Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0007991

Physical Location & Seq

Genomic Coordinates Forward (+)

8909894 .. 8912132

Gene Structure 2239 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG103700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGCGAGTTTTGAGGGGAGGATTTCGTTTTCGTCCCTTCCTAAGATAGAGAAAAGCAATACCCAATTCCACTATGTTGATGATGACTTCATCGATGCCGAATGGCCTGTGCACGAAGGCGGAGGCGGTACGACTTACCCATCAGTTTCCAAAGCTGACAAGCGAGATTATTCGTATCAATTTCCCCCGGAATTTGATAGTTTTGGAGATGACACTGGATATGATTCTAGCCAGGAGCATTGTGGTTCTGGGGAGATGGATGGGCCGCCGGAGGTGAACTTGAAGAATGTGTTGACCGGGATGATTGCCATTGTGACTGGCCGGAACAAAGTTGCTCCCGGTGAAACACCTGAGCAGCAGCAGCAGCAGCAACCCACTTCGAATGTTTCATTTCTCGGTGCAGAAAAGAATGGTGATACTTACTTGCATTCCTCGGTTTACACGCCCAGTGCCCCGCCCCTTTTTGAGCCAGTTGCCTTTAATTATAGTGCATACAAGGAAATTTTGGAGGCTGAACCCCCTGAATGGCTTCCTGACAGTTCAAGTATAGTTTGCATGCAGTGCACTTCTCCTTTCACTGCCTTAACTCGTGGGAGACATCATTGCCGATTCTGTGGTGGGATTTTCTGCAGAACATGTAGTAAAGGAAGGTGCTTGTTGCCTGTCAAGTTTAGGGAGAGGAATCCGCAGAGGGTCTGTGATGCCTGCTATGACAGGTTGGATCCTTTGCAGGGTATTCTTATTAACAGCATTAGCAATGCTGCACAAGCAGCAAAGCATGACGTCATGGATTGGACATGTACAAGAGGATGGTTAAATCTTCCTGTTGGTTTCTCCATGGAACAAGAGATATACAAAGCAACCAACACATTGAGAAATTACTCCCAGGTTTCTAGGCTGAATCCGGAGAGGTCCATACCCTTGGCTGTTCTCAAAGGAGCCAAAGGCCTGGCAATTCTAACCGTTGCTAAAGCTGGTGCACTACTTTCTTACAAACTTGGTACTGGTTTGGTGGTTTCTCGAAGGTCAGATGGATCATGGTCTGCTCCATCAGCCATATGTTCTGTTGGCTTAGGATGGGGTGCACAGATTGGGGGTGAGCTCATGGACTTCATCATTGTCCTTCCTGATATAAAAGCTGTGAAAACCTTTTGTAGTCGCATGCATTTCTCTCTTGGTGCTGGGTGTAGTGCTGCAGCAGGACCTATTGGTAGAGTGCTAGAAGCAGATATGCGTGCTGGAGACAGGGGTTCTGGAATGTGCTATACATACAGTTGTAGCAAAGGTGCATTTGTAGGAGTATCATTAGAAGGAAATGTTGTTGCCACAAGGATGGATACAAATCTTCAATTTTATGGCGACCCTTACCTGACGACTAATGATATACTTCTTGGGACAGTGGAAAGACCAAAGGCCGCGGAGCCCCTGTATGGGGCCCTTCAATCCCTCTACTCCAGTCTACAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001726 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005886 GO:0005938 GO:0006810 GO:0006897 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0008289 GO:0009987 GO:0015629 GO:0016020 GO:0016043 GO:0016192 GO:0022607 GO:0030029 GO:0030036 GO:0030479 GO:0030863 GO:0030864 GO:0031252 GO:0031253 GO:0031256 GO:0031344 GO:0032587 GO:0035091 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044463 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051015 GO:0051017 GO:0051128 GO:0051179 GO:0051234 GO:0051641 GO:0051666 GO:0060491 GO:0061572 GO:0061645 GO:0065007 GO:0071840 GO:0071944 GO:0097435 GO:0098590 GO:0098657 GO:0099568 GO:0120025 GO:0120032 GO:0120035 GO:0120038 GO:1900027

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FYVE Ysc84

Protein Analysis

489

Amino Acids

53.11

Weight (kDa)

5.71

Isoelectric Point (pI)

41.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	175 - 240	2e-20	FYVE zinc finger
Ysc84	PF04366	357 - 482	3.3e-38	Las17-binding protein actin regulator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43230
fragaria_vesca	FvH4_1g09450 FvH4_1g09450
malus_domestica	MD02G1102900.v1.1 MD15G1224000.v1.1
prunus_persica	Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1 Prupe.7G191500_v2.0.a1
pyrus_communis	pycom02g08060 pycom15g19820
rosa_chinensis	RchiOBHm_Chr2g0096001 RchiOBHm_Chr2g0096261
rosa_laevigata	RLG00000016616 RLG00000016630
rosa_multiflora	Rmu_co8311399.1_g000001 Rmu_sc0002497.1_g000013
rosa_roxburghii	Rroxscaffold_2G00145870
rosa_rugosa	Rorug02G0055800
rosa_samantha	Rh2AG103700 Rh2BG105200 Rh2CG107700 Rh2DG105600
rosa_wichuraiana	Rw2G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	786
AccI	GTMKAC	1 cut(s)	1459
AccII	CGCG	1 cut(s)	1418
AccIII	TCCGGA	1 cut(s)	904
AciI	CCGC	7 cut(s)	120, 126, 266, 455, 686, 1416, 1418
AclWI	GGATC	3 cut(s)	716, 729, 1042
AcoI	YGGCCR	1 cut(s)	319
AcsI	RAATTY	2 cut(s)	191, 501
AcyI	GRCGYC	1 cut(s)	783
AfaI	GTAC	3 cut(s)	130, 802, 1003
AfiI	CCNNNNNNNGG	5 cut(s)	525, 731, 1430, 1431, 1432
AflIII	ACRYGT	2 cut(s)	635, 797
AgsI	TTSAA	4 cut(s)	283, 543, 1349, 1442
AjnI	CCWGG	3 cut(s)	231, 885, 948
AluBI	AGCT	4 cut(s)	155, 974, 1102, 1139
AluI	AGCT	4 cut(s)	155, 974, 1102, 1139
Alw21I	GWGCWC	5 cut(s)	114, 566, 982, 1087, 1104
Alw26I	GTCTC	2 cut(s)	589, 1236
Alw44I	GTGCAC	4 cut(s)	110, 562, 978, 1083
AlwI	GGATC	3 cut(s)	716, 729, 1042
Aor13HI	TCCGGA	1 cut(s)	904
AoxI	GGCC	6 cut(s)	104, 263, 319, 946, 1413, 1434
ApaI	GGGCCC	1 cut(s)	1438
ApaLI	GTGCAC	4 cut(s)	110, 562, 978, 1083
ApeKI	GCWGC	9 cut(s)	355, 358, 361, 364, 367, 761, 770, 1193, 1196
ApoI	RAATTY	2 cut(s)	191, 501
Asp700I	GAANNNNTTC	1 cut(s)	528
AspS9I	GGNCC	5 cut(s)	263, 912, 1202, 1434, 1435
AsuC2I	CCSGG	3 cut(s)	188, 298, 339
AsuHPI	GGTGA	4 cut(s)	286, 353, 425, 1109
AsuII	TTCGAA	1 cut(s)	380
AvaII	GGWCC	2 cut(s)	912, 1202
BaeGI	GKGCMC	6 cut(s)	114, 454, 566, 982, 1087, 1438
BamHI	GGATCC	1 cut(s)	721
BanII	GRGCYC	3 cut(s)	1104, 1425, 1438
BauI	CACGAG	1 cut(s)	588
Bbv12I	GWGCWC	5 cut(s)	114, 566, 982, 1087, 1104
BbvI	GCAGC	9 cut(s)	367, 370, 373, 376, 379, 748, 782, 1180, 1208
BccI	CCATC	8 cut(s)	148, 250, 254, 804, 1025, 1057, 1071, 1327
BciT130I	CCWGG	3 cut(s)	233, 887, 950
BciVI	GTATCC	1 cut(s)	1330
BcnI	CCSGG	3 cut(s)	188, 298, 339
BcoDI	GTCTC	2 cut(s)	589, 1236
BfaI	CTAG	4 cut(s)	228, 894, 1220, 1468
BfmI	CTRYAG	3 cut(s)	628, 1194, 1460
BfuI	GTATCC	1 cut(s)	1330
Bme1390I	CCNGG	6 cut(s)	188, 233, 298, 339, 887, 950
Bme18I	GGWCC	2 cut(s)	912, 1202
BmgT120I	GGNCC	5 cut(s)	263, 912, 1202, 1434, 1435
BmiI	GGNNCC	5 cut(s)	723, 940, 1422, 1435, 1436
BmrFI	CCNGG	6 cut(s)	188, 233, 298, 339, 887, 950
BmrI	ACTGGG	1 cut(s)	441
BmsI	GCATC	2 cut(s)	85, 691
BmuI	ACTGGG	1 cut(s)	441
BpmI	CTGGAG	2 cut(s)	1260, 1438
Bpu10I	CCTNAGC	2 cut(s)	351, 1072
Bpu14I	TTCGAA	1 cut(s)	380
BpuMI	CCSGG	3 cut(s)	188, 298, 339
Bsa29I	ATCGAT	1 cut(s)	93
BsaBI	GATNNNNATC	1 cut(s)	1341
BsaHI	GRCGYC	1 cut(s)	783
BsaJI	CCNNGG	6 cut(s)	186, 432, 837, 885, 921, 1416
BsaWI	WCCGGW	1 cut(s)	904
BsaXI	ACNNNNNCTCC	2 cut(s)	1412, 1442
Bsc4I	CCNNNNNNNGG	5 cut(s)	525, 731, 1430, 1431, 1432
Bse1I	ACTGG	6 cut(s)	220, 322, 447, 470, 1009, 1455
Bse3DI	GCAATG	2 cut(s)	601, 763
Bse8I	GATNNNNATC	1 cut(s)	1341
BseAI	TCCGGA	1 cut(s)	904
BseBI	CCWGG	3 cut(s)	233, 887, 950
BseCI	ATCGAT	1 cut(s)	93
BseDI	CCNNGG	6 cut(s)	186, 432, 837, 885, 921, 1416
BseGI	GGATG	5 cut(s)	265, 306, 815, 1082, 1338
BseJI	GATNNNNATC	1 cut(s)	1341
BseLI	CCNNNNNNNGG	5 cut(s)	525, 731, 1430, 1431, 1432
BseMI	GCAATG	2 cut(s)	601, 763
BseMII	CTCAG	1 cut(s)	342
BseNI	ACTGG	6 cut(s)	220, 322, 447, 470, 1009, 1455
BseSI	GKGCMC	6 cut(s)	114, 454, 566, 982, 1087, 1438
BseXI	GCAGC	9 cut(s)	367, 370, 373, 376, 379, 748, 782, 1180, 1208
BseYI	CCCAGC	1 cut(s)	1181
BsgI	GTGCAG	2 cut(s)	420, 747
Bsh1236I	CGCG	1 cut(s)	1418
BshFI	GGCC	6 cut(s)	106, 265, 321, 948, 1415, 1436
BshVI	ATCGAT	1 cut(s)	93
BsiHKAI	GWGCWC	5 cut(s)	114, 566, 982, 1087, 1104
BsiSI	CCGG	6 cut(s)	188, 269, 297, 322, 339, 905
BslFI	GGGAC	2 cut(s)	19, 1408
BslI	CCNNNNNNNGG	5 cut(s)	525, 731, 1430, 1431, 1432
BsmAI	GTCTC	2 cut(s)	589, 1236
BsmFI	GGGAC	2 cut(s)	19, 1408
BsmI	GAATGC	1 cut(s)	427
BsnI	GGCC	6 cut(s)	106, 265, 321, 948, 1415, 1436
Bsp119I	TTCGAA	1 cut(s)	380
Bsp120I	GGGCCC	1 cut(s)	1434
Bsp1286I	GDGCHC	8 cut(s)	114, 454, 566, 982, 1087, 1104, 1425, 1438
Bsp13I	TCCGGA	1 cut(s)	904
Bsp1407I	TGTACA	1 cut(s)	800
Bsp143I	GATC	2 cut(s)	721, 1034
Bsp19I	CCATGG	1 cut(s)	837
BspACI	CCGC	7 cut(s)	120, 126, 266, 455, 686, 1416, 1418
BspANI	GGCC	6 cut(s)	106, 265, 321, 948, 1415, 1436
BspCNI	CTCAG	1 cut(s)	343
BspDI	ATCGAT	1 cut(s)	93
BspEI	TCCGGA	1 cut(s)	904
BspFNI	CGCG	1 cut(s)	1418
BspLI	GGNNCC	5 cut(s)	723, 940, 1422, 1435, 1436
BspMAI	CTGCAG	2 cut(s)	632, 1198
BspPI	GGATC	3 cut(s)	716, 729, 1042
BspT104I	TTCGAA	1 cut(s)	380
BsrDI	GCAATG	2 cut(s)	601, 763
BsrGI	TGTACA	1 cut(s)	800
BsrI	ACTGG	6 cut(s)	220, 322, 447, 470, 1009, 1455
BssECI	CCNNGG	6 cut(s)	186, 432, 837, 885, 921, 1416
BssMI	GATC	2 cut(s)	721, 1034
BssNI	GRCGYC	1 cut(s)	783
BssSI	CACGAG	1 cut(s)	588
BssT1I	CCWWGG	2 cut(s)	837, 921
Bst2BI	CACGAG	1 cut(s)	588
Bst2UI	CCWGG	3 cut(s)	233, 887, 950
Bst4CI	ACNGT	5 cut(s)	539, 964, 1274, 1399, 1464
BstACI	GRCGYC	1 cut(s)	783
BstAPI	GCANNNNNTGC	1 cut(s)	561
BstAUI	TGTACA	1 cut(s)	800
BstBI	TTCGAA	1 cut(s)	380
BstC8I	GCNNGC	4 cut(s)	557, 706, 1163, 1236
BstDEI	CTNAG	3 cut(s)	42, 351, 1072
BstDSI	CCRYGG	2 cut(s)	837, 1416
BstF5I	GGATG	5 cut(s)	265, 306, 815, 1082, 1338
BstFNI	CGCG	1 cut(s)	1418
BstKTI	GATC	2 cut(s)	724, 1037
BstMAI	GTCTC	2 cut(s)	589, 1236
BstMBI	GATC	2 cut(s)	721, 1034
BstMWI	GCNNNNNNNGC	7 cut(s)	361, 364, 367, 561, 767, 770, 1052
BstNI	CCWGG	3 cut(s)	233, 887, 950
BstNSI	RCATGY	4 cut(s)	559, 639, 801, 1165
BstSCI	CCNGG	6 cut(s)	186, 231, 296, 337, 885, 948
BstSFI	CTRYAG	3 cut(s)	628, 1194, 1460
BstSLI	GKGCMC	6 cut(s)	114, 454, 566, 982, 1087, 1438
BstUI	CGCG	1 cut(s)	1418
BstV1I	GCAGC	9 cut(s)	367, 370, 373, 376, 379, 748, 782, 1180, 1208
BstX2I	RGATCY	1 cut(s)	721
BstXI	CCANNNNNNTGG	3 cut(s)	922, 949, 1333
BstYI	RGATCY	1 cut(s)	721
Bsu15I	ATCGAT	1 cut(s)	93
BsuI	GTATCC	1 cut(s)	1330
BsuRI	GGCC	6 cut(s)	106, 265, 321, 948, 1415, 1436
BsuTUI	ATCGAT	1 cut(s)	93
BtgI	CCRYGG	2 cut(s)	837, 1416
BtsCI	GGATG	5 cut(s)	265, 306, 815, 1082, 1338
BtsI	GCAGTG	2 cut(s)	566, 576
BtsIMutI	CAGTG	5 cut(s)	213, 454, 566, 576, 1404
Cac8I	GCNNGC	4 cut(s)	557, 706, 1163, 1236
Cfr13I	GGNCC	5 cut(s)	263, 912, 1202, 1434, 1435
Cfr42I	CCGCGG	1 cut(s)	1419
ClaI	ATCGAT	1 cut(s)	93
Csp6I	GTAC	3 cut(s)	129, 801, 1002
CviAII	CATG	9 cut(s)	556, 636, 779, 787, 798, 838, 1038, 1105, 1162
CviQI	GTAC	3 cut(s)	129, 801, 1002
DdeI	CTNAG	3 cut(s)	42, 351, 1072
DpnI	GATC	2 cut(s)	723, 1036
DpnII	GATC	2 cut(s)	721, 1034
EaeI	YGGCCR	1 cut(s)	319
EciI	GGCGGA	1 cut(s)	135
Ecl136II	GAGCTC	1 cut(s)	1102
Eco130I	CCWWGG	2 cut(s)	837, 921
Eco147I	AGGCCT	1 cut(s)	948
Eco24I	GRGCYC	3 cut(s)	1104, 1425, 1438
Eco47I	GGWCC	2 cut(s)	912, 1202
Eco53kI	GAGCTC	1 cut(s)	1102
EcoICRI	GAGCTC	1 cut(s)	1102
EcoO109I	RGGNCCY	3 cut(s)	1202, 1434, 1435
EcoRII	CCWGG	3 cut(s)	231, 885, 948
EcoT14I	CCWWGG	2 cut(s)	837, 921
EcoT22I	ATGCAT	1 cut(s)	1167
EcoT38I	GRGCYC	3 cut(s)	1104, 1425, 1438
ErhI	CCWWGG	2 cut(s)	837, 921
FaeI	CATG	9 cut(s)	559, 639, 782, 790, 801, 841, 1041, 1108, 1165
FaqI	GGGAC	2 cut(s)	19, 1408
FatI	CATG	9 cut(s)	555, 635, 778, 786, 797, 837, 1037, 1104, 1161
FauI	CCCGC	1 cut(s)	462
FauNDI	CATATG	1 cut(s)	1058
FblI	GTMKAC	1 cut(s)	1459
FokI	GGATG	5 cut(s)	272, 313, 822, 1089, 1345
FriOI	GRGCYC	3 cut(s)	1104, 1425, 1438
FspBI	CTAG	4 cut(s)	228, 894, 1220, 1468
GsaI	CCCAGC	1 cut(s)	1185
GsuI	CTGGAG	2 cut(s)	1260, 1438
HaeIII	GGCC	6 cut(s)	106, 265, 321, 948, 1415, 1436
HapII	CCGG	6 cut(s)	188, 269, 297, 322, 339, 905
Hin1I	GRCGYC	1 cut(s)	783
Hin1II	CATG	9 cut(s)	559, 639, 782, 790, 801, 841, 1041, 1108, 1165
HincII	GTYRAC	1 cut(s)	294
HindII	GTYRAC	1 cut(s)	294
HinfI	GANTC	4 cut(s)	224, 609, 682, 901
HpaII	CCGG	6 cut(s)	188, 269, 297, 322, 339, 905
HphI	GGTGA	4 cut(s)	286, 353, 425, 1109
Hpy166II	GTNNAC	8 cut(s)	112, 277, 294, 439, 564, 980, 1085, 1460
Hpy188I	TCNGA	1 cut(s)	1030
Hpy188III	TCNNGA	5 cut(s)	533, 905, 1020, 1127, 1254
Hpy8I	GTNNAC	8 cut(s)	112, 277, 294, 439, 564, 980, 1085, 1460
HpyAV	CCTTC	7 cut(s)	47, 110, 642, 1017, 1133, 1304, 1448
HpyCH4III	ACNGT	5 cut(s)	539, 964, 1274, 1399, 1464
HpyCH4IV	ACGT	1 cut(s)	783
HpyF10VI	GCNNNNNNNGC	7 cut(s)	361, 364, 367, 561, 767, 770, 1052
HpyF3I	CTNAG	3 cut(s)	42, 351, 1072
HpySE526I	ACGT	1 cut(s)	783
Hsp92I	GRCGYC	1 cut(s)	783
Hsp92II	CATG	9 cut(s)	559, 639, 782, 790, 801, 841, 1041, 1108, 1165
Kpn2I	TCCGGA	1 cut(s)	904
KspI	CCGCGG	1 cut(s)	1419
Kzo9I	GATC	2 cut(s)	721, 1034
LmnI	GCTCC	5 cut(s)	235, 340, 938, 1051, 1420
Lsp1109I	GCAGC	9 cut(s)	367, 370, 373, 376, 379, 748, 782, 1180, 1208
LweI	GCATC	2 cut(s)	85, 691
MaeI	CTAG	4 cut(s)	228, 894, 1220, 1468
MaeII	ACGT	1 cut(s)	783
MaeIII	GTNAC	1 cut(s)	313
MalI	GATC	2 cut(s)	723, 1036
MboI	GATC	2 cut(s)	721, 1034
MboII	GAAGA	3 cut(s)	295, 812, 1337
MflI	RGATCY	1 cut(s)	721
MhlI	GDGCHC	8 cut(s)	114, 454, 566, 982, 1087, 1104, 1425, 1438
MluCI	AATT	8 cut(s)	65, 179, 191, 481, 501, 877, 954, 1349
MmeI	TCCRAC	1 cut(s)	699
Mph1103I	ATGCAT	1 cut(s)	1167
MroI	TCCGGA	1 cut(s)	904
MroXI	GAANNNNTTC	1 cut(s)	528
MseI	TTAA	4 cut(s)	480, 584, 744, 815
MslI	CAYNNNNRTG	1 cut(s)	1331
MspA1I	CMGCKG	1 cut(s)	1418
MspI	CCGG	6 cut(s)	188, 269, 297, 322, 339, 905
MspR9I	CCNGG	6 cut(s)	188, 233, 298, 339, 887, 950
Mva1269I	GAATGC	1 cut(s)	427
MvaI	CCWGG	3 cut(s)	233, 887, 950
MvnI	CGCG	1 cut(s)	1418
MwoI	GCNNNNNNNGC	7 cut(s)	361, 364, 367, 561, 767, 770, 1052
NciI	CCSGG	3 cut(s)	188, 298, 339
NcoI	CCATGG	1 cut(s)	837
NdeI	CATATG	1 cut(s)	1058
NdeII	GATC	2 cut(s)	721, 1034
NlaIII	CATG	9 cut(s)	559, 639, 782, 790, 801, 841, 1041, 1108, 1165
NlaIV	GGNNCC	5 cut(s)	723, 940, 1422, 1435, 1436
NmuCI	GTSAC	1 cut(s)	313
NsiI	ATGCAT	1 cut(s)	1167
NspI	RCATGY	4 cut(s)	559, 639, 801, 1165
NspV	TTCGAA	1 cut(s)	380
PaeI	GCATGC	2 cut(s)	559, 1165
PceI	AGGCCT	1 cut(s)	948
PciI	ACATGT	2 cut(s)	635, 797
PctI	GAATGC	1 cut(s)	427
PdmI	GAANNNNTTC	1 cut(s)	528
PfeI	GAWTC	4 cut(s)	224, 609, 682, 901
PpuMI	RGGWCCY	1 cut(s)	1202
PscI	ACATGT	2 cut(s)	635, 797
Psp124BI	GAGCTC	1 cut(s)	1104
Psp5II	RGGWCCY	1 cut(s)	1202
Psp6I	CCWGG	3 cut(s)	231, 885, 948
PspFI	CCCAGC	1 cut(s)	1181
PspGI	CCWGG	3 cut(s)	231, 885, 948
PspN4I	GGNNCC	5 cut(s)	723, 940, 1422, 1435, 1436
PspOMI	GGGCCC	1 cut(s)	1434
PspPI	GGNCC	5 cut(s)	263, 912, 1202, 1434, 1435
PspPPI	RGGWCCY	1 cut(s)	1202
PstI	CTGCAG	2 cut(s)	632, 1198
PsuI	RGATCY	1 cut(s)	721
RsaI	GTAC	3 cut(s)	130, 802, 1003
RsaNI	GTAC	3 cut(s)	129, 801, 1002
RseI	CAYNNNNRTG	1 cut(s)	1331
SacI	GAGCTC	1 cut(s)	1104
SacII	CCGCGG	1 cut(s)	1419
SaqAI	TTAA	4 cut(s)	480, 584, 744, 815
Sau3AI	GATC	2 cut(s)	721, 1034
Sau96I	GGNCC	5 cut(s)	263, 912, 1202, 1434, 1435
ScrFI	CCNGG	6 cut(s)	188, 233, 298, 339, 887, 950
SduI	GDGCHC	8 cut(s)	114, 454, 566, 982, 1087, 1104, 1425, 1438
SfaNI	GCATC	2 cut(s)	85, 691
SfcI	CTRYAG	3 cut(s)	628, 1194, 1460
Sfr303I	CCGCGG	1 cut(s)	1419
SfuI	TTCGAA	1 cut(s)	380
SgrBI	CCGCGG	1 cut(s)	1419
SinI	GGWCC	2 cut(s)	912, 1202
SmiMI	CAYNNNNRTG	1 cut(s)	1331
SphI	GCATGC	2 cut(s)	559, 1165
Sse9I	AATT	8 cut(s)	65, 179, 191, 481, 501, 877, 954, 1349
SseBI	AGGCCT	1 cut(s)	948
SsiI	CCGC	7 cut(s)	120, 126, 266, 455, 686, 1416, 1418
SspMI	CTAG	4 cut(s)	228, 894, 1220, 1468
SstI	GAGCTC	1 cut(s)	1104
StuI	AGGCCT	1 cut(s)	948
StyD4I	CCNGG	6 cut(s)	186, 231, 296, 337, 885, 948
StyI	CCWWGG	2 cut(s)	837, 921
TaaI	ACNGT	5 cut(s)	539, 964, 1274, 1399, 1464
TaiI	ACGT	1 cut(s)	786
TaqI	TCGA	3 cut(s)	93, 380, 1021
TasI	AATT	8 cut(s)	65, 179, 191, 481, 501, 877, 954, 1349
TatI	WGTACW	1 cut(s)	800
TauI	GCSGC	2 cut(s)	268, 1418
TfiI	GAWTC	4 cut(s)	224, 609, 682, 901
Tru1I	TTAA	4 cut(s)	480, 584, 744, 815
Tru9I	TTAA	4 cut(s)	480, 584, 744, 815
TscAI	CASTG	5 cut(s)	220, 454, 566, 583, 1404
TseFI	GTSAC	1 cut(s)	313
TseI	GCWGC	9 cut(s)	355, 358, 361, 364, 367, 761, 770, 1193, 1196
Tsp45I	GTSAC	1 cut(s)	313
TspDTI	ATGAA	3 cut(s)	79, 378, 1102
TspRI	CASTG	5 cut(s)	220, 454, 566, 583, 1404
VneI	GTGCAC	4 cut(s)	110, 562, 978, 1083
VpaK11BI	GGWCC	2 cut(s)	912, 1202
XapI	RAATTY	2 cut(s)	191, 501
XceI	RCATGY	4 cut(s)	559, 639, 801, 1165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	239
XmiI	GTMKAC	1 cut(s)	1459
XmnI	GAANNNNTTC	1 cut(s)	528
XspI	CTAG	4 cut(s)	228, 894, 1220, 1468
ZraI	GACGTC	1 cut(s)	784
Zsp2I	ATGCAT	1 cut(s)	1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.