Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007991

Physical Location & Seq

Genomic Coordinates Reverse (-)

83731485 .. 83734501

Gene Structure 3017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGGATGGGCCGCCGGAGGTGAACTTGAAGAATGTGTTGACCGGGATGATTGCCATTGTGACTGGCCGGAACAAAGTTGCTCCCGGTGAAACACCTGAGCAGCAGCAACCCACTTCAAATGTTTCATTTCTCGGCGCAGAAAAGAATGGTGATACTTACTTGCATTCCTCGGTTTACACGCCCAGTGCCCCTCCCCTTTTTGAGCCGGTGGCCTTTAATTATAGTGCATACAAGGAAATTTTGGAGGCTGAACCCCCTGAATGGCTTCCTGACAGTTCGAGTATAGTTTGCATGCAGTGCACTTCTCCTTTCACTGCCTTAACTCGTGGGAGACATCATTGCCGATTCTGTGGGGGGATTTTCTGCAGAACATGTAGTAAAGGAAGGTGCTTGTTGCCTGTCAAGTTTAGGGAGAGGAATCCGCAGAGGGTCTGCGATGCCTGCTATGACAGGTTGGATCCTTTGCAGGGTATTCTTATTAACAGCATTAGCAATGCTGCACAAGCAGCAAAGCATGACGTCATGGATTGGACATGTACAAGAGGATGGTTAAATCTTCCTGTTGGTTTCTCCATGGAACAAGAGATATACAAAGCAACCAACACATTGAGAAGTTACTCCCAGGTTTCTCGGCTGAATCCGGAGAGGTCCATACCCTTGGCTGTTCTCAAAGGAGCCAAAGGCCTGGCAATCCTAACCGTTGCTAAAGCTGGTGCACTACTTTCTTACAAACTTGGTACTGGTTTGGTGGTTTCTCGAAGGTCAGATGGATCATGGTCTGCTCCATCAGCCATATGTTCTGTTGGCTTAGGATGGGGTGCACAGATTGGGGGTGAGCTCATGGACTTCATCATTGTCCTTCCTGATATCAAAGCTGTGAAAACCTTTTGTAGTCGCATGCATTTCTCTCTTGGTGCTGGGTGTAGTGCTGCAGCAGGACCTATTGGTAGAGTGCTAGAAGCAGATATGCGTGCTGGAGACAGGGGTTCTGGAATGTGCTATACATACAGTTGTAGCAAAGGTATGATAACCCATTCAGACTCGAAAGGCTTTCTAGCTATAAAGTCTAGGATCATAAATTTCGTACATGGCACATGTGCATTTGTAGGAGTATCATTAGAAGGAAATGTTGTTGCCACAAGGATGGATACAAATCTTCAATTTTATGGCGACCCTTACCTGACGACTAATGATATACTTCTTGGGACAGTGGAAAGACCAAAGGCCGCGGAACCCCTGTATGGGGCCCTTCAATCCCTCTACTCCAGTCTACAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001726 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006897 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0008289 GO:0009987 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0022607 GO:0030029 GO:0030036 GO:0030479 GO:0030863 GO:0030864 GO:0031252 GO:0031253 GO:0031256 GO:0031344 GO:0032587 GO:0035091 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044463 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051015 GO:0051017 GO:0051128 GO:0051179 GO:0051234 GO:0051641 GO:0051666 GO:0060491 GO:0061572 GO:0061645 GO:0065007 GO:0071840 GO:0071944 GO:0097435 GO:0098590 GO:0098657 GO:0099568 GO:0120025 GO:0120032 GO:0120035 GO:0120038 GO:1900027

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FYVE Ysc84

Protein Analysis

426

Amino Acids

45.99

Weight (kDa)

8.52

Isoelectric Point (pI)

38.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	87 - 152	1.7e-20	FYVE zinc finger
Ysc84	PF04366	269 - 344	1.2e-18	Las17-binding protein actin regulator
Ysc84	PF04366	355 - 419	9.4e-13	Las17-binding protein actin regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43230
fragaria_vesca	FvH4_1g09450 FvH4_1g09450
malus_domestica	MD02G1102900.v1.1 MD15G1224000.v1.1
prunus_persica	Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1
pyrus_communis	pycom02g08060 pycom15g19820
rosa_chinensis	RchiOBHm_Chr2g0096001 RchiOBHm_Chr2g0096261
rosa_laevigata	RLG00000016616 RLG00000016630
rosa_multiflora	Rmu_co8311399.1_g000001 Rmu_sc0002497.1_g000013
rosa_roxburghii	Rroxscaffold_2G00145870
rosa_rugosa	Rorug02G0055800
rosa_samantha	Rh2AG103700 Rh2BG105200 Rh2CG107700 Rh2DG105600
rosa_wichuraiana	Rw2G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	522
AccI	GTMKAC	1 cut(s)	1270
AccII	CGCG	1 cut(s)	1229
AccIII	TCCGGA	1 cut(s)	640
AciI	CCGC	4 cut(s)	11, 422, 1227, 1229
AclWI	GGATC	4 cut(s)	452, 465, 778, 1079
AcoI	YGGCCR	1 cut(s)	64
AcsI	RAATTY	2 cut(s)	237, 1078
AcyI	GRCGYC	1 cut(s)	519
AfaI	GTAC	3 cut(s)	538, 739, 1086
AfiI	CCNNNNNNNGG	5 cut(s)	261, 467, 1241, 1242, 1243
AflIII	ACRYGT	3 cut(s)	371, 533, 1094
AgsI	TTSAA	4 cut(s)	28, 117, 1160, 1253
AjnI	CCWGG	2 cut(s)	621, 684
AluBI	AGCT	4 cut(s)	710, 838, 875, 1058
AluI	AGCT	4 cut(s)	710, 838, 875, 1058
Alw21I	GWGCWC	4 cut(s)	302, 718, 823, 840
Alw26I	GTCTC	2 cut(s)	325, 972
Alw44I	GTGCAC	3 cut(s)	298, 714, 819
AlwI	GGATC	4 cut(s)	452, 465, 778, 1079
Aor13HI	TCCGGA	1 cut(s)	640
AoxI	GGCC	6 cut(s)	8, 64, 210, 682, 1224, 1245
ApaI	GGGCCC	1 cut(s)	1249
ApaLI	GTGCAC	3 cut(s)	298, 714, 819
ApeKI	GCWGC	6 cut(s)	100, 103, 497, 506, 929, 932
ApoI	RAATTY	2 cut(s)	237, 1078
Asp700I	GAANNNNTTC	1 cut(s)	264
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	5 cut(s)	8, 648, 938, 1245, 1246
AsuC2I	CCSGG	2 cut(s)	43, 84
AsuHPI	GGTGA	4 cut(s)	31, 98, 161, 845
AvaII	GGWCC	2 cut(s)	648, 938
BaeGI	GKGCMC	5 cut(s)	190, 302, 718, 823, 1249
BamHI	GGATCC	1 cut(s)	457
BanII	GRGCYC	2 cut(s)	840, 1249
BauI	CACGAG	1 cut(s)	324
Bbv12I	GWGCWC	4 cut(s)	302, 718, 823, 840
BbvI	GCAGC	6 cut(s)	112, 115, 484, 518, 916, 944
BccI	CCATC	5 cut(s)	540, 761, 793, 807, 1138
BciT130I	CCWGG	2 cut(s)	623, 686
BciVI	GTATCC	1 cut(s)	1141
BcnI	CCSGG	2 cut(s)	43, 84
BcoDI	GTCTC	2 cut(s)	325, 972
BfaI	CTAG	4 cut(s)	956, 1055, 1068, 1279
BfmI	CTRYAG	3 cut(s)	364, 930, 1271
BfuI	GTATCC	1 cut(s)	1141
BisI	GCNGC	8 cut(s)	11, 101, 104, 498, 507, 930, 933, 1227
BlsI	GCNGC	8 cut(s)	12, 102, 105, 499, 508, 931, 934, 1228
Bme1390I	CCNGG	4 cut(s)	43, 84, 623, 686
Bme18I	GGWCC	2 cut(s)	648, 938
BmgT120I	GGNCC	5 cut(s)	8, 648, 938, 1245, 1246
BmiI	GGNNCC	5 cut(s)	459, 676, 1233, 1246, 1247
BmrFI	CCNGG	4 cut(s)	43, 84, 623, 686
BmrI	ACTGGG	1 cut(s)	177
BmsI	GCATC	1 cut(s)	427
BmuI	ACTGGG	1 cut(s)	177
BpmI	CTGGAG	2 cut(s)	996, 1249
Bpu10I	CCTNAGC	2 cut(s)	96, 808
BpuMI	CCSGG	2 cut(s)	43, 84
BsaBI	GATNNNNATC	1 cut(s)	1152
BsaHI	GRCGYC	1 cut(s)	519
BsaJI	CCNNGG	5 cut(s)	168, 573, 621, 657, 1227
BsaWI	WCCGGW	1 cut(s)	640
Bsc4I	CCNNNNNNNGG	5 cut(s)	261, 467, 1241, 1242, 1243
Bse118I	RCCGGY	1 cut(s)	205
Bse1I	ACTGG	4 cut(s)	67, 183, 745, 1266
Bse3DI	GCAATG	2 cut(s)	337, 499
Bse8I	GATNNNNATC	1 cut(s)	1152
BseAI	TCCGGA	1 cut(s)	640
BseBI	CCWGG	2 cut(s)	623, 686
BseDI	CCNNGG	5 cut(s)	168, 573, 621, 657, 1227
BseGI	GGATG	5 cut(s)	10, 51, 551, 818, 1149
BseJI	GATNNNNATC	1 cut(s)	1152
BseLI	CCNNNNNNNGG	5 cut(s)	261, 467, 1241, 1242, 1243
BseMI	GCAATG	2 cut(s)	337, 499
BseMII	CTCAG	1 cut(s)	87
BseNI	ACTGG	4 cut(s)	67, 183, 745, 1266
BseSI	GKGCMC	5 cut(s)	190, 302, 718, 823, 1249
BseXI	GCAGC	6 cut(s)	112, 115, 484, 518, 916, 944
BseYI	CCCAGC	1 cut(s)	917
BsgI	GTGCAG	1 cut(s)	483
Bsh1236I	CGCG	1 cut(s)	1229
BshFI	GGCC	6 cut(s)	10, 66, 212, 684, 1226, 1247
BsiHKAI	GWGCWC	4 cut(s)	302, 718, 823, 840
BsiSI	CCGG	6 cut(s)	14, 42, 67, 84, 206, 641
BslFI	GGGAC	1 cut(s)	1219
BslI	CCNNNNNNNGG	5 cut(s)	261, 467, 1241, 1242, 1243
BsmAI	GTCTC	2 cut(s)	325, 972
BsmFI	GGGAC	1 cut(s)	1219
BsmI	GAATGC	1 cut(s)	163
BsnI	GGCC	6 cut(s)	10, 66, 212, 684, 1226, 1247
Bsp120I	GGGCCC	1 cut(s)	1245
Bsp1286I	GDGCHC	6 cut(s)	190, 302, 718, 823, 840, 1249
Bsp13I	TCCGGA	1 cut(s)	640
Bsp1407I	TGTACA	1 cut(s)	536
Bsp143I	GATC	3 cut(s)	457, 770, 1071
Bsp19I	CCATGG	1 cut(s)	573
BspACI	CCGC	4 cut(s)	11, 422, 1227, 1229
BspANI	GGCC	6 cut(s)	10, 66, 212, 684, 1226, 1247
BspCNI	CTCAG	1 cut(s)	88
BspEI	TCCGGA	1 cut(s)	640
BspFNI	CGCG	1 cut(s)	1229
BspLI	GGNNCC	5 cut(s)	459, 676, 1233, 1246, 1247
BspMAI	CTGCAG	2 cut(s)	368, 934
BspPI	GGATC	4 cut(s)	452, 465, 778, 1079
BsrDI	GCAATG	2 cut(s)	337, 499
BsrFI	RCCGGY	1 cut(s)	205
BsrGI	TGTACA	1 cut(s)	536
BsrI	ACTGG	4 cut(s)	67, 183, 745, 1266
BssAI	RCCGGY	1 cut(s)	205
BssECI	CCNNGG	5 cut(s)	168, 573, 621, 657, 1227
BssMI	GATC	3 cut(s)	457, 770, 1071
BssNI	GRCGYC	1 cut(s)	519
BssSI	CACGAG	1 cut(s)	324
BssT1I	CCWWGG	2 cut(s)	573, 657
Bst2BI	CACGAG	1 cut(s)	324
Bst2UI	CCWGG	2 cut(s)	623, 686
Bst4CI	ACNGT	5 cut(s)	275, 700, 1010, 1210, 1275
BstACI	GRCGYC	1 cut(s)	519
BstAPI	GCANNNNNTGC	1 cut(s)	297
BstAUI	TGTACA	1 cut(s)	536
BstC8I	GCNNGC	4 cut(s)	293, 442, 899, 972
BstDEI	CTNAG	2 cut(s)	96, 808
BstDSI	CCRYGG	2 cut(s)	573, 1227
BstF5I	GGATG	5 cut(s)	10, 51, 551, 818, 1149
BstFNI	CGCG	1 cut(s)	1229
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	3 cut(s)	460, 773, 1074
BstMAI	GTCTC	2 cut(s)	325, 972
BstMBI	GATC	3 cut(s)	457, 770, 1071
BstMWI	GCNNNNNNNGC	5 cut(s)	297, 441, 503, 506, 788
BstNI	CCWGG	2 cut(s)	623, 686
BstNSI	RCATGY	5 cut(s)	295, 375, 537, 901, 1098
BstSCI	CCNGG	4 cut(s)	41, 82, 621, 684
BstSFI	CTRYAG	3 cut(s)	364, 930, 1271
BstSLI	GKGCMC	5 cut(s)	190, 302, 718, 823, 1249
BstUI	CGCG	1 cut(s)	1229
BstV1I	GCAGC	6 cut(s)	112, 115, 484, 518, 916, 944
BstX2I	RGATCY	1 cut(s)	457
BstXI	CCANNNNNNTGG	3 cut(s)	658, 685, 1144
BstYI	RGATCY	1 cut(s)	457
BsuI	GTATCC	1 cut(s)	1141
BsuRI	GGCC	6 cut(s)	10, 66, 212, 684, 1226, 1247
BtgI	CCRYGG	2 cut(s)	573, 1227
BtgZI	GCGATG	1 cut(s)	450
BtsCI	GGATG	5 cut(s)	10, 51, 551, 818, 1149
BtsI	GCAGTG	2 cut(s)	302, 312
BtsIMutI	CAGTG	4 cut(s)	190, 302, 312, 1215
Cac8I	GCNNGC	4 cut(s)	293, 442, 899, 972
CfoI	GCGC	1 cut(s)	137
Cfr10I	RCCGGY	1 cut(s)	205
Cfr13I	GGNCC	5 cut(s)	8, 648, 938, 1245, 1246
Cfr42I	CCGCGG	1 cut(s)	1230
Csp6I	GTAC	3 cut(s)	537, 738, 1085
CviQI	GTAC	3 cut(s)	537, 738, 1085
DdeI	CTNAG	2 cut(s)	96, 808
DpnI	GATC	3 cut(s)	459, 772, 1073
DpnII	GATC	3 cut(s)	457, 770, 1071
EaeI	YGGCCR	1 cut(s)	64
Ecl136II	GAGCTC	1 cut(s)	838
Eco130I	CCWWGG	2 cut(s)	573, 657
Eco147I	AGGCCT	1 cut(s)	684
Eco24I	GRGCYC	2 cut(s)	840, 1249
Eco32I	GATATC	1 cut(s)	868
Eco47I	GGWCC	2 cut(s)	648, 938
Eco53kI	GAGCTC	1 cut(s)	838
EcoICRI	GAGCTC	1 cut(s)	838
EcoO109I	RGGNCCY	3 cut(s)	938, 1245, 1246
EcoRII	CCWGG	2 cut(s)	621, 684
EcoRV	GATATC	1 cut(s)	868
EcoT14I	CCWWGG	2 cut(s)	573, 657
EcoT22I	ATGCAT	1 cut(s)	903
EcoT38I	GRGCYC	2 cut(s)	840, 1249
ErhI	CCWWGG	2 cut(s)	573, 657
FaqI	GGGAC	1 cut(s)	1219
FauNDI	CATATG	1 cut(s)	794
FblI	GTMKAC	1 cut(s)	1270
Fnu4HI	GCNGC	8 cut(s)	11, 101, 104, 498, 507, 930, 933, 1227
FokI	GGATG	5 cut(s)	17, 58, 558, 825, 1156
FriOI	GRGCYC	2 cut(s)	840, 1249
Fsp4HI	GCNGC	8 cut(s)	11, 101, 104, 498, 507, 930, 933, 1227
FspBI	CTAG	4 cut(s)	956, 1055, 1068, 1279
GlaI	GCGC	1 cut(s)	136
GluI	GCNGC	8 cut(s)	11, 101, 104, 498, 507, 930, 933, 1227
GsaI	CCCAGC	1 cut(s)	921
GsuI	CTGGAG	2 cut(s)	996, 1249
HaeIII	GGCC	6 cut(s)	10, 66, 212, 684, 1226, 1247
HapII	CCGG	6 cut(s)	14, 42, 67, 84, 206, 641
HhaI	GCGC	1 cut(s)	137
Hin1I	GRCGYC	1 cut(s)	519
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HincII	GTYRAC	1 cut(s)	39
HindII	GTYRAC	1 cut(s)	39
HinfI	GANTC	4 cut(s)	345, 418, 637, 1040
HpaII	CCGG	6 cut(s)	14, 42, 67, 84, 206, 641
HphI	GGTGA	4 cut(s)	31, 98, 161, 845
Hpy166II	GTNNAC	7 cut(s)	22, 39, 175, 300, 716, 821, 1271
Hpy188I	TCNGA	2 cut(s)	766, 1039
Hpy188III	TCNNGA	5 cut(s)	269, 641, 756, 863, 990
Hpy8I	GTNNAC	7 cut(s)	22, 39, 175, 300, 716, 821, 1271
HpyAV	CCTTC	5 cut(s)	378, 753, 869, 1115, 1259
HpyCH4III	ACNGT	5 cut(s)	275, 700, 1010, 1210, 1275
HpyCH4IV	ACGT	1 cut(s)	519
HpyF10VI	GCNNNNNNNGC	5 cut(s)	297, 441, 503, 506, 788
HpyF3I	CTNAG	2 cut(s)	96, 808
HpySE526I	ACGT	1 cut(s)	519
Hsp92I	GRCGYC	1 cut(s)	519
HspAI	GCGC	1 cut(s)	135
Kpn2I	TCCGGA	1 cut(s)	640
KspI	CCGCGG	1 cut(s)	1230
Kzo9I	GATC	3 cut(s)	457, 770, 1071
LmnI	GCTCC	3 cut(s)	85, 674, 787
Lsp1109I	GCAGC	6 cut(s)	112, 115, 484, 518, 916, 944
LweI	GCATC	1 cut(s)	427
MaeI	CTAG	4 cut(s)	956, 1055, 1068, 1279
MaeII	ACGT	1 cut(s)	519
MaeIII	GTNAC	2 cut(s)	58, 614
MalI	GATC	3 cut(s)	459, 772, 1073
MboI	GATC	3 cut(s)	457, 770, 1071
MboII	GAAGA	3 cut(s)	40, 548, 1148
MflI	RGATCY	1 cut(s)	457
MhlI	GDGCHC	6 cut(s)	190, 302, 718, 823, 840, 1249
MluCI	AATT	4 cut(s)	217, 237, 1078, 1160
MlyI	GAGTC	1 cut(s)	1034
MmeI	TCCRAC	1 cut(s)	435
MnlI	CCTC	9 cut(s)	10, 178, 201, 238, 408, 420, 536, 639, 1268
Mph1103I	ATGCAT	1 cut(s)	903
MroI	TCCGGA	1 cut(s)	640
MroXI	GAANNNNTTC	1 cut(s)	264
MseI	TTAA	4 cut(s)	216, 320, 480, 551
MslI	CAYNNNNRTG	1 cut(s)	1142
MspA1I	CMGCKG	1 cut(s)	1229
MspI	CCGG	6 cut(s)	14, 42, 67, 84, 206, 641
MspR9I	CCNGG	4 cut(s)	43, 84, 623, 686
Mva1269I	GAATGC	1 cut(s)	163
MvaI	CCWGG	2 cut(s)	623, 686
MvnI	CGCG	1 cut(s)	1229
MwoI	GCNNNNNNNGC	5 cut(s)	297, 441, 503, 506, 788
NciI	CCSGG	2 cut(s)	43, 84
NcoI	CCATGG	1 cut(s)	573
NdeI	CATATG	1 cut(s)	794
NdeII	GATC	3 cut(s)	457, 770, 1071
NlaIV	GGNNCC	5 cut(s)	459, 676, 1233, 1246, 1247
NmeAIII	GCCGAG	2 cut(s)	111, 610
NmuCI	GTSAC	1 cut(s)	58
NsiI	ATGCAT	1 cut(s)	903
NspI	RCATGY	5 cut(s)	295, 375, 537, 901, 1098
PaeI	GCATGC	2 cut(s)	295, 901
PceI	AGGCCT	1 cut(s)	684
PciI	ACATGT	3 cut(s)	371, 533, 1094
PctI	GAATGC	1 cut(s)	163
PdmI	GAANNNNTTC	1 cut(s)	264
PfeI	GAWTC	3 cut(s)	345, 418, 637
PkrI	GCNGC	8 cut(s)	12, 102, 105, 499, 508, 931, 934, 1228
PleI	GAGTC	1 cut(s)	1034
PpsI	GAGTC	1 cut(s)	1034
PpuMI	RGGWCCY	1 cut(s)	938
PscI	ACATGT	3 cut(s)	371, 533, 1094
Psp124BI	GAGCTC	1 cut(s)	840
Psp5II	RGGWCCY	1 cut(s)	938
Psp6I	CCWGG	2 cut(s)	621, 684
PspFI	CCCAGC	1 cut(s)	917
PspGI	CCWGG	2 cut(s)	621, 684
PspN4I	GGNNCC	5 cut(s)	459, 676, 1233, 1246, 1247
PspOMI	GGGCCC	1 cut(s)	1245
PspPI	GGNCC	5 cut(s)	8, 648, 938, 1245, 1246
PspPPI	RGGWCCY	1 cut(s)	938
PstI	CTGCAG	2 cut(s)	368, 934
PsuI	RGATCY	1 cut(s)	457
RsaI	GTAC	3 cut(s)	538, 739, 1086
RsaNI	GTAC	3 cut(s)	537, 738, 1085
RseI	CAYNNNNRTG	1 cut(s)	1142
SacI	GAGCTC	1 cut(s)	840
SacII	CCGCGG	1 cut(s)	1230
SaqAI	TTAA	4 cut(s)	216, 320, 480, 551
SatI	GCNGC	8 cut(s)	11, 101, 104, 498, 507, 930, 933, 1227
Sau3AI	GATC	3 cut(s)	457, 770, 1071
Sau96I	GGNCC	5 cut(s)	8, 648, 938, 1245, 1246
SchI	GAGTC	1 cut(s)	1034
ScrFI	CCNGG	4 cut(s)	43, 84, 623, 686
SduI	GDGCHC	6 cut(s)	190, 302, 718, 823, 840, 1249
SfaNI	GCATC	1 cut(s)	427
SfcI	CTRYAG	3 cut(s)	364, 930, 1271
Sfr303I	CCGCGG	1 cut(s)	1230
SgrBI	CCGCGG	1 cut(s)	1230
SinI	GGWCC	2 cut(s)	648, 938
SmiMI	CAYNNNNRTG	1 cut(s)	1142
SphI	GCATGC	2 cut(s)	295, 901
Sse9I	AATT	4 cut(s)	217, 237, 1078, 1160
SseBI	AGGCCT	1 cut(s)	684
SsiI	CCGC	4 cut(s)	11, 422, 1227, 1229
SspMI	CTAG	4 cut(s)	956, 1055, 1068, 1279
SstI	GAGCTC	1 cut(s)	840
StuI	AGGCCT	1 cut(s)	684
StyD4I	CCNGG	4 cut(s)	41, 82, 621, 684
StyI	CCWWGG	2 cut(s)	573, 657
TaaI	ACNGT	5 cut(s)	275, 700, 1010, 1210, 1275
TaiI	ACGT	1 cut(s)	522
TaqI	TCGA	3 cut(s)	278, 757, 1043
TasI	AATT	4 cut(s)	217, 237, 1078, 1160
TatI	WGTACW	1 cut(s)	536
TauI	GCSGC	2 cut(s)	13, 1229
TfiI	GAWTC	3 cut(s)	345, 418, 637
Tru1I	TTAA	4 cut(s)	216, 320, 480, 551
Tru9I	TTAA	4 cut(s)	216, 320, 480, 551
TscAI	CASTG	4 cut(s)	190, 302, 319, 1215
TseFI	GTSAC	1 cut(s)	58
TseI	GCWGC	6 cut(s)	100, 103, 497, 506, 929, 932
Tsp45I	GTSAC	1 cut(s)	58
TspDTI	ATGAA	2 cut(s)	114, 838
TspRI	CASTG	4 cut(s)	190, 302, 319, 1215
VneI	GTGCAC	3 cut(s)	298, 714, 819
VpaK11BI	GGWCC	2 cut(s)	648, 938
XapI	RAATTY	2 cut(s)	237, 1078
XceI	RCATGY	5 cut(s)	295, 375, 537, 901, 1098
XmiI	GTMKAC	1 cut(s)	1270
XmnI	GAANNNNTTC	1 cut(s)	264
XspI	CTAG	4 cut(s)	956, 1055, 1068, 1279
ZraI	GACGTC	1 cut(s)	520
Zsp2I	ATGCAT	1 cut(s)	903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.