FvH4_1g15970

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0012566
Physical Location & Seq
Reverse (-)
9081988 .. 9084912
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g15970.t1

Sequence Viewer

Length: 2925 bp
ATGGGATTGTTTTTCCGGCTCCGGAACACTCTTCCTTCTCCTCCGGCGATAACCTCCTTTATCAGACACAAACACCATTCAATCAATCCCAAAGCCTCACACTTTCTCGGTCTGCTCAATCTCTGCCGAACCGGCGAGGACTTGAAACCCCTCAAGTCCTTTCTCTTTGCTCATGGACTCATCAACCATGTTTCTTTGTTAGAACAGTTCTTCAGGTCCTGTTTTCATCTGGGTGCTTCACAGTTAGCTATCTCTACATTCCAACAAATCAAAAGGCCAAGTCTTGGCTTGCAGAACCTGTTGATCAGGTGTCTTTGCAATCATGGCTTATACCAAGACCTTCTATGTGTGTACATGAAGTCTCGGCTTTCTGATGATTTCACATTTCCGTTTGTGATTAAGGCCTGTGCGGCTTTGGGAGATGCTAAGATTGGTAAAGAGGTTCATGGTGTTGTGATTAGAACTGGGTTTGAGCAGAACCTTGTGATACAGACTAGTTTGGTTGATTTATATGCAAGAACTGGGTGTGTGGAAGTTGCACGCCAAGTGATTGATATAATTCCCCAACCGGACTTGGTTCCTTGGAATGCATTGATAGCTGGTTATTCGTGGAATGGATTTGATTGGGAAGCCTTGAAGGTTTTCAGGAAGATTGTTTTCAGTGATTTGAAGCCGAATTTGAGCACTCTAGCTAGCATTGTTCCTGTTTGCACTCGTTTGGGGTGTGTTAATGCTGGTAAGTCTCTTCATTGCTTTGCTGTCAAGTCTGGATTCCTTTCGAATGATTTTCTGGTTCCTGCTTTGATTTCATTGTACGCTGGGGATGGGGATTTATGTGGTGCTAGAGACTTGTTTGATTCTGTAGGGGATAAGAGTATTGCTGTTTGGAATGCCATGATTTCCTCATACACACAAAGGCAAGAGCCTGTGTTAGCTTTTGAGTTGTTCCGGTTGATGCTGCTAGTTAACATAAGGCCTAATTTGGTCACTTTTGTGTCGATTATTCCCTCATTAGAGAGTTTCACTTGCCTTTCGTTGGGTGAGTCTATTCATGCTTGTGCAGTTAAACATGGATTAGAAAATCAGCTTCCGGTATTAACTGCCCTGGTGTCAATGTATGCCAAACTTGGCTGTATTGATGAATCCAGGTATCTTTTTGACCAGATGCCGAGTAAAAACCTTCTTTTGTGGAATTCAATGATTTCTGGGTACGTGCACAATGGGTTATGGGATTTAAGTCTGGGTGTGTTCCGTGATATGCAAGTTTCAAGAGTTGATGTGGATGCAGTCTCCATTATTAGTATTCTTTCTGCTTGCTCCAAACTTGAGGCTGATTTGTTGGGTAGGTCTGTCCATGCATTTAGTATTAGAAAGGGTATCCATTCAAACCTCAATCTGTCAAATGCATTGTTGGCGTTTTACTCTGATTGCCATCGTCTCTCCTACCCTATTAAGTTGTTTCACAAAATGCCTCTAAGAAATGCCATAACATGGAATACATTAATATCCGCTTGTGTGCATCATGGAGAACTGGAAGAAGCAGTTGCCTTGTACTACCAGATGCAGAAAGAGGGTTTCAAGTTGGACTTGGTCACCTTGACAAGCATACTCCCTGGTTGCAGTGACGAGGGAAACTTAGGGCAAGGAATGGCTTTTCATGGTTATGCAATAAAACACGGGTTTGCTTCTGACATTTCTCTGCTTAATTCACTTATTAGCATGTATTGTAACTGTGGAGACCTTCATGCTGGGAGGTTGGTTTTCGAAACCATGCCCGAAAAAAGTGTGGTATCTTGGAATGCTCTAATGACTGGCTTCAAGAATCATGATTTACAAAATGAGGTCATTGCCATCTTCAGCCAGATGATAAAGGATGATCAGAGACCAAATTATGTTACATTGCTAAATCTGTTGCCTGCATGCTACACCCGGTTACAAGGTAAGTCTATTCATGCTTTGGCCGTTAGAGCTGGTATTCTCCATGAAACCCCGCTTCTTTCATCACTCATGTTTATGTATGCCAGATTTGACAACCATGATTCATGTTTCTTACTGTTTCAAACAAGAAAAATAGAGGATATTTCTTTGTGGAATGCCATTATGTCAGTGCAAATACAGAGGAAAAGTAGCGAGAATGCAGTGGGATTTTTCACTAGCTTGCTTCGGATTGGATTGGAACCAGACAATGTGACCCTTTTGAATTTGGTTTCTGCATGTGCTCAACTGAATAGCCTCATTCTTTCTAGTTCTGTCATGAGTTACATCATTCGCAAGGGCTTTGACAAAGATCTGGCTATCAGCAATGCACTAATAGATTTGCATTCAAGATGTGGAAACATATGCACTGCGAGAAAGCTGTTTGATGAGTTGGTAAAGAGAGATTATGTGTCTTGGAGTGTGATGATTAATGGGTATGGCTTGAATGGGAATGGTGAAGCTGCTCTGGATCTTTTCTTGCAGATGAAGCTATCAGGGATGGCACCTAATGGGATTACTTATTTAAGTGTTTTATCAGCTTTCAGCCATTCTGGATTGGTGGAGCAAGGCCGTGCCGTTTTCAAATCTATGGCAGAACATGGGATAACACCCCAGATGAAGCACTATGCTTGCATGGTGGACCTTCTAGGAAGAACAGGTAATTTGACAGAGGCTTGTGACATTGTGAGGGGACTGCCCTGCAAACCTTCTACAAGCCTACTCGAGTCTCTGCTGGGTGCTTGCAGAATTCATGGGAGTGTTGAACTTGGAGAGAAAATTGCTGGGTTGCTCTCTGAATCGGACCCTGAAAATTCAAGACCACATGTAATGCTTCATAATATTTATGCAGCAGCTGGGAGGTGGACTGATGCTGATAGAGTAAGGTCTAGGATTGAAGAGAGAAGCTTGAGAAAAGTACCTGGATTTAGTCTTCTAATGGGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 WEMBL

Protein Analysis

975

Amino Acids

107.92

Weight (kDa)

8.13

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 292 - 335 1.6e-06 PPR repeat family
PPR PF01535 397 - 423 5.4e-06 PPR repeat
PPR_2 PF13041 494 - 541 7.4e-12 PPR repeat family
PPR PF01535 496 - 526 1e-08 PPR repeat
PPR_2 PF13041 794 - 841 2e-09 PPR repeat family
PPR PF01535 796 - 825 8.2e-07 PPR repeat
E_motif PF20431 910 - 969 5.1e-11 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2479
AccB7I CCANNNNNTGG 2 cut(s) 284, 1491
AccIII TCCGGA 1 cut(s) 21
AciI CCGC 3 cut(s) 410, 1509, 1991
AclWI GGATC 1 cut(s) 2454
AcoI YGGCCR 1 cut(s) 1959
AcsI RAATTY 5 cut(s) 676, 1192, 2200, 2724, 2788
AcuI CTGAAG 2 cut(s) 196, 1840
AfaI GTAC 5 cut(s) 353, 815, 1211, 1553, 2895
AfiI CCNNNNNNNGG 3 cut(s) 284, 1036, 1491
AflIII ACRYGT 1 cut(s) 2800
AhlI ACTAGT 1 cut(s) 494
AjnI CCWGG 4 cut(s) 1104, 1145, 1612, 2896
AleI CACNNNNGTG 1 cut(s) 992
Alw21I GWGCWC 3 cut(s) 686, 1218, 2221
Alw26I GTCTC 8 cut(s) 366, 747, 840, 1294, 1442, 1731, 1876, 2709
Alw44I GTGCAC 1 cut(s) 1214
AlwI GGATC 1 cut(s) 2454
AlwNI CAGNNNCTG 3 cut(s) 219, 298, 2831
Ama87I CYCGRG 1 cut(s) 2699
Aor13HI TCCGGA 1 cut(s) 21
AoxI GGCC 5 cut(s) 275, 402, 974, 1959, 2545
ApaLI GTGCAC 1 cut(s) 1214
ApeKI GCWGC 4 cut(s) 958, 2438, 2825, 2828
ApoI RAATTY 5 cut(s) 676, 1192, 2200, 2724, 2788
AseI ATTAAT 2 cut(s) 1502, 2406
Asp700I GAANNNNTTC 1 cut(s) 641
AspS9I GGNCC 3 cut(s) 216, 2617, 2779
AsuC2I CCSGG 1 cut(s) 1930
AsuHPI GGTGA 3 cut(s) 1052, 1585, 2444
AsuII TTCGAA 2 cut(s) 779, 1764
AsuNHI GCTAGC 1 cut(s) 692
AvaI CYCGRG 1 cut(s) 2699
AvaII GGWCC 3 cut(s) 216, 2617, 2779
BaeGI GKGCMC 1 cut(s) 1218
BanI GGYRCC 1 cut(s) 2479
BbsI GAAGAC 1 cut(s) 2900
Bbv12I GWGCWC 3 cut(s) 686, 1218, 2221
BbvI GCAGC 4 cut(s) 945, 2425, 2837, 2840
BccI CCATC 4 cut(s) 818, 1440, 1859, 2470
BceAI ACGGC 3 cut(s) 1946, 2532, 2537
BciT130I CCWGG 4 cut(s) 1106, 1147, 1614, 2898
BciVI GTATCC 1 cut(s) 1388
BclI TGATCA 2 cut(s) 303, 1876
BcnI CCSGG 1 cut(s) 1930
BcoDI GTCTC 8 cut(s) 366, 747, 840, 1294, 1442, 1731, 1876, 2709
BcuI ACTAGT 1 cut(s) 494
BfaI CTAG 9 cut(s) 495, 689, 693, 843, 962, 2154, 2244, 2624, 2865
BfmI CTRYAG 1 cut(s) 861
BfuI GTATCC 1 cut(s) 1388
BglI GCCNNNNNGGC 2 cut(s) 132, 410
BglII AGATCT 1 cut(s) 2287
BisI GCNGC 5 cut(s) 411, 959, 2439, 2826, 2829
BlsI GCNGC 5 cut(s) 412, 960, 2440, 2827, 2830
Bme1390I CCNGG 5 cut(s) 1106, 1147, 1614, 1930, 2898
Bme18I GGWCC 3 cut(s) 216, 2617, 2779
BmeT110I CYCGRG 1 cut(s) 2699
BmgT120I GGNCC 3 cut(s) 216, 2617, 2779
BmiI GGNNCC 6 cut(s) 20, 579, 795, 2178, 2481, 2781
BmrFI CCNGG 5 cut(s) 1106, 1147, 1614, 1930, 2898
BmrI ACTGGG 2 cut(s) 474, 531
BmsI GCATC 7 cut(s) 412, 945, 1155, 1273, 1528, 1551, 2836
BmtI GCTAGC 1 cut(s) 696
BmuI ACTGGG 2 cut(s) 474, 531
BpiI GAAGAC 1 cut(s) 2900
Bpu14I TTCGAA 2 cut(s) 779, 1764
BpuEI CTTGAG 3 cut(s) 137, 1346, 2905
BpuMI CCSGG 1 cut(s) 1930
BsaAI YACGTR 1 cut(s) 1213
BsaBI GATNNNNATC 1 cut(s) 1431
BsaI GGTCTC 2 cut(s) 1731, 1876
BsaJI CCNNGG 3 cut(s) 581, 1104, 1612
BsaWI WCCGGW 4 cut(s) 21, 568, 948, 1090
Bsc4I CCNNNNNNNGG 3 cut(s) 284, 1036, 1491
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 4 cut(s) 469, 526, 1536, 1816
Bse3DI GCAATG 4 cut(s) 748, 1845, 1898, 2308
Bse8I GATNNNNATC 1 cut(s) 1431
BseAI TCCGGA 1 cut(s) 21
BseBI CCWGG 4 cut(s) 1106, 1147, 1614, 2898
BseDI CCNNGG 3 cut(s) 581, 1104, 1612
BseGI GGATG 4 cut(s) 829, 1288, 1879, 2481
BseJI GATNNNNATC 1 cut(s) 1431
BseLI CCNNNNNNNGG 3 cut(s) 284, 1036, 1491
BseMI GCAATG 4 cut(s) 748, 1845, 1898, 2308
BseNI ACTGG 4 cut(s) 469, 526, 1536, 1816
BseRI GAGGAG 1 cut(s) 30
BseSI GKGCMC 1 cut(s) 1218
BseXI GCAGC 4 cut(s) 945, 2425, 2837, 2840
BseYI CCCAGC 5 cut(s) 818, 1748, 2710, 2759, 2831
BsgI GTGCAG 1 cut(s) 1080
BshFI GGCC 5 cut(s) 277, 404, 976, 1961, 2547
BshNI GGYRCC 1 cut(s) 2479
BsiHKAI GWGCWC 3 cut(s) 686, 1218, 2221
BsiHKCI CYCGRG 1 cut(s) 2699
BsiSI CCGG 8 cut(s) 16, 22, 44, 132, 569, 949, 1091, 1930
BslFI GGGAC 1 cut(s) 2682
BslI CCNNNNNNNGG 3 cut(s) 284, 1036, 1491
BsmAI GTCTC 8 cut(s) 366, 747, 840, 1294, 1442, 1731, 1876, 2709
BsmBI CGTCTC 1 cut(s) 1442
BsmFI GGGAC 1 cut(s) 2682
BsmI GAATGC 6 cut(s) 592, 895, 1804, 2098, 2140, 2320
BsnI GGCC 5 cut(s) 277, 404, 976, 1961, 2547
Bso31I GGTCTC 2 cut(s) 1731, 1876
BsoBI CYCGRG 1 cut(s) 2699
Bsp119I TTCGAA 2 cut(s) 779, 1764
Bsp1286I GDGCHC 3 cut(s) 686, 1218, 2221
Bsp13I TCCGGA 1 cut(s) 21
Bsp1407I TGTACA 1 cut(s) 351
Bsp143I GATC 4 cut(s) 303, 1876, 2287, 2446
BspACI CCGC 3 cut(s) 410, 1509, 1991
BspANI GGCC 5 cut(s) 277, 404, 976, 1961, 2547
BspEI TCCGGA 1 cut(s) 21
BspHI TCATGA 2 cut(s) 1825, 2253
BspLI GGNNCC 6 cut(s) 20, 579, 795, 2178, 2481, 2781
BspOI GCTAGC 1 cut(s) 696
BspPI GGATC 1 cut(s) 2454
BspT104I TTCGAA 2 cut(s) 779, 1764
BspT107I GGYRCC 1 cut(s) 2479
BspTNI GGTCTC 2 cut(s) 1731, 1876
BsrDI GCAATG 4 cut(s) 748, 1845, 1898, 2308
BsrFI RCCGGY 1 cut(s) 131
BsrGI TGTACA 1 cut(s) 351
BsrI ACTGG 4 cut(s) 469, 526, 1536, 1816
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 3 cut(s) 581, 1104, 1612
BssMI GATC 4 cut(s) 303, 1876, 2287, 2446
BssT1I CCWWGG 1 cut(s) 581
Bst2UI CCWGG 4 cut(s) 1106, 1147, 1614, 2898
Bst4CI ACNGT 4 cut(s) 207, 243, 1733, 2055
Bst6I CTCTTC 3 cut(s) 36, 750, 2868
BstAUI TGTACA 1 cut(s) 351
BstBAI YACGTR 1 cut(s) 1213
BstBI TTCGAA 2 cut(s) 779, 1764
BstC8I GCNNGC 9 cut(s) 290, 541, 694, 1315, 1917, 1921, 2159, 2608, 2719
BstDEI CTNAG 3 cut(s) 426, 1475, 1636
BstEII GGTNACC 1 cut(s) 1591
BstF5I GGATG 4 cut(s) 829, 1288, 1879, 2481
BstKTI GATC 4 cut(s) 306, 1879, 2290, 2449
BstMAI GTCTC 8 cut(s) 366, 747, 840, 1294, 1442, 1731, 1876, 2709
BstMBI GATC 4 cut(s) 303, 1876, 2287, 2446
BstMWI GCNNNNNNNGC 7 cut(s) 132, 324, 410, 596, 1412, 1967, 2464
BstNI CCWGG 4 cut(s) 1106, 1147, 1614, 2898
BstNSI RCATGY 4 cut(s) 1723, 1923, 2217, 2804
BstPI GGTNACC 1 cut(s) 1591
BstSCI CCNGG 5 cut(s) 1104, 1145, 1612, 1928, 2896
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 1 cut(s) 1218
BstV1I GCAGC 4 cut(s) 945, 2425, 2837, 2840
BstV2I GAAGAC 1 cut(s) 2900
BstX2I RGATCY 2 cut(s) 2287, 2446
BstYI RGATCY 2 cut(s) 2287, 2446
BsuI GTATCC 1 cut(s) 1388
BsuRI GGCC 5 cut(s) 277, 404, 976, 1961, 2547
BtsCI GGATG 4 cut(s) 829, 1288, 1879, 2481
BtsI GCAGTG 3 cut(s) 1627, 2145, 2343
BtsIMutI CAGTG 5 cut(s) 667, 1627, 2112, 2145, 2343
Cac8I GCNNGC 9 cut(s) 290, 541, 694, 1315, 1917, 1921, 2159, 2608, 2719
CaiI CAGNNNCTG 3 cut(s) 219, 298, 2831
CciI TCATGA 2 cut(s) 1825, 2253
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 216, 2617, 2779
Csp6I GTAC 5 cut(s) 352, 814, 1210, 1552, 2894
CviQI GTAC 5 cut(s) 352, 814, 1210, 1552, 2894
DdeI CTNAG 3 cut(s) 426, 1475, 1636
DpnI GATC 4 cut(s) 305, 1878, 2289, 2448
DpnII GATC 4 cut(s) 303, 1876, 2287, 2446
EaeI YGGCCR 1 cut(s) 1959
Eam1104I CTCTTC 3 cut(s) 36, 750, 2868
EarI CTCTTC 3 cut(s) 36, 750, 2868
Eco130I CCWWGG 1 cut(s) 581
Eco147I AGGCCT 2 cut(s) 404, 976
Eco31I GGTCTC 2 cut(s) 1731, 1876
Eco47I GGWCC 3 cut(s) 216, 2617, 2779
Eco57I CTGAAG 2 cut(s) 196, 1840
Eco88I CYCGRG 1 cut(s) 2699
Eco91I GGTNACC 1 cut(s) 1591
EcoO109I RGGNCCY 1 cut(s) 216
EcoO65I GGTNACC 1 cut(s) 1591
EcoRI GAATTC 2 cut(s) 1192, 2724
EcoRII CCWGG 4 cut(s) 1104, 1145, 1612, 2896
EcoT14I CCWWGG 1 cut(s) 581
EcoT22I ATGCAT 3 cut(s) 592, 1360, 1408
ErhI CCWWGG 1 cut(s) 581
Esp3I CGTCTC 1 cut(s) 1442
FalI AAGNNNNNCTT 2 cut(s) 1571, 1603
FaqI GGGAC 1 cut(s) 2682
FauI CCCGC 1 cut(s) 1998
FauNDI CATATG 1 cut(s) 2339
FbaI TGATCA 2 cut(s) 303, 1876
Fnu4HI GCNGC 5 cut(s) 411, 959, 2439, 2826, 2829
FokI GGATG 4 cut(s) 836, 1295, 1886, 2488
Fsp4HI GCNGC 5 cut(s) 411, 959, 2439, 2826, 2829
FspBI CTAG 9 cut(s) 495, 689, 693, 843, 962, 2154, 2244, 2624, 2865
GluI GCNGC 5 cut(s) 411, 959, 2439, 2826, 2829
GsaI CCCAGC 5 cut(s) 822, 1752, 2714, 2763, 2835
HaeIII GGCC 5 cut(s) 277, 404, 976, 1961, 2547
HapII CCGG 8 cut(s) 16, 22, 44, 132, 569, 949, 1091, 1930
HincII GTYRAC 1 cut(s) 967
HindII GTYRAC 1 cut(s) 967
HindIII AAGCTT 1 cut(s) 2881
HinfI GANTC 9 cut(s) 177, 771, 857, 1043, 1142, 1822, 2039, 2702, 2774
HpaI GTTAAC 1 cut(s) 967
HpaII CCGG 8 cut(s) 16, 22, 44, 132, 569, 949, 1091, 1930
HphI GGTGA 3 cut(s) 1052, 1585, 2444
Hpy166II GTNNAC 5 cut(s) 352, 967, 1216, 2617, 2841
Hpy188I TCNGA 8 cut(s) 65, 373, 1426, 1690, 1881, 2166, 2773, 2779
Hpy8I GTNNAC 5 cut(s) 352, 967, 1216, 2617, 2841
HpyAV CCTTC 7 cut(s) 45, 350, 631, 1190, 1751, 2630, 2694
HpyCH4III ACNGT 4 cut(s) 207, 243, 1733, 2055
HpyCH4IV ACGT 1 cut(s) 1212
HpyF10VI GCNNNNNNNGC 7 cut(s) 132, 324, 410, 596, 1412, 1967, 2464
HpyF3I CTNAG 3 cut(s) 426, 1475, 1636
HpySE526I ACGT 1 cut(s) 1212
Kpn2I TCCGGA 1 cut(s) 21
Ksp22I TGATCA 2 cut(s) 303, 1876
KspAI GTTAAC 1 cut(s) 967
Kzo9I GATC 4 cut(s) 303, 1876, 2287, 2446
LmnI GCTCC 3 cut(s) 24, 1322, 2539
Lsp1109I GCAGC 4 cut(s) 945, 2425, 2837, 2840
LweI GCATC 7 cut(s) 412, 945, 1155, 1273, 1528, 1551, 2836
MaeI CTAG 9 cut(s) 495, 689, 693, 843, 962, 2154, 2244, 2624, 2865
MaeII ACGT 1 cut(s) 1212
MaeIII GTNAC 9 cut(s) 985, 1591, 1622, 1727, 1894, 1932, 2188, 2258, 2654
MalI GATC 4 cut(s) 305, 1878, 2289, 2448
MboI GATC 4 cut(s) 303, 1876, 2287, 2446
MboII GAAGA 9 cut(s) 23, 202, 661, 737, 1547, 1846, 2640, 2885, 2900
MflI RGATCY 2 cut(s) 2287, 2446
MhlI GDGCHC 3 cut(s) 686, 1218, 2221
MlyI GAGTC 3 cut(s) 171, 1052, 2711
MmeI TCCRAC 2 cut(s) 286, 1563
Mph1103I ATGCAT 3 cut(s) 592, 1360, 1408
MroI TCCGGA 1 cut(s) 21
MroXI GAANNNNTTC 1 cut(s) 641
MslI CAYNNNNRTG 6 cut(s) 231, 992, 1056, 1662, 2012, 2733
MspA1I CMGCKG 1 cut(s) 2831
MspI CCGG 8 cut(s) 16, 22, 44, 132, 569, 949, 1091, 1930
MspR9I CCNGG 5 cut(s) 1106, 1147, 1614, 1930, 2898
Mva1269I GAATGC 6 cut(s) 592, 895, 1804, 2098, 2140, 2320
MvaI CCWGG 4 cut(s) 1106, 1147, 1614, 2898
MwoI GCNNNNNNNGC 7 cut(s) 132, 324, 410, 596, 1412, 1967, 2464
NciI CCSGG 1 cut(s) 1930
NdeI CATATG 1 cut(s) 2339
NdeII GATC 4 cut(s) 303, 1876, 2287, 2446
NheI GCTAGC 1 cut(s) 692
NlaIV GGNNCC 6 cut(s) 20, 579, 795, 2178, 2481, 2781
NmeAIII GCCGAG 2 cut(s) 343, 1194
NmuCI GTSAC 5 cut(s) 985, 1591, 1622, 2188, 2654
NsiI ATGCAT 3 cut(s) 592, 1360, 1408
NspI RCATGY 4 cut(s) 1723, 1923, 2217, 2804
NspV TTCGAA 2 cut(s) 779, 1764
OliI CACNNNNGTG 1 cut(s) 992
PaeI GCATGC 1 cut(s) 1923
PaeR7I CTCGAG 1 cut(s) 2699
PagI TCATGA 2 cut(s) 1825, 2253
PceI AGGCCT 2 cut(s) 404, 976
PciI ACATGT 1 cut(s) 2800
PctI GAATGC 6 cut(s) 592, 895, 1804, 2098, 2140, 2320
PdmI GAANNNNTTC 1 cut(s) 641
PfeI GAWTC 6 cut(s) 771, 857, 1142, 1822, 2039, 2774
PflFI GACNNNGTC 1 cut(s) 1589
PflMI CCANNNNNTGG 2 cut(s) 284, 1491
PkrI GCNGC 5 cut(s) 412, 960, 2440, 2827, 2830
PleI GAGTC 3 cut(s) 171, 1051, 2710
PpsI GAGTC 3 cut(s) 171, 1051, 2710
Ppu21I YACGTR 1 cut(s) 1213
PpuMI RGGWCCY 1 cut(s) 216
PscI ACATGT 1 cut(s) 2800
PshBI ATTAAT 2 cut(s) 1502, 2406
Psp5II RGGWCCY 1 cut(s) 216
Psp6I CCWGG 4 cut(s) 1104, 1145, 1612, 2896
PspEI GGTNACC 1 cut(s) 1591
PspFI CCCAGC 5 cut(s) 818, 1748, 2710, 2759, 2831
PspGI CCWGG 4 cut(s) 1104, 1145, 1612, 2896
PspN4I GGNNCC 6 cut(s) 20, 579, 795, 2178, 2481, 2781
PspPI GGNCC 3 cut(s) 216, 2617, 2779
PspPPI RGGWCCY 1 cut(s) 216
PspXI VCTCGAGB 1 cut(s) 2699
PstNI CAGNNNCTG 3 cut(s) 219, 298, 2831
PsuI RGATCY 2 cut(s) 2287, 2446
PsyI GACNNNGTC 1 cut(s) 1589
PvuII CAGCTG 1 cut(s) 2831
RsaI GTAC 5 cut(s) 353, 815, 1211, 1553, 2895
RsaNI GTAC 5 cut(s) 352, 814, 1210, 1552, 2894
RseI CAYNNNNRTG 6 cut(s) 231, 992, 1056, 1662, 2012, 2733
SatI GCNGC 5 cut(s) 411, 959, 2439, 2826, 2829
Sau3AI GATC 4 cut(s) 303, 1876, 2287, 2446
Sau96I GGNCC 3 cut(s) 216, 2617, 2779
SchI GAGTC 3 cut(s) 171, 1052, 2711
ScrFI CCNGG 5 cut(s) 1106, 1147, 1614, 1930, 2898
SduI GDGCHC 3 cut(s) 686, 1218, 2221
SfaNI GCATC 7 cut(s) 412, 945, 1155, 1273, 1528, 1551, 2836
SfcI CTRYAG 1 cut(s) 861
Sfr274I CTCGAG 1 cut(s) 2699
SfuI TTCGAA 2 cut(s) 779, 1764
SinI GGWCC 3 cut(s) 216, 2617, 2779
SlaI CTCGAG 1 cut(s) 2699
SmiMI CAYNNNNRTG 6 cut(s) 231, 992, 1056, 1662, 2012, 2733
SmlI CTYRAG 4 cut(s) 152, 1325, 2699, 2884
SmoI CTYRAG 4 cut(s) 152, 1325, 2699, 2884
SpeI ACTAGT 1 cut(s) 494
SphI GCATGC 1 cut(s) 1923
SseBI AGGCCT 2 cut(s) 404, 976
SsiI CCGC 3 cut(s) 410, 1509, 1991
SspI AATATT 1 cut(s) 2818
SspMI CTAG 9 cut(s) 495, 689, 693, 843, 962, 2154, 2244, 2624, 2865
StuI AGGCCT 2 cut(s) 404, 976
StyD4I CCNGG 5 cut(s) 1104, 1145, 1612, 1928, 2896
StyI CCWWGG 1 cut(s) 581
TaaI ACNGT 4 cut(s) 207, 243, 1733, 2055
TaiI ACGT 1 cut(s) 1215
TaqI TCGA 4 cut(s) 779, 998, 1764, 2700
TaqII GACCGA 1 cut(s) 98
TatI WGTACW 2 cut(s) 351, 1551
TauI GCSGC 1 cut(s) 413
TfiI GAWTC 6 cut(s) 771, 857, 1142, 1822, 2039, 2774
TscAI CASTG 5 cut(s) 667, 1627, 2112, 2145, 2350
TseFI GTSAC 5 cut(s) 985, 1591, 1622, 2188, 2654
TseI GCWGC 4 cut(s) 958, 2438, 2825, 2828
Tsp45I GTSAC 5 cut(s) 985, 1591, 1622, 2188, 2654
TspGWI ACGGA 2 cut(s) 378, 1241
TspRI CASTG 5 cut(s) 667, 1627, 2112, 2145, 2350
Tth111I GACNNNGTC 1 cut(s) 1589
Van91I CCANNNNNTGG 2 cut(s) 284, 1491
VneI GTGCAC 1 cut(s) 1214
VpaK11BI GGWCC 3 cut(s) 216, 2617, 2779
VspI ATTAAT 2 cut(s) 1502, 2406
XapI RAATTY 5 cut(s) 676, 1192, 2200, 2724, 2788
XceI RCATGY 4 cut(s) 1723, 1923, 2217, 2804
XhoI CTCGAG 1 cut(s) 2699
XmnI GAANNNNTTC 1 cut(s) 641
XspI CTAG 9 cut(s) 495, 689, 693, 843, 962, 2154, 2244, 2624, 2865
Zsp2I ATGCAT 3 cut(s) 592, 1360, 1408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.