Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007991

Physical Location & Seq

Genomic Coordinates Forward (+)

5068981 .. 5071853

Gene Structure 2873 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09450.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCGAATTTTGAGGGGAGGTTTTCGTATTCGTCCTATCCTAAGGTTGAGAAAAGCAATACGCAGTATGCTGATGATGACTTCATCGACGCCGATTGGCCTGTGCACGAAGGCGGAGGCGGTACGGCTTACCCGTCGGCTTCGAAAGCCGAGAAGCAGGATTTTTCGTATCCATTTCCCCCCGAATTCGACAGCTTTGGTGATGGATATGACTCCGGCCAGGAGCAATGTGACTCCGTTGAGAATGGTGGGCCGCCGGAGGTGAACTTGAAGAATGTGTTGACCGGGATGATTGCCATTGTGACTGGCCGGAACAAAGCTGCTCCTGCTGCCGGTGGAGCGCCGGAGCAGCAGCAGGAGCGGCCGACTTCGAATGTTTCATTTCTTGGTGCGAAGAAGAATGGTGATACATACTTGCATTCCTCAGTCTACACGCCCAGTGCGCCGCCGCTTTTTGAGCCGGCTGCGTTTAATTACAGTGCCTACAAGGAGGTTTTGGAGGCTGAACCCCCTGAATGGCTTCCTGATAGTTCCAGTACTGTTTGCATGCAGTGCACTTCTCCTTTCACTGCCTTAACTCGTGGGAGACATCATTGCCGATTCTGTGGCGGGATTTTCTGCAGAGCATGTAGTAAGGGGAGGTGCTTGTTGCCAGTCAAGTTTAGGGAGAGGAATCCGCAGAGGGTCTGCGATGCGTGCTATGACAGGCTAGATCCTTTACAGGGTATTCTTATTAACAGCATTAGCAATGCGGCACAAGCAGCAAGGCATGATGTCATGGATTGGACATGTACAAGAGGATGGTTAAATCTTCCTGTTGGTTTCTCCATGGAGCAAGAGATATACAAAGCAACCAACACATTGAAAAGTTACTCCCAGGTTTCAAGGCTGAATCCGGAGAGGTCCATACCCTTGGCTGTTCTCAAAGGAGCCAAAGGCCTGGCAATCCTAACCGTTGCTAAAGCTGGTGCACTACTTTCTTATAAACTTGGTACTGGTTTGGTGGTTTCTCGAAGGTCAGATGGATCATGGTCTGCTCCATCAGCCATATGTTCTGTTGGCTTAGGATGGGGTGCACAGATTGGGGGCGAGCTCATGGACTTCATCATTGTCCTTCCTGATCTAAAAGCTGTGAAAACTTTTTCTAGTCGCATGCATTTTTCTCTTGGTGCCGGGTGTAGTGCTGCAGCAGGCCCTATTGGTAGAGTGGTAGAAGCAGATATGCGTGCTGGAGACAGGGGTTCTGCAATGTGCTATACATACAGTTGTAGCAAAGGTGCATTTGTAGGAGTATCATTAGAGGGAAACATTGTTGCCACAAGGATGGATACAAATCTTCAATTTTATGGTGACCCTTACCTGACGACTAATGATATACTCCTTGGGACAGTGGAAAGACCAAAGGCTGCGGAGCCCCTGTACGGGGCCCTGCAATCCCTCTACTCAAGTCTACAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001726 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006897 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0008289 GO:0009987 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0022607 GO:0030029 GO:0030036 GO:0030479 GO:0030863 GO:0030864 GO:0031252 GO:0031253 GO:0031256 GO:0031344 GO:0032587 GO:0035091 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044463 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051015 GO:0051017 GO:0051128 GO:0051179 GO:0051234 GO:0051641 GO:0051666 GO:0060491 GO:0061572 GO:0061645 GO:0065007 GO:0071840 GO:0071944 GO:0097435 GO:0098590 GO:0098657 GO:0099568 GO:0120025 GO:0120032 GO:0120035 GO:0120038 GO:1900027

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FYVE Ysc84

Protein Analysis

487

Amino Acids

52.35

Weight (kDa)

5.96

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	172 - 237	4e-21	FYVE zinc finger
Ysc84	PF04366	354 - 479	4.5e-39	Las17-binding protein actin regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43230
fragaria_vesca	FvH4_1g09450 FvH4_1g09450
malus_domestica	MD02G1102900.v1.1 MD15G1224000.v1.1
prunus_persica	Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1
pyrus_communis	pycom02g08060 pycom15g19820
rosa_chinensis	RchiOBHm_Chr2g0096001 RchiOBHm_Chr2g0096261
rosa_laevigata	RLG00000016616 RLG00000016630
rosa_multiflora	Rmu_co8311399.1_g000001 Rmu_sc0002497.1_g000013
rosa_roxburghii	Rroxscaffold_2G00145870
rosa_rugosa	Rorug02G0055800
rosa_samantha	Rh2AG103700 Rh2BG105200 Rh2CG107700 Rh2DG105600
rosa_wichuraiana	Rw2G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	984
AccB1I	GGYRCC	1 cut(s)	1169
AccBSI	CCGCTC	1 cut(s)	361
AccI	GTMKAC	2 cut(s)	429, 1450
AccIII	TCCGGA	1 cut(s)	895
AclWI	GGATC	2 cut(s)	707, 1033
AcoI	YGGCCR	3 cut(s)	217, 307, 362
AcsI	RAATTY	2 cut(s)	7, 185
AcyI	GRCGYC	1 cut(s)	90
AfaI	GTAC	5 cut(s)	124, 538, 793, 994, 1421
AfiI	CCNNNNNNNGG	6 cut(s)	332, 516, 722, 1421, 1422, 1423
AflIII	ACRYGT	1 cut(s)	788
AgsI	TTSAA	4 cut(s)	271, 865, 885, 1340
AjnI	CCWGG	3 cut(s)	219, 876, 939
AluBI	AGCT	5 cut(s)	195, 320, 965, 1093, 1130
AluI	AGCT	5 cut(s)	195, 320, 965, 1093, 1130
Alw21I	GWGCWC	5 cut(s)	108, 557, 973, 1078, 1095
Alw26I	GTCTC	2 cut(s)	580, 1227
Alw44I	GTGCAC	4 cut(s)	104, 553, 969, 1074
AlwI	GGATC	2 cut(s)	707, 1033
Aor13HI	TCCGGA	1 cut(s)	895
AoxI	GGCC	8 cut(s)	98, 217, 251, 307, 362, 937, 1192, 1425
ApaI	GGGCCC	1 cut(s)	1429
ApaLI	GTGCAC	4 cut(s)	104, 553, 969, 1074
ApeKI	GCWGC	9 cut(s)	320, 329, 349, 352, 464, 761, 1184, 1187, 1406
ApoI	RAATTY	2 cut(s)	7, 185
Asp700I	GAANNNNTTC	1 cut(s)	519
AspLEI	GCGC	2 cut(s)	343, 445
AspS9I	GGNCC	5 cut(s)	251, 903, 1193, 1425, 1426
AsuC2I	CCSGG	2 cut(s)	286, 1174
AsuHPI	GGTGA	4 cut(s)	212, 274, 416, 1361
AsuII	TTCGAA	2 cut(s)	143, 371
AvaII	GGWCC	1 cut(s)	903
AxyI	CCTNAGG	1 cut(s)	42
BaeGI	GKGCMC	5 cut(s)	108, 557, 973, 1078, 1429
BanI	GGYRCC	1 cut(s)	1169
BanII	GRGCYC	3 cut(s)	1095, 1416, 1429
BauI	CACGAG	1 cut(s)	579
Bbv12I	GWGCWC	5 cut(s)	108, 557, 973, 1078, 1095
BbvI	GCAGC	9 cut(s)	307, 316, 361, 364, 451, 773, 1171, 1199, 1393
BccI	CCATC	6 cut(s)	197, 795, 1016, 1048, 1062, 1318
BceAI	ACGGC	1 cut(s)	141
BciT130I	CCWGG	3 cut(s)	221, 878, 941
BciVI	GTATCC	2 cut(s)	180, 1321
BcnI	CCSGG	2 cut(s)	286, 1174
BcoDI	GTCTC	2 cut(s)	580, 1227
BfaI	CTAG	3 cut(s)	710, 1146, 1459
BfmI	CTRYAG	3 cut(s)	619, 1185, 1451
BfoI	RGCGCY	1 cut(s)	344
BfuI	GTATCC	2 cut(s)	180, 1321
BmcAI	AGTACT	1 cut(s)	538
Bme1390I	CCNGG	5 cut(s)	221, 286, 878, 941, 1174
Bme18I	GGWCC	1 cut(s)	903
BmgT120I	GGNCC	5 cut(s)	251, 903, 1193, 1425, 1426
BmiI	GGNNCC	5 cut(s)	931, 1171, 1413, 1426, 1427
BmrFI	CCNGG	5 cut(s)	221, 286, 878, 941, 1174
BmrI	ACTGGG	1 cut(s)	432
BmsI	GCATC	1 cut(s)	682
BmuI	ACTGGG	1 cut(s)	432
BpmI	CTGGAG	1 cut(s)	1251
Bpu10I	CCTNAGC	1 cut(s)	1063
Bpu14I	TTCGAA	2 cut(s)	143, 371
BpuEI	CTTGAG	1 cut(s)	1429
BpuMI	CCSGG	2 cut(s)	286, 1174
BsaBI	GATNNNNATC	1 cut(s)	1332
BsaHI	GRCGYC	1 cut(s)	90
BsaJI	CCNNGG	4 cut(s)	828, 876, 912, 1381
BsaWI	WCCGGW	1 cut(s)	895
BsaXI	ACNNNNNCTCC	2 cut(s)	1403, 1433
Bsc4I	CCNNNNNNNGG	6 cut(s)	332, 516, 722, 1421, 1422, 1423
Bse118I	RCCGGY	2 cut(s)	332, 460
Bse1I	ACTGG	5 cut(s)	310, 438, 534, 653, 1000
Bse21I	CCTNAGG	1 cut(s)	42
Bse3DI	GCAATG	4 cut(s)	233, 592, 754, 1254
Bse8I	GATNNNNATC	1 cut(s)	1332
BseAI	TCCGGA	1 cut(s)	895
BseBI	CCWGG	3 cut(s)	221, 878, 941
BseDI	CCNNGG	4 cut(s)	828, 876, 912, 1381
BseGI	GGATG	4 cut(s)	294, 806, 1073, 1329
BseJI	GATNNNNATC	1 cut(s)	1332
BseLI	CCNNNNNNNGG	6 cut(s)	332, 516, 722, 1421, 1422, 1423
BseMI	GCAATG	4 cut(s)	233, 592, 754, 1254
BseMII	CTCAG	1 cut(s)	438
BseNI	ACTGG	5 cut(s)	310, 438, 534, 653, 1000
BseSI	GKGCMC	5 cut(s)	108, 557, 973, 1078, 1429
BseX3I	CGGCCG	1 cut(s)	362
BseXI	GCAGC	9 cut(s)	307, 316, 361, 364, 451, 773, 1171, 1199, 1393
Bsh1285I	CGRYCG	1 cut(s)	365
BshFI	GGCC	8 cut(s)	100, 219, 253, 309, 364, 939, 1194, 1427
BshNI	GGYRCC	1 cut(s)	1169
BsiEI	CGRYCG	1 cut(s)	365
BsiHKAI	GWGCWC	5 cut(s)	108, 557, 973, 1078, 1095
BsiSI	CCGG	9 cut(s)	216, 257, 285, 310, 333, 344, 461, 896, 1173
BslFI	GGGAC	1 cut(s)	1399
BslI	CCNNNNNNNGG	6 cut(s)	332, 516, 722, 1421, 1422, 1423
BsmAI	GTCTC	2 cut(s)	580, 1227
BsmFI	GGGAC	1 cut(s)	1399
BsmI	GAATGC	1 cut(s)	418
BsnI	GGCC	8 cut(s)	100, 219, 253, 309, 364, 939, 1194, 1427
Bsp119I	TTCGAA	2 cut(s)	143, 371
Bsp120I	GGGCCC	1 cut(s)	1425
Bsp1286I	GDGCHC	7 cut(s)	108, 557, 973, 1078, 1095, 1416, 1429
Bsp13I	TCCGGA	1 cut(s)	895
Bsp1407I	TGTACA	1 cut(s)	791
Bsp143I	GATC	3 cut(s)	712, 1025, 1120
Bsp19I	CCATGG	1 cut(s)	828
BspANI	GGCC	8 cut(s)	100, 219, 253, 309, 364, 939, 1194, 1427
BspCNI	CTCAG	1 cut(s)	437
BspEI	TCCGGA	1 cut(s)	895
BspLI	GGNNCC	5 cut(s)	931, 1171, 1413, 1426, 1427
BspMAI	CTGCAG	2 cut(s)	623, 1189
BspPI	GGATC	2 cut(s)	707, 1033
BspT104I	TTCGAA	2 cut(s)	143, 371
BspT107I	GGYRCC	1 cut(s)	1169
BsrBI	CCGCTC	1 cut(s)	361
BsrDI	GCAATG	4 cut(s)	233, 592, 754, 1254
BsrFI	RCCGGY	2 cut(s)	332, 460
BsrGI	TGTACA	1 cut(s)	791
BsrI	ACTGG	5 cut(s)	310, 438, 534, 653, 1000
BssAI	RCCGGY	2 cut(s)	332, 460
BssECI	CCNNGG	4 cut(s)	828, 876, 912, 1381
BssMI	GATC	3 cut(s)	712, 1025, 1120
BssNI	GRCGYC	1 cut(s)	90
BssSI	CACGAG	1 cut(s)	579
BssT1I	CCWWGG	3 cut(s)	828, 912, 1381
Bst2BI	CACGAG	1 cut(s)	579
Bst2UI	CCWGG	3 cut(s)	221, 878, 941
Bst4CI	ACNGT	6 cut(s)	479, 541, 955, 1265, 1390, 1455
BstACI	GRCGYC	1 cut(s)	90
BstAPI	GCANNNNNTGC	1 cut(s)	552
BstAUI	TGTACA	1 cut(s)	791
BstBI	TTCGAA	2 cut(s)	143, 371
BstC8I	GCNNGC	7 cut(s)	462, 548, 697, 1091, 1154, 1192, 1227
BstDEI	CTNAG	3 cut(s)	42, 424, 1063
BstDSI	CCRYGG	1 cut(s)	828
BstEII	GGTNACC	1 cut(s)	1349
BstF5I	GGATG	4 cut(s)	294, 806, 1073, 1329
BstH2I	RGCGCY	1 cut(s)	344
BstHHI	GCGC	2 cut(s)	343, 445
BstKTI	GATC	3 cut(s)	715, 1028, 1123
BstMAI	GTCTC	2 cut(s)	580, 1227
BstMBI	GATC	3 cut(s)	712, 1025, 1120
BstMCI	CGRYCG	1 cut(s)	365
BstNI	CCWGG	3 cut(s)	221, 878, 941
BstNSI	RCATGY	4 cut(s)	550, 630, 792, 1156
BstPI	GGTNACC	1 cut(s)	1349
BstSCI	CCNGG	5 cut(s)	219, 284, 876, 939, 1172
BstSFI	CTRYAG	3 cut(s)	619, 1185, 1451
BstSLI	GKGCMC	5 cut(s)	108, 557, 973, 1078, 1429
BstV1I	GCAGC	9 cut(s)	307, 316, 361, 364, 451, 773, 1171, 1199, 1393
BstX2I	RGATCY	1 cut(s)	712
BstXI	CCANNNNNNTGG	3 cut(s)	913, 940, 1324
BstYI	RGATCY	1 cut(s)	712
BstZI	CGGCCG	1 cut(s)	362
Bsu36I	CCTNAGG	1 cut(s)	42
BsuI	GTATCC	2 cut(s)	180, 1321
BsuRI	GGCC	8 cut(s)	100, 219, 253, 309, 364, 939, 1194, 1427
BtgI	CCRYGG	1 cut(s)	828
BtgZI	GCGATG	1 cut(s)	705
BtsCI	GGATG	4 cut(s)	294, 806, 1073, 1329
BtsI	GCAGTG	2 cut(s)	557, 567
BtsIMutI	CAGTG	5 cut(s)	445, 484, 557, 567, 1395
Cac8I	GCNNGC	7 cut(s)	462, 548, 697, 1091, 1154, 1192, 1227
CfoI	GCGC	2 cut(s)	343, 445
Cfr10I	RCCGGY	2 cut(s)	332, 460
Cfr13I	GGNCC	5 cut(s)	251, 903, 1193, 1425, 1426
CseI	GACGC	1 cut(s)	98
Csp6I	GTAC	5 cut(s)	123, 537, 792, 993, 1420
CviAII	CATG	9 cut(s)	547, 627, 770, 778, 789, 829, 1029, 1096, 1153
CviQI	GTAC	5 cut(s)	123, 537, 792, 993, 1420
DdeI	CTNAG	3 cut(s)	42, 424, 1063
DpnI	GATC	3 cut(s)	714, 1027, 1122
DpnII	GATC	3 cut(s)	712, 1025, 1120
EaeI	YGGCCR	3 cut(s)	217, 307, 362
EagI	CGGCCG	1 cut(s)	362
EciI	GGCGGA	1 cut(s)	129
Ecl136II	GAGCTC	1 cut(s)	1093
EclXI	CGGCCG	1 cut(s)	362
Eco130I	CCWWGG	3 cut(s)	828, 912, 1381
Eco147I	AGGCCT	1 cut(s)	939
Eco24I	GRGCYC	3 cut(s)	1095, 1416, 1429
Eco47I	GGWCC	1 cut(s)	903
Eco52I	CGGCCG	1 cut(s)	362
Eco53kI	GAGCTC	1 cut(s)	1093
Eco81I	CCTNAGG	1 cut(s)	42
Eco91I	GGTNACC	1 cut(s)	1349
EcoICRI	GAGCTC	1 cut(s)	1093
EcoO109I	RGGNCCY	3 cut(s)	1193, 1425, 1426
EcoO65I	GGTNACC	1 cut(s)	1349
EcoRI	GAATTC	1 cut(s)	185
EcoRII	CCWGG	3 cut(s)	219, 876, 939
EcoT14I	CCWWGG	3 cut(s)	828, 912, 1381
EcoT22I	ATGCAT	1 cut(s)	1158
EcoT38I	GRGCYC	3 cut(s)	1095, 1416, 1429
ErhI	CCWWGG	3 cut(s)	828, 912, 1381
FaeI	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
FaqI	GGGAC	1 cut(s)	1399
FatI	CATG	9 cut(s)	546, 626, 769, 777, 788, 828, 1028, 1095, 1152
FauI	CCCGC	1 cut(s)	602
FauNDI	CATATG	1 cut(s)	1049
FblI	GTMKAC	2 cut(s)	429, 1450
FokI	GGATG	4 cut(s)	301, 813, 1080, 1336
FriOI	GRGCYC	3 cut(s)	1095, 1416, 1429
FspBI	CTAG	3 cut(s)	710, 1146, 1459
GlaI	GCGC	2 cut(s)	342, 444
GsuI	CTGGAG	1 cut(s)	1251
HaeII	RGCGCY	1 cut(s)	344
HaeIII	GGCC	8 cut(s)	100, 219, 253, 309, 364, 939, 1194, 1427
HapII	CCGG	9 cut(s)	216, 257, 285, 310, 333, 344, 461, 896, 1173
HgaI	GACGC	1 cut(s)	98
HhaI	GCGC	2 cut(s)	343, 445
Hin1I	GRCGYC	1 cut(s)	90
Hin1II	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
Hin6I	GCGC	2 cut(s)	341, 443
HinP1I	GCGC	2 cut(s)	341, 443
HincII	GTYRAC	1 cut(s)	282
HindII	GTYRAC	1 cut(s)	282
HinfI	GANTC	5 cut(s)	212, 233, 600, 673, 892
HpaII	CCGG	9 cut(s)	216, 257, 285, 310, 333, 344, 461, 896, 1173
HphI	GGTGA	4 cut(s)	212, 274, 416, 1361
Hpy166II	GTNNAC	8 cut(s)	106, 265, 282, 430, 555, 971, 1076, 1451
Hpy188I	TCNGA	1 cut(s)	1021
Hpy188III	TCNNGA	4 cut(s)	524, 896, 1011, 1118
Hpy8I	GTNNAC	8 cut(s)	106, 265, 282, 430, 555, 971, 1076, 1451
Hpy99I	CGWCG	2 cut(s)	92, 139
HpyAV	CCTTC	3 cut(s)	104, 1008, 1124
HpyCH4III	ACNGT	6 cut(s)	479, 541, 955, 1265, 1390, 1455
HpyF3I	CTNAG	3 cut(s)	42, 424, 1063
Hsp92I	GRCGYC	1 cut(s)	90
Hsp92II	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
HspAI	GCGC	2 cut(s)	341, 443
Kpn2I	TCCGGA	1 cut(s)	895
KroI	GCCGGC	1 cut(s)	460
KroNI	GCCGGC	1 cut(s)	462
Kzo9I	GATC	3 cut(s)	712, 1025, 1120
LmnI	GCTCC	9 cut(s)	223, 328, 338, 346, 358, 832, 929, 1042, 1411
Lsp1109I	GCAGC	9 cut(s)	307, 316, 361, 364, 451, 773, 1171, 1199, 1393
LweI	GCATC	1 cut(s)	682
MaeI	CTAG	3 cut(s)	710, 1146, 1459
MaeIII	GTNAC	4 cut(s)	230, 301, 869, 1349
MalI	GATC	3 cut(s)	714, 1027, 1122
MbiI	CCGCTC	1 cut(s)	361
MboI	GATC	3 cut(s)	712, 1025, 1120
MboII	GAAGA	5 cut(s)	283, 406, 409, 803, 1328
MflI	RGATCY	1 cut(s)	712
MhlI	GDGCHC	7 cut(s)	108, 557, 973, 1078, 1095, 1416, 1429
MluCI	AATT	4 cut(s)	7, 185, 472, 1340
MlyI	GAGTC	2 cut(s)	206, 227
Mph1103I	ATGCAT	1 cut(s)	1158
MroI	TCCGGA	1 cut(s)	895
MroNI	GCCGGC	1 cut(s)	460
MroXI	GAANNNNTTC	1 cut(s)	519
MseI	TTAA	4 cut(s)	471, 575, 735, 806
MslI	CAYNNNNRTG	1 cut(s)	1322
MspI	CCGG	9 cut(s)	216, 257, 285, 310, 333, 344, 461, 896, 1173
MspR9I	CCNGG	5 cut(s)	221, 286, 878, 941, 1174
Mva1269I	GAATGC	1 cut(s)	418
MvaI	CCWGG	3 cut(s)	221, 878, 941
NaeI	GCCGGC	1 cut(s)	462
NciI	CCSGG	2 cut(s)	286, 1174
NcoI	CCATGG	1 cut(s)	828
NdeI	CATATG	1 cut(s)	1049
NdeII	GATC	3 cut(s)	712, 1025, 1120
NgoMIV	GCCGGC	1 cut(s)	460
NlaIII	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
NlaIV	GGNNCC	5 cut(s)	931, 1171, 1413, 1426, 1427
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	3 cut(s)	230, 301, 1349
NsiI	ATGCAT	1 cut(s)	1158
NspI	RCATGY	4 cut(s)	550, 630, 792, 1156
NspV	TTCGAA	2 cut(s)	143, 371
PaeI	GCATGC	2 cut(s)	550, 1156
PceI	AGGCCT	1 cut(s)	939
PciI	ACATGT	1 cut(s)	788
PcsI	WCGNNNNNNNCGW	1 cut(s)	131
PctI	GAATGC	1 cut(s)	418
PdiI	GCCGGC	1 cut(s)	462
PdmI	GAANNNNTTC	1 cut(s)	519
PfeI	GAWTC	3 cut(s)	600, 673, 892
PleI	GAGTC	2 cut(s)	206, 227
PpsI	GAGTC	2 cut(s)	206, 227
PscI	ACATGT	1 cut(s)	788
PsiI	TTATAA	1 cut(s)	984
Psp124BI	GAGCTC	1 cut(s)	1095
Psp6I	CCWGG	3 cut(s)	219, 876, 939
PspEI	GGTNACC	1 cut(s)	1349
PspGI	CCWGG	3 cut(s)	219, 876, 939
PspN4I	GGNNCC	5 cut(s)	931, 1171, 1413, 1426, 1427
PspOMI	GGGCCC	1 cut(s)	1425
PspPI	GGNCC	5 cut(s)	251, 903, 1193, 1425, 1426
PstI	CTGCAG	2 cut(s)	623, 1189
PsuI	RGATCY	1 cut(s)	712
RsaI	GTAC	5 cut(s)	124, 538, 793, 994, 1421
RsaNI	GTAC	5 cut(s)	123, 537, 792, 993, 1420
RseI	CAYNNNNRTG	1 cut(s)	1322
SacI	GAGCTC	1 cut(s)	1095
SaqAI	TTAA	4 cut(s)	471, 575, 735, 806
Sau3AI	GATC	3 cut(s)	712, 1025, 1120
Sau96I	GGNCC	5 cut(s)	251, 903, 1193, 1425, 1426
ScaI	AGTACT	1 cut(s)	538
SchI	GAGTC	2 cut(s)	206, 227
ScrFI	CCNGG	5 cut(s)	221, 286, 878, 941, 1174
SduI	GDGCHC	7 cut(s)	108, 557, 973, 1078, 1095, 1416, 1429
SfaNI	GCATC	1 cut(s)	682
SfcI	CTRYAG	3 cut(s)	619, 1185, 1451
SfuI	TTCGAA	2 cut(s)	143, 371
SinI	GGWCC	1 cut(s)	903
SmiMI	CAYNNNNRTG	1 cut(s)	1322
SmlI	CTYRAG	1 cut(s)	1444
SmoI	CTYRAG	1 cut(s)	1444
SphI	GCATGC	2 cut(s)	550, 1156
Sse9I	AATT	4 cut(s)	7, 185, 472, 1340
SseBI	AGGCCT	1 cut(s)	939
SspMI	CTAG	3 cut(s)	710, 1146, 1459
SstI	GAGCTC	1 cut(s)	1095
StuI	AGGCCT	1 cut(s)	939
StyD4I	CCNGG	5 cut(s)	219, 284, 876, 939, 1172
StyI	CCWWGG	3 cut(s)	828, 912, 1381
TaaI	ACNGT	6 cut(s)	479, 541, 955, 1265, 1390, 1455
TaqI	TCGA	5 cut(s)	87, 143, 189, 371, 1012
TasI	AATT	4 cut(s)	7, 185, 472, 1340
TatI	WGTACW	2 cut(s)	536, 791
TauI	GCSGC	5 cut(s)	256, 364, 448, 451, 755
TfiI	GAWTC	3 cut(s)	600, 673, 892
Tru1I	TTAA	4 cut(s)	471, 575, 735, 806
Tru9I	TTAA	4 cut(s)	471, 575, 735, 806
TscAI	CASTG	5 cut(s)	445, 484, 557, 574, 1395
TseFI	GTSAC	3 cut(s)	230, 301, 1349
TseI	GCWGC	9 cut(s)	320, 329, 349, 352, 464, 761, 1184, 1187, 1406
Tsp45I	GTSAC	3 cut(s)	230, 301, 1349
TspDTI	ATGAA	3 cut(s)	73, 369, 1093
TspGWI	ACGGA	1 cut(s)	226
TspRI	CASTG	5 cut(s)	445, 484, 557, 574, 1395
VneI	GTGCAC	4 cut(s)	104, 553, 969, 1074
VpaK11BI	GGWCC	1 cut(s)	903
XapI	RAATTY	2 cut(s)	7, 185
XceI	RCATGY	4 cut(s)	550, 630, 792, 1156
XmiI	GTMKAC	2 cut(s)	429, 1450
XmnI	GAANNNNTTC	1 cut(s)	519
XspI	CTAG	3 cut(s)	710, 1146, 1459
ZrmI	AGTACT	1 cut(s)	538
Zsp2I	ATGCAT	1 cut(s)	1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.