Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004508

Physical Location & Seq

Genomic Coordinates Forward (+)

3615942 .. 3623233

Gene Structure 7292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g04670.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGCCCATCGACATCGCAACCTTAGAAGAGAGGTACATTAATTCCTGCAAGAAGCACTGCGTTTCACCTAATGCTGCAATTCTCTCTGTTCTCTTTAAGGCTGAGGTTAAAAGGTCTTGCAATGAGCTCTGTAGCCTGGAGATTTCATTGGACCATCTTAAGGATGTGGAATTCCCACCACTTCTTGATTTATGTATGGAACTTGATGCTTCCGAGGTTGAAGCAGTTGACATACACAATGAATCATTGCATGTTTTGAATTGGAAATATGCTCTGTTGTTGATGCGTGCTATCAATCAAAAGCTTCGAGTTGTTGATCTCCAAGATTTGGCATTTGGGAAGGATTTCTTGAGGGATCTTTCACAGAGAGGTTTGACATGCCAAGTTTTAAACTTGAGATCTTCACATTTCCGGAAGCTAAATATGATGGGAGAGTTCATGCGGCTACAAACACTCAACCTTGACTTTAGCACTTCACTCACTAGTTTACAGGAGGATTGCTTTGCTTGCATGCCCAGTCTAATGTGCCTCTCTCTGTGTGAGACAAGAATTTTAAATCTCTGGACAACGGTTGCTGCGTTTTCTAAACTCCCTTCTTTGGTTAACCTTCGGTTTCAGCATTGGTCATGCTGCAATGATGTTGGGCCTTATTCTGCATCTTCTAGTGGGAAGTTCCATCACAAAACTTTTTCAAATCAGCGAAATAATGGTAGAGCATCATCTGTTAATATTGGGGAACTAACAGACCTGTATTCAAGCACAGAAGAGGTGCTCAGGAATATGTTTTTGCTTAATAATGTGGTTATCAATGATGATGAAAGTGGGCTTGAGGATTCAGATGATAGTGATCTAGACTTTACAAGTCCCCTGCGAGAACATGGTTATATGGAGCGTTTGTCAAATGATTTTTCCGGGGGGAATGGACAGATCAATCAACAGAATGAGGATTCTCTTGATAACTTTCAGAATCGAAATGAGGCGGAGCCCTTAGCTGGTCCCTTTACAAAGTATATTGGAGACAATCAAGTCAAATATATTTCTTATCATGCTTCACCAATATGTTTCGAGAAATACTATAGAGAGTACATGGTAGCCTCGTTACCTCGTTTGAGAATTTTAGATAACTTGCCGATTAGAAAGATTGATCAGGAAACTGCCAGATTGACATTTTCAGAATACTTTGAGCATGTACCATATCAACGGAAGCATAGAGAAAATGTCGTTAGTGTGTTACAAAAGCGTGAAATAAGATCAAGTCAAAATCCTGTACAAAGTCCTGGGAAAAAAGTATCGAGTCTCTATGGAAAGTCTCAATGCTTCTATACCAGGTCTCTTTCTGCTGCCAAAATGGGATCTTGTGCTTGGCCATGCTTGCACCCGCTTGCTGTTTCTGGCCATGACTTGGGAGGTGAAAGTAGGAGCTTTCGTCCTAGGCAGTTTGAGTATCATCCATCCAACTCTAGCCTTATGGTCTTTGGAACATTAGATGGTGAAATAGTTGCAGTCAACCATGAGAATGGGAAAATTGTCAGTTATATCCCATCACTTGGAGCAATGAATAGTGTGCTGGGACTCTGTTGGCTAAAGAAGTATCCCTCTAAGCTAATAGCTGGTTCAGATAATGGCTCATTGAAATTGTACGACATCCATCATATGCGAACAGAAACAGGGATATGTAGTGGTGCTGGGTCCATCCCCTTTGATGAGTTTGACCAGTTGACATCTGTTCATGCTAATTCCACGGATGAGTTATTTCTTGCTAGTGGATACTCGAGAGACGTTGCCTTATATGACATTTCTAGTGGAAAAAGGTTACAAGTGTTTACTGATATGCATCAAGAGCATATAAATGTAATAAAGTTTGCAAACCATTCCCCATCTGTTTTTGCGACTTCTTCATGGGATCGGGATGTCAAGATGTGGGACCTAAGACAGAAACCAATAAGCCCTTGCTTTACCTCTTCAAGCTCTAGGGGTAATGTGATGGTTTGCTTTTCTCCTGATGATCACTATCTTCTTGTCTCAGCTGTTGACAATGAGGTTAGGCAACTTCTCGCAGTTGATGGGAGGCTTCACTTGAATTTTGAAATAGCTTCTACAGGAAGTAGTACGAATTACACTCGATCCTATTACATGAACGGAAGAGATTATATTATTAGTGGGAGTTGTGATGAACATGTTGTCCGCATATGCTGTGCTCAAACAGGGAGACGCCTTAGGGATATATCTTTGGAGGGAGGAGGAAGATCCAGGAATTCTATCTTTGTGCAATCTTTGAGGGGTGATCCATTCAGAGAATTCAACTTGAGTATCTTGGCAGCCCATATGCGGCCAAGATCGAAGTCTGAAATTATCAAGGTGAATCTGCTAGCATCTAGTGATTATGCCAAGGAACACTTTGATGGTCAGCAGGCCTGCCCAACTAATAGTATGGGAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0000715 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006293 GO:0006294 GO:0006296 GO:0006325 GO:0006464 GO:0006508 GO:0006513 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010390 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0016579 GO:0019538 GO:0022607 GO:0030054 GO:0031334 GO:0031461 GO:0031465 GO:0031974 GO:0031981 GO:0032446 GO:0032991 GO:0033522 GO:0033554 GO:0033683 GO:0034622 GO:0034641 GO:0034644 GO:0035518 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043687 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051276 GO:0051716 GO:0051865 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070646 GO:0070647 GO:0070911 GO:0070914 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071824 GO:0071840 GO:0080008 GO:0090304 GO:0090305 GO:0097159 GO:0104004 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

814

Amino Acids

91.63

Weight (kDa)

6.21

Isoelectric Point (pI)

48.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHU1_N	PF20919	4 - 391	1.1e-83	DWD hypersensitive to UV-B 1, N-terminal
WD40_Prp19	PF24814	480 - 682	5e-12	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	492 - 728	1.3e-17	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	493 - 684	2e-12	WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st	PF25173	521 - 682	7.9e-10	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	533 - 727	4.6e-06	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	571 - 682	1.7e-06	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	574 - 690	1e-11	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34280
fragaria_vesca	FvH4_2g04670 FvH4_2g04670
malus_domestica	MD05G1093800.v1.1
prunus_persica	Prupe.8G138700_v2.0.a1 Prupe.8G138700_v2.0.a1
pyrus_communis	pycom05g09290
rosa_chinensis	RchiOBHm_Chr6g0254291 RchiOBHm_Chr6g0254331 RchiOBHm_Chr6g0254371
rosa_laevigata	RLG00000014132 RLG00000014922 RLG00000014929
rosa_multiflora	Rmu_sc0012713.1_g000001 Rmu_sc0012713.1_g000002 Rmu_sc0027609.1_g000001 Rmu_ssc0000412.1_g000017
rosa_roxburghii	Rroxscaffold_7G00210950
rosa_rugosa	Rorug05G0551700 Rorug05G0551800 Rorug05G0551800
rosa_samantha	Rh6AG068100 Rh6AG068600 Rh6BG061000 Rh6BG061300 Rh6CG060800 Rh6CG061200 Rh6DG057900 Rh6DG058100 Rh6DG058500
rosa_wichuraiana	Rw6G005970 Rw6G006010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1025
AccB7I	CCANNNNNTGG	3 cut(s)	328, 1402, 1547
AccIII	TCCGGA	1 cut(s)	411
AciI	CCGC	5 cut(s)	442, 980, 1379, 2185, 2329
AclWI	GGATC	6 cut(s)	363, 1360, 1911, 2118, 2241, 2279
AcoI	YGGCCR	3 cut(s)	1364, 1393, 2330
AcsI	RAATTY	6 cut(s)	170, 549, 1113, 2080, 2254, 2297
AcyI	GRCGYC	1 cut(s)	2212
AfaI	GTAC	6 cut(s)	35, 1085, 1191, 1269, 1640, 2110
AfiI	CCNNNNNNNGG	7 cut(s)	160, 328, 598, 992, 1402, 1547, 2328
AflII	CTTAAG	1 cut(s)	158
AflIII	ACRYGT	1 cut(s)	2176
AgsI	TTSAA	9 cut(s)	221, 259, 693, 756, 1633, 1965, 2080, 2087, 2302
AhlI	ACTAGT	1 cut(s)	482
AjnI	CCWGG	4 cut(s)	135, 1276, 1325, 2249
AloI	GAACNNNNNNTCC	2 cut(s)	2166, 2198
Alw21I	GWGCWC	3 cut(s)	129, 774, 2200
Alw26I	GTCTC	8 cut(s)	536, 1011, 1301, 1314, 1335, 1770, 2026, 2203
AlwI	GGATC	6 cut(s)	363, 1360, 1911, 2118, 2241, 2279
Ama87I	CYCGRG	1 cut(s)	1771
Aor13HI	TCCGGA	1 cut(s)	411
AoxI	GGCC	5 cut(s)	644, 1364, 1393, 2330, 2412
ApeKI	GCWGC	5 cut(s)	74, 575, 630, 1340, 2318
ApoI	RAATTY	6 cut(s)	170, 549, 1113, 2080, 2254, 2297
AseI	ATTAAT	1 cut(s)	39
Asp700I	GAANNNNTTC	1 cut(s)	344
AspA2I	CCTAGG	1 cut(s)	1430
AspS9I	GGNCC	5 cut(s)	151, 644, 995, 1689, 1924
AsuC2I	CCSGG	1 cut(s)	913
AsuHPI	GGTGA	6 cut(s)	57, 1044, 1421, 1502, 2294, 2371
AsuNHI	GCTAGC	1 cut(s)	2368
AvaI	CYCGRG	1 cut(s)	1771
AvaII	GGWCC	4 cut(s)	151, 995, 1689, 1924
AvrII	CCTAGG	1 cut(s)	1430
AxyI	CCTNAGG	1 cut(s)	2216
BaeI	ACNNNNGTAYC	2 cut(s)	2293, 2326
BalI	TGGCCA	2 cut(s)	1366, 1395
BanII	GRGCYC	2 cut(s)	129, 987
Bbv12I	GWGCWC	3 cut(s)	129, 774, 2200
BbvCI	CCTCAGC	1 cut(s)	102
BbvI	GCAGC	5 cut(s)	61, 562, 617, 1327, 2330
BciT130I	CCWGG	4 cut(s)	137, 1278, 1327, 2251
BciVI	GTATCC	2 cut(s)	1602, 1760
BclI	TGATCA	2 cut(s)	1144, 2005
BcnI	CCSGG	1 cut(s)	913
BcoDI	GTCTC	8 cut(s)	536, 1011, 1301, 1314, 1335, 1770, 2026, 2203
BcuI	ACTAGT	1 cut(s)	482
BfmI	CTRYAG	3 cut(s)	130, 1075, 2097
BfrI	CTTAAG	1 cut(s)	158
BfuI	GTATCC	2 cut(s)	1602, 1760
BglII	AGATCT	1 cut(s)	398
BisI	GCNGC	7 cut(s)	75, 443, 576, 631, 1341, 2319, 2330
BlnI	CCTAGG	1 cut(s)	1430
BlsI	GCNGC	7 cut(s)	76, 444, 577, 632, 1342, 2320, 2331
Bme1390I	CCNGG	5 cut(s)	137, 913, 1278, 1327, 2251
Bme18I	GGWCC	4 cut(s)	151, 995, 1689, 1924
BmeT110I	CYCGRG	1 cut(s)	1771
BmgT120I	GGNCC	5 cut(s)	151, 644, 995, 1689, 1924
BmiI	GGNNCC	4 cut(s)	984, 997, 1690, 1925
BmrFI	CCNGG	5 cut(s)	137, 913, 1278, 1327, 2251
BmrI	ACTGGG	1 cut(s)	510
BmsI	GCATC	6 cut(s)	196, 273, 665, 725, 1843, 2381
BmtI	GCTAGC	1 cut(s)	2372
BmuI	ACTGGG	1 cut(s)	510
BpmI	CTGGAG	1 cut(s)	158
Bpu10I	CCTNAGC	3 cut(s)	102, 773, 988
BpuEI	CTTGAG	4 cut(s)	370, 415, 848, 2326
BpuMI	CCSGG	1 cut(s)	913
BsaBI	GATNNNNATC	3 cut(s)	846, 1833, 2010
BsaHI	GRCGYC	1 cut(s)	2212
BsaI	GGTCTC	1 cut(s)	1335
BsaJI	CCNNGG	6 cut(s)	213, 912, 1277, 1430, 1740, 2388
BsaWI	WCCGGW	1 cut(s)	411
BsaXI	ACNNNNNCTCC	4 cut(s)	881, 911, 1411, 1441
Bsc4I	CCNNNNNNNGG	7 cut(s)	160, 328, 598, 992, 1402, 1547, 2328
Bse1I	ACTGG	2 cut(s)	516, 1714
Bse21I	CCTNAGG	1 cut(s)	2216
Bse3DI	GCAATG	4 cut(s)	127, 245, 640, 1560
Bse8I	GATNNNNATC	3 cut(s)	846, 1833, 2010
BseAI	TCCGGA	1 cut(s)	411
BseBI	CCWGG	4 cut(s)	137, 1278, 1327, 2251
BseDI	CCNNGG	6 cut(s)	213, 912, 1277, 1430, 1740, 2388
BseGI	GGATG	7 cut(s)	169, 1447, 1451, 1644, 1692, 1750, 1915
BseJI	GATNNNNATC	3 cut(s)	846, 1833, 2010
BseLI	CCNNNNNNNGG	7 cut(s)	160, 328, 598, 992, 1402, 1547, 2328
BseMI	GCAATG	4 cut(s)	127, 245, 640, 1560
BseMII	CTCAG	3 cut(s)	93, 787, 2037
BseNI	ACTGG	2 cut(s)	516, 1714
BseRI	GAGGAG	1 cut(s)	2253
BseXI	GCAGC	5 cut(s)	61, 562, 617, 1327, 2330
BseYI	CCCAGC	2 cut(s)	1567, 1685
BshFI	GGCC	5 cut(s)	646, 1366, 1395, 2332, 2414
BsiHKAI	GWGCWC	3 cut(s)	129, 774, 2200
BsiHKCI	CYCGRG	1 cut(s)	1771
BsiSI	CCGG	2 cut(s)	412, 912
BslFI	GGGAC	4 cut(s)	849, 981, 1584, 1937
BslI	CCNNNNNNNGG	7 cut(s)	160, 328, 598, 992, 1402, 1547, 2328
BsmAI	GTCTC	8 cut(s)	536, 1011, 1301, 1314, 1335, 1770, 2026, 2203
BsmBI	CGTCTC	2 cut(s)	1770, 2203
BsmFI	GGGAC	4 cut(s)	849, 981, 1584, 1937
BsnI	GGCC	5 cut(s)	646, 1366, 1395, 2332, 2414
Bso31I	GGTCTC	1 cut(s)	1335
BsoBI	CYCGRG	1 cut(s)	1771
Bsp1286I	GDGCHC	4 cut(s)	129, 774, 987, 2200
Bsp13I	TCCGGA	1 cut(s)	411
Bsp1407I	TGTACA	1 cut(s)	1267
BspACI	CCGC	5 cut(s)	442, 980, 1379, 2185, 2329
BspANI	GGCC	5 cut(s)	646, 1366, 1395, 2332, 2414
BspCNI	CTCAG	3 cut(s)	94, 786, 2036
BspEI	TCCGGA	1 cut(s)	411
BspLI	GGNNCC	4 cut(s)	984, 997, 1690, 1925
BspOI	GCTAGC	1 cut(s)	2372
BspPI	GGATC	6 cut(s)	363, 1360, 1911, 2118, 2241, 2279
BspTI	CTTAAG	1 cut(s)	158
BspTNI	GGTCTC	1 cut(s)	1335
BsrDI	GCAATG	4 cut(s)	127, 245, 640, 1560
BsrGI	TGTACA	1 cut(s)	1267
BsrI	ACTGG	2 cut(s)	516, 1714
BssECI	CCNNGG	6 cut(s)	213, 912, 1277, 1430, 1740, 2388
BssNI	GRCGYC	1 cut(s)	2212
BssT1I	CCWWGG	2 cut(s)	1430, 2388
Bst2UI	CCWGG	4 cut(s)	137, 1278, 1327, 2251
Bst4CI	ACNGT	1 cut(s)	571
Bst6I	CTCTTC	4 cut(s)	21, 759, 1966, 2137
BstACI	GRCGYC	1 cut(s)	2212
BstAFI	CTTAAG	1 cut(s)	158
BstAUI	TGTACA	1 cut(s)	1267
BstC8I	GCNNGC	8 cut(s)	288, 508, 512, 1373, 1383, 2370, 2412, 2416
BstDEI	CTNAG	8 cut(s)	22, 102, 773, 988, 1599, 1928, 2023, 2216
BstDSI	CCRYGG	1 cut(s)	1740
BstF5I	GGATG	7 cut(s)	169, 1447, 1451, 1644, 1692, 1750, 1915
BstMAI	GTCTC	8 cut(s)	536, 1011, 1301, 1314, 1335, 1770, 2026, 2203
BstMWI	GCNNNNNNNGC	3 cut(s)	507, 1372, 1840
BstNI	CCWGG	4 cut(s)	137, 1278, 1327, 2251
BstNSI	RCATGY	5 cut(s)	254, 381, 514, 1190, 2180
BstSCI	CCNGG	5 cut(s)	135, 911, 1276, 1325, 2249
BstSFI	CTRYAG	3 cut(s)	130, 1075, 2097
BstV1I	GCAGC	5 cut(s)	61, 562, 617, 1327, 2330
BstX2I	RGATCY	4 cut(s)	355, 398, 1352, 2246
BstXI	CCANNNNNNTGG	1 cut(s)	1517
BstYI	RGATCY	4 cut(s)	355, 398, 1352, 2246
Bsu36I	CCTNAGG	1 cut(s)	2216
BsuI	GTATCC	2 cut(s)	1602, 1760
BsuRI	GGCC	5 cut(s)	646, 1366, 1395, 2332, 2414
BtgI	CCRYGG	1 cut(s)	1740
BtsCI	GGATG	7 cut(s)	169, 1447, 1451, 1644, 1692, 1750, 1915
BtsI	GCAGTG	1 cut(s)	55
BtsIMutI	CAGTG	1 cut(s)	55
Cac8I	GCNNGC	8 cut(s)	288, 508, 512, 1373, 1383, 2370, 2412, 2416
Cfr13I	GGNCC	5 cut(s)	151, 644, 995, 1689, 1924
CseI	GACGC	1 cut(s)	2220
CsiI	ACCWGGT	1 cut(s)	1325
Csp6I	GTAC	6 cut(s)	34, 1084, 1190, 1268, 1639, 2109
CviQI	GTAC	6 cut(s)	34, 1084, 1190, 1268, 1639, 2109
DdeI	CTNAG	8 cut(s)	22, 102, 773, 988, 1599, 1928, 2023, 2216
DraI	TTTAAA	2 cut(s)	390, 555
DrdI	GACNNNNNNGTC	1 cut(s)	1025
DseDI	GACNNNNNNGTC	1 cut(s)	1025
EaeI	YGGCCR	3 cut(s)	1364, 1393, 2330
Eam1104I	CTCTTC	4 cut(s)	21, 759, 1966, 2137
EarI	CTCTTC	4 cut(s)	21, 759, 1966, 2137
EciI	GGCGGA	1 cut(s)	995
Ecl136II	GAGCTC	1 cut(s)	127
Eco130I	CCWWGG	2 cut(s)	1430, 2388
Eco147I	AGGCCT	1 cut(s)	2414
Eco24I	GRGCYC	2 cut(s)	129, 987
Eco31I	GGTCTC	1 cut(s)	1335
Eco47I	GGWCC	4 cut(s)	151, 995, 1689, 1924
Eco53kI	GAGCTC	1 cut(s)	127
Eco81I	CCTNAGG	1 cut(s)	2216
Eco88I	CYCGRG	1 cut(s)	1771
EcoICRI	GAGCTC	1 cut(s)	127
EcoO109I	RGGNCCY	1 cut(s)	1924
EcoRI	GAATTC	3 cut(s)	170, 2254, 2297
EcoRII	CCWGG	4 cut(s)	135, 1276, 1325, 2249
EcoT14I	CCWWGG	2 cut(s)	1430, 2388
EcoT22I	ATGCAT	1 cut(s)	1836
EcoT38I	GRGCYC	2 cut(s)	129, 987
ErhI	CCWWGG	2 cut(s)	1430, 2388
Esp3I	CGTCTC	2 cut(s)	1770, 2203
FalI	AAGNNNNNCTT	4 cut(s)	332, 364, 2381, 2413
FaqI	GGGAC	4 cut(s)	849, 981, 1584, 1937
FauI	CCCGC	1 cut(s)	1386
FauNDI	CATATG	3 cut(s)	1653, 2189, 2325
FbaI	TGATCA	2 cut(s)	1144, 2005
Fnu4HI	GCNGC	7 cut(s)	75, 443, 576, 631, 1341, 2319, 2330
FokI	GGATG	7 cut(s)	176, 1434, 1438, 1631, 1679, 1757, 1922
FriOI	GRGCYC	2 cut(s)	129, 987
Fsp4HI	GCNGC	7 cut(s)	75, 443, 576, 631, 1341, 2319, 2330
GluI	GCNGC	7 cut(s)	75, 443, 576, 631, 1341, 2319, 2330
GsaI	CCCAGC	2 cut(s)	1571, 1689
GsuI	CTGGAG	1 cut(s)	158
HaeIII	GGCC	5 cut(s)	646, 1366, 1395, 2332, 2414
HapII	CCGG	2 cut(s)	412, 912
HgaI	GACGC	1 cut(s)	2220
Hin1I	GRCGYC	1 cut(s)	2212
HincII	GTYRAC	5 cut(s)	229, 604, 1507, 1719, 2032
HindII	GTYRAC	5 cut(s)	229, 604, 1507, 1719, 2032
HindIII	AAGCTT	1 cut(s)	302
HinfI	GANTC	7 cut(s)	242, 833, 947, 967, 1294, 1572, 2362
HpaI	GTTAAC	1 cut(s)	604
HpaII	CCGG	2 cut(s)	412, 912
HphI	GGTGA	6 cut(s)	57, 1044, 1421, 1502, 2294, 2371
Hpy166II	GTNNAC	7 cut(s)	229, 488, 604, 1507, 1719, 1824, 2032
Hpy188I	TCNGA	7 cut(s)	214, 838, 966, 1174, 1618, 2294, 2347
Hpy8I	GTNNAC	7 cut(s)	229, 488, 604, 1507, 1719, 1824, 2032
HpyAV	CCTTC	3 cut(s)	334, 603, 617
HpyCH4III	ACNGT	1 cut(s)	571
HpyCH4IV	ACGT	1 cut(s)	1779
HpyF10VI	GCNNNNNNNGC	3 cut(s)	507, 1372, 1840
HpyF3I	CTNAG	8 cut(s)	22, 102, 773, 988, 1599, 1928, 2023, 2216
HpySE526I	ACGT	1 cut(s)	1779
Hsp92I	GRCGYC	1 cut(s)	2212
Kpn2I	TCCGGA	1 cut(s)	411
Ksp22I	TGATCA	2 cut(s)	1144, 2005
KspAI	GTTAAC	1 cut(s)	604
LmnI	GCTCC	4 cut(s)	889, 982, 1419, 1550
Lsp1109I	GCAGC	5 cut(s)	61, 562, 617, 1327, 2330
LweI	GCATC	6 cut(s)	196, 273, 665, 725, 1843, 2381
MabI	ACCWGGT	1 cut(s)	1325
MaeII	ACGT	1 cut(s)	1779
MaeIII	GTNAC	3 cut(s)	1098, 1230, 1812
MboII	GAAGA	9 cut(s)	38, 393, 651, 776, 1887, 1953, 2006, 2154, 2256
MflI	RGATCY	4 cut(s)	355, 398, 1352, 2246
MhlI	GDGCHC	4 cut(s)	129, 774, 987, 2200
MlsI	TGGCCA	2 cut(s)	1366, 1395
MluNI	TGGCCA	2 cut(s)	1366, 1395
MlyI	GAGTC	2 cut(s)	1303, 1566
MmeI	TCCRAC	1 cut(s)	1479
Mox20I	TGGCCA	2 cut(s)	1366, 1395
Mph1103I	ATGCAT	1 cut(s)	1836
MroI	TCCGGA	1 cut(s)	411
MroXI	GAANNNNTTC	1 cut(s)	344
MscI	TGGCCA	2 cut(s)	1366, 1395
MseI	TTAA	9 cut(s)	39, 96, 108, 159, 389, 554, 603, 726, 792
MslI	CAYNNNNRTG	4 cut(s)	1057, 1515, 1848, 2400
Msp20I	TGGCCA	2 cut(s)	1366, 1395
MspA1I	CMGCKG	1 cut(s)	2027
MspCI	CTTAAG	1 cut(s)	158
MspI	CCGG	2 cut(s)	412, 912
MspR9I	CCNGG	5 cut(s)	137, 913, 1278, 1327, 2251
MvaI	CCWGG	4 cut(s)	137, 1278, 1327, 2251
MwoI	GCNNNNNNNGC	3 cut(s)	507, 1372, 1840
NciI	CCSGG	1 cut(s)	913
NdeI	CATATG	3 cut(s)	1653, 2189, 2325
NheI	GCTAGC	1 cut(s)	2368
NlaIV	GGNNCC	4 cut(s)	984, 997, 1690, 1925
NsiI	ATGCAT	1 cut(s)	1836
NspI	RCATGY	5 cut(s)	254, 381, 514, 1190, 2180
PaeI	GCATGC	1 cut(s)	514
PaeR7I	CTCGAG	1 cut(s)	1771
PceI	AGGCCT	1 cut(s)	2414
PciI	ACATGT	1 cut(s)	2176
PcsI	WCGNNNNNNNCGW	1 cut(s)	575
PdmI	GAANNNNTTC	1 cut(s)	344
PfeI	GAWTC	5 cut(s)	242, 833, 947, 967, 2362
PflMI	CCANNNNNTGG	3 cut(s)	328, 1402, 1547
PfoI	TCCNGGA	1 cut(s)	2249
PkrI	GCNGC	7 cut(s)	76, 444, 577, 632, 1342, 2320, 2331
PleI	GAGTC	2 cut(s)	1302, 1566
PpsI	GAGTC	2 cut(s)	1302, 1566
PpuMI	RGGWCCY	1 cut(s)	1924
PscI	ACATGT	1 cut(s)	2176
PshBI	ATTAAT	1 cut(s)	39
Psp124BI	GAGCTC	1 cut(s)	129
Psp5II	RGGWCCY	1 cut(s)	1924
Psp6I	CCWGG	4 cut(s)	135, 1276, 1325, 2249
PspFI	CCCAGC	2 cut(s)	1567, 1685
PspGI	CCWGG	4 cut(s)	135, 1276, 1325, 2249
PspN4I	GGNNCC	4 cut(s)	984, 997, 1690, 1925
PspPI	GGNCC	5 cut(s)	151, 644, 995, 1689, 1924
PspPPI	RGGWCCY	1 cut(s)	1924
PsuI	RGATCY	4 cut(s)	355, 398, 1352, 2246
PvuII	CAGCTG	1 cut(s)	2027
RsaI	GTAC	6 cut(s)	35, 1085, 1191, 1269, 1640, 2110
RsaNI	GTAC	6 cut(s)	34, 1084, 1190, 1268, 1639, 2109
RseI	CAYNNNNRTG	4 cut(s)	1057, 1515, 1848, 2400
SacI	GAGCTC	1 cut(s)	129
SaqAI	TTAA	9 cut(s)	39, 96, 108, 159, 389, 554, 603, 726, 792
SatI	GCNGC	7 cut(s)	75, 443, 576, 631, 1341, 2319, 2330
Sau96I	GGNCC	5 cut(s)	151, 644, 995, 1689, 1924
SchI	GAGTC	2 cut(s)	1303, 1566
ScrFI	CCNGG	5 cut(s)	137, 913, 1278, 1327, 2251
SduI	GDGCHC	4 cut(s)	129, 774, 987, 2200
SexAI	ACCWGGT	1 cut(s)	1325
SfaNI	GCATC	6 cut(s)	196, 273, 665, 725, 1843, 2381
SfcI	CTRYAG	3 cut(s)	130, 1075, 2097
Sfr274I	CTCGAG	1 cut(s)	1771
SinI	GGWCC	4 cut(s)	151, 995, 1689, 1924
SlaI	CTCGAG	1 cut(s)	1771
SmiMI	CAYNNNNRTG	4 cut(s)	1057, 1515, 1848, 2400
SmlI	CTYRAG	6 cut(s)	158, 349, 394, 827, 1771, 2305
SmoI	CTYRAG	6 cut(s)	158, 349, 394, 827, 1771, 2305
SpeI	ACTAGT	1 cut(s)	482
SphI	GCATGC	1 cut(s)	514
SseBI	AGGCCT	1 cut(s)	2414
SsiI	CCGC	5 cut(s)	442, 980, 1379, 2185, 2329
SspI	AATATT	1 cut(s)	730
SstI	GAGCTC	1 cut(s)	129
StuI	AGGCCT	1 cut(s)	2414
StyD4I	CCNGG	5 cut(s)	135, 911, 1276, 1325, 2249
StyI	CCWWGG	2 cut(s)	1430, 2388
TaaI	ACNGT	1 cut(s)	571
TaiI	ACGT	1 cut(s)	1782
TaqI	TCGA	8 cut(s)	9, 307, 970, 1065, 1292, 1772, 2122, 2339
TatI	WGTACW	2 cut(s)	1083, 1267
TauI	GCSGC	2 cut(s)	445, 2332
TfiI	GAWTC	5 cut(s)	242, 833, 947, 967, 2362
Tru1I	TTAA	9 cut(s)	39, 96, 108, 159, 389, 554, 603, 726, 792
Tru9I	TTAA	9 cut(s)	39, 96, 108, 159, 389, 554, 603, 726, 792
TscAI	CASTG	1 cut(s)	62
TseI	GCWGC	5 cut(s)	74, 575, 630, 1340, 2318
TspDTI	ATGAA	9 cut(s)	135, 255, 427, 831, 1571, 1718, 1887, 2150, 2187
TspGWI	ACGGA	3 cut(s)	1216, 1757, 2154
TspRI	CASTG	1 cut(s)	62
Van91I	CCANNNNNTGG	3 cut(s)	328, 1402, 1547
Vha464I	CTTAAG	1 cut(s)	158
VpaK11BI	GGWCC	4 cut(s)	151, 995, 1689, 1924
VspI	ATTAAT	1 cut(s)	39
XapI	RAATTY	6 cut(s)	170, 549, 1113, 2080, 2254, 2297
XbaI	TCTAGA	1 cut(s)	850
XceI	RCATGY	5 cut(s)	254, 381, 514, 1190, 2180
XhoI	CTCGAG	1 cut(s)	1771
XmaJI	CCTAGG	1 cut(s)	1430
XmnI	GAANNNNTTC	1 cut(s)	344
Zsp2I	ATGCAT	1 cut(s)	1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.