Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004055

Physical Location & Seq

Genomic Coordinates Reverse (-)

4213465 .. 4226764

Gene Structure 13300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G037600.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGCTGCCAACACCTCTCTTGCGTGGATTGAAGAAAAAAGCTAAAAGGAAACAAATTCAACAACAAGATGCAGAACTCGAGCGATTCGAGTCGCTCCCATGGAACCCATCTCTTCCCATTGACGAAGACAAAGCCTTCTCTAATGTCGTCGGCAACAACGAGCTCGAAGGAGGTTTTCTTATGCTTGAAGAGATTGATGAAGCTGAATATGGTTTACAAATTCCTGAACCACAATTAGCAAATAGGAATAAGAAGGAAAAGTCTAAGCAAAGTAAAAAGTCCAAGAAACGGAAGCGTGGTGGGGTCGATGGCTCTGCTGGCGATGGAGCTGAGGCTAAGGGTGAAGAGATATTTGACAAGGATGATAATGAGATGAATAAAGAGAAGAAAAAGAAAAAGAAGCCGGAGGAAGCTCAGGGAAGTGAGAATGTTGCTGGAAATGGTGGCAATGAGGTTAAAAATAAAGACAAGGATGAAGATGTGAATATTAAGAAGAAAAAGAAAAAGCACAAGAAGAAGAAGAAGAAGGCCGGGGAGACCTTGGAAACTGAGGAGAACACAGTTGATGACAGTAGCAATGGCAAGGAAGAAATTGAAGAAGAGCCTTTTGATGAAAATGAATATTATGCATGGAATGAGTTGAGACTCCATCATCTGATTATGAAATCAATATATCGGCTTGGGTTCAAGGAACCAACGCCAATACAGAAAGCTTGTATTCCTGCTGCTGCTCATCAAGGAAAGGACGTTATTGGTGCTGCGGAAACAGGTTCCGGGAAGACTCTAGCTTTTGGTTTGCCCATTTTGCAACGGTTGTTGGAGGAAAGAGAAAAAGCTGTGAAGATGTTTGATGAAAAGGGGGAGGAAACAGAAAAGTTTGCTCCAAAAGGTCTTTTACGGGCCCTTATTATTACTCCCACAAGAGAACTTGCAATTCAGGTCTCTGATCATCTTAAGGCAGTTGCCAAGGATACAAATGTTAGAGTGGTTCCAATAGTTGGAGGGATGTCAATGGAAAAGCAGGAGAGACTTCTAAAAGCAAGGCCTGAGATTATTGTTGGGACTCCTGGAAGATTATGGGAACTTATGTCTGGTGGAGAAAAGCATCTAGTTGAGTTACATTCATTGTCTTTCTTTGTGCTGGACGAGGCTGATCGAATGATAGAAAATGGTCATTTCCGCGAATTGCAGTCAATAATTGACATGCTTCCAGTGAGGAATGGATTAACTGAATCCCATTGTGAAAATGCACAAAATTCTGTGGAGATGTCCAACTTTCAGACGAAGAAAAGACAAACATTTGTTTTCTCTGCTACTATAGCACTATCTACTGATTTTCGTAAGAAGCTAAAGCGTAGTTCACTAAAATCAAAGCAATCAATGTCTGATGGGGTGAATTCTATAGAAGCTCTAAGTGAGCGAGCAGGAATGAGAGACAATGTTGCCATCATTGATCTGACAAATGCATCCATTTTGGCAAATAAGCTTGTGGAGTCATTTATTGAATGCACAGAAGAAGATAAAGACGCCTATTTGTATTATATTTTAAGTGTTCATGGACAAGGTCGCACACTTGTGTTCTGTACGTCAGTTGCAGCGTTGCGACATGTATCATCACTCTTGCGCATTCTTGGAACAAATGTATGGACGCTTCATGCTCAGATGCAGCAGCGAGCTCGCTTGAAGGCAATCGATCGTTTTCGAGGAGATGAACATGGTTTACTTGTGGCCACTGACGTTGCAGCAAGAGGCCTAGATATTCCTGGTGTTCGAACTGTTGTTCACTACCAGCTTCCACATTCAGCAGAAGTTTATGTTCACAGAAGTGGTAGAACTGCTAGAGCTTCTGCTGATGGGTGCAGTATTGCACTAATTGCACCAAATGAGACATCCAAATTCGCTTTGTTGTGCAAATCATTTTCTAAGGAAAGTTTTCAGCGATTTCCCATGGACAACGCATACTTGCCTGAGGTCATCAAACGATTATCTCTTGCGCGTCAAATGGACAAAATTCTCCGGAAGGATTCCCAGGAGAAATCAAAGAAAAGCTGGTTTGAAAGAAATGCAAAATCGATTGAATTAGTTGTGGACAACGATGACAGCGAGGAAGAAAGGGTGAAAAATCATAAGAAAAGGAAAGCCAGCTCCATGAATTTAAACAAGTTGCAGCAGGAGCTCAAGATATTACTTTCGCGCCCATTACAACCGAAGTCATTTTCACATCGTTATTTTGCAGGGGCTGGTGTCTCGCCTCTCATGCAACATCAATTTGAAGAATTGGCTAAGAAAAAACTTGGTGACAATAGTGACTCAGGAGATAAGAAAAAAAGTAAATTGGTAGTTATCGGTCAGGATTGTGTGGAACCACTCCAGGCACTTCGGAGTGCTGGGCATGAGGTGCACATAGATGGGAAAGAGATGGCACAAAAACGAAGAAACATAGTGGATTTGAGGAGGAAAAGAAAAGAGGAGAAAACACGTTTGAGAGATCAACGAAGAAAACGGAAGAAACAGCTTAAAGGGGGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

844

Amino Acids

95.32

Weight (kDa)

9.35

Isoelectric Point (pI)

50.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16840 AT3G16840
fragaria_vesca	FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910
malus_domestica	MD12G1094500.v1.1 MD14G1084300.v1.1
prunus_persica	Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1
pyrus_communis	pycom14g07400
rosa_chinensis	RchiOBHm_Chr3g0492441
rosa_laevigata	RLG00000022766
rosa_multiflora	Rmu_sc0003156.1_g000008 Rmu_sc0007709.1_g000003 Rmu_sc0017916.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392260
rosa_rugosa	Rorug03G0253900
rosa_samantha	Rh3AG304100 Rh3BG340000 Rh3CG337200 Rh3DG339200
rosa_wichuraiana	Rw3G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1625
AccB7I	CCANNNNNTGG	1 cut(s)	998
AccII	CGCG	3 cut(s)	1182, 1996, 2194
AccIII	TCCGGA	1 cut(s)	2016
AciI	CCGC	2 cut(s)	761, 1180
AcoI	YGGCCR	1 cut(s)	1728
AcsI	RAATTY	7 cut(s)	54, 219, 1255, 1396, 1895, 2010, 2152
AcyI	GRCGYC	1 cut(s)	1527
AfaI	GTAC	1 cut(s)	1585
AfiI	CCNNNNNNNGG	2 cut(s)	288, 998
AflII	CTTAAG	1 cut(s)	953
AflIII	ACRYGT	2 cut(s)	1606, 2477
AjnI	CCWGG	4 cut(s)	1066, 1762, 2028, 2370
AleI	CACNNNNGTG	2 cut(s)	1574, 1824
Alw21I	GWGCWC	4 cut(s)	165, 1678, 2178, 2403
Alw26I	GTCTC	7 cut(s)	530, 637, 946, 1021, 1428, 1880, 2251
Alw44I	GTGCAC	1 cut(s)	2399
AlwNI	CAGNNNCTG	1 cut(s)	2240
Ama87I	CYCGRG	1 cut(s)	77
Aor13HI	TCCGGA	1 cut(s)	2016
AoxI	GGCC	5 cut(s)	528, 900, 1043, 1728, 1750
ApaI	GGGCCC	1 cut(s)	904
ApaLI	GTGCAC	1 cut(s)	2399
ApeKI	GCWGC	9 cut(s)	4, 725, 728, 758, 1595, 1666, 1669, 1742, 2167
ApoI	RAATTY	7 cut(s)	54, 219, 1255, 1396, 1895, 2010, 2152
Asp700I	GAANNNNTTC	1 cut(s)	1932
AspLEI	GCGC	3 cut(s)	1626, 1996, 2196
AspS9I	GGNCC	2 cut(s)	900, 901
AsuC2I	CCSGG	2 cut(s)	532, 775
AsuHPI	GGTGA	4 cut(s)	353, 1405, 2128, 2309
AsuII	TTCGAA	1 cut(s)	1771
AvaI	CYCGRG	1 cut(s)	77
AxyI	CCTNAGG	1 cut(s)	1968
BaeGI	GKGCMC	2 cut(s)	904, 2403
BaeI	ACNNNNGTAYC	2 cut(s)	963, 996
BalI	TGGCCA	1 cut(s)	1730
BanII	GRGCYC	4 cut(s)	165, 904, 1678, 2178
BarI	GAAGNNNNNNTAC	2 cut(s)	1635, 1667
BbsI	GAAGAC	2 cut(s)	132, 785
Bbv12I	GWGCWC	4 cut(s)	165, 1678, 2178, 2403
BbvCI	CCTCAGC	1 cut(s)	330
BbvI	GCAGC	8 cut(s)	712, 715, 745, 1607, 1678, 1681, 1754, 2179
BccI	CCATC	9 cut(s)	115, 302, 317, 657, 1382, 1454, 1847, 2402, 2413
BcgI	CGANNNNNNTGC	4 cut(s)	296, 330, 1658, 1692
BciT130I	CCWGG	4 cut(s)	1068, 1764, 2030, 2372
BciVI	GTATCC	1 cut(s)	964
BclI	TGATCA	1 cut(s)	946
BcnI	CCSGG	2 cut(s)	532, 775
BcoDI	GTCTC	7 cut(s)	530, 637, 946, 1021, 1428, 1880, 2251
BfaI	CTAG	4 cut(s)	785, 1109, 1754, 1839
BfmI	CTRYAG	2 cut(s)	1317, 1401
BfrI	CTTAAG	1 cut(s)	953
BfuI	GTATCC	1 cut(s)	964
BisI	GCNGC	9 cut(s)	5, 726, 729, 759, 1596, 1667, 1670, 1743, 2168
BlsI	GCNGC	9 cut(s)	6, 727, 730, 760, 1597, 1668, 1671, 1744, 2169
Bme1390I	CCNGG	6 cut(s)	532, 775, 1068, 1764, 2030, 2372
BmeT110I	CYCGRG	1 cut(s)	77
BmgT120I	GGNCC	2 cut(s)	900, 901
BmiI	GGNNCC	6 cut(s)	104, 693, 772, 902, 990, 2364
BmrFI	CCNGG	6 cut(s)	532, 775, 1068, 1764, 2030, 2372
BmsI	GCATC	4 cut(s)	58, 1114, 1475, 1653
BpiI	GAAGAC	2 cut(s)	132, 785
BpmI	CTGGAG	1 cut(s)	2354
Bpu10I	CCTNAGC	3 cut(s)	330, 336, 414
Bpu14I	TTCGAA	1 cut(s)	1771
BpuEI	CTTGAG	1 cut(s)	2162
BpuMI	CCSGG	2 cut(s)	532, 775
Bsa29I	ATCGAT	2 cut(s)	1692, 2072
BsaHI	GRCGYC	1 cut(s)	1527
BsaI	GGTCTC	2 cut(s)	530, 946
BsaJI	CCNNGG	6 cut(s)	98, 531, 540, 966, 1947, 2028
BsaWI	WCCGGW	1 cut(s)	2016
Bsc4I	CCNNNNNNNGG	2 cut(s)	288, 998
Bse1I	ACTGG	1 cut(s)	1211
Bse21I	CCTNAGG	1 cut(s)	1968
Bse3DI	GCAATG	2 cut(s)	454, 583
BseAI	TCCGGA	1 cut(s)	2016
BseBI	CCWGG	4 cut(s)	1068, 1764, 2030, 2372
BseCI	ATCGAT	2 cut(s)	1692, 2072
BseDI	CCNNGG	6 cut(s)	98, 531, 540, 966, 1947, 2028
BseGI	GGATG	5 cut(s)	367, 478, 1011, 1466, 1889
BseLI	CCNNNNNNNGG	2 cut(s)	288, 998
BseMI	GCAATG	2 cut(s)	454, 583
BseMII	CTCAG	7 cut(s)	321, 428, 540, 1038, 1673, 1959, 2325
BseNI	ACTGG	1 cut(s)	1211
BseRI	GAGGAG	4 cut(s)	566, 1719, 2467, 2483
BseSI	GKGCMC	2 cut(s)	904, 2403
BseXI	GCAGC	8 cut(s)	712, 715, 745, 1607, 1678, 1681, 1754, 2179
BseYI	CCCAGC	1 cut(s)	2387
BsgI	GTGCAG	1 cut(s)	1879
Bsh1236I	CGCG	3 cut(s)	1182, 1996, 2194
Bsh1285I	CGRYCG	1 cut(s)	1696
BshFI	GGCC	5 cut(s)	530, 902, 1045, 1730, 1752
BshVI	ATCGAT	2 cut(s)	1692, 2072
BsiEI	CGRYCG	1 cut(s)	1696
BsiHKAI	GWGCWC	4 cut(s)	165, 1678, 2178, 2403
BsiHKCI	CYCGRG	1 cut(s)	77
BsiSI	CCGG	4 cut(s)	404, 531, 774, 2017
BslFI	GGGAC	1 cut(s)	1075
BslI	CCNNNNNNNGG	2 cut(s)	288, 998
BsmAI	GTCTC	7 cut(s)	530, 637, 946, 1021, 1428, 1880, 2251
BsmFI	GGGAC	1 cut(s)	1075
BsmI	GAATGC	2 cut(s)	1511, 1626
BsnI	GGCC	5 cut(s)	530, 902, 1045, 1730, 1752
Bso31I	GGTCTC	2 cut(s)	530, 946
BsoBI	CYCGRG	1 cut(s)	77
Bsp119I	TTCGAA	1 cut(s)	1771
Bsp120I	GGGCCC	1 cut(s)	900
Bsp1286I	GDGCHC	5 cut(s)	165, 904, 1678, 2178, 2403
Bsp13I	TCCGGA	1 cut(s)	2016
Bsp143I	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
Bsp19I	CCATGG	2 cut(s)	98, 1947
BspACI	CCGC	2 cut(s)	761, 1180
BspANI	GGCC	5 cut(s)	530, 902, 1045, 1730, 1752
BspCNI	CTCAG	7 cut(s)	322, 427, 541, 1039, 1672, 1960, 2324
BspDI	ATCGAT	2 cut(s)	1692, 2072
BspEI	TCCGGA	1 cut(s)	2016
BspFNI	CGCG	3 cut(s)	1182, 1996, 2194
BspLI	GGNNCC	6 cut(s)	104, 693, 772, 902, 990, 2364
BspQI	GCTCTTC	1 cut(s)	594
BspT104I	TTCGAA	1 cut(s)	1771
BspTI	CTTAAG	1 cut(s)	953
BspTNI	GGTCTC	2 cut(s)	530, 946
BsrDI	GCAATG	2 cut(s)	454, 583
BsrI	ACTGG	1 cut(s)	1211
BssECI	CCNNGG	6 cut(s)	98, 531, 540, 966, 1947, 2028
BssMI	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
BssNI	GRCGYC	1 cut(s)	1527
BssT1I	CCWWGG	4 cut(s)	98, 540, 966, 1947
Bst2UI	CCWGG	4 cut(s)	1068, 1764, 2030, 2372
Bst4CI	ACNGT	4 cut(s)	562, 572, 813, 1777
Bst6I	CTCTTC	4 cut(s)	117, 183, 339, 594
BstACI	GRCGYC	1 cut(s)	1527
BstAFI	CTTAAG	1 cut(s)	953
BstAPI	GCANNNNNTGC	2 cut(s)	1874, 2398
BstBI	TTCGAA	1 cut(s)	1771
BstC8I	GCNNGC	5 cut(s)	319, 1422, 1674, 1678, 2143
BstDSI	CCRYGG	2 cut(s)	98, 1947
BstF5I	GGATG	5 cut(s)	367, 478, 1011, 1466, 1889
BstFNI	CGCG	3 cut(s)	1182, 1996, 2194
BstHHI	GCGC	3 cut(s)	1626, 1996, 2196
BstKTI	GATC	5 cut(s)	949, 1156, 1456, 1696, 2491
BstMAI	GTCTC	7 cut(s)	530, 637, 946, 1021, 1428, 1880, 2251
BstMBI	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
BstMCI	CGRYCG	1 cut(s)	1696
BstMWI	GCNNNNNNNGC	7 cut(s)	318, 805, 1319, 1874, 2173, 2257, 2398
BstNI	CCWGG	4 cut(s)	1068, 1764, 2030, 2372
BstNSI	RCATGY	2 cut(s)	1207, 1610
BstSCI	CCNGG	6 cut(s)	530, 773, 1066, 1762, 2028, 2370
BstSFI	CTRYAG	2 cut(s)	1317, 1401
BstSLI	GKGCMC	2 cut(s)	904, 2403
BstUI	CGCG	3 cut(s)	1182, 1996, 2194
BstV1I	GCAGC	8 cut(s)	712, 715, 745, 1607, 1678, 1681, 1754, 2179
BstV2I	GAAGAC	2 cut(s)	132, 785
Bsu15I	ATCGAT	2 cut(s)	1692, 2072
Bsu36I	CCTNAGG	1 cut(s)	1968
BsuI	GTATCC	1 cut(s)	964
BsuRI	GGCC	5 cut(s)	530, 902, 1045, 1730, 1752
BsuTUI	ATCGAT	2 cut(s)	1692, 2072
BtgI	CCRYGG	2 cut(s)	98, 1947
BtgZI	GCGATG	1 cut(s)	336
BtsCI	GGATG	5 cut(s)	367, 478, 1011, 1466, 1889
BtsIMutI	CAGTG	2 cut(s)	1218, 1731
Cac8I	GCNNGC	5 cut(s)	319, 1422, 1674, 1678, 2143
CaiI	CAGNNNCTG	1 cut(s)	2240
CfoI	GCGC	3 cut(s)	1626, 1996, 2196
Cfr13I	GGNCC	2 cut(s)	900, 901
ClaI	ATCGAT	2 cut(s)	1692, 2072
CseI	GACGC	3 cut(s)	1535, 1657, 1985
Csp6I	GTAC	1 cut(s)	1584
CspCI	CAANNNNNGTGG	2 cut(s)	1720, 1755
CviQI	GTAC	1 cut(s)	1584
DpnI	GATC	5 cut(s)	948, 1155, 1455, 1695, 2490
DpnII	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
DraI	TTTAAA	1 cut(s)	2157
EaeI	YGGCCR	1 cut(s)	1728
Eam1104I	CTCTTC	4 cut(s)	117, 183, 339, 594
EarI	CTCTTC	4 cut(s)	117, 183, 339, 594
Ecl136II	GAGCTC	3 cut(s)	163, 1676, 2176
Eco130I	CCWWGG	4 cut(s)	98, 540, 966, 1947
Eco147I	AGGCCT	2 cut(s)	1045, 1752
Eco24I	GRGCYC	4 cut(s)	165, 904, 1678, 2178
Eco31I	GGTCTC	2 cut(s)	530, 946
Eco53kI	GAGCTC	3 cut(s)	163, 1676, 2176
Eco81I	CCTNAGG	1 cut(s)	1968
Eco88I	CYCGRG	1 cut(s)	77
EcoICRI	GAGCTC	3 cut(s)	163, 1676, 2176
EcoO109I	RGGNCCY	1 cut(s)	901
EcoRI	GAATTC	1 cut(s)	1396
EcoRII	CCWGG	4 cut(s)	1066, 1762, 2028, 2370
EcoT14I	CCWWGG	4 cut(s)	98, 540, 966, 1947
EcoT22I	ATGCAT	2 cut(s)	631, 1468
EcoT38I	GRGCYC	4 cut(s)	165, 904, 1678, 2178
ErhI	CCWWGG	4 cut(s)	98, 540, 966, 1947
FaqI	GGGAC	1 cut(s)	1075
FbaI	TGATCA	1 cut(s)	946
Fnu4HI	GCNGC	9 cut(s)	5, 726, 729, 759, 1596, 1667, 1670, 1743, 2168
FokI	GGATG	5 cut(s)	374, 485, 1018, 1453, 1876
FriOI	GRGCYC	4 cut(s)	165, 904, 1678, 2178
Fsp4HI	GCNGC	9 cut(s)	5, 726, 729, 759, 1596, 1667, 1670, 1743, 2168
FspBI	CTAG	4 cut(s)	785, 1109, 1754, 1839
FspI	TGCGCA	1 cut(s)	1625
GlaI	GCGC	3 cut(s)	1625, 1995, 2195
GluI	GCNGC	9 cut(s)	5, 726, 729, 759, 1596, 1667, 1670, 1743, 2168
GsaI	CCCAGC	1 cut(s)	2391
GsuI	CTGGAG	1 cut(s)	2354
HaeIII	GGCC	5 cut(s)	530, 902, 1045, 1730, 1752
HapII	CCGG	4 cut(s)	404, 531, 774, 2017
HgaI	GACGC	3 cut(s)	1535, 1657, 1985
HhaI	GCGC	3 cut(s)	1626, 1996, 2196
Hin1I	GRCGYC	1 cut(s)	1527
Hin6I	GCGC	3 cut(s)	1624, 1994, 2194
HinP1I	GCGC	3 cut(s)	1624, 1994, 2194
HindIII	AAGCTT	2 cut(s)	711, 1484
HinfI	GANTC	9 cut(s)	84, 89, 645, 781, 1063, 1232, 1493, 2024, 2309
HpaII	CCGG	4 cut(s)	404, 531, 774, 2017
HphI	GGTGA	4 cut(s)	353, 1405, 2128, 2309
Hpy166II	GTNNAC	7 cut(s)	215, 1361, 1721, 1783, 1819, 2089, 2401
Hpy188I	TCNGA	7 cut(s)	657, 946, 1281, 1387, 1458, 1662, 2382
Hpy188III	TCNNGA	5 cut(s)	224, 2017, 2179, 2313, 2351
Hpy8I	GTNNAC	7 cut(s)	215, 1361, 1721, 1783, 1819, 2089, 2401
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	6 cut(s)	145, 161, 247, 520, 1678, 2014
HpyCH4III	ACNGT	4 cut(s)	562, 572, 813, 1777
HpyCH4IV	ACGT	4 cut(s)	747, 1586, 1737, 2479
HpyF10VI	GCNNNNNNNGC	7 cut(s)	318, 805, 1319, 1874, 2173, 2257, 2398
HpySE526I	ACGT	4 cut(s)	747, 1586, 1737, 2479
Hsp92I	GRCGYC	1 cut(s)	1527
HspAI	GCGC	3 cut(s)	1624, 1994, 2194
Kpn2I	TCCGGA	1 cut(s)	2016
Ksp22I	TGATCA	1 cut(s)	946
Kzo9I	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
LguI	GCTCTTC	1 cut(s)	594
LmnI	GCTCC	5 cut(s)	99, 326, 886, 2150, 2173
Lsp1109I	GCAGC	8 cut(s)	712, 715, 745, 1607, 1678, 1681, 1754, 2179
LweI	GCATC	4 cut(s)	58, 1114, 1475, 1653
MaeI	CTAG	4 cut(s)	785, 1109, 1754, 1839
MaeII	ACGT	4 cut(s)	747, 1586, 1737, 2479
MaeIII	GTNAC	3 cut(s)	1116, 2297, 2306
MalI	GATC	5 cut(s)	948, 1155, 1455, 1695, 2490
MboI	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
MhlI	GDGCHC	5 cut(s)	165, 904, 1678, 2178, 2403
MlsI	TGGCCA	1 cut(s)	1730
MluNI	TGGCCA	1 cut(s)	1730
MlyI	GAGTC	6 cut(s)	98, 639, 775, 1057, 1502, 2303
MmeI	TCCRAC	3 cut(s)	798, 979, 1296
Mox20I	TGGCCA	1 cut(s)	1730
Mph1103I	ATGCAT	2 cut(s)	631, 1468
MroI	TCCGGA	1 cut(s)	2016
MroXI	GAANNNNTTC	1 cut(s)	1932
MscI	TGGCCA	1 cut(s)	1730
MseI	TTAA	7 cut(s)	456, 489, 954, 1226, 1547, 2156, 2517
MslI	CAYNNNNRTG	3 cut(s)	1574, 1824, 2406
Msp20I	TGGCCA	1 cut(s)	1730
MspCI	CTTAAG	1 cut(s)	953
MspI	CCGG	4 cut(s)	404, 531, 774, 2017
MspR9I	CCNGG	6 cut(s)	532, 775, 1068, 1764, 2030, 2372
Mva1269I	GAATGC	2 cut(s)	1511, 1626
MvaI	CCWGG	4 cut(s)	1068, 1764, 2030, 2372
MvnI	CGCG	3 cut(s)	1182, 1996, 2194
MwoI	GCNNNNNNNGC	7 cut(s)	318, 805, 1319, 1874, 2173, 2257, 2398
NciI	CCSGG	2 cut(s)	532, 775
NcoI	CCATGG	2 cut(s)	98, 1947
NdeII	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
NlaIV	GGNNCC	6 cut(s)	104, 693, 772, 902, 990, 2364
NmuCI	GTSAC	2 cut(s)	2297, 2306
NsbI	TGCGCA	1 cut(s)	1625
NsiI	ATGCAT	2 cut(s)	631, 1468
NspI	RCATGY	2 cut(s)	1207, 1610
NspV	TTCGAA	1 cut(s)	1771
OliI	CACNNNNGTG	2 cut(s)	1574, 1824
PaeR7I	CTCGAG	1 cut(s)	77
PceI	AGGCCT	2 cut(s)	1045, 1752
PciI	ACATGT	1 cut(s)	1606
PciSI	GCTCTTC	1 cut(s)	594
PcsI	WCGNNNNNNNCGW	3 cut(s)	84, 156, 2100
PctI	GAATGC	2 cut(s)	1511, 1626
PdmI	GAANNNNTTC	1 cut(s)	1932
PfeI	GAWTC	3 cut(s)	84, 1232, 2024
PflFI	GACNNNGTC	1 cut(s)	1563
PflMI	CCANNNNNTGG	1 cut(s)	998
PfoI	TCCNGGA	2 cut(s)	773, 1066
PkrI	GCNGC	9 cut(s)	6, 727, 730, 760, 1597, 1668, 1671, 1744, 2169
Ple19I	CGATCG	1 cut(s)	1696
PleI	GAGTC	6 cut(s)	97, 639, 775, 1057, 1501, 2303
PpsI	GAGTC	6 cut(s)	97, 639, 775, 1057, 1501, 2303
PscI	ACATGT	1 cut(s)	1606
Psp124BI	GAGCTC	3 cut(s)	165, 1678, 2178
Psp6I	CCWGG	4 cut(s)	1066, 1762, 2028, 2370
PspFI	CCCAGC	1 cut(s)	2387
PspGI	CCWGG	4 cut(s)	1066, 1762, 2028, 2370
PspN4I	GGNNCC	6 cut(s)	104, 693, 772, 902, 990, 2364
PspOMI	GGGCCC	1 cut(s)	900
PspPI	GGNCC	2 cut(s)	900, 901
PspXI	VCTCGAGB	1 cut(s)	77
PsrI	GAACNNNNNNTAC	2 cut(s)	1704, 1736
PstNI	CAGNNNCTG	1 cut(s)	2240
PsyI	GACNNNGTC	1 cut(s)	1563
PvuI	CGATCG	1 cut(s)	1696
RsaI	GTAC	1 cut(s)	1585
RsaNI	GTAC	1 cut(s)	1584
RseI	CAYNNNNRTG	3 cut(s)	1574, 1824, 2406
SacI	GAGCTC	3 cut(s)	165, 1678, 2178
SapI	GCTCTTC	1 cut(s)	594
SaqAI	TTAA	7 cut(s)	456, 489, 954, 1226, 1547, 2156, 2517
SatI	GCNGC	9 cut(s)	5, 726, 729, 759, 1596, 1667, 1670, 1743, 2168
Sau3AI	GATC	5 cut(s)	946, 1153, 1453, 1693, 2488
Sau96I	GGNCC	2 cut(s)	900, 901
SchI	GAGTC	6 cut(s)	98, 639, 775, 1057, 1502, 2303
ScrFI	CCNGG	6 cut(s)	532, 775, 1068, 1764, 2030, 2372
SduI	GDGCHC	5 cut(s)	165, 904, 1678, 2178, 2403
SfaNI	GCATC	4 cut(s)	58, 1114, 1475, 1653
SfcI	CTRYAG	2 cut(s)	1317, 1401
Sfr274I	CTCGAG	1 cut(s)	77
SfuI	TTCGAA	1 cut(s)	1771
SlaI	CTCGAG	1 cut(s)	77
SmiMI	CAYNNNNRTG	3 cut(s)	1574, 1824, 2406
SmlI	CTYRAG	3 cut(s)	77, 953, 2177
SmoI	CTYRAG	3 cut(s)	77, 953, 2177
SseBI	AGGCCT	2 cut(s)	1045, 1752
SsiI	CCGC	2 cut(s)	761, 1180
SspI	AATATT	2 cut(s)	487, 623
SspMI	CTAG	4 cut(s)	785, 1109, 1754, 1839
SstI	GAGCTC	3 cut(s)	165, 1678, 2178
StuI	AGGCCT	2 cut(s)	1045, 1752
StyD4I	CCNGG	6 cut(s)	530, 773, 1066, 1762, 2028, 2370
StyI	CCWWGG	4 cut(s)	98, 540, 966, 1947
TaaI	ACNGT	4 cut(s)	562, 572, 813, 1777
TaiI	ACGT	4 cut(s)	750, 1589, 1740, 2482
TaqI	TCGA	9 cut(s)	78, 87, 165, 306, 1156, 1692, 1702, 1771, 2072
TaqII	GACCGA	1 cut(s)	2336
TfiI	GAWTC	3 cut(s)	84, 1232, 2024
Tru1I	TTAA	7 cut(s)	456, 489, 954, 1226, 1547, 2156, 2517
Tru9I	TTAA	7 cut(s)	456, 489, 954, 1226, 1547, 2156, 2517
TscAI	CASTG	2 cut(s)	1218, 1738
TseFI	GTSAC	2 cut(s)	2297, 2306
TseI	GCWGC	9 cut(s)	4, 725, 728, 758, 1595, 1666, 1669, 1742, 2167
Tsp45I	GTSAC	2 cut(s)	2297, 2306
TspGWI	ACGGA	2 cut(s)	304, 2518
TspRI	CASTG	2 cut(s)	1218, 1738
Tth111I	GACNNNGTC	1 cut(s)	1563
Van91I	CCANNNNNTGG	1 cut(s)	998
Vha464I	CTTAAG	1 cut(s)	953
VneI	GTGCAC	1 cut(s)	2399
XapI	RAATTY	7 cut(s)	54, 219, 1255, 1396, 1895, 2010, 2152
XceI	RCATGY	2 cut(s)	1207, 1610
XhoI	CTCGAG	1 cut(s)	77
XmnI	GAANNNNTTC	1 cut(s)	1932
XspI	CTAG	4 cut(s)	785, 1109, 1754, 1839
Zsp2I	ATGCAT	2 cut(s)	631, 1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.