Rh2BG085400

Zinc finger CCCH domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
6656831 .. 6661025
4195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG085400.1

Sequence Viewer

Length: 2841 bp
ATGGAGGAGCCCCAAATTGAAAAAGAAAAACCCTCCGAAACCCTAATCTCTCTCCCTCCTCACCGTCGACGAAGCCTCAAGAGCGAAACGCACCGTACTCTGCTTCGAATTCTATCTCACTGCTACGACGTGTTGCAGCACTCAGACCAAAATGTACCTCCGGAGCTCAATCAAGATAATGGGAGTAATGAATTGGGGGAAGCAACTGCAAAAGAAGGAGGTGGGAATGTTGAATTGGTTGAGCCTGATAGTAGGAAGTGCGATGATTCGGCAGCTCAACAGGAATTGGTGGCTGTTGAGAGGTGTGATGGTAAGGGTTTACGAGAGAGAATTGAGCAGATAGAGGATTTCTTCAGTGAGGAAGGAAATGAGGAGTTGTCGGGACAGATGGACTTCGAAGATACGTTTGGGATTAATTTTGGAGATTTGGAGTTTGGTCCTGAGGAAATGCTGATGGATGAACTGGAGCAAATTGTGAAAGGAAATGATGACAATGCTCCTAAACTGTCAACCGGATCATTGGTTGAAAATGAGGGTGCAAACGATAAGTTTGAGTTGCTGAGTAACCAAGAACAACGTGATGACTCTCAACATAATGCTACAGTCAGACCGGAAAATGCAGATCAAGTTGTGATTTGTGAAATTCATAATGAAGGAGAGTGTAATGAATGCACGCATACCTTGTTGAAGACTAGCGCGTTGGATGTAGAGCCGATAATCCAACAGAAAGCAATGGAGACTTCTGTGTCTTCTGGTAGCGCAGAGGAATCTCTTATTCCCATTACTGAAGTTGCACAGTTTGAGGTGCCAGAACACTTCAGCCAAAAGGTGCCTAAAGCCTTTGTTTTCCCTTTGGACACAGATATGGTTGGCGATGCTTCAAAACCTAGTCAGAGCAAAAGCTGGTCACATAAAGCTGATGATTTGGAAGGAGAGCATGAAATTCAGCCAAACGAAAACAAAATGGAAATGGTTTGCACCGGAAATGCTGTGAATTGTCCCAACCATATGAATGATGGAGATATGGAAGAGGGAGAAATCTCTGATGATGATGGGATGGATGATAGATCAACCAATATGCTTTTGCATGATACAGCAAGGTGTGAGGAAAATAAGGTTAATGAATTTCAAATAGTCAAAGATGTCAACGGTCAAAAAGAGCACTCTGGCAAGGAAGCAATTGGTAGAGAATTTGACTCCAATTCCTTTCTGATGAGTATTGCTGACAATGTCCAAAATCCTAGAGGAGTGGAACTCAGAGAAAGTAAAACTAAGCTGATTGGTAGACCTGGAGTTGTCCAGGGGAAAACTATGGAAGCTATAAAGGAAAATGGATATGATCCTTCGCTAGAAAGTCGAAGAATCGAAGAGAAAGATAGCGGAATTGGGAGGGGTATTGGCTTTCAAGAAGCTTGTACTAATAATCAAGCATCGCATGAAAAAATCTCACAGAACTATGAAGCTGGAAGCTGTGGAACCACATCTGAAGATAAGGTGGATGCTGGTGCCGCAAATAAAAGAAAGCGTGGTCCTCCTTCAAAGGAAAAGAAACAAAGAAAGAAGGCAAAAGAACGATTGAAGCGAGCAGAGATGAACAGAAAACTAGGTGTTAAAAGGCTGAAACTGCATTCCATAGAGAAACCAAAGACTGTAGTATATTGCCGCCATTATATTGCTGGCAGGTGCCATGAGGGTGACAAGTGCAAATTTTCACATGATACAGTGCCTTTAACAAAATCCAAGCCCTGTTGTTATTTTTCACGCCAGTCATGCATGAAAGGGGATGACTGCCCATTTGATCATCAGCTTTCTAAGTATCCCTGTGACAATTTTGTTAATAATGGCTCCTGCATCAGAGGTGATCGGTGTCTGTTTTCACACAAGATTCTATCCAAGGAAGAAGGTGCAACTGCTGCTAGCAAACCTGAATTGGTGTCTCCCACCGTGCGGGGTAATTCCAGGTCTGCACAAGTAAAGATTGGTAGTCCCTCCCAGAAGAATTCCCATGCATTGCCCCACTCCACAGGGACTCATTCTCACAATAATACTGAACTGATTATGGCAAGGACTCTATTGGAACAACCTGCAATGGCTACTAAAGGATTTAGCTTCCTTTCTACAGGGAAATCATCATTGGTTCATTCTAGTATGTCCAAGCAAGGAGTGTTGGCCCCAGATAGGAGTACTGGTGCCAAAGCTGGGAACCCGATGCAACAAAGTCCATCAAGTTTGGTTCCAAATACCAAAGAGAATATAATGACAACTCCACCGGTAGTCACTCCCAAAGGGATAAACTTTTTATCATTTGGAAAAGCGTCACCAGATGGTTCCAGTGGCAAAAACCAAGACCATCACCATTCAAACCGAAGTGTGTCAGAGACTGTTCAAAACTTTAATGGGGTGCCAAAGGTTATTCAACCTGCACAACCAAAGGCAGCAGACTTCCTATCTGTTGGGAAAGCTCCCGTAGCTAATTCTAGTAGTGGAAACCCCTTTAGCTTAACTTCAAGTTCAGATAATGGTAACAGTAGGCATTTTGGTGAGGGTAAAAGTGCATTTGATAAACCCCAAAACTCAAGTGCAATCTCATCAAGGCTGCAACCTTCTCCACTTACTTCAGGTCAATCTTCATATTATACAGCATCCAGGTTTAAAGACCCGGTGACTCAGAGGTCACTTTTTTCGACACTTGCATTTGCAGAAAAGTATGAATCAAAAAAGACGAATCAGTCAATTGGTTCTACTTTTACACAGGTTGATAGGGAGACCAAGCAGAATGACTCGGGAAAAGCTTTTAATATTTTGGATTTCTTGTCCACTATTGGCAGTACAACCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

946

Amino Acids

103.91

Weight (kDa)

5.69

Isoelectric Point (pI)

48.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1671
AasI GACNNNNNNGTC 3 cut(s) 745, 2671, 2728
Acc36I ACCTGC 3 cut(s) 1671, 2092, 2428
AccB1I GGYRCC 6 cut(s) 805, 829, 1505, 1683, 2189, 2401
AccI GTMKAC 2 cut(s) 67, 1285
AccII CGCG 1 cut(s) 698
AccIII TCCGGA 1 cut(s) 160
AciI CCGC 4 cut(s) 1380, 1509, 1663, 1948
AclWI GGATC 2 cut(s) 523, 1334
AcsI RAATTY 7 cut(s) 108, 642, 942, 1124, 1190, 1706, 1999
AcuI CTGAAG 5 cut(s) 337, 802, 807, 1506, 2601
AfaI GTAC 5 cut(s) 97, 156, 1417, 2185, 2830
AfiI CCNNNNNNNGG 3 cut(s) 1947, 2178, 2199
AflIII ACRYGT 1 cut(s) 129
AgeI ACCGGT 1 cut(s) 2269
AjiI CACGTC 1 cut(s) 130
AjnI CCWGG 4 cut(s) 1288, 1299, 1958, 2645
AjuI GAANNNNNNNTTGG 6 cut(s) 218, 250, 390, 422, 2117, 2149
Alw21I GWGCWC 2 cut(s) 168, 1164
Alw26I GTCTC 4 cut(s) 731, 1941, 2372, 2759
AlwI GGATC 2 cut(s) 523, 1334
AlwNI CAGNNNCTG 1 cut(s) 2381
Ama87I CYCGRG 1 cut(s) 2782
Aor13HI TCCGGA 1 cut(s) 160
AoxI GGCC 1 cut(s) 2169
ApeKI GCWGC 5 cut(s) 136, 272, 1913, 2435, 2596
ApoI RAATTY 7 cut(s) 108, 642, 942, 1124, 1190, 1706, 1999
ArsI GACNNNNNNTTYG 2 cut(s) 1778, 1810
AseI ATTAAT 1 cut(s) 414
AsiGI ACCGGT 1 cut(s) 2269
AspLEI GCGC 2 cut(s) 698, 761
AspS9I GGNCC 3 cut(s) 437, 1529, 2170
AsuC2I CCSGG 1 cut(s) 2660
AsuHPI GGTGA 7 cut(s) 53, 1706, 1871, 2310, 2345, 2552, 2674
AsuII TTCGAA 2 cut(s) 106, 396
AsuNHI GCTAGC 1 cut(s) 1916
AvaI CYCGRG 1 cut(s) 2782
AvaII GGWCC 2 cut(s) 437, 1529
AxyI CCTNAGG 1 cut(s) 441
BanI GGYRCC 6 cut(s) 805, 829, 1505, 1683, 2189, 2401
BanII GRGCYC 2 cut(s) 12, 168
BbsI GAAGAC 2 cut(s) 695, 741
Bbv12I GWGCWC 2 cut(s) 168, 1164
BbvI GCAGC 5 cut(s) 148, 284, 1900, 2447, 2583
BccI CCATC 9 cut(s) 302, 382, 448, 1010, 1046, 1051, 2230, 2318, 2358
BciT130I CCWGG 4 cut(s) 1290, 1301, 1960, 2647
BciVI GTATCC 1 cut(s) 1827
BclI TGATCA 1 cut(s) 1798
BcnI CCSGG 1 cut(s) 2660
BcoDI GTCTC 4 cut(s) 731, 1941, 2372, 2759
BfaI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2145, 2478
BfmI CTRYAG 3 cut(s) 600, 1650, 2118
BfuAI ACCTGC 3 cut(s) 1671, 2092, 2428
BfuI GTATCC 1 cut(s) 1827
BisI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2436, 2597
BlsI GCNGC 7 cut(s) 138, 274, 1510, 1664, 1915, 2437, 2598
BmcAI AGTACT 1 cut(s) 2185
Bme1390I CCNGG 5 cut(s) 1290, 1301, 1960, 2647, 2660
Bme18I GGWCC 2 cut(s) 437, 1529
BmeT110I CYCGRG 1 cut(s) 2782
BmgBI CACGTC 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 437, 1529, 2170
BmrFI CCNGG 5 cut(s) 1290, 1301, 1960, 2647, 2660
BmsI GCATC 6 cut(s) 865, 1439, 1489, 1860, 2199, 2651
BmtI GCTAGC 1 cut(s) 1920
BpiI GAAGAC 2 cut(s) 695, 741
BplI GAGNNNNNCTC 2 cut(s) 1239, 1271
BpmI CTGGAG 2 cut(s) 485, 1311
Bpu14I TTCGAA 2 cut(s) 106, 396
BpuEI CTTGAG 2 cut(s) 62, 2560
BpuMI CCSGG 1 cut(s) 2660
BsaI GGTCTC 1 cut(s) 2759
BsaJI CCNNGG 2 cut(s) 1300, 1893
BsaWI WCCGGW 5 cut(s) 160, 512, 610, 980, 2269
BsaXI ACNNNNNCTCC 2 cut(s) 2173, 2203
Bsc4I CCNNNNNNNGG 3 cut(s) 1947, 2178, 2199
Bse118I RCCGGY 1 cut(s) 2269
Bse1I ACTGG 4 cut(s) 468, 1765, 2191, 2331
Bse21I CCTNAGG 1 cut(s) 441
Bse3DI GCAATG 3 cut(s) 738, 2009, 2094
BseAI TCCGGA 1 cut(s) 160
BseBI CCWGG 4 cut(s) 1290, 1301, 1960, 2647
BseDI CCNNGG 2 cut(s) 1300, 1893
BseGI GGATG 7 cut(s) 463, 709, 1062, 1066, 1504, 1789, 2642
BseLI CCNNNNNNNGG 3 cut(s) 1947, 2178, 2199
BseMI GCAATG 3 cut(s) 738, 2009, 2094
BseMII CTCAG 5 cut(s) 156, 432, 551, 1270, 2681
BseNI ACTGG 4 cut(s) 468, 1765, 2191, 2331
BseRI GAGGAG 4 cut(s) 20, 48, 386, 1260
BseXI GCAGC 5 cut(s) 148, 284, 1900, 2447, 2583
BseYI CCCAGC 1 cut(s) 2198
BsgI GTGCAG 2 cut(s) 1950, 2406
Bsh1236I CGCG 1 cut(s) 698
BshFI GGCC 1 cut(s) 2171
BshNI GGYRCC 6 cut(s) 805, 829, 1505, 1683, 2189, 2401
BshTI ACCGGT 1 cut(s) 2269
BsiHKAI GWGCWC 2 cut(s) 168, 1164
BsiHKCI CYCGRG 1 cut(s) 2782
BsiSI CCGG 6 cut(s) 161, 513, 611, 981, 2270, 2660
BslFI GGGAC 4 cut(s) 396, 984, 1971, 2041
BslI CCNNNNNNNGG 3 cut(s) 1947, 2178, 2199
BsmAI GTCTC 4 cut(s) 731, 1941, 2372, 2759
BsmFI GGGAC 4 cut(s) 396, 984, 1971, 2041
BsmI GAATGC 2 cut(s) 674, 1627
BsnI GGCC 1 cut(s) 2171
Bso31I GGTCTC 1 cut(s) 2759
BsoBI CYCGRG 1 cut(s) 2782
Bsp119I TTCGAA 2 cut(s) 106, 396
Bsp1286I GDGCHC 3 cut(s) 12, 168, 1164
Bsp13I TCCGGA 1 cut(s) 160
Bsp143I GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
BspACI CCGC 4 cut(s) 1380, 1509, 1663, 1948
BspANI GGCC 1 cut(s) 2171
BspCNI CTCAG 5 cut(s) 155, 433, 552, 1269, 2680
BspEI TCCGGA 1 cut(s) 160
BspFNI CGCG 1 cut(s) 698
BspMI ACCTGC 3 cut(s) 1671, 2092, 2428
BspOI GCTAGC 1 cut(s) 1920
BspPI GGATC 2 cut(s) 523, 1334
BspT104I TTCGAA 2 cut(s) 106, 396
BspT107I GGYRCC 6 cut(s) 805, 829, 1505, 1683, 2189, 2401
BspTNI GGTCTC 1 cut(s) 2759
BsrDI GCAATG 3 cut(s) 738, 2009, 2094
BsrFI RCCGGY 1 cut(s) 2269
BsrI ACTGG 4 cut(s) 468, 1765, 2191, 2331
BssAI RCCGGY 1 cut(s) 2269
BssECI CCNNGG 2 cut(s) 1300, 1893
BssMI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
BssT1I CCWWGG 1 cut(s) 1893
Bst2UI CCWGG 4 cut(s) 1290, 1301, 1960, 2647
Bst6I CTCTTC 2 cut(s) 1023, 1362
BstAPI GCANNNNNTGC 1 cut(s) 1913
BstBI TTCGAA 2 cut(s) 106, 396
BstC8I GCNNGC 4 cut(s) 674, 1584, 1678, 1918
BstDEI CTNAG 7 cut(s) 142, 441, 560, 1256, 1272, 1812, 2667
BstF5I GGATG 7 cut(s) 463, 709, 1062, 1066, 1504, 1789, 2642
BstFNI CGCG 1 cut(s) 698
BstHHI GCGC 2 cut(s) 698, 761
BstKTI GATC 6 cut(s) 518, 625, 1070, 1342, 1801, 1864
BstMAI GTCTC 4 cut(s) 731, 1941, 2372, 2759
BstMBI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
BstMWI GCNNNNNNNGC 6 cut(s) 81, 1508, 1624, 1770, 1913, 2468
BstNI CCWGG 4 cut(s) 1290, 1301, 1960, 2647
BstSCI CCNGG 5 cut(s) 1288, 1299, 1958, 2645, 2658
BstSFI CTRYAG 3 cut(s) 600, 1650, 2118
BstUI CGCG 1 cut(s) 698
BstV1I GCAGC 5 cut(s) 148, 284, 1900, 2447, 2583
BstV2I GAAGAC 2 cut(s) 695, 741
Bsu36I CCTNAGG 1 cut(s) 441
BsuI GTATCC 1 cut(s) 1827
BsuRI GGCC 1 cut(s) 2171
BtgZI GCGATG 3 cut(s) 276, 888, 1416
BtrI CACGTC 1 cut(s) 130
BtsCI GGATG 7 cut(s) 463, 709, 1062, 1066, 1504, 1789, 2642
BtsI GCAGTG 1 cut(s) 118
BtsIMutI CAGTG 4 cut(s) 118, 361, 1728, 2338
BveI ACCTGC 3 cut(s) 1671, 2092, 2428
Cac8I GCNNGC 4 cut(s) 674, 1584, 1678, 1918
CaiI CAGNNNCTG 1 cut(s) 2381
CfoI GCGC 2 cut(s) 698, 761
Cfr10I RCCGGY 1 cut(s) 2269
Cfr13I GGNCC 3 cut(s) 437, 1529, 2170
CseI GACGC 1 cut(s) 2304
Csp6I GTAC 5 cut(s) 96, 155, 1416, 2184, 2829
CspAI ACCGGT 1 cut(s) 2269
CviAII CATG 8 cut(s) 938, 1088, 1436, 1688, 1715, 1770, 1774, 2006
CviQI GTAC 5 cut(s) 96, 155, 1416, 2184, 2829
DdeI CTNAG 7 cut(s) 142, 441, 560, 1256, 1272, 1812, 2667
DpnI GATC 6 cut(s) 517, 624, 1069, 1341, 1800, 1863
DpnII GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
DraI TTTAAA 1 cut(s) 2653
DrdI GACNNNNNNGTC 3 cut(s) 745, 2671, 2728
DseDI GACNNNNNNGTC 3 cut(s) 745, 2671, 2728
Eam1104I CTCTTC 2 cut(s) 1023, 1362
EarI CTCTTC 2 cut(s) 1023, 1362
Ecl136II GAGCTC 1 cut(s) 166
Eco130I CCWWGG 1 cut(s) 1893
Eco24I GRGCYC 2 cut(s) 12, 168
Eco31I GGTCTC 1 cut(s) 2759
Eco47I GGWCC 2 cut(s) 437, 1529
Eco53kI GAGCTC 1 cut(s) 166
Eco57I CTGAAG 5 cut(s) 337, 802, 807, 1506, 2601
Eco81I CCTNAGG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 2782
EcoICRI GAGCTC 1 cut(s) 166
EcoRI GAATTC 2 cut(s) 108, 1999
EcoRII CCWGG 4 cut(s) 1288, 1299, 1958, 2645
EcoT14I CCWWGG 1 cut(s) 1893
EcoT22I ATGCAT 2 cut(s) 1775, 2011
EcoT38I GRGCYC 2 cut(s) 12, 168
ErhI CCWWGG 1 cut(s) 1893
FaeI CATG 8 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777, 2009
FaqI GGGAC 4 cut(s) 396, 984, 1971, 2041
FatI CATG 8 cut(s) 937, 1087, 1435, 1687, 1714, 1769, 1773, 2005
FauI CCCGC 1 cut(s) 1941
FauNDI CATATG 1 cut(s) 1008
FbaI TGATCA 1 cut(s) 1798
FblI GTMKAC 2 cut(s) 67, 1285
Fnu4HI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2436, 2597
FokI GGATG 7 cut(s) 470, 716, 1069, 1073, 1511, 1796, 2629
FriOI GRGCYC 2 cut(s) 12, 168
Fsp4HI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2436, 2597
FspBI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2145, 2478
GlaI GCGC 2 cut(s) 697, 760
GluI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2436, 2597
GsaI CCCAGC 1 cut(s) 2202
GsuI CTGGAG 2 cut(s) 485, 1311
HaeIII GGCC 1 cut(s) 2171
HapII CCGG 6 cut(s) 161, 513, 611, 981, 2270, 2660
HgaI GACGC 1 cut(s) 2304
HhaI GCGC 2 cut(s) 698, 761
Hin1II CATG 8 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777, 2009
Hin6I GCGC 2 cut(s) 696, 759
HinP1I GCGC 2 cut(s) 696, 759
HincII GTYRAC 3 cut(s) 68, 510, 1147
HindII GTYRAC 3 cut(s) 68, 510, 1147
HindIII AAGCTT 2 cut(s) 1410, 2790
HpaII CCGG 6 cut(s) 161, 513, 611, 981, 2270, 2660
HphI GGTGA 7 cut(s) 53, 1706, 1871, 2310, 2345, 2552, 2674
Hpy166II GTNNAC 6 cut(s) 68, 320, 510, 1147, 1286, 2817
Hpy188III TCNNGA 7 cut(s) 79, 161, 173, 381, 440, 1406, 2784
Hpy8I GTNNAC 6 cut(s) 68, 320, 510, 1147, 1286, 2817
Hpy99I CGWCG 3 cut(s) 69, 72, 131
HpyAV CCTTC 9 cut(s) 209, 356, 647, 923, 1353, 1545, 1555, 1895, 2613
HpyCH4IV ACGT 3 cut(s) 129, 404, 577
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 1508, 1624, 1770, 1913, 2468
HpyF3I CTNAG 7 cut(s) 142, 441, 560, 1256, 1272, 1812, 2667
HpySE526I ACGT 3 cut(s) 129, 404, 577
Hsp92II CATG 8 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777, 2009
HspAI GCGC 2 cut(s) 696, 759
Kpn2I TCCGGA 1 cut(s) 160
Ksp22I TGATCA 1 cut(s) 1798
Kzo9I GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
LmnI GCTCC 6 cut(s) 7, 163, 466, 502, 1850, 2467
Lsp1109I GCAGC 5 cut(s) 148, 284, 1900, 2447, 2583
LweI GCATC 6 cut(s) 865, 1439, 1489, 1860, 2199, 2651
MaeI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2145, 2478
MaeII ACGT 3 cut(s) 129, 404, 577
MaeIII GTNAC 9 cut(s) 563, 906, 1694, 1823, 2275, 2316, 2522, 2662, 2673
MalI GATC 6 cut(s) 517, 624, 1069, 1341, 1800, 1863
MboI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
MfeI CAATTG 2 cut(s) 1179, 2733
MhlI GDGCHC 3 cut(s) 12, 168, 1164
MlyI GAGTC 6 cut(s) 578, 1190, 2023, 2062, 2659, 2774
MmeI TCCRAC 2 cut(s) 681, 745
Mph1103I ATGCAT 2 cut(s) 1775, 2011
MroI TCCGGA 1 cut(s) 160
MseI TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2394, 2501, 2652, 2796
MslI CAYNNNNRTG 4 cut(s) 863, 1011, 1692, 2538
MspI CCGG 6 cut(s) 161, 513, 611, 981, 2270, 2660
MspR9I CCNGG 5 cut(s) 1290, 1301, 1960, 2647, 2660
MunI CAATTG 2 cut(s) 1179, 2733
Mva1269I GAATGC 2 cut(s) 674, 1627
MvaI CCWGG 4 cut(s) 1290, 1301, 1960, 2647
MvnI CGCG 1 cut(s) 698
MwoI GCNNNNNNNGC 6 cut(s) 81, 1508, 1624, 1770, 1913, 2468
NciI CCSGG 1 cut(s) 2660
NdeI CATATG 1 cut(s) 1008
NdeII GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
NheI GCTAGC 1 cut(s) 1916
NlaIII CATG 8 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777, 2009
NmuCI GTSAC 7 cut(s) 906, 1694, 1823, 2275, 2316, 2662, 2673
NsiI ATGCAT 2 cut(s) 1775, 2011
NspV TTCGAA 2 cut(s) 106, 396
PaqCI CACCTGC 1 cut(s) 1671
PcsI WCGNNNNNNNCGW 1 cut(s) 1579
PctI GAATGC 2 cut(s) 674, 1627
PfeI GAWTC 6 cut(s) 266, 767, 1362, 1885, 2711, 2725
PflFI GACNNNGTC 1 cut(s) 1229
PinAI ACCGGT 1 cut(s) 2269
PkrI GCNGC 7 cut(s) 138, 274, 1510, 1664, 1915, 2437, 2598
PleI GAGTC 6 cut(s) 578, 1190, 2023, 2062, 2659, 2774
PpsI GAGTC 6 cut(s) 578, 1190, 2023, 2062, 2659, 2774
PshBI ATTAAT 1 cut(s) 414
Psp124BI GAGCTC 1 cut(s) 168
Psp6I CCWGG 4 cut(s) 1288, 1299, 1958, 2645
PspFI CCCAGC 1 cut(s) 2198
PspGI CCWGG 4 cut(s) 1288, 1299, 1958, 2645
PspPI GGNCC 3 cut(s) 437, 1529, 2170
PstNI CAGNNNCTG 1 cut(s) 2381
PsyI GACNNNGTC 1 cut(s) 1229
RsaI GTAC 5 cut(s) 97, 156, 1417, 2185, 2830
RsaNI GTAC 5 cut(s) 96, 155, 1416, 2184, 2829
RseI CAYNNNNRTG 4 cut(s) 863, 1011, 1692, 2538
SacI GAGCTC 1 cut(s) 168
SalI GTCGAC 1 cut(s) 66
SaqAI TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2394, 2501, 2652, 2796
SatI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2436, 2597
Sau3AI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
Sau96I GGNCC 3 cut(s) 437, 1529, 2170
ScaI AGTACT 1 cut(s) 2185
SchI GAGTC 6 cut(s) 578, 1190, 2023, 2062, 2659, 2774
ScrFI CCNGG 5 cut(s) 1290, 1301, 1960, 2647, 2660
SduI GDGCHC 3 cut(s) 12, 168, 1164
SfaNI GCATC 6 cut(s) 865, 1439, 1489, 1860, 2199, 2651
SfcI CTRYAG 3 cut(s) 600, 1650, 2118
SfuI TTCGAA 2 cut(s) 106, 396
SgrDI CGTCGACG 1 cut(s) 66
SinI GGWCC 2 cut(s) 437, 1529
SmiMI CAYNNNNRTG 4 cut(s) 863, 1011, 1692, 2538
SmlI CTYRAG 2 cut(s) 77, 2575
SmoI CTYRAG 2 cut(s) 77, 2575
SsiI CCGC 4 cut(s) 1380, 1509, 1663, 1948
SspI AATATT 1 cut(s) 2800
SspMI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2145, 2478
SstI GAGCTC 1 cut(s) 168
StyD4I CCNGG 5 cut(s) 1288, 1299, 1958, 2645, 2658
StyI CCWWGG 1 cut(s) 1893
TaiI ACGT 3 cut(s) 132, 407, 580
TaqI TCGA 6 cut(s) 67, 106, 396, 1357, 1365, 2684
TatI WGTACW 3 cut(s) 1415, 2183, 2828
TauI GCSGC 2 cut(s) 1511, 1665
TfiI GAWTC 6 cut(s) 266, 767, 1362, 1885, 2711, 2725
Tru1I TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2394, 2501, 2652, 2796
Tru9I TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2394, 2501, 2652, 2796
TscAI CASTG 4 cut(s) 125, 361, 1728, 2338
TseFI GTSAC 7 cut(s) 906, 1694, 1823, 2275, 2316, 2662, 2673
TseI GCWGC 5 cut(s) 136, 272, 1913, 2435, 2596
Tsp45I GTSAC 7 cut(s) 906, 1694, 1823, 2275, 2316, 2662, 2673
TspRI CASTG 4 cut(s) 125, 361, 1728, 2338
Tth111I GACNNNGTC 1 cut(s) 1229
VpaK11BI GGWCC 2 cut(s) 437, 1529
VspI ATTAAT 1 cut(s) 414
XapI RAATTY 7 cut(s) 108, 642, 942, 1124, 1190, 1706, 1999
XcmI CCANNNNNNNNNTGG 2 cut(s) 1013, 1673
XmiI GTMKAC 2 cut(s) 67, 1285
XspI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2145, 2478
ZrmI AGTACT 1 cut(s) 2185
Zsp2I ATGCAT 2 cut(s) 1775, 2011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.