Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007709.1

Orthogroup ID

OG0004055

Physical Location & Seq

Genomic Coordinates Forward (+)

12749 .. 20446

Gene Structure 7698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007709.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ctgtcacgtggagcgacgaggaaagcgaagaagaaacaaattcaacagcaacacgcagagctggagcgtttggattctctcccatggaacccctcctctgtccctctccctaatgacaatgacgatgctgaccctttctcccatgtcaatggcctcgaaggaggttttcttatgcttgaagagattgatgaggctgattatggcttagaaattcctgcactagaagtagaaaatagaaatcgaaacgataagtctaagccaactaaaaagtccaagaaacgaaagcatgaccaacttgatgcgagtgataccttggttgaggaggttattgctgaagagagattggacaaggatgagaaacacatgactaagaaggagaaaacgaagaagaagaagaagaagctggaggaacctcagaaaattgaggacagtgatgataatggtggcagtgaagttgaagagaaagacaatgatggggatgtcggttcaaagaagaaaacgaagaagaagaagaaggctgaggaaagccggaaaagtgaagaatccacagttgatgagaaggatgaagtagaagagcaagttgatgaggatgaatactatgcatggaatgagttgagacttcatcccctgattatgagatcgatatacaggcttgggttcaaagaaccaacggccatccagaaagcttgtattcctgctgctgctcatcaagggaaggatgttgttggtgctgcggaaacaggatctggcaaaacgttagcttttggtctgccgattttgcaacgcctgttggacgaaagagaaaaggctgtgaagatgtttgaagaaaagggagaggaagcagaaaaagtcacttcaaaaggctttttacgggcccttgttattactcctacgagagaactttcacttcaggtctctgatcatcttaaggcagttgctaaagatactgatattagagtggttcctatagttggaggcatgtcaacggacaagcaggagagacttcttagatcaagacctgagattgttgttggaaccccagggagattatgggaacttatgtctggaggagaaaagcatctagttgagttgcattcattgtctttctttgtgctggatgaggctgatcgaatgatagaaaacggccatttccatgaattgcagtctattattgacatgcttccttcaaggaatagttctgccgtacattccggaaatgcacaagattctgttaccacgaccaacttccagaggaagaagagacaaacatttgttttatctgcaacaatagcactttctgctgatttccggaaaaagctgaagcgtagttccctaaaaccaaagcaatcaacgtctgatggggtgaattctatagaagctctctctgagcgagcagggatgagagacaatgttgccatcattgatctgacaaatacatccattttggcgaataagctcgaagagtcatttattgaatgcagggaagaagacaaagatgcctatttgtattatatattaagtgttcatgggcaaggtcgcacaatcatattctgtacatccattgcagctttgcgacatataacatcgctcttgcgcatccttggcacagatgttttgacacttcatgctcagatgcatcagcgagctcgtttgaaggcaattgaccgttttagggggagtgaacatggtaaacttgtggctactgatgttgcagcaagaggcctggatattcctggtgttcgaacagttattcactaccagcttccccattcagcagaagtttacgttcacagaagtggtagaactgctagagccactgctgatgggtgtagcattgcactaattgcaccaaatgagacatccaaatttgcttctttgtgcaaatcattttctaaggtaagttttcaacgatttcctttggagaactcatacttcccagaggttatgagacgattatctcttgcgcgccaaatagacaagattctgcggaaggattcccaggacaaagcaaagaaaagctggtatgaaagaaatgcagaattggttgaattggttgtggacagtgatgaggatgaagaggatagagttaaaaattataagcaaaagaaagccagctccatgaatttaaaaagtttgcagcaggaactgaagatgttgctttcacgtccattacaaccgaagtcattttcacatcgttacttgactgggtctggtatcacacctctggtgcaacatcaatttgaagaattggctaagcaaaaactaggcgatagcagcaactcaggaaaaagaagtaaattgttagttattggtcagaattgtgtggaaccactccaagcacttaggagttctgggcatgaggtgcacatagatgtgaaagaggcggcacaaaaacgaaggaatatggagaacctaaggaggaaaagaaaagaggagaaaaaacggttgagagatgaccgcagaaagaggaagaaacagctaaaagggggagaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

831

Amino Acids

94.15

Weight (kDa)

9.12

Isoelectric Point (pI)

49.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16840 AT3G16840
fragaria_vesca	FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910
malus_domestica	MD12G1094500.v1.1 MD14G1084300.v1.1
prunus_persica	Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1
pyrus_communis	pycom14g07400
rosa_chinensis	RchiOBHm_Chr3g0492441
rosa_laevigata	RLG00000022766
rosa_multiflora	Rmu_sc0003156.1_g000008 Rmu_sc0007709.1_g000003 Rmu_sc0017916.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392260
rosa_rugosa	Rorug03G0253900
rosa_samantha	Rh3AG304100 Rh3BG340000 Rh3CG337200 Rh3DG339200
rosa_wichuraiana	Rw3G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2097
Acc16I	TGCGCA	1 cut(s)	1595
AccII	CGCG	1 cut(s)	1966
AccIII	TCCGGA	2 cut(s)	1211, 1308
AciI	CCGC	4 cut(s)	734, 1987, 2384, 2458
AclI	AACGTT	1 cut(s)	755
AclWI	GGATC	1 cut(s)	751
AcoI	YGGCCR	2 cut(s)	672, 1144
AcsI	RAATTY	5 cut(s)	39, 210, 1366, 1865, 2122
AcuI	CTGAAG	4 cut(s)	354, 893, 1340, 2168
AcvI	CACGTG	1 cut(s)	8
AfaI	GTAC	2 cut(s)	1206, 1555
AfiI	CCNNNNNNNGG	2 cut(s)	971, 1672
AflII	CTTAAG	1 cut(s)	926
AjiI	CACGTC	1 cut(s)	2165
AjnI	CCWGG	4 cut(s)	1039, 1722, 1732, 1998
AleI	CACNNNNGTG	1 cut(s)	1794
Alw21I	GWGCWC	2 cut(s)	1648, 2367
Alw26I	GTCTC	7 cut(s)	610, 919, 994, 1255, 1398, 1850, 1942
Alw44I	GTGCAC	1 cut(s)	2363
AlwI	GGATC	1 cut(s)	751
AlwNI	CAGNNNCTG	2 cut(s)	746, 2146
Aor13HI	TCCGGA	2 cut(s)	1211, 1308
AoxI	GGCC	5 cut(s)	151, 672, 873, 1144, 1720
ApaI	GGGCCC	1 cut(s)	877
ApaLI	GTGCAC	1 cut(s)	2363
ApeKI	GCWGC	7 cut(s)	698, 701, 731, 1565, 1712, 2137, 2274
ApoI	RAATTY	5 cut(s)	39, 210, 1366, 1865, 2122
AspLEI	GCGC	3 cut(s)	1596, 1966, 1968
AspS9I	GGNCC	2 cut(s)	873, 874
AsuHPI	GGTGA	1 cut(s)	1375
AsuII	TTCGAA	1 cut(s)	1741
AxyI	CCTNAGG	1 cut(s)	2414
BaeGI	GKGCMC	2 cut(s)	877, 2367
BaeI	ACNNNNGTAYC	2 cut(s)	300, 333
BanII	GRGCYC	2 cut(s)	877, 1648
BbrPI	CACGTG	1 cut(s)	8
BbsI	GAAGAC	1 cut(s)	1494
Bbv12I	GWGCWC	2 cut(s)	1648, 2367
BbvCI	CCTCAGC	1 cut(s)	519
BbvI	GCAGC	7 cut(s)	685, 688, 718, 1577, 1724, 2149, 2286
BccI	CCATC	5 cut(s)	467, 683, 1352, 1424, 1817
BceAI	ACGGC	3 cut(s)	687, 1159, 1187
BciT130I	CCWGG	4 cut(s)	1041, 1724, 1734, 2000
BclI	TGATCA	1 cut(s)	919
BcoDI	GTCTC	7 cut(s)	610, 919, 994, 1255, 1398, 1850, 1942
BfaI	CTAG	4 cut(s)	221, 1082, 1809, 2264
BfmI	CTRYAG	2 cut(s)	966, 1371
BfrI	CTTAAG	1 cut(s)	926
BisI	GCNGC	8 cut(s)	699, 702, 732, 1566, 1713, 2138, 2275, 2385
BlpI	GCTNAGC	1 cut(s)	2253
BlsI	GCNGC	8 cut(s)	700, 703, 733, 1567, 1714, 2139, 2276, 2386
Bme1390I	CCNGG	4 cut(s)	1041, 1724, 1734, 2000
BmgBI	CACGTC	1 cut(s)	2165
BmgT120I	GGNCC	2 cut(s)	873, 874
BmiI	GGNNCC	6 cut(s)	89, 411, 875, 963, 1036, 2328
BmrFI	CCNGG	4 cut(s)	1041, 1724, 1734, 2000
BmrI	ACTGGG	1 cut(s)	2214
BmsI	GCATC	7 cut(s)	115, 289, 1087, 1486, 1605, 1623, 1645
BmuI	ACTGGG	1 cut(s)	2214
BpiI	GAAGAC	1 cut(s)	1494
BpmI	CTGGAG	3 cut(s)	83, 425, 1086
Bpu10I	CCTNAGC	1 cut(s)	519
Bpu1102I	GCTNAGC	1 cut(s)	2253
Bpu14I	TTCGAA	1 cut(s)	1741
Bsa29I	ATCGAT	1 cut(s)	641
BsaAI	YACGTR	1 cut(s)	8
BsaI	GGTCTC	1 cut(s)	919
BsaJI	CCNNGG	6 cut(s)	83, 312, 1039, 1040, 1600, 1998
BsaWI	WCCGGW	2 cut(s)	1211, 1308
BsaXI	ACNNNNNCTCC	2 cut(s)	122, 152
Bsc4I	CCNNNNNNNGG	2 cut(s)	971, 1672
Bse1I	ACTGG	1 cut(s)	2209
Bse21I	CCTNAGG	1 cut(s)	2414
Bse3DI	GCAATG	2 cut(s)	1560, 1833
BseAI	TCCGGA	2 cut(s)	1211, 1308
BseBI	CCWGG	4 cut(s)	1041, 1724, 1734, 2000
BseCI	ATCGAT	1 cut(s)	641
BseDI	CCNNGG	6 cut(s)	83, 312, 1039, 1040, 1600, 1998
BseLI	CCNNNNNNNGG	2 cut(s)	971, 1672
BseMI	GCAATG	2 cut(s)	1560, 1833
BseMII	CTCAG	6 cut(s)	428, 510, 1011, 1377, 1643, 2295
BseNI	ACTGG	1 cut(s)	2209
BsePI	GCGCGC	1 cut(s)	1964
BseRI	GAGGAG	4 cut(s)	85, 335, 1083, 2447
BseSI	GKGCMC	2 cut(s)	877, 2367
BseXI	GCAGC	7 cut(s)	685, 688, 718, 1577, 1724, 2149, 2286
BsgI	GTGCAG	1 cut(s)	201
Bsh1236I	CGCG	1 cut(s)	1966
BshFI	GGCC	5 cut(s)	153, 674, 875, 1146, 1722
BshVI	ATCGAT	1 cut(s)	641
BsiHKAI	GWGCWC	2 cut(s)	1648, 2367
BsiSI	CCGG	3 cut(s)	529, 1212, 1309
BslFI	GGGAC	1 cut(s)	86
BslI	CCNNNNNNNGG	2 cut(s)	971, 1672
BsmAI	GTCTC	7 cut(s)	610, 919, 994, 1255, 1398, 1850, 1942
BsmBI	CGTCTC	1 cut(s)	1942
BsmFI	GGGAC	1 cut(s)	86
BsmI	GAATGC	2 cut(s)	1093, 1481
BsnI	GGCC	5 cut(s)	153, 674, 875, 1146, 1722
Bso31I	GGTCTC	1 cut(s)	919
Bsp119I	TTCGAA	1 cut(s)	1741
Bsp120I	GGGCCC	1 cut(s)	873
Bsp1286I	GDGCHC	3 cut(s)	877, 1648, 2367
Bsp13I	TCCGGA	2 cut(s)	1211, 1308
Bsp1407I	TGTACA	1 cut(s)	1553
Bsp143I	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
Bsp1720I	GCTNAGC	1 cut(s)	2253
Bsp19I	CCATGG	1 cut(s)	83
BspACI	CCGC	4 cut(s)	734, 1987, 2384, 2458
BspANI	GGCC	5 cut(s)	153, 674, 875, 1146, 1722
BspCNI	CTCAG	6 cut(s)	427, 511, 1012, 1378, 1642, 2294
BspDI	ATCGAT	1 cut(s)	641
BspEI	TCCGGA	2 cut(s)	1211, 1308
BspFNI	CGCG	1 cut(s)	1966
BspLI	GGNNCC	6 cut(s)	89, 411, 875, 963, 1036, 2328
BspPI	GGATC	1 cut(s)	751
BspQI	GCTCTTC	1 cut(s)	567
BspT104I	TTCGAA	1 cut(s)	1741
BspTI	CTTAAG	1 cut(s)	926
BspTNI	GGTCTC	1 cut(s)	919
BsrDI	GCAATG	2 cut(s)	1560, 1833
BsrGI	TGTACA	1 cut(s)	1553
BsrI	ACTGG	1 cut(s)	2209
BssECI	CCNNGG	6 cut(s)	83, 312, 1039, 1040, 1600, 1998
BssHII	GCGCGC	1 cut(s)	1964
BssMI	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
BssT1I	CCWWGG	3 cut(s)	83, 312, 1600
Bst2UI	CCWGG	4 cut(s)	1041, 1724, 1734, 2000
Bst4CI	ACNGT	6 cut(s)	431, 550, 1667, 1747, 2063, 2445
Bst6I	CTCTTC	7 cut(s)	174, 330, 453, 567, 1253, 1455, 2070
BstAFI	CTTAAG	1 cut(s)	926
BstAPI	GCANNNNNTGC	3 cut(s)	1298, 1844, 2362
BstAUI	TGTACA	1 cut(s)	1553
BstBAI	YACGTR	1 cut(s)	8
BstBI	TTCGAA	1 cut(s)	1741
BstC8I	GCNNGC	4 cut(s)	1392, 1644, 1966, 2113
BstDSI	CCRYGG	1 cut(s)	83
BstFNI	CGCG	1 cut(s)	1966
BstHHI	GCGC	3 cut(s)	1596, 1966, 1968
BstKTI	GATC	6 cut(s)	641, 746, 922, 1013, 1129, 1426
BstMAI	GTCTC	7 cut(s)	610, 919, 994, 1255, 1398, 1850, 1942
BstMBI	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
BstMWI	GCNNNNNNNGC	7 cut(s)	778, 1289, 1298, 1602, 1844, 2274, 2362
BstNI	CCWGG	4 cut(s)	1041, 1724, 1734, 2000
BstNSI	RCATGY	2 cut(s)	982, 1180
BstSCI	CCNGG	4 cut(s)	1039, 1722, 1732, 1998
BstSFI	CTRYAG	2 cut(s)	966, 1371
BstSLI	GKGCMC	2 cut(s)	877, 2367
BstUI	CGCG	1 cut(s)	1966
BstV1I	GCAGC	7 cut(s)	685, 688, 718, 1577, 1724, 2149, 2286
BstV2I	GAAGAC	1 cut(s)	1494
BstX2I	RGATCY	1 cut(s)	743
BstXI	CCANNNNNNTGG	1 cut(s)	149
BstYI	RGATCY	1 cut(s)	743
Bsu15I	ATCGAT	1 cut(s)	641
Bsu36I	CCTNAGG	1 cut(s)	2414
BsuRI	GGCC	5 cut(s)	153, 674, 875, 1146, 1722
BsuTUI	ATCGAT	1 cut(s)	641
BtgI	CCRYGG	1 cut(s)	83
BtgZI	GCGATG	1 cut(s)	1569
BtrI	CACGTC	1 cut(s)	2165
BtsI	GCAGTG	2 cut(s)	454, 1815
BtsIMutI	CAGTG	4 cut(s)	436, 454, 1815, 2068
Cac8I	GCNNGC	4 cut(s)	1392, 1644, 1966, 2113
CaiI	CAGNNNCTG	2 cut(s)	746, 2146
CfoI	GCGC	3 cut(s)	1596, 1966, 1968
Cfr13I	GGNCC	2 cut(s)	873, 874
ClaI	ATCGAT	1 cut(s)	641
Csp6I	GTAC	2 cut(s)	1205, 1554
CviQI	GTAC	2 cut(s)	1205, 1554
DpnI	GATC	6 cut(s)	640, 745, 921, 1012, 1128, 1425
DpnII	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
DraI	TTTAAA	1 cut(s)	2127
EaeI	YGGCCR	2 cut(s)	672, 1144
Eam1104I	CTCTTC	7 cut(s)	174, 330, 453, 567, 1253, 1455, 2070
EarI	CTCTTC	7 cut(s)	174, 330, 453, 567, 1253, 1455, 2070
Ecl136II	GAGCTC	1 cut(s)	1646
Eco130I	CCWWGG	3 cut(s)	83, 312, 1600
Eco147I	AGGCCT	1 cut(s)	1722
Eco24I	GRGCYC	2 cut(s)	877, 1648
Eco31I	GGTCTC	1 cut(s)	919
Eco53kI	GAGCTC	1 cut(s)	1646
Eco57I	CTGAAG	4 cut(s)	354, 893, 1340, 2168
Eco72I	CACGTG	1 cut(s)	8
Eco81I	CCTNAGG	1 cut(s)	2414
EcoICRI	GAGCTC	1 cut(s)	1646
EcoO109I	RGGNCCY	1 cut(s)	874
EcoRI	GAATTC	1 cut(s)	1366
EcoRII	CCWGG	4 cut(s)	1039, 1722, 1732, 1998
EcoT14I	CCWWGG	3 cut(s)	83, 312, 1600
EcoT22I	ATGCAT	2 cut(s)	604, 1638
EcoT38I	GRGCYC	2 cut(s)	877, 1648
ErhI	CCWWGG	3 cut(s)	83, 312, 1600
Esp3I	CGTCTC	1 cut(s)	1942
FaqI	GGGAC	1 cut(s)	86
FbaI	TGATCA	1 cut(s)	919
Fnu4HI	GCNGC	8 cut(s)	699, 702, 732, 1566, 1713, 2138, 2275, 2385
FriOI	GRGCYC	2 cut(s)	877, 1648
Fsp4HI	GCNGC	8 cut(s)	699, 702, 732, 1566, 1713, 2138, 2275, 2385
FspBI	CTAG	4 cut(s)	221, 1082, 1809, 2264
FspI	TGCGCA	1 cut(s)	1595
GlaI	GCGC	3 cut(s)	1595, 1965, 1967
GluI	GCNGC	8 cut(s)	699, 702, 732, 1566, 1713, 2138, 2275, 2385
GsuI	CTGGAG	3 cut(s)	83, 425, 1086
HaeIII	GGCC	5 cut(s)	153, 674, 875, 1146, 1722
HapII	CCGG	3 cut(s)	529, 1212, 1309
HhaI	GCGC	3 cut(s)	1596, 1966, 1968
Hin6I	GCGC	3 cut(s)	1594, 1964, 1966
HinP1I	GCGC	3 cut(s)	1594, 1964, 1966
HincII	GTYRAC	1 cut(s)	984
HindII	GTYRAC	1 cut(s)	984
HindIII	AAGCTT	1 cut(s)	684
HinfI	GANTC	6 cut(s)	74, 542, 1226, 1463, 1981, 1994
HpaII	CCGG	3 cut(s)	529, 1212, 1309
HphI	GGTGA	1 cut(s)	1375
Hpy166II	GTNNAC	7 cut(s)	984, 1682, 1691, 1783, 1789, 2059, 2365
Hpy188I	TCNGA	7 cut(s)	417, 919, 1357, 1387, 1428, 1632, 2316
Hpy188III	TCNNGA	7 cut(s)	679, 1014, 1065, 1212, 1249, 1309, 2283
Hpy8I	GTNNAC	7 cut(s)	984, 1682, 1691, 1783, 1789, 2059, 2365
Hpy99I	CGWCG	1 cut(s)	19
HpyAV	CCTTC	9 cut(s)	152, 367, 508, 553, 709, 1194, 1648, 1984, 2391
HpyCH4III	ACNGT	6 cut(s)	431, 550, 1667, 1747, 2063, 2445
HpyCH4IV	ACGT	5 cut(s)	7, 755, 1352, 1785, 2164
HpyF10VI	GCNNNNNNNGC	7 cut(s)	778, 1289, 1298, 1602, 1844, 2274, 2362
HpySE526I	ACGT	5 cut(s)	7, 755, 1352, 1785, 2164
HspAI	GCGC	3 cut(s)	1594, 1964, 1966
Kpn2I	TCCGGA	2 cut(s)	1211, 1308
Ksp22I	TGATCA	1 cut(s)	919
Kzo9I	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
LguI	GCTCTTC	1 cut(s)	567
LmnI	GCTCC	3 cut(s)	11, 64, 2120
Lsp1109I	GCAGC	7 cut(s)	685, 688, 718, 1577, 1724, 2149, 2286
LweI	GCATC	7 cut(s)	115, 289, 1087, 1486, 1605, 1623, 1645
MaeI	CTAG	4 cut(s)	221, 1082, 1809, 2264
MaeII	ACGT	5 cut(s)	7, 755, 1352, 1785, 2164
MaeIII	GTNAC	4 cut(s)	3, 850, 1231, 2195
MalI	GATC	6 cut(s)	640, 745, 921, 1012, 1128, 1425
MboI	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
MfeI	CAATTG	1 cut(s)	1659
MflI	RGATCY	1 cut(s)	743
MhlI	GDGCHC	3 cut(s)	877, 1648, 2367
MlyI	GAGTC	1 cut(s)	1472
MmeI	TCCRAC	3 cut(s)	771, 952, 1012
Mph1103I	ATGCAT	2 cut(s)	604, 1638
MroI	TCCGGA	2 cut(s)	1211, 1308
MseI	TTAA	4 cut(s)	927, 1517, 2088, 2126
MslI	CAYNNNNRTG	5 cut(s)	147, 1152, 1794, 2370, 2372
MspCI	CTTAAG	1 cut(s)	926
MspI	CCGG	3 cut(s)	529, 1212, 1309
MspR9I	CCNGG	4 cut(s)	1041, 1724, 1734, 2000
MunI	CAATTG	1 cut(s)	1659
Mva1269I	GAATGC	2 cut(s)	1093, 1481
MvaI	CCWGG	4 cut(s)	1041, 1724, 1734, 2000
MvnI	CGCG	1 cut(s)	1966
MwoI	GCNNNNNNNGC	7 cut(s)	778, 1289, 1298, 1602, 1844, 2274, 2362
NcoI	CCATGG	1 cut(s)	83
NdeII	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
NlaIV	GGNNCC	6 cut(s)	89, 411, 875, 963, 1036, 2328
NmuCI	GTSAC	2 cut(s)	3, 850
NsbI	TGCGCA	1 cut(s)	1595
NsiI	ATGCAT	2 cut(s)	604, 1638
NspI	RCATGY	2 cut(s)	982, 1180
NspV	TTCGAA	1 cut(s)	1741
OliI	CACNNNNGTG	1 cut(s)	1794
PasI	CCCWGGG	1 cut(s)	1040
PauI	GCGCGC	1 cut(s)	1964
PceI	AGGCCT	1 cut(s)	1722
PciSI	GCTCTTC	1 cut(s)	567
PcsI	WCGNNNNNNNCGW	1 cut(s)	23
PctI	GAATGC	2 cut(s)	1093, 1481
PfeI	GAWTC	5 cut(s)	74, 542, 1226, 1981, 1994
PflFI	GACNNNGTC	1 cut(s)	2206
PkrI	GCNGC	8 cut(s)	700, 703, 733, 1567, 1714, 2139, 2276, 2386
PleI	GAGTC	1 cut(s)	1471
PmaCI	CACGTG	1 cut(s)	8
PmlI	CACGTG	1 cut(s)	8
PpsI	GAGTC	1 cut(s)	1471
Ppu21I	YACGTR	1 cut(s)	8
PsiI	TTATAA	1 cut(s)	2097
Psp124BI	GAGCTC	1 cut(s)	1648
Psp1406I	AACGTT	1 cut(s)	755
Psp6I	CCWGG	4 cut(s)	1039, 1722, 1732, 1998
PspCI	CACGTG	1 cut(s)	8
PspGI	CCWGG	4 cut(s)	1039, 1722, 1732, 1998
PspN4I	GGNNCC	6 cut(s)	89, 411, 875, 963, 1036, 2328
PspOMI	GGGCCC	1 cut(s)	873
PspPI	GGNCC	2 cut(s)	873, 874
PstNI	CAGNNNCTG	2 cut(s)	746, 2146
PsuI	RGATCY	1 cut(s)	743
PsyI	GACNNNGTC	1 cut(s)	2206
PteI	GCGCGC	1 cut(s)	1964
RsaI	GTAC	2 cut(s)	1206, 1555
RsaNI	GTAC	2 cut(s)	1205, 1554
RseI	CAYNNNNRTG	5 cut(s)	147, 1152, 1794, 2370, 2372
SacI	GAGCTC	1 cut(s)	1648
SapI	GCTCTTC	1 cut(s)	567
SaqAI	TTAA	4 cut(s)	927, 1517, 2088, 2126
SatI	GCNGC	8 cut(s)	699, 702, 732, 1566, 1713, 2138, 2275, 2385
Sau3AI	GATC	6 cut(s)	638, 743, 919, 1010, 1126, 1423
Sau96I	GGNCC	2 cut(s)	873, 874
SchI	GAGTC	1 cut(s)	1472
ScrFI	CCNGG	4 cut(s)	1041, 1724, 1734, 2000
SduI	GDGCHC	3 cut(s)	877, 1648, 2367
SfaNI	GCATC	7 cut(s)	115, 289, 1087, 1486, 1605, 1623, 1645
SfcI	CTRYAG	2 cut(s)	966, 1371
SfuI	TTCGAA	1 cut(s)	1741
SmiMI	CAYNNNNRTG	5 cut(s)	147, 1152, 1794, 2370, 2372
SmlI	CTYRAG	1 cut(s)	926
SmoI	CTYRAG	1 cut(s)	926
SseBI	AGGCCT	1 cut(s)	1722
SsiI	CCGC	4 cut(s)	734, 1987, 2384, 2458
SspMI	CTAG	4 cut(s)	221, 1082, 1809, 2264
SstI	GAGCTC	1 cut(s)	1648
StuI	AGGCCT	1 cut(s)	1722
StyD4I	CCNGG	4 cut(s)	1039, 1722, 1732, 1998
StyI	CCWWGG	3 cut(s)	83, 312, 1600
TaaI	ACNGT	6 cut(s)	431, 550, 1667, 1747, 2063, 2445
TaiI	ACGT	5 cut(s)	10, 758, 1355, 1788, 2167
TaqI	TCGA	6 cut(s)	156, 241, 641, 1129, 1458, 1741
TatI	WGTACW	1 cut(s)	1553
TauI	GCSGC	1 cut(s)	2387
TfiI	GAWTC	5 cut(s)	74, 542, 1226, 1981, 1994
Tru1I	TTAA	4 cut(s)	927, 1517, 2088, 2126
Tru9I	TTAA	4 cut(s)	927, 1517, 2088, 2126
TscAI	CASTG	4 cut(s)	436, 454, 1822, 2068
TseFI	GTSAC	2 cut(s)	3, 850
TseI	GCWGC	7 cut(s)	698, 701, 731, 1565, 1712, 2137, 2274
Tsp45I	GTSAC	2 cut(s)	3, 850
TspGWI	ACGGA	1 cut(s)	1001
TspRI	CASTG	4 cut(s)	436, 454, 1822, 2068
Tth111I	GACNNNGTC	1 cut(s)	2206
Vha464I	CTTAAG	1 cut(s)	926
VneI	GTGCAC	1 cut(s)	2363
XapI	RAATTY	5 cut(s)	39, 210, 1366, 1865, 2122
XceI	RCATGY	2 cut(s)	982, 1180
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1047
XspI	CTAG	4 cut(s)	221, 1082, 1809, 2264
Zsp2I	ATGCAT	2 cut(s)	604, 1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.