Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0004055

Physical Location & Seq

Genomic Coordinates Reverse (-)

23640510 .. 23649046

Gene Structure 8537 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g29910.t12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGACGCCGCTGCCGCCGCCTCTGTCACGTGGAGCGACGAGAAAAGCGAAGAAGAAACAAATCCAACACCAACACGCAGAGCTGGAGCGCTTGGATTCTCTGCCATGGAACCCCTCCTCTTCTGTTCCTCTCCCCAATGACAATGATGATGATGATGATGTCAATGGCCTCGAAGGAGGTTTTCTTATGCTTGAGGAGATTGATGAGGCTGATTATGGTTTAGACATTCCTGCATTAGAAGTAGAAACCAGTTCTAGGAACAAAAAGTGTAAGCCAACTAAAAGGTCCAAGAAGCGAAAGCATGACCAGGTTGACGCCTTGGGGGTTCAGGATGAGAAAGACATGACCAAGAAGCTGGAGGAACCTGATGGTAATGGCGGCAGTGAAGACAATGATGGAGATGCGGGTTCGAAGAAGAAAATGAACAAGAAGAAGAAGAAGAAGGGGACAGCCAAGGACACCCAGAAAATTGAGGAATCCACTGCTGATGGAAAGGATGAAGTAGAGGAGCAAGTTGATGAGTATGAATACCATGCATGGAATGAGTTGAGACTTCATCCCCTGATTATGAGATCGATATATAGGCTTGGCTTCAAAGAACCAACAGCCATCCAGAAAGCCTGCATTCCTGCTGCTGCTCATCAAGGGAAGGATGTTGTTGGTGCTGCGGAAACAGGATCTGGGAAAACGTTAGCTTTTGGTCTGCCAATTTTGCAACGCCTGTTGGATGAAAGAGAAAAGGCTGTGAAAGTGTTTGAAGAAAAAGGAGAGGAAGCAGAAAAAGTCACTGCAAAAGGCTTTTTACGGGCCCTTGTTATTACTCCTACAAGAGAGCTCTCACTTCAGGTCTCTGATCATCTTAAGGCAGTCGCCAAGGATACTGATATTAGAGTGGTGGCAATAGTTGGAGGTATGTCAACGGACAAGCAGGAGAGACTTCTTAGATCAAGACCTGAGATTGTTGTTGGAACTCCAGGGAGATTATGGGAACTTATGTCTGGAGGAGAAAAGCATCTAGTTGAGTTGCACTCGTTGTCTTTCTTTGTGCTGGATGAGGCTGATCGAATGATAGAAAGTGGCCATTTCCATGAATTGCAGTCGATTATCGACATGCTTCCTTTAAAGAATAGTTCTTCTGTACATTCCGGAAACACACAAGATTCTGTTACCATGCCCAACATCCAGAGGAAGAAGAGACAGACATTTGTTTTATCTGCAACAATAGCACTATCTGCTGATTTCCGGAAAAAGCTGAAGCGTAGTTCTCTAAAACCAAAGCAATCAACGTCTGATGGGGTGAATTCTATAGAAGCTCTCTCTGAGAGAGCAGGGATGAGAGACAATGTAGCCATCATTGATCTGACAAATACATCCATTTTGGCAAATAAGCTCGAAGAGTCATTTATTGAATGCAGGGAAGAAGACAAAGACGCCTATTTGTATTATATATTAAGTGTTCATGGGCAAGGTCGCACAATCATATTCTGTACATCCATTGCAGCTTTACGGCATATAACATCGCTCTTGCGAATCCTTGGCACAGATGTTTTGACACTTCACGCTCAGATGCATCAGCGAGCTCGTTTGAAGGTATTGGAATGGATGTGGGTCCCACTTGCTTACCAGGAATCGATTCCTAATGAAACCCCTTATTCGATACCTAAGGGGGAGATGGCTATCAAAATCAAGGCAATTGACCGATTTCGGGGGAGTGAACACGGTAAACTTGTGGCTACTGATGTTGCAGCCAGAGGCCTGGATATTCCTGGTGTTCGAACTGTTATTCACTACCAGCTTCCCCATTCAGCAGAAGTTTATGTTCATAGAAGTGGTAGAACTGCTAGAGCCACTGCCGATGGGTGTAGCATTGCACTAATCGCACCAAATGAGACATCCAAATTTGCTTCTCTGTGCAAATCATTTTCTAAGCTAAGTTTTCAACGATTTCCTTTGGAGAACTCATACTTCCCAGAGGTTATGAGACGATTATCTCTTGCACGCCAAATTGACAAGATTCTGCGGAAGGATTCCCAGGACAGAGCAAAGAAAAGCTGGTATGAAAGAAATGCAGAATTAGTTGAGTTGGTTGTCGACAGTGATGAGGATGAAGAGGATAGAGTTAAGAATTATAAGCAAAAGAAAGCCAGCTCTATGAATTTAAAAAACTTACAGCAGGAATTGAAAATGTTGCTTTCACGTCCATTACAACCGAAGTCATTTTCACATCGGTATTTGACTGGGTCTGGTATTACACCTCTGATGCAAGATCAATTTGAAGAATTGGCTAAGCAAAAACTAGGCGATAGCAGCAACTCAGGAAAACGAAGTAAAATGGTAGTTATTGGGCAGAATTGTGTGGAACCACTCCAAGCACTTCGGAGTTCTGGGCATGAGGTGCACATAGATGTGAAAGAGGCGGCACAAAAACGGAGGAATATGGAGAACCTAAGGAGGAAAAGAAAAGACGAGAAAAAGCGGTTGAGAGATGACCGCAGAAAGAGGAAGAAGCAGCTAAAAGGGGGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

843

Amino Acids

94.94

Weight (kDa)

9.14

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	13 - 220	6.3e-40	DEAD/DEAH box helicase
Helicase_C	PF00271	287 - 394	5.3e-27	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16840 AT3G16840
fragaria_vesca	FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910
malus_domestica	MD12G1094500.v1.1 MD14G1084300.v1.1
prunus_persica	Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1
pyrus_communis	pycom14g07400
rosa_chinensis	RchiOBHm_Chr3g0492441
rosa_laevigata	RLG00000022766
rosa_multiflora	Rmu_sc0003156.1_g000008 Rmu_sc0007709.1_g000003 Rmu_sc0017916.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392260
rosa_rugosa	Rorug03G0253900
rosa_samantha	Rh3AG304100 Rh3BG340000 Rh3CG337200 Rh3DG339200
rosa_wichuraiana	Rw3G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2130
AccI	GTMKAC	1 cut(s)	2091
AccIII	TCCGGA	2 cut(s)	1145, 1242
AclI	AACGTT	1 cut(s)	689
AclWI	GGATC	1 cut(s)	685
AcoI	YGGCCR	1 cut(s)	1078
AcsI	RAATTY	3 cut(s)	1300, 1898, 2155
AcuI	CTGAAG	2 cut(s)	827, 1274
AcvI	CACGTG	1 cut(s)	29
AcyI	GRCGYC	3 cut(s)	5, 315, 1431
AfaI	GTAC	2 cut(s)	1140, 1489
AfeI	AGCGCT	1 cut(s)	89
AfiI	CCNNNNNNNGG	2 cut(s)	255, 1705
AflII	CTTAAG	1 cut(s)	860
AgsI	TTSAA	7 cut(s)	595, 758, 1409, 1588, 1940, 2182, 2276
AjiI	CACGTC	1 cut(s)	2198
AjnI	CCWGG	6 cut(s)	306, 973, 1623, 1755, 1765, 2031
Alw21I	GWGCWC	3 cut(s)	837, 1582, 2400
Alw26I	GTCTC	7 cut(s)	544, 853, 928, 1189, 1332, 1883, 1975
Alw44I	GTGCAC	1 cut(s)	2396
AlwI	GGATC	1 cut(s)	685
AlwNI	CAGNNNCTG	1 cut(s)	680
Aor13HI	TCCGGA	2 cut(s)	1145, 1242
Aor51HI	AGCGCT	1 cut(s)	89
AoxI	GGCC	4 cut(s)	166, 807, 1078, 1753
ApaI	GGGCCC	1 cut(s)	811
ApaLI	GTGCAC	1 cut(s)	2396
ApeKI	GCWGC	8 cut(s)	10, 632, 635, 665, 1499, 1745, 2307, 2509
ApoI	RAATTY	3 cut(s)	1300, 1898, 2155
Asp700I	GAANNNNTTC	1 cut(s)	1632
AspLEI	GCGC	1 cut(s)	90
AspS9I	GGNCC	4 cut(s)	285, 807, 808, 1609
AsuHPI	GGTGA	1 cut(s)	1309
AsuII	TTCGAA	2 cut(s)	410, 1774
AvaII	GGWCC	2 cut(s)	285, 1609
AxyI	CCTNAGG	2 cut(s)	1662, 2447
BaeGI	GKGCMC	2 cut(s)	811, 2400
BalI	TGGCCA	1 cut(s)	1080
BanII	GRGCYC	3 cut(s)	811, 837, 1582
BbrPI	CACGTG	1 cut(s)	29
BbsI	GAAGAC	2 cut(s)	393, 1428
Bbv12I	GWGCWC	3 cut(s)	837, 1582, 2400
BbvI	GCAGC	7 cut(s)	619, 622, 652, 1511, 1757, 2319, 2521
BccI	CCATC	8 cut(s)	362, 389, 482, 617, 1286, 1358, 1666, 1850
BceAI	ACGGC	1 cut(s)	1523
BciT130I	CCWGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
BciVI	GTATCC	1 cut(s)	871
BclI	TGATCA	1 cut(s)	853
BcoDI	GTCTC	7 cut(s)	544, 853, 928, 1189, 1332, 1883, 1975
BfaI	CTAG	4 cut(s)	255, 1016, 1842, 2297
BfmI	CTRYAG	1 cut(s)	1305
BfoI	RGCGCY	1 cut(s)	91
BfrI	CTTAAG	1 cut(s)	860
BfuI	GTATCC	1 cut(s)	871
BlpI	GCTNAGC	1 cut(s)	2286
Bme1390I	CCNGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
Bme18I	GGWCC	2 cut(s)	285, 1609
BmgBI	CACGTC	1 cut(s)	2198
BmgT120I	GGNCC	4 cut(s)	285, 807, 808, 1609
BmiI	GGNNCC	6 cut(s)	110, 363, 809, 1610, 1611, 2361
BmrFI	CCNGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
BmrI	ACTGGG	1 cut(s)	2247
BmsI	GCATC	5 cut(s)	391, 1021, 1557, 1579, 2250
BmuI	ACTGGG	1 cut(s)	2247
BpiI	GAAGAC	2 cut(s)	393, 1428
BplI	GAGNNNNNCTC	2 cut(s)	1013, 1045
BpmI	CTGGAG	4 cut(s)	104, 377, 957, 1020
Bpu1102I	GCTNAGC	1 cut(s)	2286
Bpu14I	TTCGAA	2 cut(s)	410, 1774
BpuEI	CTTGAG	1 cut(s)	212
Bsa29I	ATCGAT	2 cut(s)	575, 1631
BsaAI	YACGTR	1 cut(s)	29
BsaBI	GATNNNNATC	1 cut(s)	1676
BsaHI	GRCGYC	3 cut(s)	5, 315, 1431
BsaI	GGTCTC	1 cut(s)	853
BsaJI	CCNNGG	7 cut(s)	104, 318, 453, 873, 974, 1534, 2031
BsaWI	WCCGGW	2 cut(s)	1145, 1242
Bsc4I	CCNNNNNNNGG	2 cut(s)	255, 1705
Bse1I	ACTGG	2 cut(s)	249, 2242
Bse21I	CCTNAGG	2 cut(s)	1662, 2447
Bse3DI	GCAATG	2 cut(s)	1494, 1866
Bse8I	GATNNNNATC	1 cut(s)	1676
BseAI	TCCGGA	2 cut(s)	1145, 1242
BseBI	CCWGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
BseCI	ATCGAT	2 cut(s)	575, 1631
BseDI	CCNNGG	7 cut(s)	104, 318, 453, 873, 974, 1534, 2031
BseJI	GATNNNNATC	1 cut(s)	1676
BseLI	CCNNNNNNNGG	2 cut(s)	255, 1705
BseMI	GCAATG	2 cut(s)	1494, 1866
BseMII	CTCAG	4 cut(s)	945, 1311, 1577, 2328
BseNI	ACTGG	2 cut(s)	249, 2242
BseRI	GAGGAG	4 cut(s)	106, 209, 521, 1017
BseSI	GKGCMC	2 cut(s)	811, 2400
BseXI	GCAGC	7 cut(s)	619, 622, 652, 1511, 1757, 2319, 2521
BshFI	GGCC	4 cut(s)	168, 809, 1080, 1755
BshVI	ATCGAT	2 cut(s)	575, 1631
BsiHKAI	GWGCWC	3 cut(s)	837, 1582, 2400
BsiSI	CCGG	2 cut(s)	1146, 1243
BslFI	GGGAC	2 cut(s)	460, 1595
BslI	CCNNNNNNNGG	2 cut(s)	255, 1705
BsmAI	GTCTC	7 cut(s)	544, 853, 928, 1189, 1332, 1883, 1975
BsmBI	CGTCTC	1 cut(s)	1975
BsmFI	GGGAC	2 cut(s)	460, 1595
BsmI	GAATGC	2 cut(s)	624, 1415
BsnI	GGCC	4 cut(s)	168, 809, 1080, 1755
Bso31I	GGTCTC	1 cut(s)	853
Bsp119I	TTCGAA	2 cut(s)	410, 1774
Bsp120I	GGGCCC	1 cut(s)	807
Bsp1286I	GDGCHC	4 cut(s)	811, 837, 1582, 2400
Bsp13I	TCCGGA	2 cut(s)	1145, 1242
Bsp1407I	TGTACA	2 cut(s)	1138, 1487
Bsp143I	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
Bsp1720I	GCTNAGC	1 cut(s)	2286
Bsp19I	CCATGG	1 cut(s)	104
BspANI	GGCC	4 cut(s)	168, 809, 1080, 1755
BspCNI	CTCAG	4 cut(s)	946, 1312, 1576, 2327
BspDI	ATCGAT	2 cut(s)	575, 1631
BspEI	TCCGGA	2 cut(s)	1145, 1242
BspLI	GGNNCC	6 cut(s)	110, 363, 809, 1610, 1611, 2361
BspPI	GGATC	1 cut(s)	685
BspT104I	TTCGAA	2 cut(s)	410, 1774
BspTI	CTTAAG	1 cut(s)	860
BspTNI	GGTCTC	1 cut(s)	853
BsrDI	GCAATG	2 cut(s)	1494, 1866
BsrGI	TGTACA	2 cut(s)	1138, 1487
BsrI	ACTGG	2 cut(s)	249, 2242
BssECI	CCNNGG	7 cut(s)	104, 318, 453, 873, 974, 1534, 2031
BssMI	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
BssNI	GRCGYC	3 cut(s)	5, 315, 1431
BssT1I	CCWWGG	5 cut(s)	104, 318, 453, 873, 1534
Bst2UI	CCWGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
Bst4CI	ACNGT	3 cut(s)	1721, 1780, 2096
Bst6I	CTCTTC	4 cut(s)	124, 1187, 1389, 2103
BstACI	GRCGYC	3 cut(s)	5, 315, 1431
BstAFI	CTTAAG	1 cut(s)	860
BstAPI	GCANNNNNTGC	2 cut(s)	1232, 2395
BstAUI	TGTACA	2 cut(s)	1138, 1487
BstBAI	YACGTR	1 cut(s)	29
BstBI	TTCGAA	2 cut(s)	410, 1774
BstC8I	GCNNGC	4 cut(s)	622, 1578, 1999, 2146
BstDSI	CCRYGG	1 cut(s)	104
BstH2I	RGCGCY	1 cut(s)	91
BstHHI	GCGC	1 cut(s)	90
BstKTI	GATC	7 cut(s)	575, 680, 856, 947, 1063, 1360, 2269
BstMAI	GTCTC	7 cut(s)	544, 853, 928, 1189, 1332, 1883, 1975
BstMBI	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
BstMWI	GCNNNNNNNGC	8 cut(s)	13, 16, 712, 1223, 1232, 1877, 2307, 2395
BstNI	CCWGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
BstNSI	RCATGY	1 cut(s)	1114
BstSCI	CCNGG	6 cut(s)	306, 973, 1623, 1755, 1765, 2031
BstSFI	CTRYAG	1 cut(s)	1305
BstSLI	GKGCMC	2 cut(s)	811, 2400
BstV1I	GCAGC	7 cut(s)	619, 622, 652, 1511, 1757, 2319, 2521
BstV2I	GAAGAC	2 cut(s)	393, 1428
BstX2I	RGATCY	1 cut(s)	677
BstXI	CCANNNNNNTGG	2 cut(s)	355, 1756
BstYI	RGATCY	1 cut(s)	677
Bsu15I	ATCGAT	2 cut(s)	575, 1631
Bsu36I	CCTNAGG	2 cut(s)	1662, 2447
BsuI	GTATCC	1 cut(s)	871
BsuRI	GGCC	4 cut(s)	168, 809, 1080, 1755
BsuTUI	ATCGAT	2 cut(s)	575, 1631
BtgI	CCRYGG	1 cut(s)	104
BtgZI	GCGATG	1 cut(s)	1503
BtrI	CACGTC	1 cut(s)	2198
BtsI	GCAGTG	4 cut(s)	388, 480, 786, 1848
BtsIMutI	CAGTG	5 cut(s)	388, 480, 786, 1848, 2101
Cac8I	GCNNGC	4 cut(s)	622, 1578, 1999, 2146
CaiI	CAGNNNCTG	1 cut(s)	680
CfoI	GCGC	1 cut(s)	90
Cfr13I	GGNCC	4 cut(s)	285, 807, 808, 1609
ClaI	ATCGAT	2 cut(s)	575, 1631
CseI	GACGC	3 cut(s)	13, 323, 1439
CsiI	ACCWGGT	1 cut(s)	306
Csp6I	GTAC	2 cut(s)	1139, 1488
CviQI	GTAC	2 cut(s)	1139, 1488
DpnI	GATC	7 cut(s)	574, 679, 855, 946, 1062, 1359, 2268
DpnII	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
DraI	TTTAAA	2 cut(s)	1122, 2160
EaeI	YGGCCR	1 cut(s)	1078
Eam1104I	CTCTTC	4 cut(s)	124, 1187, 1389, 2103
EarI	CTCTTC	4 cut(s)	124, 1187, 1389, 2103
Ecl136II	GAGCTC	2 cut(s)	835, 1580
Eco130I	CCWWGG	5 cut(s)	104, 318, 453, 873, 1534
Eco147I	AGGCCT	1 cut(s)	1755
Eco24I	GRGCYC	3 cut(s)	811, 837, 1582
Eco31I	GGTCTC	1 cut(s)	853
Eco47I	GGWCC	2 cut(s)	285, 1609
Eco47III	AGCGCT	1 cut(s)	89
Eco53kI	GAGCTC	2 cut(s)	835, 1580
Eco57I	CTGAAG	2 cut(s)	827, 1274
Eco72I	CACGTG	1 cut(s)	29
Eco81I	CCTNAGG	2 cut(s)	1662, 2447
EcoICRI	GAGCTC	2 cut(s)	835, 1580
EcoO109I	RGGNCCY	2 cut(s)	808, 1609
EcoRI	GAATTC	1 cut(s)	1300
EcoRII	CCWGG	6 cut(s)	306, 973, 1623, 1755, 1765, 2031
EcoT14I	CCWWGG	5 cut(s)	104, 318, 453, 873, 1534
EcoT22I	ATGCAT	2 cut(s)	538, 1572
EcoT38I	GRGCYC	3 cut(s)	811, 837, 1582
ErhI	CCWWGG	5 cut(s)	104, 318, 453, 873, 1534
Esp3I	CGTCTC	1 cut(s)	1975
FaqI	GGGAC	2 cut(s)	460, 1595
FauI	CCCGC	1 cut(s)	397
FbaI	TGATCA	1 cut(s)	853
FblI	GTMKAC	1 cut(s)	2091
FriOI	GRGCYC	3 cut(s)	811, 837, 1582
FspBI	CTAG	4 cut(s)	255, 1016, 1842, 2297
GlaI	GCGC	1 cut(s)	89
GsuI	CTGGAG	4 cut(s)	104, 377, 957, 1020
HaeII	RGCGCY	1 cut(s)	91
HaeIII	GGCC	4 cut(s)	168, 809, 1080, 1755
HapII	CCGG	2 cut(s)	1146, 1243
HgaI	GACGC	3 cut(s)	13, 323, 1439
HhaI	GCGC	1 cut(s)	90
Hin1I	GRCGYC	3 cut(s)	5, 315, 1431
Hin6I	GCGC	1 cut(s)	88
HinP1I	GCGC	1 cut(s)	88
HincII	GTYRAC	3 cut(s)	313, 918, 2092
HindII	GTYRAC	3 cut(s)	313, 918, 2092
HinfI	GANTC	9 cut(s)	95, 476, 1160, 1397, 1530, 1628, 1633, 2014, 2027
HpaII	CCGG	2 cut(s)	1146, 1243
HphI	GGTGA	1 cut(s)	1309
Hpy166II	GTNNAC	6 cut(s)	313, 918, 1715, 1724, 2092, 2398
Hpy188I	TCNGA	7 cut(s)	853, 1291, 1321, 1362, 1566, 2259, 2379
Hpy188III	TCNNGA	8 cut(s)	329, 613, 948, 999, 1146, 1183, 1243, 2316
Hpy8I	GTNNAC	6 cut(s)	313, 918, 1715, 1724, 2092, 2398
Hpy99I	CGWCG	1 cut(s)	40
HpyAV	CCTTC	5 cut(s)	167, 436, 643, 1582, 2017
HpyCH4III	ACNGT	3 cut(s)	1721, 1780, 2096
HpyCH4IV	ACGT	4 cut(s)	28, 689, 1286, 2197
HpyF10VI	GCNNNNNNNGC	8 cut(s)	13, 16, 712, 1223, 1232, 1877, 2307, 2395
HpySE526I	ACGT	4 cut(s)	28, 689, 1286, 2197
Hsp92I	GRCGYC	3 cut(s)	5, 315, 1431
HspAI	GCGC	1 cut(s)	88
KflI	GGGWCCC	1 cut(s)	1609
Kpn2I	TCCGGA	2 cut(s)	1145, 1242
Ksp22I	TGATCA	1 cut(s)	853
Kzo9I	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
LmnI	GCTCC	3 cut(s)	32, 85, 508
Lsp1109I	GCAGC	7 cut(s)	619, 622, 652, 1511, 1757, 2319, 2521
LweI	GCATC	5 cut(s)	391, 1021, 1557, 1579, 2250
MabI	ACCWGGT	1 cut(s)	306
MaeI	CTAG	4 cut(s)	255, 1016, 1842, 2297
MaeII	ACGT	4 cut(s)	28, 689, 1286, 2197
MaeIII	GTNAC	3 cut(s)	24, 784, 1165
MalI	GATC	7 cut(s)	574, 679, 855, 946, 1062, 1359, 2268
MboI	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
MfeI	CAATTG	1 cut(s)	1692
MflI	RGATCY	1 cut(s)	677
MhlI	GDGCHC	4 cut(s)	811, 837, 1582, 2400
MlsI	TGGCCA	1 cut(s)	1080
MluNI	TGGCCA	1 cut(s)	1080
MlyI	GAGTC	1 cut(s)	1406
MmeI	TCCRAC	4 cut(s)	88, 705, 886, 946
Mox20I	TGGCCA	1 cut(s)	1080
Mph1103I	ATGCAT	2 cut(s)	538, 1572
MroI	TCCGGA	2 cut(s)	1145, 1242
MroXI	GAANNNNTTC	1 cut(s)	1632
MscI	TGGCCA	1 cut(s)	1080
MseI	TTAA	5 cut(s)	861, 1121, 1451, 2121, 2159
MslI	CAYNNNNRTG	4 cut(s)	1086, 1827, 2403, 2405
Msp20I	TGGCCA	1 cut(s)	1080
MspA1I	CMGCKG	1 cut(s)	10
MspCI	CTTAAG	1 cut(s)	860
MspI	CCGG	2 cut(s)	1146, 1243
MspR9I	CCNGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
MunI	CAATTG	1 cut(s)	1692
Mva1269I	GAATGC	2 cut(s)	624, 1415
MvaI	CCWGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
MwoI	GCNNNNNNNGC	8 cut(s)	13, 16, 712, 1223, 1232, 1877, 2307, 2395
NcoI	CCATGG	1 cut(s)	104
NdeII	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
NlaIV	GGNNCC	6 cut(s)	110, 363, 809, 1610, 1611, 2361
NmuCI	GTSAC	2 cut(s)	24, 784
NsiI	ATGCAT	2 cut(s)	538, 1572
NspI	RCATGY	1 cut(s)	1114
NspV	TTCGAA	2 cut(s)	410, 1774
PceI	AGGCCT	1 cut(s)	1755
PcsI	WCGNNNNNNNCGW	1 cut(s)	44
PctI	GAATGC	2 cut(s)	624, 1415
PdmI	GAANNNNTTC	1 cut(s)	1632
PfeI	GAWTC	8 cut(s)	95, 476, 1160, 1530, 1628, 1633, 2014, 2027
PflFI	GACNNNGTC	1 cut(s)	2239
PleI	GAGTC	1 cut(s)	1405
PmaCI	CACGTG	1 cut(s)	29
PmlI	CACGTG	1 cut(s)	29
PpsI	GAGTC	1 cut(s)	1405
Ppu21I	YACGTR	1 cut(s)	29
PpuMI	RGGWCCY	1 cut(s)	1609
PsiI	TTATAA	1 cut(s)	2130
Psp124BI	GAGCTC	2 cut(s)	837, 1582
Psp1406I	AACGTT	1 cut(s)	689
Psp5II	RGGWCCY	1 cut(s)	1609
Psp6I	CCWGG	6 cut(s)	306, 973, 1623, 1755, 1765, 2031
PspCI	CACGTG	1 cut(s)	29
PspGI	CCWGG	6 cut(s)	306, 973, 1623, 1755, 1765, 2031
PspN4I	GGNNCC	6 cut(s)	110, 363, 809, 1610, 1611, 2361
PspOMI	GGGCCC	1 cut(s)	807
PspPI	GGNCC	4 cut(s)	285, 807, 808, 1609
PspPPI	RGGWCCY	1 cut(s)	1609
PstNI	CAGNNNCTG	1 cut(s)	680
PsuI	RGATCY	1 cut(s)	677
PsyI	GACNNNGTC	1 cut(s)	2239
RsaI	GTAC	2 cut(s)	1140, 1489
RsaNI	GTAC	2 cut(s)	1139, 1488
RseI	CAYNNNNRTG	4 cut(s)	1086, 1827, 2403, 2405
SacI	GAGCTC	2 cut(s)	837, 1582
SalI	GTCGAC	1 cut(s)	2090
SaqAI	TTAA	5 cut(s)	861, 1121, 1451, 2121, 2159
Sau3AI	GATC	7 cut(s)	572, 677, 853, 944, 1060, 1357, 2266
Sau96I	GGNCC	4 cut(s)	285, 807, 808, 1609
SchI	GAGTC	1 cut(s)	1406
ScrFI	CCNGG	6 cut(s)	308, 975, 1625, 1757, 1767, 2033
SduI	GDGCHC	4 cut(s)	811, 837, 1582, 2400
SexAI	ACCWGGT	1 cut(s)	306
SfaNI	GCATC	5 cut(s)	391, 1021, 1557, 1579, 2250
SfcI	CTRYAG	1 cut(s)	1305
SfuI	TTCGAA	2 cut(s)	410, 1774
SinI	GGWCC	2 cut(s)	285, 1609
SmiMI	CAYNNNNRTG	4 cut(s)	1086, 1827, 2403, 2405
SmlI	CTYRAG	2 cut(s)	191, 860
SmoI	CTYRAG	2 cut(s)	191, 860
SseBI	AGGCCT	1 cut(s)	1755
SspMI	CTAG	4 cut(s)	255, 1016, 1842, 2297
SstI	GAGCTC	2 cut(s)	837, 1582
StuI	AGGCCT	1 cut(s)	1755
StyD4I	CCNGG	6 cut(s)	306, 973, 1623, 1755, 1765, 2031
StyI	CCWWGG	5 cut(s)	104, 318, 453, 873, 1534
TaaI	ACNGT	3 cut(s)	1721, 1780, 2096
TaiI	ACGT	4 cut(s)	31, 692, 1289, 2200
TaqII	GACCGA	1 cut(s)	1713
TatI	WGTACW	2 cut(s)	1138, 1487
TauI	GCSGC	5 cut(s)	10, 16, 19, 381, 2420
TfiI	GAWTC	8 cut(s)	95, 476, 1160, 1530, 1628, 1633, 2014, 2027
Tru1I	TTAA	5 cut(s)	861, 1121, 1451, 2121, 2159
Tru9I	TTAA	5 cut(s)	861, 1121, 1451, 2121, 2159
TscAI	CASTG	5 cut(s)	388, 487, 793, 1855, 2101
TseFI	GTSAC	2 cut(s)	24, 784
TseI	GCWGC	8 cut(s)	10, 632, 635, 665, 1499, 1745, 2307, 2509
Tsp45I	GTSAC	2 cut(s)	24, 784
TspGWI	ACGGA	2 cut(s)	935, 2443
TspRI	CASTG	5 cut(s)	388, 487, 793, 1855, 2101
Tth111I	GACNNNGTC	1 cut(s)	2239
Vha464I	CTTAAG	1 cut(s)	860
VneI	GTGCAC	1 cut(s)	2396
VpaK11BI	GGWCC	2 cut(s)	285, 1609
XapI	RAATTY	3 cut(s)	1300, 1898, 2155
XceI	RCATGY	1 cut(s)	1114
XcmI	CCANNNNNNNNNTGG	1 cut(s)	981
XmiI	GTMKAC	1 cut(s)	2091
XmnI	GAANNNNTTC	1 cut(s)	1632
XspI	CTAG	4 cut(s)	255, 1016, 1842, 2297
Zsp2I	ATGCAT	2 cut(s)	538, 1572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.