RchiOBHm_Chr2g0093651

Zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002000
Physical Location & Seq
Forward (+)
6881734 .. 6886036
4303 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46870

Sequence Viewer

Length: 2781 bp
ATGGAGGAGCCCCAAATTGAAAAAGAAAAACCCTCCGAAACCCTAATCTCTCTCCCTCCTCACCGTCGACGAAGCCTCAAGAGCGAAACGCATCGTACTCTGCTTCGAATTCTATCTCACTGCTACGACGTGTTGCAGCACTCAGACCAAAATGTACCTCCGGAGCTCAATCAAGATAATGGGAGTAATGAATTGGGGGAAGCAACTGCAAAAGAAGGAGGTGGGAATGTTGAATTGGTTGAGCCTGATAGTAGGAAGTGCGATGATTCGGCAGCTCAACCGGAATTGGTGGCTGTTGAGAGGTGTGATGGTAAGGGTTTACGAGAGAGAATTGAGCAGATAGAGGATTTCTTCAGTGAGGAAGGAAATGAGGAGTTGTCAGGACAGATGGACTTCGAAGATACGTTTGGGATTAATTTTGGAGATTTGGAGTTTGGTCCTGAGGAAATGCTGATGGATGAACTGGAGCAAATTGTGAAAGGAAATGATGACAATGCTCCTAAACTGTCAACCGGATCATTGGTTGAAAATGAGGGTGCAAACGATAAGTTTGAGTTGCTGAGTAACCAAGAACAACGTGATGACTCTCAACATAATGCTACAGTCAGACCGGAAAATGCAGATCAAGTTGTGATTGGTGAAATTCATAATGAAGGAGAGTGTAATGAATGCACGCATTCCTTGTTGAAGACTAGCGCGTTGGATGTAGAGCCGATAATCCAACAGAAAGCAATGGAGACTTCTGTGTCTTCTGGTAGTGCAGAGGAATCTCTTATTCCCATTACTGAAGTTGCACAGTTTGAGGTGCCAGAACACTTCAGCCAAAAGGTGCCTGAAGCCTTTGTTTTCCCTTTGGACACAGATATGGTTGGCGATGCTTCAAAGCCTAGTCAGAGCAAAAGCTGGTCACATAAAGCTGATGATTTGGAAGGAGAGCATGAAATTCAGCCAAACGAAAACAAAATGGAAATGGTTTGCACCGGAAATGCTGTGAATTGTCCCAACCATATGAATGATGGAGATATGGAAGAGGGAGAAATCTCTGATGATGATGGGATGGATGATAGATCAACCAATATGCTTTTGCATGATACAGCAAGGTGTGAGGAAAATAAGGTTAATGAATTTCAAATAGTCAAAGATGTCAACGGTCAAAAAGAGCACTCTGGCAAGGAAGCAATTGGTAGAGAATTTGACTCCAATTCCTTTCTGATGAGTATTGCTGACAATGTCCAAAATCCTAGAGGAGTGGAACTCAGAGAAAGTAAAACTAAGCTGATTGGTAGACCTGGAGTTGTCCAGGGGAAAACTATGGAAGCTATAAAGGAAAATGGATATGATCCTTCGCTAGAAAGTCGAAGAATCGAAGAGAAAGATAGCGGAATTGGGAGGGGTATTGGCTTTCAAGAAGCTTGTACTAATAATCAAGCATCGCATGAAAAAATCTCACAGAACTATGAAGCTGGAAGCTGTGGAACCACATCTGAAGATAAGGTGGATGCTGGTGCCGCAAATAAAAGAAAGCGTGGTCCTCCTTCAAAGGAAAAGAAACAAAGAAAGAAGGCAAAAGAACGATTGAAGCGAGCAGAGATGAACAGAAAACTAGGTGTTAAAAGGCTGAAACTGCATTCCATAGAGAAACCAAAGACTGTAGTATATTGCCGCCATTATATTGCTGGAAGGTGCCATGAGGGTGACAAGTGCAAATTTTCACATGATACAGTGCCTTTAACAAAATCCAAGCCCTGTTGTTATTTTTCACGCCAGTCATGCATGAAAGGGGATGACTGCCCATTTGATCATCAGCTTTCTAAGTATCCCTGTGACAATTTTGTTAATAATGGCTCCTGCATCAGAGGTGATCGGTGTCTGTTTTCACACAAGATTTTATCCAAGGAAGAAGGTGCAACTGCTGCTAGCAAACCTGAATTGGTGTCTCCCACCGTGCGGGTGCCCCACTCCACAGGGACTCATTCTCACAATAATACTGAACTGATTATGGCAAGGACTCTATTGGAACAACCTGCAATGGCTACTAAAGGATTTAGCTTCCTTTCTACAGAGAAATCATCATTGGTTCATTCTAGTATGTCCAAGCAAGGAGTGTTGGCCCCAGATGGGAGTACTGGTGCCAAAGCTGGGAACCCGATGCAACAAAGTCCATCAAGTTCAGTTCCAAATACCAAAGAGAATATAATGACAACTCCACCGGTAGTCACTCCCAAAGGGATAAACTTTTTATCATTTGGAAAAGCGTCACCAGATGGTTCCAGTGGCAAAAACCAAGACCATCACCATTCAAACCGAAGTGTGTCAGAGACTGTTCAAAACTTTAATGGGGTGCCAAAGGTTATTCAACCTGCACAACCAAAGGCAGCAGACTTCCTATCTGTTGGGAAAGCTCCCGTAGCTAATTCTAGTAGTGGAAACCCCTTTAGCTTAACTTCAAGTTCAGATAATGGTAACAGTAGGCATTTTGGTGAGGGTAAAAGTGCATTTGATAAACCCCAAAACTCAAGTGCAATCTCATCAAGGCTGCAACCTTCTCCACTTACTTCAGGTCAATCTTCATATTATACAGCATCCAGGTTTAAAGACCCGGTGACTCAGAGGTCACTTTTTTCGACACTTGCATTTGCAGAAAAGTATGAATCAAAAAAGACGAATCATTCAATTGGTTCTACTTTTACACCGGTTGATAGGGAGACCAAGCAGAATGACTCGGGAAAAGCTTTTAATATTTTGGATTTCTTGTCCACTATTGGCAGTACAACCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

926

Amino Acids

101.7

Weight (kDa)

5.46

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 745, 2611
Acc36I ACCTGC 2 cut(s) 2032, 2368
AccB1I GGYRCC 7 cut(s) 805, 829, 1505, 1683, 1951, 2129, 2341
AccI GTMKAC 2 cut(s) 67, 1285
AccII CGCG 1 cut(s) 698
AccIII TCCGGA 1 cut(s) 160
AciI CCGC 4 cut(s) 1380, 1509, 1663, 1948
AclWI GGATC 2 cut(s) 523, 1334
AcsI RAATTY 6 cut(s) 108, 642, 942, 1124, 1190, 1706
AcuI CTGAAG 6 cut(s) 337, 802, 807, 855, 1506, 2541
AfaI GTAC 5 cut(s) 97, 156, 1417, 2125, 2770
AfiI CCNNNNNNNGG 3 cut(s) 1947, 2118, 2139
AflIII ACRYGT 1 cut(s) 129
AgeI ACCGGT 2 cut(s) 2209, 2692
AjiI CACGTC 1 cut(s) 130
AjnI CCWGG 3 cut(s) 1288, 1299, 2585
AjuI GAANNNNNNNTTGG 6 cut(s) 218, 250, 390, 422, 2057, 2089
Alw21I GWGCWC 2 cut(s) 168, 1164
Alw26I GTCTC 4 cut(s) 731, 1941, 2312, 2699
AlwI GGATC 2 cut(s) 523, 1334
AlwNI CAGNNNCTG 1 cut(s) 2321
Ama87I CYCGRG 1 cut(s) 2722
Aor13HI TCCGGA 1 cut(s) 160
AoxI GGCC 1 cut(s) 2109
ApeKI GCWGC 5 cut(s) 136, 272, 1913, 2375, 2536
ApoI RAATTY 6 cut(s) 108, 642, 942, 1124, 1190, 1706
ArsI GACNNNNNNTTYG 2 cut(s) 1778, 1810
AseI ATTAAT 1 cut(s) 414
AsiGI ACCGGT 2 cut(s) 2209, 2692
AspLEI GCGC 1 cut(s) 698
AspS9I GGNCC 3 cut(s) 437, 1529, 2110
AsuC2I CCSGG 1 cut(s) 2600
AsuHPI GGTGA 8 cut(s) 53, 650, 1706, 1871, 2250, 2285, 2492, 2614
AsuII TTCGAA 2 cut(s) 106, 396
AsuNHI GCTAGC 1 cut(s) 1916
AvaI CYCGRG 1 cut(s) 2722
AvaII GGWCC 2 cut(s) 437, 1529
AxyI CCTNAGG 1 cut(s) 441
BaeGI GKGCMC 1 cut(s) 1956
BanI GGYRCC 7 cut(s) 805, 829, 1505, 1683, 1951, 2129, 2341
BanII GRGCYC 2 cut(s) 12, 168
BbsI GAAGAC 2 cut(s) 695, 741
Bbv12I GWGCWC 2 cut(s) 168, 1164
BbvI GCAGC 5 cut(s) 148, 284, 1900, 2387, 2523
BciT130I CCWGG 3 cut(s) 1290, 1301, 2587
BciVI GTATCC 1 cut(s) 1827
BclI TGATCA 1 cut(s) 1798
BcnI CCSGG 1 cut(s) 2600
BcoDI GTCTC 4 cut(s) 731, 1941, 2312, 2699
BfaI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2085, 2418
BfmI CTRYAG 3 cut(s) 600, 1650, 2058
BfuAI ACCTGC 2 cut(s) 2032, 2368
BfuI GTATCC 1 cut(s) 1827
BisI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2376, 2537
BlsI GCNGC 7 cut(s) 138, 274, 1510, 1664, 1915, 2377, 2538
BmcAI AGTACT 1 cut(s) 2125
Bme1390I CCNGG 4 cut(s) 1290, 1301, 2587, 2600
Bme18I GGWCC 2 cut(s) 437, 1529
BmeT110I CYCGRG 1 cut(s) 2722
BmgBI CACGTC 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 437, 1529, 2110
BmrFI CCNGG 4 cut(s) 1290, 1301, 2587, 2600
BmsI GCATC 7 cut(s) 100, 865, 1439, 1489, 1860, 2139, 2591
BmtI GCTAGC 1 cut(s) 1920
BpiI GAAGAC 2 cut(s) 695, 741
BplI GAGNNNNNCTC 2 cut(s) 1239, 1271
BpmI CTGGAG 2 cut(s) 485, 1311
Bpu14I TTCGAA 2 cut(s) 106, 396
BpuEI CTTGAG 2 cut(s) 62, 2500
BpuMI CCSGG 1 cut(s) 2600
BsaI GGTCTC 1 cut(s) 2699
BsaJI CCNNGG 2 cut(s) 1300, 1893
BsaWI WCCGGW 7 cut(s) 160, 280, 512, 610, 980, 2209, 2692
BsaXI ACNNNNNCTCC 2 cut(s) 2113, 2143
Bsc4I CCNNNNNNNGG 3 cut(s) 1947, 2118, 2139
Bse118I RCCGGY 2 cut(s) 2209, 2692
Bse1I ACTGG 4 cut(s) 468, 1765, 2131, 2271
Bse21I CCTNAGG 1 cut(s) 441
Bse3DI GCAATG 2 cut(s) 738, 2034
BseAI TCCGGA 1 cut(s) 160
BseBI CCWGG 3 cut(s) 1290, 1301, 2587
BseDI CCNNGG 2 cut(s) 1300, 1893
BseGI GGATG 7 cut(s) 463, 709, 1062, 1066, 1504, 1789, 2582
BseLI CCNNNNNNNGG 3 cut(s) 1947, 2118, 2139
BseMI GCAATG 2 cut(s) 738, 2034
BseMII CTCAG 5 cut(s) 156, 432, 551, 1270, 2621
BseNI ACTGG 4 cut(s) 468, 1765, 2131, 2271
BseRI GAGGAG 4 cut(s) 20, 48, 386, 1260
BseSI GKGCMC 1 cut(s) 1956
BseXI GCAGC 5 cut(s) 148, 284, 1900, 2387, 2523
BseYI CCCAGC 1 cut(s) 2138
BsgI GTGCAG 2 cut(s) 780, 2346
Bsh1236I CGCG 1 cut(s) 698
BshFI GGCC 1 cut(s) 2111
BshNI GGYRCC 7 cut(s) 805, 829, 1505, 1683, 1951, 2129, 2341
BshTI ACCGGT 2 cut(s) 2209, 2692
BsiHKAI GWGCWC 2 cut(s) 168, 1164
BsiHKCI CYCGRG 1 cut(s) 2722
BsiSI CCGG 8 cut(s) 161, 281, 513, 611, 981, 2210, 2600, 2693
BslFI GGGAC 2 cut(s) 984, 1981
BslI CCNNNNNNNGG 3 cut(s) 1947, 2118, 2139
BsmAI GTCTC 4 cut(s) 731, 1941, 2312, 2699
BsmFI GGGAC 2 cut(s) 984, 1981
BsmI GAATGC 3 cut(s) 674, 676, 1627
BsnI GGCC 1 cut(s) 2111
Bso31I GGTCTC 1 cut(s) 2699
BsoBI CYCGRG 1 cut(s) 2722
Bsp119I TTCGAA 2 cut(s) 106, 396
Bsp1286I GDGCHC 4 cut(s) 12, 168, 1164, 1956
Bsp13I TCCGGA 1 cut(s) 160
Bsp143I GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
BspACI CCGC 4 cut(s) 1380, 1509, 1663, 1948
BspANI GGCC 1 cut(s) 2111
BspCNI CTCAG 5 cut(s) 155, 433, 552, 1269, 2620
BspEI TCCGGA 1 cut(s) 160
BspFNI CGCG 1 cut(s) 698
BspMI ACCTGC 2 cut(s) 2032, 2368
BspOI GCTAGC 1 cut(s) 1920
BspPI GGATC 2 cut(s) 523, 1334
BspT104I TTCGAA 2 cut(s) 106, 396
BspT107I GGYRCC 7 cut(s) 805, 829, 1505, 1683, 1951, 2129, 2341
BspTNI GGTCTC 1 cut(s) 2699
BsrDI GCAATG 2 cut(s) 738, 2034
BsrFI RCCGGY 2 cut(s) 2209, 2692
BsrI ACTGG 4 cut(s) 468, 1765, 2131, 2271
BssAI RCCGGY 2 cut(s) 2209, 2692
BssECI CCNNGG 2 cut(s) 1300, 1893
BssMI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
BssT1I CCWWGG 1 cut(s) 1893
Bst2UI CCWGG 3 cut(s) 1290, 1301, 2587
Bst6I CTCTTC 2 cut(s) 1023, 1362
BstAPI GCANNNNNTGC 1 cut(s) 1913
BstBI TTCGAA 2 cut(s) 106, 396
BstC8I GCNNGC 3 cut(s) 674, 1584, 1918
BstDEI CTNAG 7 cut(s) 142, 441, 560, 1256, 1272, 1812, 2607
BstF5I GGATG 7 cut(s) 463, 709, 1062, 1066, 1504, 1789, 2582
BstFNI CGCG 1 cut(s) 698
BstHHI GCGC 1 cut(s) 698
BstKTI GATC 6 cut(s) 518, 625, 1070, 1342, 1801, 1864
BstMAI GTCTC 4 cut(s) 731, 1941, 2312, 2699
BstMBI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
BstMWI GCNNNNNNNGC 6 cut(s) 81, 1508, 1624, 1770, 1913, 2408
BstNI CCWGG 3 cut(s) 1290, 1301, 2587
BstSCI CCNGG 4 cut(s) 1288, 1299, 2585, 2598
BstSFI CTRYAG 3 cut(s) 600, 1650, 2058
BstSLI GKGCMC 1 cut(s) 1956
BstUI CGCG 1 cut(s) 698
BstV1I GCAGC 5 cut(s) 148, 284, 1900, 2387, 2523
BstV2I GAAGAC 2 cut(s) 695, 741
Bsu36I CCTNAGG 1 cut(s) 441
BsuI GTATCC 1 cut(s) 1827
BsuRI GGCC 1 cut(s) 2111
BtgZI GCGATG 3 cut(s) 276, 888, 1416
BtrI CACGTC 1 cut(s) 130
BtsCI GGATG 7 cut(s) 463, 709, 1062, 1066, 1504, 1789, 2582
BtsI GCAGTG 1 cut(s) 118
BtsIMutI CAGTG 4 cut(s) 118, 361, 1728, 2278
BveI ACCTGC 2 cut(s) 2032, 2368
Cac8I GCNNGC 3 cut(s) 674, 1584, 1918
CaiI CAGNNNCTG 1 cut(s) 2321
CfoI GCGC 1 cut(s) 698
Cfr10I RCCGGY 2 cut(s) 2209, 2692
Cfr13I GGNCC 3 cut(s) 437, 1529, 2110
CseI GACGC 1 cut(s) 2244
Csp6I GTAC 5 cut(s) 96, 155, 1416, 2124, 2769
CspAI ACCGGT 2 cut(s) 2209, 2692
CviAII CATG 7 cut(s) 938, 1088, 1436, 1688, 1715, 1770, 1774
CviQI GTAC 5 cut(s) 96, 155, 1416, 2124, 2769
DdeI CTNAG 7 cut(s) 142, 441, 560, 1256, 1272, 1812, 2607
DpnI GATC 6 cut(s) 517, 624, 1069, 1341, 1800, 1863
DpnII GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
DraI TTTAAA 1 cut(s) 2593
DrdI GACNNNNNNGTC 2 cut(s) 745, 2611
DseDI GACNNNNNNGTC 2 cut(s) 745, 2611
Eam1104I CTCTTC 2 cut(s) 1023, 1362
EarI CTCTTC 2 cut(s) 1023, 1362
Ecl136II GAGCTC 1 cut(s) 166
Eco130I CCWWGG 1 cut(s) 1893
Eco24I GRGCYC 2 cut(s) 12, 168
Eco31I GGTCTC 1 cut(s) 2699
Eco47I GGWCC 2 cut(s) 437, 1529
Eco53kI GAGCTC 1 cut(s) 166
Eco57I CTGAAG 6 cut(s) 337, 802, 807, 855, 1506, 2541
Eco81I CCTNAGG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 2722
EcoICRI GAGCTC 1 cut(s) 166
EcoRI GAATTC 1 cut(s) 108
EcoRII CCWGG 3 cut(s) 1288, 1299, 2585
EcoT14I CCWWGG 1 cut(s) 1893
EcoT22I ATGCAT 1 cut(s) 1775
EcoT38I GRGCYC 2 cut(s) 12, 168
ErhI CCWWGG 1 cut(s) 1893
FaeI CATG 7 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777
FaqI GGGAC 2 cut(s) 984, 1981
FatI CATG 7 cut(s) 937, 1087, 1435, 1687, 1714, 1769, 1773
FauI CCCGC 1 cut(s) 1941
FauNDI CATATG 1 cut(s) 1008
FbaI TGATCA 1 cut(s) 1798
FblI GTMKAC 2 cut(s) 67, 1285
Fnu4HI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2376, 2537
FokI GGATG 7 cut(s) 470, 716, 1069, 1073, 1511, 1796, 2569
FriOI GRGCYC 2 cut(s) 12, 168
Fsp4HI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2376, 2537
FspBI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2085, 2418
GlaI GCGC 1 cut(s) 697
GluI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2376, 2537
GsaI CCCAGC 1 cut(s) 2142
GsuI CTGGAG 2 cut(s) 485, 1311
HaeIII GGCC 1 cut(s) 2111
HapII CCGG 8 cut(s) 161, 281, 513, 611, 981, 2210, 2600, 2693
HgaI GACGC 1 cut(s) 2244
HhaI GCGC 1 cut(s) 698
Hin1II CATG 7 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777
Hin6I GCGC 1 cut(s) 696
HinP1I GCGC 1 cut(s) 696
HincII GTYRAC 3 cut(s) 68, 510, 1147
HindII GTYRAC 3 cut(s) 68, 510, 1147
HindIII AAGCTT 2 cut(s) 1410, 2730
HpaII CCGG 8 cut(s) 161, 281, 513, 611, 981, 2210, 2600, 2693
HphI GGTGA 8 cut(s) 53, 650, 1706, 1871, 2250, 2285, 2492, 2614
Hpy166II GTNNAC 6 cut(s) 68, 320, 510, 1147, 1286, 2757
Hpy188III TCNNGA 7 cut(s) 79, 161, 173, 381, 440, 1406, 2724
Hpy8I GTNNAC 6 cut(s) 68, 320, 510, 1147, 1286, 2757
Hpy99I CGWCG 3 cut(s) 69, 72, 131
HpyCH4IV ACGT 3 cut(s) 129, 404, 577
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 1508, 1624, 1770, 1913, 2408
HpyF3I CTNAG 7 cut(s) 142, 441, 560, 1256, 1272, 1812, 2607
HpySE526I ACGT 3 cut(s) 129, 404, 577
Hsp92II CATG 7 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777
HspAI GCGC 1 cut(s) 696
Kpn2I TCCGGA 1 cut(s) 160
Ksp22I TGATCA 1 cut(s) 1798
Kzo9I GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
LmnI GCTCC 6 cut(s) 7, 163, 466, 502, 1850, 2407
Lsp1109I GCAGC 5 cut(s) 148, 284, 1900, 2387, 2523
LweI GCATC 7 cut(s) 100, 865, 1439, 1489, 1860, 2139, 2591
MaeI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2085, 2418
MaeII ACGT 3 cut(s) 129, 404, 577
MaeIII GTNAC 9 cut(s) 563, 906, 1694, 1823, 2215, 2256, 2462, 2602, 2613
MalI GATC 6 cut(s) 517, 624, 1069, 1341, 1800, 1863
MboI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
MfeI CAATTG 2 cut(s) 1179, 2673
MhlI GDGCHC 4 cut(s) 12, 168, 1164, 1956
MlyI GAGTC 6 cut(s) 578, 1190, 1963, 2002, 2599, 2714
MmeI TCCRAC 2 cut(s) 681, 745
Mph1103I ATGCAT 1 cut(s) 1775
MroI TCCGGA 1 cut(s) 160
MseI TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2334, 2441, 2592, 2736
MslI CAYNNNNRTG 4 cut(s) 863, 1011, 1692, 2478
MspI CCGG 8 cut(s) 161, 281, 513, 611, 981, 2210, 2600, 2693
MspR9I CCNGG 4 cut(s) 1290, 1301, 2587, 2600
MunI CAATTG 2 cut(s) 1179, 2673
Mva1269I GAATGC 3 cut(s) 674, 676, 1627
MvaI CCWGG 3 cut(s) 1290, 1301, 2587
MvnI CGCG 1 cut(s) 698
MwoI GCNNNNNNNGC 6 cut(s) 81, 1508, 1624, 1770, 1913, 2408
NciI CCSGG 1 cut(s) 2600
NdeI CATATG 1 cut(s) 1008
NdeII GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
NheI GCTAGC 1 cut(s) 1916
NlaIII CATG 7 cut(s) 941, 1091, 1439, 1691, 1718, 1773, 1777
NmuCI GTSAC 7 cut(s) 906, 1694, 1823, 2215, 2256, 2602, 2613
NsiI ATGCAT 1 cut(s) 1775
NspV TTCGAA 2 cut(s) 106, 396
PcsI WCGNNNNNNNCGW 1 cut(s) 1579
PctI GAATGC 3 cut(s) 674, 676, 1627
PfeI GAWTC 5 cut(s) 266, 767, 1362, 2651, 2665
PflFI GACNNNGTC 1 cut(s) 1229
PinAI ACCGGT 2 cut(s) 2209, 2692
PkrI GCNGC 7 cut(s) 138, 274, 1510, 1664, 1915, 2377, 2538
PleI GAGTC 6 cut(s) 578, 1190, 1963, 2002, 2599, 2714
PpsI GAGTC 6 cut(s) 578, 1190, 1963, 2002, 2599, 2714
PshBI ATTAAT 1 cut(s) 414
Psp124BI GAGCTC 1 cut(s) 168
Psp6I CCWGG 3 cut(s) 1288, 1299, 2585
PspFI CCCAGC 1 cut(s) 2138
PspGI CCWGG 3 cut(s) 1288, 1299, 2585
PspPI GGNCC 3 cut(s) 437, 1529, 2110
PstNI CAGNNNCTG 1 cut(s) 2321
PsyI GACNNNGTC 1 cut(s) 1229
RsaI GTAC 5 cut(s) 97, 156, 1417, 2125, 2770
RsaNI GTAC 5 cut(s) 96, 155, 1416, 2124, 2769
RseI CAYNNNNRTG 4 cut(s) 863, 1011, 1692, 2478
SacI GAGCTC 1 cut(s) 168
SalI GTCGAC 1 cut(s) 66
SaqAI TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2334, 2441, 2592, 2736
SatI GCNGC 7 cut(s) 137, 273, 1509, 1663, 1914, 2376, 2537
Sau3AI GATC 6 cut(s) 515, 622, 1067, 1339, 1798, 1861
Sau96I GGNCC 3 cut(s) 437, 1529, 2110
ScaI AGTACT 1 cut(s) 2125
SchI GAGTC 6 cut(s) 578, 1190, 1963, 2002, 2599, 2714
ScrFI CCNGG 4 cut(s) 1290, 1301, 2587, 2600
SduI GDGCHC 4 cut(s) 12, 168, 1164, 1956
SfaNI GCATC 7 cut(s) 100, 865, 1439, 1489, 1860, 2139, 2591
SfcI CTRYAG 3 cut(s) 600, 1650, 2058
SfuI TTCGAA 2 cut(s) 106, 396
SgrDI CGTCGACG 1 cut(s) 66
SinI GGWCC 2 cut(s) 437, 1529
SmiMI CAYNNNNRTG 4 cut(s) 863, 1011, 1692, 2478
SmlI CTYRAG 2 cut(s) 77, 2515
SmoI CTYRAG 2 cut(s) 77, 2515
SsiI CCGC 4 cut(s) 1380, 1509, 1663, 1948
SspI AATATT 1 cut(s) 2740
SspMI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2085, 2418
SstI GAGCTC 1 cut(s) 168
StyD4I CCNGG 4 cut(s) 1288, 1299, 2585, 2598
StyI CCWWGG 1 cut(s) 1893
TaiI ACGT 3 cut(s) 132, 407, 580
TaqI TCGA 6 cut(s) 67, 106, 396, 1357, 1365, 2624
TatI WGTACW 3 cut(s) 1415, 2123, 2768
TauI GCSGC 2 cut(s) 1511, 1665
TfiI GAWTC 5 cut(s) 266, 767, 1362, 2651, 2665
Tru1I TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2334, 2441, 2592, 2736
Tru9I TTAA 9 cut(s) 414, 1119, 1611, 1730, 1836, 2334, 2441, 2592, 2736
TscAI CASTG 4 cut(s) 125, 361, 1728, 2278
TseFI GTSAC 7 cut(s) 906, 1694, 1823, 2215, 2256, 2602, 2613
TseI GCWGC 5 cut(s) 136, 272, 1913, 2375, 2536
Tsp45I GTSAC 7 cut(s) 906, 1694, 1823, 2215, 2256, 2602, 2613
TspRI CASTG 4 cut(s) 125, 361, 1728, 2278
Tth111I GACNNNGTC 1 cut(s) 1229
VpaK11BI GGWCC 2 cut(s) 437, 1529
VspI ATTAAT 1 cut(s) 414
XapI RAATTY 6 cut(s) 108, 642, 942, 1124, 1190, 1706
XcmI CCANNNNNNNNNTGG 2 cut(s) 1013, 1673
XmiI GTMKAC 2 cut(s) 67, 1285
XspI CTAG 8 cut(s) 693, 888, 1242, 1349, 1604, 1917, 2085, 2418
ZrmI AGTACT 1 cut(s) 2125
Zsp2I ATGCAT 1 cut(s) 1775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.