Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017916.1

Orthogroup ID

OG0004055

Physical Location & Seq

Genomic Coordinates Reverse (-)

269 .. 7253

Gene Structure 6985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017916.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

atgagatcgatatacaggcttgggttcaaagaaccaacggccatccagaaagcttgtattcctgctgctgctcatcaagggaaggatgttgttggtgctgcggaaacaggatctggcaaaacgttagcttttggtctgccgattttgcaacgcctgttggacgaaagagaaaaggctgtgaagatgtttgaagaaaagggagaggaagcagaaaaagtcacttcaaaaggctttttacgggcccttgttattactcctacaagagaactttcacttcaggtctctgatcatcttaaggcagttgctaaagatactgatattagagtggttcctatagttggaggcatgtcaacggacaagcaggagagacttcttagatcaagacctgagattgttgttggaaccccagggagattatgggaacttatgtctggaggagaaaagcatctagttgagttgcattcattgtctttctttgtgctggatgaggctgatcgaatgatagaaaacggccatttccatgaattgcagtctattattgacatgcttccttcaaggaatagttctgccgtacattccggaaatgcacaagattctgttaccacgaccaacttccagaggaagaagagacaaacatttgttttatctgcaacaatagcactttctgctgatttccggaaaaagctgaagcgtagttccctaaaaccaaagcaatcaacgtctgatggggtgaattctatagaagctctctctgagcgagcagggatgagagacaatgttgccatcattgatctgacaaatacatccattttggcgaataagctcgaagagtcatttattgaatgcagggaagaagacaaagatgcctatttgtattatatattaagtgttcatgggcaaggtcgcacaatcatattctgtacatccattgcagctttgcgacatataacatcgctcttgcgcatccttggcacagatgttttgacacttcatgctcagatgcatcagcgagctcgtttgaaggcaattgaccgttttagggggagtgaacatggtaaacttgtggctactgatgttgcagcaagaggcctggatattcctggtgttcgaacagttattcactaccagcttccccattcagcagaagtttacgttcacagaagtggtagaactgctagagccactgctgatgggtgtagcattgcactaattgcaccaaatgagacatccaaatttgcttctttgtgcaaatcattttctaaggtaagttttcaacgatttcctttggagaactcatacttcccagaggttatgagacgattatctcttgcgcgccaaatagacaagattctgcggaaggattcccaggacaaagcaaagaaaagctggtatgaaagaaatgcagaattggttgaattggttgtggacagtgatgaggatgaagaggatagagttaaaaattataagcaaaagaaagccagctccatgaatttaaaaagtttgcagcaggaactgaagatgttgctttcacgtccattacaaccgaagtcattttcacatcgttacttgactgggtctggtatcacacctctggtgcaacatcaatttgaagaattggctaagcaaaaactaggcgatagcagcaactcaggaaaaagaagtaaattgttagttattggtcagaattgtgtggaaccactccaagcacttaggagttctgggcatgaggtgcacatagatgtgaaagaggcggcacaaaaacgaaggaatatggagaacctaaggaggaaaagaaaagaggagaaaaaacggttgagagatgaccgcagaaagaggaagaaacagctaaaagggggagaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

620

Amino Acids

69.85

Weight (kDa)

9.72

Isoelectric Point (pI)

50.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16840 AT3G16840
fragaria_vesca	FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910 FvH4_1g29910
malus_domestica	MD12G1094500.v1.1 MD14G1084300.v1.1
prunus_persica	Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1 Prupe.5G037600_v2.0.a1
pyrus_communis	pycom14g07400
rosa_chinensis	RchiOBHm_Chr3g0492441
rosa_laevigata	RLG00000022766
rosa_multiflora	Rmu_sc0003156.1_g000008 Rmu_sc0007709.1_g000003 Rmu_sc0017916.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392260
rosa_rugosa	Rorug03G0253900
rosa_samantha	Rh3AG304100 Rh3BG340000 Rh3CG337200 Rh3DG339200
rosa_wichuraiana	Rw3G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1464
Acc16I	TGCGCA	1 cut(s)	962
AccII	CGCG	1 cut(s)	1333
AccIII	TCCGGA	2 cut(s)	578, 675
AciI	CCGC	4 cut(s)	101, 1354, 1751, 1825
AclI	AACGTT	1 cut(s)	122
AclWI	GGATC	1 cut(s)	118
AcoI	YGGCCR	2 cut(s)	39, 511
AcsI	RAATTY	3 cut(s)	733, 1232, 1489
AcuI	CTGAAG	3 cut(s)	260, 707, 1535
AfaI	GTAC	2 cut(s)	573, 922
AfiI	CCNNNNNNNGG	2 cut(s)	338, 1039
AflII	CTTAAG	1 cut(s)	293
AgsI	TTSAA	9 cut(s)	28, 191, 225, 555, 842, 1021, 1274, 1415, 1610
AjiI	CACGTC	1 cut(s)	1532
AjnI	CCWGG	4 cut(s)	406, 1089, 1099, 1365
AleI	CACNNNNGTG	1 cut(s)	1161
Alw21I	GWGCWC	2 cut(s)	1015, 1734
Alw26I	GTCTC	6 cut(s)	286, 361, 622, 765, 1217, 1309
Alw44I	GTGCAC	1 cut(s)	1730
AlwI	GGATC	1 cut(s)	118
AlwNI	CAGNNNCTG	2 cut(s)	113, 1513
Aor13HI	TCCGGA	2 cut(s)	578, 675
AoxI	GGCC	4 cut(s)	39, 240, 511, 1087
ApaI	GGGCCC	1 cut(s)	244
ApaLI	GTGCAC	1 cut(s)	1730
ApeKI	GCWGC	7 cut(s)	65, 68, 98, 932, 1079, 1504, 1641
ApoI	RAATTY	3 cut(s)	733, 1232, 1489
AspLEI	GCGC	3 cut(s)	963, 1333, 1335
AspS9I	GGNCC	2 cut(s)	240, 241
AsuHPI	GGTGA	1 cut(s)	742
AsuII	TTCGAA	1 cut(s)	1108
AxyI	CCTNAGG	1 cut(s)	1781
BaeGI	GKGCMC	2 cut(s)	244, 1734
BanII	GRGCYC	2 cut(s)	244, 1015
BbsI	GAAGAC	1 cut(s)	861
Bbv12I	GWGCWC	2 cut(s)	1015, 1734
BbvI	GCAGC	7 cut(s)	52, 55, 85, 944, 1091, 1516, 1653
BccI	CCATC	4 cut(s)	50, 719, 791, 1184
BceAI	ACGGC	3 cut(s)	54, 526, 554
BciT130I	CCWGG	4 cut(s)	408, 1091, 1101, 1367
BclI	TGATCA	1 cut(s)	286
BcoDI	GTCTC	6 cut(s)	286, 361, 622, 765, 1217, 1309
BfaI	CTAG	3 cut(s)	449, 1176, 1631
BfmI	CTRYAG	2 cut(s)	333, 738
BfrI	CTTAAG	1 cut(s)	293
BisI	GCNGC	8 cut(s)	66, 69, 99, 933, 1080, 1505, 1642, 1752
BlpI	GCTNAGC	1 cut(s)	1620
BlsI	GCNGC	8 cut(s)	67, 70, 100, 934, 1081, 1506, 1643, 1753
Bme1390I	CCNGG	4 cut(s)	408, 1091, 1101, 1367
BmgBI	CACGTC	1 cut(s)	1532
BmgT120I	GGNCC	2 cut(s)	240, 241
BmiI	GGNNCC	4 cut(s)	242, 330, 403, 1695
BmrFI	CCNGG	4 cut(s)	408, 1091, 1101, 1367
BmrI	ACTGGG	1 cut(s)	1581
BmsI	GCATC	5 cut(s)	454, 853, 972, 990, 1012
BmuI	ACTGGG	1 cut(s)	1581
BpiI	GAAGAC	1 cut(s)	861
BpmI	CTGGAG	1 cut(s)	453
Bpu1102I	GCTNAGC	1 cut(s)	1620
Bpu14I	TTCGAA	1 cut(s)	1108
Bsa29I	ATCGAT	1 cut(s)	8
BsaI	GGTCTC	1 cut(s)	286
BsaJI	CCNNGG	4 cut(s)	406, 407, 967, 1365
BsaWI	WCCGGW	2 cut(s)	578, 675
Bsc4I	CCNNNNNNNGG	2 cut(s)	338, 1039
Bse1I	ACTGG	1 cut(s)	1576
Bse21I	CCTNAGG	1 cut(s)	1781
Bse3DI	GCAATG	2 cut(s)	927, 1200
BseAI	TCCGGA	2 cut(s)	578, 675
BseBI	CCWGG	4 cut(s)	408, 1091, 1101, 1367
BseCI	ATCGAT	1 cut(s)	8
BseDI	CCNNGG	4 cut(s)	406, 407, 967, 1365
BseGI	GGATG	9 cut(s)	42, 91, 490, 771, 803, 923, 963, 1226, 1444
BseLI	CCNNNNNNNGG	2 cut(s)	338, 1039
BseMI	GCAATG	2 cut(s)	927, 1200
BseMII	CTCAG	4 cut(s)	378, 744, 1010, 1662
BseNI	ACTGG	1 cut(s)	1576
BsePI	GCGCGC	1 cut(s)	1331
BseRI	GAGGAG	2 cut(s)	450, 1814
BseSI	GKGCMC	2 cut(s)	244, 1734
BseXI	GCAGC	7 cut(s)	52, 55, 85, 944, 1091, 1516, 1653
Bsh1236I	CGCG	1 cut(s)	1333
BshFI	GGCC	4 cut(s)	41, 242, 513, 1089
BshVI	ATCGAT	1 cut(s)	8
BsiHKAI	GWGCWC	2 cut(s)	1015, 1734
BsiSI	CCGG	2 cut(s)	579, 676
BslI	CCNNNNNNNGG	2 cut(s)	338, 1039
BsmAI	GTCTC	6 cut(s)	286, 361, 622, 765, 1217, 1309
BsmBI	CGTCTC	1 cut(s)	1309
BsmI	GAATGC	2 cut(s)	460, 848
BsnI	GGCC	4 cut(s)	41, 242, 513, 1089
Bso31I	GGTCTC	1 cut(s)	286
Bsp119I	TTCGAA	1 cut(s)	1108
Bsp120I	GGGCCC	1 cut(s)	240
Bsp1286I	GDGCHC	3 cut(s)	244, 1015, 1734
Bsp13I	TCCGGA	2 cut(s)	578, 675
Bsp1407I	TGTACA	1 cut(s)	920
Bsp143I	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
Bsp1720I	GCTNAGC	1 cut(s)	1620
BspACI	CCGC	4 cut(s)	101, 1354, 1751, 1825
BspANI	GGCC	4 cut(s)	41, 242, 513, 1089
BspCNI	CTCAG	4 cut(s)	379, 745, 1009, 1661
BspDI	ATCGAT	1 cut(s)	8
BspEI	TCCGGA	2 cut(s)	578, 675
BspFNI	CGCG	1 cut(s)	1333
BspLI	GGNNCC	4 cut(s)	242, 330, 403, 1695
BspPI	GGATC	1 cut(s)	118
BspT104I	TTCGAA	1 cut(s)	1108
BspTI	CTTAAG	1 cut(s)	293
BspTNI	GGTCTC	1 cut(s)	286
BsrDI	GCAATG	2 cut(s)	927, 1200
BsrGI	TGTACA	1 cut(s)	920
BsrI	ACTGG	1 cut(s)	1576
BssECI	CCNNGG	4 cut(s)	406, 407, 967, 1365
BssHII	GCGCGC	1 cut(s)	1331
BssMI	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
BssT1I	CCWWGG	1 cut(s)	967
Bst2UI	CCWGG	4 cut(s)	408, 1091, 1101, 1367
Bst4CI	ACNGT	4 cut(s)	1034, 1114, 1430, 1812
Bst6I	CTCTTC	3 cut(s)	620, 822, 1437
BstAFI	CTTAAG	1 cut(s)	293
BstAPI	GCANNNNNTGC	3 cut(s)	665, 1211, 1729
BstAUI	TGTACA	1 cut(s)	920
BstBI	TTCGAA	1 cut(s)	1108
BstC8I	GCNNGC	4 cut(s)	759, 1011, 1333, 1480
BstDEI	CTNAG	9 cut(s)	374, 387, 753, 996, 1260, 1620, 1648, 1709, 1781
BstF5I	GGATG	9 cut(s)	42, 91, 490, 771, 803, 923, 963, 1226, 1444
BstFNI	CGCG	1 cut(s)	1333
BstHHI	GCGC	3 cut(s)	963, 1333, 1335
BstKTI	GATC	6 cut(s)	8, 113, 289, 380, 496, 793
BstMAI	GTCTC	6 cut(s)	286, 361, 622, 765, 1217, 1309
BstMBI	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
BstMWI	GCNNNNNNNGC	7 cut(s)	145, 656, 665, 969, 1211, 1641, 1729
BstNI	CCWGG	4 cut(s)	408, 1091, 1101, 1367
BstNSI	RCATGY	2 cut(s)	349, 547
BstSCI	CCNGG	4 cut(s)	406, 1089, 1099, 1365
BstSFI	CTRYAG	2 cut(s)	333, 738
BstSLI	GKGCMC	2 cut(s)	244, 1734
BstUI	CGCG	1 cut(s)	1333
BstV1I	GCAGC	7 cut(s)	52, 55, 85, 944, 1091, 1516, 1653
BstV2I	GAAGAC	1 cut(s)	861
BstX2I	RGATCY	1 cut(s)	110
BstYI	RGATCY	1 cut(s)	110
Bsu15I	ATCGAT	1 cut(s)	8
Bsu36I	CCTNAGG	1 cut(s)	1781
BsuRI	GGCC	4 cut(s)	41, 242, 513, 1089
BsuTUI	ATCGAT	1 cut(s)	8
BtgZI	GCGATG	1 cut(s)	936
BtrI	CACGTC	1 cut(s)	1532
BtsCI	GGATG	9 cut(s)	42, 91, 490, 771, 803, 923, 963, 1226, 1444
BtsI	GCAGTG	1 cut(s)	1182
BtsIMutI	CAGTG	2 cut(s)	1182, 1435
Cac8I	GCNNGC	4 cut(s)	759, 1011, 1333, 1480
CaiI	CAGNNNCTG	2 cut(s)	113, 1513
CfoI	GCGC	3 cut(s)	963, 1333, 1335
Cfr13I	GGNCC	2 cut(s)	240, 241
ClaI	ATCGAT	1 cut(s)	8
Csp6I	GTAC	2 cut(s)	572, 921
CviAII	CATG	8 cut(s)	346, 521, 544, 893, 992, 1052, 1486, 1724
CviQI	GTAC	2 cut(s)	572, 921
DdeI	CTNAG	9 cut(s)	374, 387, 753, 996, 1260, 1620, 1648, 1709, 1781
DpnI	GATC	6 cut(s)	7, 112, 288, 379, 495, 792
DpnII	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
DraI	TTTAAA	1 cut(s)	1494
EaeI	YGGCCR	2 cut(s)	39, 511
Eam1104I	CTCTTC	3 cut(s)	620, 822, 1437
EarI	CTCTTC	3 cut(s)	620, 822, 1437
Ecl136II	GAGCTC	1 cut(s)	1013
Eco130I	CCWWGG	1 cut(s)	967
Eco147I	AGGCCT	1 cut(s)	1089
Eco24I	GRGCYC	2 cut(s)	244, 1015
Eco31I	GGTCTC	1 cut(s)	286
Eco53kI	GAGCTC	1 cut(s)	1013
Eco57I	CTGAAG	3 cut(s)	260, 707, 1535
Eco81I	CCTNAGG	1 cut(s)	1781
EcoICRI	GAGCTC	1 cut(s)	1013
EcoO109I	RGGNCCY	1 cut(s)	241
EcoRI	GAATTC	1 cut(s)	733
EcoRII	CCWGG	4 cut(s)	406, 1089, 1099, 1365
EcoT14I	CCWWGG	1 cut(s)	967
EcoT22I	ATGCAT	1 cut(s)	1005
EcoT38I	GRGCYC	2 cut(s)	244, 1015
ErhI	CCWWGG	1 cut(s)	967
Esp3I	CGTCTC	1 cut(s)	1309
FaeI	CATG	8 cut(s)	349, 524, 547, 896, 995, 1055, 1489, 1727
FatI	CATG	8 cut(s)	345, 520, 543, 892, 991, 1051, 1485, 1723
FbaI	TGATCA	1 cut(s)	286
Fnu4HI	GCNGC	8 cut(s)	66, 69, 99, 933, 1080, 1505, 1642, 1752
FokI	GGATG	9 cut(s)	29, 98, 497, 778, 790, 910, 950, 1213, 1451
FriOI	GRGCYC	2 cut(s)	244, 1015
Fsp4HI	GCNGC	8 cut(s)	66, 69, 99, 933, 1080, 1505, 1642, 1752
FspBI	CTAG	3 cut(s)	449, 1176, 1631
FspI	TGCGCA	1 cut(s)	962
GlaI	GCGC	3 cut(s)	962, 1332, 1334
GluI	GCNGC	8 cut(s)	66, 69, 99, 933, 1080, 1505, 1642, 1752
GsuI	CTGGAG	1 cut(s)	453
HaeIII	GGCC	4 cut(s)	41, 242, 513, 1089
HapII	CCGG	2 cut(s)	579, 676
HhaI	GCGC	3 cut(s)	963, 1333, 1335
Hin1II	CATG	8 cut(s)	349, 524, 547, 896, 995, 1055, 1489, 1727
Hin6I	GCGC	3 cut(s)	961, 1331, 1333
HinP1I	GCGC	3 cut(s)	961, 1331, 1333
HincII	GTYRAC	1 cut(s)	351
HindII	GTYRAC	1 cut(s)	351
HindIII	AAGCTT	1 cut(s)	51
HinfI	GANTC	4 cut(s)	593, 830, 1348, 1361
HpaII	CCGG	2 cut(s)	579, 676
HphI	GGTGA	1 cut(s)	742
Hpy166II	GTNNAC	7 cut(s)	351, 1049, 1058, 1150, 1156, 1426, 1732
Hpy188I	TCNGA	6 cut(s)	286, 724, 754, 795, 999, 1683
Hpy188III	TCNNGA	7 cut(s)	46, 381, 432, 579, 616, 676, 1650
Hpy8I	GTNNAC	7 cut(s)	351, 1049, 1058, 1150, 1156, 1426, 1732
HpyAV	CCTTC	5 cut(s)	76, 561, 1015, 1351, 1758
HpyCH4III	ACNGT	4 cut(s)	1034, 1114, 1430, 1812
HpyCH4IV	ACGT	4 cut(s)	122, 719, 1152, 1531
HpyF10VI	GCNNNNNNNGC	7 cut(s)	145, 656, 665, 969, 1211, 1641, 1729
HpyF3I	CTNAG	9 cut(s)	374, 387, 753, 996, 1260, 1620, 1648, 1709, 1781
HpySE526I	ACGT	4 cut(s)	122, 719, 1152, 1531
Hsp92II	CATG	8 cut(s)	349, 524, 547, 896, 995, 1055, 1489, 1727
HspAI	GCGC	3 cut(s)	961, 1331, 1333
Kpn2I	TCCGGA	2 cut(s)	578, 675
Ksp22I	TGATCA	1 cut(s)	286
Kzo9I	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
LmnI	GCTCC	1 cut(s)	1487
Lsp1109I	GCAGC	7 cut(s)	52, 55, 85, 944, 1091, 1516, 1653
LweI	GCATC	5 cut(s)	454, 853, 972, 990, 1012
MaeI	CTAG	3 cut(s)	449, 1176, 1631
MaeII	ACGT	4 cut(s)	122, 719, 1152, 1531
MaeIII	GTNAC	3 cut(s)	217, 598, 1562
MalI	GATC	6 cut(s)	7, 112, 288, 379, 495, 792
MboI	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
MfeI	CAATTG	1 cut(s)	1026
MflI	RGATCY	1 cut(s)	110
MhlI	GDGCHC	3 cut(s)	244, 1015, 1734
MlyI	GAGTC	1 cut(s)	839
MmeI	TCCRAC	3 cut(s)	138, 319, 379
Mph1103I	ATGCAT	1 cut(s)	1005
MroI	TCCGGA	2 cut(s)	578, 675
MseI	TTAA	4 cut(s)	294, 884, 1455, 1493
MslI	CAYNNNNRTG	4 cut(s)	519, 1161, 1737, 1739
MspCI	CTTAAG	1 cut(s)	293
MspI	CCGG	2 cut(s)	579, 676
MspR9I	CCNGG	4 cut(s)	408, 1091, 1101, 1367
MunI	CAATTG	1 cut(s)	1026
Mva1269I	GAATGC	2 cut(s)	460, 848
MvaI	CCWGG	4 cut(s)	408, 1091, 1101, 1367
MvnI	CGCG	1 cut(s)	1333
MwoI	GCNNNNNNNGC	7 cut(s)	145, 656, 665, 969, 1211, 1641, 1729
NdeII	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
NlaIII	CATG	8 cut(s)	349, 524, 547, 896, 995, 1055, 1489, 1727
NlaIV	GGNNCC	4 cut(s)	242, 330, 403, 1695
NmuCI	GTSAC	1 cut(s)	217
NsbI	TGCGCA	1 cut(s)	962
NsiI	ATGCAT	1 cut(s)	1005
NspI	RCATGY	2 cut(s)	349, 547
NspV	TTCGAA	1 cut(s)	1108
OliI	CACNNNNGTG	1 cut(s)	1161
PasI	CCCWGGG	1 cut(s)	407
PauI	GCGCGC	1 cut(s)	1331
PceI	AGGCCT	1 cut(s)	1089
PctI	GAATGC	2 cut(s)	460, 848
PfeI	GAWTC	3 cut(s)	593, 1348, 1361
PflFI	GACNNNGTC	1 cut(s)	1573
PkrI	GCNGC	8 cut(s)	67, 70, 100, 934, 1081, 1506, 1643, 1753
PleI	GAGTC	1 cut(s)	838
PpsI	GAGTC	1 cut(s)	838
PsiI	TTATAA	1 cut(s)	1464
Psp124BI	GAGCTC	1 cut(s)	1015
Psp1406I	AACGTT	1 cut(s)	122
Psp6I	CCWGG	4 cut(s)	406, 1089, 1099, 1365
PspGI	CCWGG	4 cut(s)	406, 1089, 1099, 1365
PspN4I	GGNNCC	4 cut(s)	242, 330, 403, 1695
PspOMI	GGGCCC	1 cut(s)	240
PspPI	GGNCC	2 cut(s)	240, 241
PstNI	CAGNNNCTG	2 cut(s)	113, 1513
PsuI	RGATCY	1 cut(s)	110
PsyI	GACNNNGTC	1 cut(s)	1573
PteI	GCGCGC	1 cut(s)	1331
RsaI	GTAC	2 cut(s)	573, 922
RsaNI	GTAC	2 cut(s)	572, 921
RseI	CAYNNNNRTG	4 cut(s)	519, 1161, 1737, 1739
SacI	GAGCTC	1 cut(s)	1015
SaqAI	TTAA	4 cut(s)	294, 884, 1455, 1493
SatI	GCNGC	8 cut(s)	66, 69, 99, 933, 1080, 1505, 1642, 1752
Sau3AI	GATC	6 cut(s)	5, 110, 286, 377, 493, 790
Sau96I	GGNCC	2 cut(s)	240, 241
SchI	GAGTC	1 cut(s)	839
ScrFI	CCNGG	4 cut(s)	408, 1091, 1101, 1367
SduI	GDGCHC	3 cut(s)	244, 1015, 1734
SfaNI	GCATC	5 cut(s)	454, 853, 972, 990, 1012
SfcI	CTRYAG	2 cut(s)	333, 738
SfuI	TTCGAA	1 cut(s)	1108
SmiMI	CAYNNNNRTG	4 cut(s)	519, 1161, 1737, 1739
SmlI	CTYRAG	1 cut(s)	293
SmoI	CTYRAG	1 cut(s)	293
SseBI	AGGCCT	1 cut(s)	1089
SsiI	CCGC	4 cut(s)	101, 1354, 1751, 1825
SspMI	CTAG	3 cut(s)	449, 1176, 1631
SstI	GAGCTC	1 cut(s)	1015
StuI	AGGCCT	1 cut(s)	1089
StyD4I	CCNGG	4 cut(s)	406, 1089, 1099, 1365
StyI	CCWWGG	1 cut(s)	967
TaaI	ACNGT	4 cut(s)	1034, 1114, 1430, 1812
TaiI	ACGT	4 cut(s)	125, 722, 1155, 1534
TaqI	TCGA	4 cut(s)	8, 496, 825, 1108
TatI	WGTACW	1 cut(s)	920
TauI	GCSGC	1 cut(s)	1754
TfiI	GAWTC	3 cut(s)	593, 1348, 1361
Tru1I	TTAA	4 cut(s)	294, 884, 1455, 1493
Tru9I	TTAA	4 cut(s)	294, 884, 1455, 1493
TscAI	CASTG	2 cut(s)	1189, 1435
TseFI	GTSAC	1 cut(s)	217
TseI	GCWGC	7 cut(s)	65, 68, 98, 932, 1079, 1504, 1641
Tsp45I	GTSAC	1 cut(s)	217
TspDTI	ATGAA	7 cut(s)	453, 537, 881, 980, 1407, 1455, 1502
TspGWI	ACGGA	1 cut(s)	368
TspRI	CASTG	2 cut(s)	1189, 1435
Tth111I	GACNNNGTC	1 cut(s)	1573
Vha464I	CTTAAG	1 cut(s)	293
VneI	GTGCAC	1 cut(s)	1730
XapI	RAATTY	3 cut(s)	733, 1232, 1489
XceI	RCATGY	2 cut(s)	349, 547
XcmI	CCANNNNNNNNNTGG	1 cut(s)	414
XspI	CTAG	3 cut(s)	449, 1176, 1631
Zsp2I	ATGCAT	1 cut(s)	1005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.