Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007991

Physical Location & Seq

Genomic Coordinates Forward (+)

8252736 .. 8254931

Gene Structure 2196 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016616

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCGAGTTTCGAGGGGAGGGTTTCGTTTTCGTCCCTTCCTAAGATAGAGAAAAGCAATACCCAATTCCACTATGCTGATGATGACTTCATCGATGCCGAATGGCCTGTGCACGAAGGTGGAGGCGGTACGACTTACCCATCAGTTTCCAAAGTTGAGAAGCAAGATTATTCGTATCAATTTCCCCCCGAATTCGACAGTTTTGGTGATGACACCGGATATGATTCTAGCCAGGAGCATTGTGGTTCTGGGGGGATGGATGGGCCGCCGGAGGTGAACTTGAAGAATGTGTTGACCGGGATGATTGCCATTGTGACTGGCCGGAACAAAGTTGCTCCCGGTGAAACACCTGAGCAGCAGCAACCCACTTCAAATGTTTCATTTCTCGGCGCAGAAAAGAATGGTGATACTTACTTGCATTCCTCAGTTTACACGCCCAGTGCCCCGCCCCTTTTTGAGCCGGCTGCCTTTAATTATAGTGCATACAAGGAAATTTTGGAGGCTGAACCCCCTGAATGGCTTCCTGACAGTTCGAGTATAGTTTGCATGCAGTGCACTTCTCCTTTCACTGCCTTAACTCGTGGGAGACATCATTGCCGATTCTGTGGGGGGATTTTCTGCAGAACATGTAGTAAAGGAAGGTGCTTGTTGCCTGTCAAGTTTAGGGAGAGGAATCCGCAGAGGGTCTGCGATGCCTGCTATGACAGGTTGGATCCTTTGCAGGGTATTCTTATTAACAGCATTAGCAATGCTGCACAAGCAGCAAAGCATGACGTCATGGATTGGACATGTACAAGAGGATGGTTAAATCTTCCTGTTGGTTTCTCCATGGAACAAGAGATATACAAAGCAACCAACACATTGAGAAGTTACTCCCAGGTTTCTAGGCTGAATCCAGAGAGGTCCATACCCTTGGCTGTTCTCAAAGGAGCCAAAGGCCTGGCAATCCTAACCGTTGCTAAAGCTGGTGCACTACTTTCTTACAAACTTGGTACTGGTTTGGTGGTTTCTCGAAGGTCAGATGGATCATGGTCTGCTCCATCAGCCATATGTTCTGTTGGCTTAGGATGGGGTGCACAGATTGGGGGTGAGCTCATGGACTTCATCATTGTCCTTCCTGATATAAAAGCTGTGAAAACCTTTTGCAGTCGCATGCATTTCTCTCTTGGTGCTGGGTGTAGTGCTGCAGCAGGACCTATTGGTAGAGTGCTAGAAGCAGATATGCGTGCTGGAGACAGGGGTTCTGGAATGTGCTATACATACAGTTGTAGCAAAGGTGCATTTGTAGGAGTATCATTAGAAGGAAATGTTGTTGCCACAAGGATGGATACAAATCTTCAATTTTATGGCGACCCTTACCTGACGACTAATGATATACTTCTTGGGACAGTGGAAAGACCAAAGGCCGCGGAGCCCCTGTATGGGGCCCTTCAATCCCTCTACTCCAGTCTACAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001726 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006897 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0008289 GO:0009987 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0022607 GO:0030029 GO:0030036 GO:0030479 GO:0030863 GO:0030864 GO:0031252 GO:0031253 GO:0031256 GO:0031344 GO:0032587 GO:0035091 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044463 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051015 GO:0051017 GO:0051128 GO:0051179 GO:0051234 GO:0051641 GO:0051666 GO:0060491 GO:0061572 GO:0061645 GO:0065007 GO:0071840 GO:0071944 GO:0097435 GO:0098590 GO:0098657 GO:0099568 GO:0120025 GO:0120032 GO:0120035 GO:0120038 GO:1900027

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FYVE Ysc84

Protein Analysis

487

Amino Acids

52.57

Weight (kDa)

5.71

Isoelectric Point (pI)

42.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	172 - 237	2e-20	FYVE zinc finger
Ysc84	PF04366	354 - 479	3.3e-38	Las17-binding protein actin regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43230
fragaria_vesca	FvH4_1g09450 FvH4_1g09450
malus_domestica	MD02G1102900.v1.1 MD15G1224000.v1.1
prunus_persica	Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1
pyrus_communis	pycom02g08060 pycom15g19820
rosa_chinensis	RchiOBHm_Chr2g0096001 RchiOBHm_Chr2g0096261
rosa_laevigata	RLG00000016616 RLG00000016630
rosa_multiflora	Rmu_co8311399.1_g000001 Rmu_sc0002497.1_g000013
rosa_roxburghii	Rroxscaffold_2G00145870
rosa_rugosa	Rorug02G0055800
rosa_samantha	Rh2AG103700 Rh2BG105200 Rh2CG107700 Rh2DG105600
rosa_wichuraiana	Rw2G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	777
AccI	GTMKAC	1 cut(s)	1450
AccII	CGCG	1 cut(s)	1409
AciI	CCGC	6 cut(s)	126, 266, 446, 677, 1407, 1409
AclWI	GGATC	3 cut(s)	707, 720, 1033
AcoI	YGGCCR	1 cut(s)	319
AcsI	RAATTY	2 cut(s)	191, 492
AcyI	GRCGYC	1 cut(s)	774
AfaI	GTAC	3 cut(s)	130, 793, 994
AfiI	CCNNNNNNNGG	5 cut(s)	516, 722, 1421, 1422, 1423
AflIII	ACRYGT	2 cut(s)	626, 788
AgsI	TTSAA	4 cut(s)	283, 372, 1340, 1433
AjnI	CCWGG	3 cut(s)	231, 876, 939
AleI	CACNNNNGTG	1 cut(s)	117
AluBI	AGCT	3 cut(s)	965, 1093, 1130
AluI	AGCT	3 cut(s)	965, 1093, 1130
Alw21I	GWGCWC	5 cut(s)	114, 557, 973, 1078, 1095
Alw26I	GTCTC	2 cut(s)	580, 1227
Alw44I	GTGCAC	4 cut(s)	110, 553, 969, 1074
AlwI	GGATC	3 cut(s)	707, 720, 1033
AoxI	GGCC	6 cut(s)	104, 263, 319, 937, 1404, 1425
ApaI	GGGCCC	1 cut(s)	1429
ApaLI	GTGCAC	4 cut(s)	110, 553, 969, 1074
ApeKI	GCWGC	7 cut(s)	355, 358, 464, 752, 761, 1184, 1187
ApoI	RAATTY	2 cut(s)	191, 492
Asp700I	GAANNNNTTC	1 cut(s)	519
AspLEI	GCGC	1 cut(s)	392
AspS9I	GGNCC	5 cut(s)	263, 903, 1193, 1425, 1426
AsuC2I	CCSGG	2 cut(s)	298, 339
AsuHPI	GGTGA	5 cut(s)	218, 286, 353, 416, 1100
AvaII	GGWCC	2 cut(s)	903, 1193
BaeGI	GKGCMC	6 cut(s)	114, 445, 557, 973, 1078, 1429
BamHI	GGATCC	1 cut(s)	712
BanII	GRGCYC	3 cut(s)	1095, 1416, 1429
BauI	CACGAG	1 cut(s)	579
Bbv12I	GWGCWC	5 cut(s)	114, 557, 973, 1078, 1095
BbvI	GCAGC	7 cut(s)	367, 370, 451, 739, 773, 1171, 1199
BccI	CCATC	8 cut(s)	148, 250, 254, 795, 1016, 1048, 1062, 1318
BciT130I	CCWGG	3 cut(s)	233, 878, 941
BciVI	GTATCC	1 cut(s)	1321
BcnI	CCSGG	2 cut(s)	298, 339
BcoDI	GTCTC	2 cut(s)	580, 1227
BfaI	CTAG	4 cut(s)	228, 885, 1211, 1459
BfmI	CTRYAG	3 cut(s)	619, 1185, 1451
BfuI	GTATCC	1 cut(s)	1321
BisI	GCNGC	9 cut(s)	266, 356, 359, 465, 753, 762, 1185, 1188, 1407
BlsI	GCNGC	9 cut(s)	267, 357, 360, 466, 754, 763, 1186, 1189, 1408
Bme1390I	CCNGG	5 cut(s)	233, 298, 339, 878, 941
Bme18I	GGWCC	2 cut(s)	903, 1193
BmgT120I	GGNCC	5 cut(s)	263, 903, 1193, 1425, 1426
BmiI	GGNNCC	5 cut(s)	714, 931, 1413, 1426, 1427
BmrFI	CCNGG	5 cut(s)	233, 298, 339, 878, 941
BmrI	ACTGGG	1 cut(s)	432
BmsI	GCATC	2 cut(s)	85, 682
BmuI	ACTGGG	1 cut(s)	432
BpmI	CTGGAG	2 cut(s)	1251, 1429
Bpu10I	CCTNAGC	2 cut(s)	351, 1063
BpuMI	CCSGG	2 cut(s)	298, 339
Bsa29I	ATCGAT	1 cut(s)	93
BsaBI	GATNNNNATC	1 cut(s)	1332
BsaHI	GRCGYC	1 cut(s)	774
BsaJI	CCNNGG	4 cut(s)	828, 876, 912, 1407
BsaWI	WCCGGW	1 cut(s)	215
BsaXI	ACNNNNNCTCC	2 cut(s)	1403, 1433
Bsc4I	CCNNNNNNNGG	5 cut(s)	516, 722, 1421, 1422, 1423
Bse118I	RCCGGY	1 cut(s)	460
Bse1I	ACTGG	4 cut(s)	322, 438, 1000, 1446
Bse3DI	GCAATG	2 cut(s)	592, 754
Bse8I	GATNNNNATC	1 cut(s)	1332
BseBI	CCWGG	3 cut(s)	233, 878, 941
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	4 cut(s)	828, 876, 912, 1407
BseGI	GGATG	6 cut(s)	261, 265, 306, 806, 1073, 1329
BseJI	GATNNNNATC	1 cut(s)	1332
BseLI	CCNNNNNNNGG	5 cut(s)	516, 722, 1421, 1422, 1423
BseMI	GCAATG	2 cut(s)	592, 754
BseMII	CTCAG	2 cut(s)	342, 438
BseNI	ACTGG	4 cut(s)	322, 438, 1000, 1446
BseSI	GKGCMC	6 cut(s)	114, 445, 557, 973, 1078, 1429
BseXI	GCAGC	7 cut(s)	367, 370, 451, 739, 773, 1171, 1199
BseYI	CCCAGC	1 cut(s)	1172
BsgI	GTGCAG	1 cut(s)	738
Bsh1236I	CGCG	1 cut(s)	1409
BshFI	GGCC	6 cut(s)	106, 265, 321, 939, 1406, 1427
BshVI	ATCGAT	1 cut(s)	93
BsiHKAI	GWGCWC	5 cut(s)	114, 557, 973, 1078, 1095
BsiSI	CCGG	6 cut(s)	216, 269, 297, 322, 339, 461
BslFI	GGGAC	2 cut(s)	19, 1399
BslI	CCNNNNNNNGG	5 cut(s)	516, 722, 1421, 1422, 1423
BsmAI	GTCTC	2 cut(s)	580, 1227
BsmFI	GGGAC	2 cut(s)	19, 1399
BsmI	GAATGC	1 cut(s)	418
BsnI	GGCC	6 cut(s)	106, 265, 321, 939, 1406, 1427
Bsp120I	GGGCCC	1 cut(s)	1425
Bsp1286I	GDGCHC	8 cut(s)	114, 445, 557, 973, 1078, 1095, 1416, 1429
Bsp1407I	TGTACA	1 cut(s)	791
Bsp143I	GATC	2 cut(s)	712, 1025
Bsp19I	CCATGG	1 cut(s)	828
BspACI	CCGC	6 cut(s)	126, 266, 446, 677, 1407, 1409
BspANI	GGCC	6 cut(s)	106, 265, 321, 939, 1406, 1427
BspCNI	CTCAG	2 cut(s)	343, 437
BspDI	ATCGAT	1 cut(s)	93
BspFNI	CGCG	1 cut(s)	1409
BspLI	GGNNCC	5 cut(s)	714, 931, 1413, 1426, 1427
BspMAI	CTGCAG	2 cut(s)	623, 1189
BspPI	GGATC	3 cut(s)	707, 720, 1033
BsrDI	GCAATG	2 cut(s)	592, 754
BsrFI	RCCGGY	1 cut(s)	460
BsrGI	TGTACA	1 cut(s)	791
BsrI	ACTGG	4 cut(s)	322, 438, 1000, 1446
BssAI	RCCGGY	1 cut(s)	460
BssECI	CCNNGG	4 cut(s)	828, 876, 912, 1407
BssMI	GATC	2 cut(s)	712, 1025
BssNI	GRCGYC	1 cut(s)	774
BssSI	CACGAG	1 cut(s)	579
BssT1I	CCWWGG	2 cut(s)	828, 912
Bst2BI	CACGAG	1 cut(s)	579
Bst2UI	CCWGG	3 cut(s)	233, 878, 941
Bst4CI	ACNGT	6 cut(s)	200, 530, 955, 1265, 1390, 1455
BstACI	GRCGYC	1 cut(s)	774
BstAPI	GCANNNNNTGC	1 cut(s)	552
BstAUI	TGTACA	1 cut(s)	791
BstC8I	GCNNGC	5 cut(s)	462, 548, 697, 1154, 1227
BstDEI	CTNAG	4 cut(s)	42, 351, 424, 1063
BstDSI	CCRYGG	2 cut(s)	828, 1407
BstF5I	GGATG	6 cut(s)	261, 265, 306, 806, 1073, 1329
BstFNI	CGCG	1 cut(s)	1409
BstHHI	GCGC	1 cut(s)	392
BstKTI	GATC	2 cut(s)	715, 1028
BstMAI	GTCTC	2 cut(s)	580, 1227
BstMBI	GATC	2 cut(s)	712, 1025
BstMWI	GCNNNNNNNGC	5 cut(s)	552, 696, 758, 761, 1043
BstNI	CCWGG	3 cut(s)	233, 878, 941
BstNSI	RCATGY	4 cut(s)	550, 630, 792, 1156
BstSCI	CCNGG	5 cut(s)	231, 296, 337, 876, 939
BstSFI	CTRYAG	3 cut(s)	619, 1185, 1451
BstSLI	GKGCMC	6 cut(s)	114, 445, 557, 973, 1078, 1429
BstUI	CGCG	1 cut(s)	1409
BstV1I	GCAGC	7 cut(s)	367, 370, 451, 739, 773, 1171, 1199
BstX2I	RGATCY	1 cut(s)	712
BstXI	CCANNNNNNTGG	3 cut(s)	913, 940, 1324
BstYI	RGATCY	1 cut(s)	712
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	1 cut(s)	1321
BsuRI	GGCC	6 cut(s)	106, 265, 321, 939, 1406, 1427
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	2 cut(s)	828, 1407
BtgZI	GCGATG	1 cut(s)	705
BtsCI	GGATG	6 cut(s)	261, 265, 306, 806, 1073, 1329
BtsI	GCAGTG	2 cut(s)	557, 567
BtsIMutI	CAGTG	4 cut(s)	445, 557, 567, 1395
Cac8I	GCNNGC	5 cut(s)	462, 548, 697, 1154, 1227
CfoI	GCGC	1 cut(s)	392
Cfr10I	RCCGGY	1 cut(s)	460
Cfr13I	GGNCC	5 cut(s)	263, 903, 1193, 1425, 1426
Cfr42I	CCGCGG	1 cut(s)	1410
ClaI	ATCGAT	1 cut(s)	93
Csp6I	GTAC	3 cut(s)	129, 792, 993
CviAII	CATG	9 cut(s)	547, 627, 770, 778, 789, 829, 1029, 1096, 1153
CviQI	GTAC	3 cut(s)	129, 792, 993
DdeI	CTNAG	4 cut(s)	42, 351, 424, 1063
DpnI	GATC	2 cut(s)	714, 1027
DpnII	GATC	2 cut(s)	712, 1025
EaeI	YGGCCR	1 cut(s)	319
Ecl136II	GAGCTC	1 cut(s)	1093
Eco130I	CCWWGG	2 cut(s)	828, 912
Eco147I	AGGCCT	1 cut(s)	939
Eco24I	GRGCYC	3 cut(s)	1095, 1416, 1429
Eco47I	GGWCC	2 cut(s)	903, 1193
Eco53kI	GAGCTC	1 cut(s)	1093
EcoICRI	GAGCTC	1 cut(s)	1093
EcoO109I	RGGNCCY	3 cut(s)	1193, 1425, 1426
EcoRI	GAATTC	1 cut(s)	191
EcoRII	CCWGG	3 cut(s)	231, 876, 939
EcoT14I	CCWWGG	2 cut(s)	828, 912
EcoT22I	ATGCAT	1 cut(s)	1158
EcoT38I	GRGCYC	3 cut(s)	1095, 1416, 1429
ErhI	CCWWGG	2 cut(s)	828, 912
FaeI	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
FaqI	GGGAC	2 cut(s)	19, 1399
FatI	CATG	9 cut(s)	546, 626, 769, 777, 788, 828, 1028, 1095, 1152
FauI	CCCGC	1 cut(s)	453
FauNDI	CATATG	1 cut(s)	1049
FblI	GTMKAC	1 cut(s)	1450
Fnu4HI	GCNGC	9 cut(s)	266, 356, 359, 465, 753, 762, 1185, 1188, 1407
FokI	GGATG	6 cut(s)	268, 272, 313, 813, 1080, 1336
FriOI	GRGCYC	3 cut(s)	1095, 1416, 1429
Fsp4HI	GCNGC	9 cut(s)	266, 356, 359, 465, 753, 762, 1185, 1188, 1407
FspBI	CTAG	4 cut(s)	228, 885, 1211, 1459
GlaI	GCGC	1 cut(s)	391
GluI	GCNGC	9 cut(s)	266, 356, 359, 465, 753, 762, 1185, 1188, 1407
GsaI	CCCAGC	1 cut(s)	1176
GsuI	CTGGAG	2 cut(s)	1251, 1429
HaeIII	GGCC	6 cut(s)	106, 265, 321, 939, 1406, 1427
HapII	CCGG	6 cut(s)	216, 269, 297, 322, 339, 461
HhaI	GCGC	1 cut(s)	392
Hin1I	GRCGYC	1 cut(s)	774
Hin1II	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
Hin6I	GCGC	1 cut(s)	390
HinP1I	GCGC	1 cut(s)	390
HincII	GTYRAC	1 cut(s)	294
HindII	GTYRAC	1 cut(s)	294
HinfI	GANTC	4 cut(s)	224, 600, 673, 892
HpaII	CCGG	6 cut(s)	216, 269, 297, 322, 339, 461
HphI	GGTGA	5 cut(s)	218, 286, 353, 416, 1100
Hpy166II	GTNNAC	8 cut(s)	112, 277, 294, 430, 555, 971, 1076, 1451
Hpy188I	TCNGA	1 cut(s)	1021
Hpy188III	TCNNGA	5 cut(s)	524, 896, 1011, 1118, 1245
Hpy8I	GTNNAC	8 cut(s)	112, 277, 294, 430, 555, 971, 1076, 1451
HpyAV	CCTTC	7 cut(s)	47, 110, 633, 1008, 1124, 1295, 1439
HpyCH4III	ACNGT	6 cut(s)	200, 530, 955, 1265, 1390, 1455
HpyCH4IV	ACGT	1 cut(s)	774
HpyF10VI	GCNNNNNNNGC	5 cut(s)	552, 696, 758, 761, 1043
HpyF3I	CTNAG	4 cut(s)	42, 351, 424, 1063
HpySE526I	ACGT	1 cut(s)	774
Hsp92I	GRCGYC	1 cut(s)	774
Hsp92II	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
HspAI	GCGC	1 cut(s)	390
KroI	GCCGGC	1 cut(s)	460
KroNI	GCCGGC	1 cut(s)	462
KspI	CCGCGG	1 cut(s)	1410
Kzo9I	GATC	2 cut(s)	712, 1025
LmnI	GCTCC	5 cut(s)	235, 340, 929, 1042, 1411
Lsp1109I	GCAGC	7 cut(s)	367, 370, 451, 739, 773, 1171, 1199
LweI	GCATC	2 cut(s)	85, 682
MaeI	CTAG	4 cut(s)	228, 885, 1211, 1459
MaeII	ACGT	1 cut(s)	774
MaeIII	GTNAC	2 cut(s)	313, 869
MalI	GATC	2 cut(s)	714, 1027
MboI	GATC	2 cut(s)	712, 1025
MboII	GAAGA	3 cut(s)	295, 803, 1328
MflI	RGATCY	1 cut(s)	712
MhlI	GDGCHC	8 cut(s)	114, 445, 557, 973, 1078, 1095, 1416, 1429
MluCI	AATT	6 cut(s)	65, 179, 191, 472, 492, 1340
MmeI	TCCRAC	1 cut(s)	690
Mph1103I	ATGCAT	1 cut(s)	1158
MroNI	GCCGGC	1 cut(s)	460
MroXI	GAANNNNTTC	1 cut(s)	519
MseI	TTAA	4 cut(s)	471, 575, 735, 806
MslI	CAYNNNNRTG	2 cut(s)	117, 1322
MspA1I	CMGCKG	1 cut(s)	1409
MspI	CCGG	6 cut(s)	216, 269, 297, 322, 339, 461
MspR9I	CCNGG	5 cut(s)	233, 298, 339, 878, 941
Mva1269I	GAATGC	1 cut(s)	418
MvaI	CCWGG	3 cut(s)	233, 878, 941
MvnI	CGCG	1 cut(s)	1409
MwoI	GCNNNNNNNGC	5 cut(s)	552, 696, 758, 761, 1043
NaeI	GCCGGC	1 cut(s)	462
NciI	CCSGG	2 cut(s)	298, 339
NcoI	CCATGG	1 cut(s)	828
NdeI	CATATG	1 cut(s)	1049
NdeII	GATC	2 cut(s)	712, 1025
NgoMIV	GCCGGC	1 cut(s)	460
NlaIII	CATG	9 cut(s)	550, 630, 773, 781, 792, 832, 1032, 1099, 1156
NlaIV	GGNNCC	5 cut(s)	714, 931, 1413, 1426, 1427
NmeAIII	GCCGAG	1 cut(s)	366
NmuCI	GTSAC	1 cut(s)	313
NsiI	ATGCAT	1 cut(s)	1158
NspI	RCATGY	4 cut(s)	550, 630, 792, 1156
OliI	CACNNNNGTG	1 cut(s)	117
PaeI	GCATGC	2 cut(s)	550, 1156
PceI	AGGCCT	1 cut(s)	939
PciI	ACATGT	2 cut(s)	626, 788
PctI	GAATGC	1 cut(s)	418
PdiI	GCCGGC	1 cut(s)	462
PdmI	GAANNNNTTC	1 cut(s)	519
PfeI	GAWTC	4 cut(s)	224, 600, 673, 892
PkrI	GCNGC	9 cut(s)	267, 357, 360, 466, 754, 763, 1186, 1189, 1408
PpuMI	RGGWCCY	1 cut(s)	1193
PscI	ACATGT	2 cut(s)	626, 788
Psp124BI	GAGCTC	1 cut(s)	1095
Psp5II	RGGWCCY	1 cut(s)	1193
Psp6I	CCWGG	3 cut(s)	231, 876, 939
PspFI	CCCAGC	1 cut(s)	1172
PspGI	CCWGG	3 cut(s)	231, 876, 939
PspN4I	GGNNCC	5 cut(s)	714, 931, 1413, 1426, 1427
PspOMI	GGGCCC	1 cut(s)	1425
PspPI	GGNCC	5 cut(s)	263, 903, 1193, 1425, 1426
PspPPI	RGGWCCY	1 cut(s)	1193
PstI	CTGCAG	2 cut(s)	623, 1189
PsuI	RGATCY	1 cut(s)	712
RsaI	GTAC	3 cut(s)	130, 793, 994
RsaNI	GTAC	3 cut(s)	129, 792, 993
RseI	CAYNNNNRTG	2 cut(s)	117, 1322
SacI	GAGCTC	1 cut(s)	1095
SacII	CCGCGG	1 cut(s)	1410
SaqAI	TTAA	4 cut(s)	471, 575, 735, 806
SatI	GCNGC	9 cut(s)	266, 356, 359, 465, 753, 762, 1185, 1188, 1407
Sau3AI	GATC	2 cut(s)	712, 1025
Sau96I	GGNCC	5 cut(s)	263, 903, 1193, 1425, 1426
ScrFI	CCNGG	5 cut(s)	233, 298, 339, 878, 941
SduI	GDGCHC	8 cut(s)	114, 445, 557, 973, 1078, 1095, 1416, 1429
SfaNI	GCATC	2 cut(s)	85, 682
SfcI	CTRYAG	3 cut(s)	619, 1185, 1451
Sfr303I	CCGCGG	1 cut(s)	1410
SgrBI	CCGCGG	1 cut(s)	1410
SinI	GGWCC	2 cut(s)	903, 1193
SmiMI	CAYNNNNRTG	2 cut(s)	117, 1322
SphI	GCATGC	2 cut(s)	550, 1156
Sse9I	AATT	6 cut(s)	65, 179, 191, 472, 492, 1340
SseBI	AGGCCT	1 cut(s)	939
SsiI	CCGC	6 cut(s)	126, 266, 446, 677, 1407, 1409
SspMI	CTAG	4 cut(s)	228, 885, 1211, 1459
SstI	GAGCTC	1 cut(s)	1095
StuI	AGGCCT	1 cut(s)	939
StyD4I	CCNGG	5 cut(s)	231, 296, 337, 876, 939
StyI	CCWWGG	2 cut(s)	828, 912
TaaI	ACNGT	6 cut(s)	200, 530, 955, 1265, 1390, 1455
TaiI	ACGT	1 cut(s)	777
TaqI	TCGA	5 cut(s)	12, 93, 195, 533, 1012
TasI	AATT	6 cut(s)	65, 179, 191, 472, 492, 1340
TatI	WGTACW	1 cut(s)	791
TauI	GCSGC	2 cut(s)	268, 1409
TfiI	GAWTC	4 cut(s)	224, 600, 673, 892
Tru1I	TTAA	4 cut(s)	471, 575, 735, 806
Tru9I	TTAA	4 cut(s)	471, 575, 735, 806
TscAI	CASTG	4 cut(s)	445, 557, 574, 1395
TseFI	GTSAC	1 cut(s)	313
TseI	GCWGC	7 cut(s)	355, 358, 464, 752, 761, 1184, 1187
Tsp45I	GTSAC	1 cut(s)	313
TspDTI	ATGAA	3 cut(s)	79, 369, 1093
TspRI	CASTG	4 cut(s)	445, 557, 574, 1395
VneI	GTGCAC	4 cut(s)	110, 553, 969, 1074
VpaK11BI	GGWCC	2 cut(s)	903, 1193
XapI	RAATTY	2 cut(s)	191, 492
XceI	RCATGY	4 cut(s)	550, 630, 792, 1156
XcmI	CCANNNNNNNNNTGG	1 cut(s)	239
XmiI	GTMKAC	1 cut(s)	1450
XmnI	GAANNNNTTC	1 cut(s)	519
XspI	CTAG	4 cut(s)	228, 885, 1211, 1459
ZraI	GACGTC	1 cut(s)	775
Zsp2I	ATGCAT	1 cut(s)	1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.