2219, 2434, 3082
Bse3DI GCAATG 1 cut(s) 1011
BseAI TCCGGA 1 cut(s) 2595
BseBI CCWGG 2 cut(s) 1912, 2316
BseLI CCNNNNNNNGG 5 cut(s) 100, 1963, 2130, 2151, 2432
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 4 cut(s) 323, 420, 951, 1285
BseNI ACTGG 9 cut(s) 369, 726, 986, 1215, 1409, 1651, 2219, 2434, 3082
BseRI GAGGAG 1 cut(s) 48
BseXI GCAGC 8 cut(s) 514, 1189, 2263, 2384, 2486, 2678, 2928, 3065
BseYI CCCAGC 5 cut(s) 132, 1944, 2150, 2380, 2856
Bsh1236I CGCG 2 cut(s) 1433, 1479
BshFI GGCC 2 cut(s) 31, 246
BshNI GGYRCC 3 cut(s) 72, 1457, 2141
BsiHKAI GWGCWC 1 cut(s) 3070
BsiSI CCGG 4 cut(s) 224, 1307, 2471, 2596
BslFI GGGAC 4 cut(s) 115, 818, 2590, 3042
BslI CCNNNNNNNGG 5 cut(s) 100, 1963, 2130, 2151, 2432
BsmAI GTCTC 4 cut(s) 803, 1920, 2321, 2935
BsmFI GGGAC 4 cut(s) 115, 818, 2590, 3042
BsmI GAATGC 2 cut(s) 2452, 2553
BsnI GGCC 2 cut(s) 31, 246
Bso31I GGTCTC 2 cut(s) 1920, 2935
Bsp119I TTCGAA 1 cut(s) 106
Bsp1286I GDGCHC 1 cut(s) 3070
Bsp13I TCCGGA 1 cut(s) 2595
Bsp1407I TGTACA 1 cut(s) 2332
Bsp143I GATC 4 cut(s) 148, 1750, 2164, 2977
Bsp19I CCATGG 3 cut(s) 604, 1423, 1893
BspANI GGCC 2 cut(s) 31, 246
BspCNI CTCAG 4 cut(s) 324, 421, 952, 1284
BspEI TCCGGA 1 cut(s) 2595
BspFNI CGCG 2 cut(s) 1433, 1479
BspHI TCATGA 1 cut(s) 1753
BspLI GGNNCC 6 cut(s) 74, 1213, 1429, 1459, 2143, 2156
BspOI GCTAGC 1 cut(s) 2522
BspT104I TTCGAA 1 cut(s) 106
BspT107I GGYRCC 3 cut(s) 72, 1457, 2141
BspTNI GGTCTC 2 cut(s) 1920, 2935
BsrDI GCAATG 1 cut(s) 1011
BsrFI RCCGGY 1 cut(s) 2470
BsrGI TGTACA 1 cut(s) 2332
BsrI ACTGG 9 cut(s) 369, 726, 986, 1215, 1409, 1651, 2219, 2434, 3082
BssAI RCCGGY 1 cut(s) 2470
BssMI GATC 4 cut(s) 148, 1750, 2164, 2977
BssT1I CCWWGG 6 cut(s) 604, 1423, 1845, 1893, 1962, 2259
Bst2UI CCWGG 2 cut(s) 1912, 2316
Bst4CI ACNGT 9 cut(s) 95, 254, 565, 625, 1111, 1675, 2332, 2766, 2830
Bst6I CTCTTC 3 cut(s) 1038, 1845, 2518
BstAUI TGTACA 1 cut(s) 2332
BstBI TTCGAA 1 cut(s) 106
BstC8I GCNNGC 1 cut(s) 2520
BstDEI CTNAG 7 cut(s) 332, 429, 937, 960, 1271, 1764, 2106
BstDSI CCRYGG 3 cut(s) 604, 1423, 1893
BstEII GGTNACC 1 cut(s) 1646
BstFNI CGCG 2 cut(s) 1433, 1479
BstHHI GCGC 2 cut(s) 695, 1479
BstKTI GATC 4 cut(s) 151, 1753, 2167, 2980
BstMAI GTCTC 4 cut(s) 803, 1920, 2321, 2935
BstMBI GATC 4 cut(s) 148, 1750, 2164, 2977
BstMWI GCNNNNNNNGC 5 cut(s) 715, 761, 1576, 2298, 3053
BstNI CCWGG 2 cut(s) 1912, 2316
BstNSI RCATGY 1 cut(s) 557
BstPI GGTNACC 1 cut(s) 1646
BstSCI CCNGG 4 cut(s) 223, 1306, 1910, 2314
BstSFI CTRYAG 5 cut(s) 737, 1602, 2456, 2648, 2750
BstUI CGCG 2 cut(s) 1433, 1479
BstV1I GCAGC 8 cut(s) 514, 1189, 2263, 2384, 2486, 2678, 2928, 3065
BstV2I GAAGAC 1 cut(s) 375
BstXI CCANNNNNNTGG 1 cut(s) 3089
BsuRI GGCC 2 cut(s) 31, 246
BtgI CCRYGG 3 cut(s) 604, 1423, 1893
BtgZI GCGATG 5 cut(s) 2361, 2463, 2465, 2655, 2757
BtrI CACGTC 1 cut(s) 1234
BtsIMutI CAGTG 2 cut(s) 1658, 1680
Cac8I GCNNGC 1 cut(s) 2520
CaiI CAGNNNCTG 2 cut(s) 2276, 2330
CciI TCATGA 1 cut(s) 1753
CfoI GCGC 2 cut(s) 695, 1479
Cfr10I RCCGGY 1 cut(s) 2470
Cfr13I GGNCC 4 cut(s) 30, 245, 499, 1481
CseI GACGC 1 cut(s) 1422
DdeI CTNAG 7 cut(s) 332, 429, 937, 960, 1271, 1764, 2106
DpnI GATC 4 cut(s) 150, 1752, 2166, 2979
DpnII GATC 4 cut(s) 148, 1750, 2164, 2977
DraI TTTAAA 4 cut(s) 408, 618, 645, 2208
Eam1104I CTCTTC 3 cut(s) 1038, 1845, 2518
EarI CTCTTC 3 cut(s) 1038, 1845, 2518
EciI GGCGGA 1 cut(s) 475
Ecl136II GAGCTC 1 cut(s) 3068
Eco130I CCWWGG 6 cut(s) 604, 1423, 1845, 1893, 1962, 2259
Eco24I GRGCYC 1 cut(s) 3070
Eco31I GGTCTC 2 cut(s) 1920, 2935
Eco32I GATATC 1 cut(s) 1149
Eco47I GGWCC 2 cut(s) 499, 1481
Eco53kI GAGCTC 1 cut(s) 3068
Eco57I CTGAAG 6 cut(s) 810, 858, 897, 1458, 2946, 2958
Eco91I GGTNACC 1 cut(s) 1646
EcoICRI GAGCTC 1 cut(s) 3068
EcoO109I RGGNCCY 1 cut(s) 30
EcoO65I GGTNACC 1 cut(s) 1646
EcoRII CCWGG 2 cut(s) 1910, 2314
EcoRV GATATC 1 cut(s) 1149
EcoT14I CCWWGG 6 cut(s) 604, 1423, 1845, 1893, 1962, 2259
EcoT38I GRGCYC 1 cut(s) 3070
ErhI CCWWGG 6 cut(s) 604, 1423, 1845, 1893, 1962, 2259
FalI AAGNNNNNCTT 4 cut(s) 933, 965, 1164, 1196
FaqI GGGAC 4 cut(s) 115, 818, 2590, 3042
FbaI TGATCA 1 cut(s) 1750
FblI GTMKAC 2 cut(s) 659, 1303
FriOI GRGCYC 1 cut(s) 3070
GlaI GCGC 2 cut(s) 694, 1478
GsaI CCCAGC 5 cut(s) 136, 1948, 2154, 2384, 2860
GsuI CTGGAG 1 cut(s) 1431
HaeIII GGCC 2 cut(s) 31, 246
HapII CCGG 4 cut(s) 224, 1307, 2471, 2596
HgaI GACGC 1 cut(s) 1422
HhaI GCGC 2 cut(s) 695, 1479
Hin6I GCGC 2 cut(s) 693, 1477
HinP1I GCGC 2 cut(s) 693, 1477
HincII GTYRAC 4 cut(s) 537, 633, 1402, 1683
HindII GTYRAC 4 cut(s) 537, 633, 1402, 1683
HindIII AAGCTT 4 cut(s) 879, 2389, 2581, 2683
HpaI GTTAAC 1 cut(s) 1683
HpaII CCGG 4 cut(s) 224, 1307, 2471, 2596
HphI GGTGA 6 cut(s) 530, 1073, 1658, 1769, 1823, 2259
Hpy188I TCNGA 6 cut(s) 148, 1438, 2307, 2326, 2362, 2977
Hpy99I CGWCG 2 cut(s) 69, 128
HpyAV CCTTC 6 cut(s) 63, 253, 1123, 1278, 1507, 2958
HpyCH4III ACNGT 9 cut(s) 95, 254, 565, 625, 1111, 1675, 2332, 2766, 2830
HpyCH4IV ACGT 2 cut(s) 89, 1233
HpyF10VI GCNNNNNNNGC 5 cut(s) 715, 761, 1576, 2298, 3053
HpyF3I CTNAG 7 cut(s) 332, 429, 937, 960, 1271, 1764, 2106
HpySE526I ACGT 2 cut(s) 89, 1233
HspAI GCGC 2 cut(s) 693, 1477
Kpn2I TCCGGA 1 cut(s) 2595
KpnI GGTACC 1 cut(s) 2145
Ksp22I TGATCA 1 cut(s) 1750
KspAI GTTAAC 1 cut(s) 1683
Kzo9I GATC 4 cut(s) 148, 1750, 2164, 2977
LmnI GCTCC 3 cut(s) 797, 1412, 2154
Lsp1109I GCAGC 8 cut(s) 514, 1189, 2263, 2384, 2486, 2678, 2928, 3065
MaeII ACGT 2 cut(s) 89, 1233
MalI GATC 4 cut(s) 150, 1752, 2166, 2979
MboI GATC 4 cut(s) 148, 1750, 2164, 2977
MfeI CAATTG 1 cut(s) 3087
MhlI GDGCHC 1 cut(s) 3070
MlyI GAGTC 6 cut(s) 137, 665, 736, 1331, 2899, 3024
MmeI TCCRAC 1 cut(s) 775
MroI TCCGGA 1 cut(s) 2595
MroXI GAANNNNTTC 2 cut(s) 390, 1984
MslI CAYNNNNRTG 1 cut(s) 1026
MspA1I CMGCKG 2 cut(s) 84, 2903
MspI CCGG 4 cut(s) 224, 1307, 2471, 2596
MspR9I CCNGG 4 cut(s) 225, 1308, 1912, 2316
MunI CAATTG 1 cut(s) 3087
Mva1269I GAATGC 2 cut(s) 2452, 2553
MvaI CCWGG 2 cut(s) 1912, 2316
MvnI CGCG 2 cut(s) 1433, 1479
MwoI GCNNNNNNNGC 5 cut(s) 715, 761, 1576, 2298, 3053
NciI CCSGG 2 cut(s) 225, 1308
NcoI CCATGG 3 cut(s) 604, 1423, 1893
NdeII GATC 4 cut(s) 148, 1750, 2164, 2977
NheI GCTAGC 1 cut(s) 2518
NlaIV GGNNCC 6 cut(s) 74, 1213, 1429, 1459, 2143, 2156
NmeAIII GCCGAG 1 cut(s) 781
NmuCI GTSAC 9 cut(s) 565, 992, 1061, 1334, 1646, 1775, 2011, 2534, 2726
NspI RCATGY 1 cut(s) 557
NspV TTCGAA 1 cut(s) 106
PagI TCATGA 1 cut(s) 1753
PciI ACATGT 1 cut(s) 553
PcsI WCGNNNNNNNCGW 1 cut(s) 1531
PctI GAATGC 2 cut(s) 2452, 2553
PdmI GAANNNNTTC 2 cut(s) 390, 1984
PfeI GAWTC 7 cut(s) 194, 578, 725, 1980, 2567, 2746, 2879
PflMI CCANNNNNTGG 1 cut(s) 1963
PleI GAGTC 6 cut(s) 136, 664, 736, 1331, 2898, 3024
PpsI GAGTC 6 cut(s) 136, 664, 736, 1331, 2898, 3024
PscI ACATGT 1 cut(s) 553
Psp124BI GAGCTC 1 cut(s) 3070
Psp6I CCWGG 2 cut(s) 1910, 2314
PspEI GGTNACC 1 cut(s) 1646
PspFI CCCAGC 5 cut(s) 132, 1944, 2150, 2380, 2856
PspGI CCWGG 2 cut(s) 1910, 2314
PspN4I GGNNCC 6 cut(s) 74, 1213, 1429, 1459, 2143, 2156
PspPI GGNCC 4 cut(s) 30, 245, 499, 1481
PsrI GAACNNNNNNTAC 2 cut(s) 79, 111
PstNI CAGNNNCTG 2 cut(s) 2276, 2330
PvuII CAGCTG 1 cut(s) 2903
RseI CAYNNNNRTG 1 cut(s) 1026
SacI GAGCTC 1 cut(s) 3070
Sau3AI GATC 4 cut(s) 148, 1750, 2164, 2977
Sau96I GGNCC 4 cut(s) 30, 245, 499, 1481
ScaI AGTACT 2 cut(s) 948, 1116
SchI GAGTC 6 cut(s) 137, 665, 736, 1331, 2899, 3024
ScrFI CCNGG 4 cut(s) 225, 1308, 1912, 2316
SduI GDGCHC 1 cut(s) 3070
SfcI CTRYAG 5 cut(s) 737, 1602, 2456, 2648, 2750
SfuI TTCGAA 1 cut(s) 106
SinI GGWCC 2 cut(s) 499, 1481
SmiMI CAYNNNNRTG 1 cut(s) 1026
SmlI CTYRAG 4 cut(s) 162, 573, 2737, 3105
SmoI CTYRAG 4 cut(s) 162, 573, 2737, 3105
SpeI ACTAGT 2 cut(s) 2612, 2714
SspI AATATT 2 cut(s) 111, 391
SstI GAGCTC 1 cut(s) 3070
StyD4I CCNGG 4 cut(s) 223, 1306, 1910, 2314
StyI CCWWGG 6 cut(s) 604, 1423, 1845, 1893, 1962, 2259
TaaI ACNGT 9 cut(s) 95, 254, 565, 625, 1111, 1675, 2332, 2766, 2830
TaiI ACGT 2 cut(s) 92, 1236
TaqI TCGA 9 cut(s) 18, 67, 106, 123, 175, 301, 1384, 2799, 3111
TatI WGTACW 4 cut(s) 946, 1114, 2332, 2825
TauI GCSGC 3 cut(s) 491, 1617, 1806
TfiI GAWTC 7 cut(s) 194, 578, 725, 1980, 2567, 2746, 2879
TscAI CASTG 2 cut(s) 1658, 1680
TseFI GTSAC 9 cut(s) 565, 992, 1061, 1334, 1646, 1775, 2011, 2534, 2726
TseI GCWGC 8 cut(s) 527, 1177, 2276, 2372, 2474, 2666, 2941, 3053
Tsp45I GTSAC 9 cut(s) 565, 992, 1061, 1334, 1646, 1775, 2011, 2534, 2726
TspDTI ATGAA 7 cut(s) 600, 1209, 1388, 1742, 2081, 3006, 3092
TspGWI ACGGA 4 cut(s) 992, 1644, 1729, 2030
TspRI CASTG 2 cut(s) 1658, 1680
Van91I CCANNNNNTGG 1 cut(s) 1963
VpaK11BI GGWCC 2 cut(s) 499, 1481
XapI RAATTY 6 cut(s) 1053, 1706, 2191, 2242, 2917, 3013
XceI RCATGY 1 cut(s) 557
XcmI CCANNNNNNNNNTGG 4 cut(s) 509, 1028, 1222, 2636
XmiI GTMKAC 2 cut(s) 659, 1303
XmnI GAANNNNTTC 2 cut(s) 390, 1984
ZrmI AGTACT 2 cut(s) 948, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.