Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004508

Physical Location & Seq

Genomic Coordinates Forward (+)

9407034 .. 9411173

Gene Structure 4140 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ22817

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGTTTTTGCTTAATAATGTGGTTATAAATGATGATGAAAGTAGGGCTAAGGATTCAGATGATAGCGAAATAGACTTTTCAAGTCCCCTGCAAGAACATGGTTCTGTGGAGCGTTTGTCAAATGTTTTTTCAGGAGGGAACAGACTGAGAGAGTACATGACAGCCTCATTACCTCGTTTGAGAATTTTAGATAACTTGCCAATTAGAAAGATTGATCAGGAAACTGCTAGGATGACATTTTCAGAATATTTTGAGCATGTACCATATCAAAGAAAGCATAAGGAAAATGTCATTAGTGTGTTACAAAAGCGTGAAATAAGATCAAGTCAAAATCATGTACAAAGTCCTGCGAAGAAAGTATCGAATCTCTATGGAAAGTCTCAATGCTTCTATACCAGGTCTCTTTCTGCTGCCAAAATGGGATCTTGTGATAGGCCATTCTTGAACCCGCTTTCTTTTTCAGGCATTACTCTGGTAGGTGAAAGTAAGAGCTTTCGTCCTAGGCAGTTTGAGTATCATCCATCCAACTCCAGCCTTATGGTCTTTGGAACATTAGATGGTGAAATAGTTGCAGTCAACCATGAGAATGGGAAAATTGTCAGTTATATCCCATCACTAGGAGCAATGAATAGTGTGCTGGGACTCTGTTTGCTCAAGAAGTATCCCTCTAAGCTAATAGCTGGTTCAGATAATGGCTCATTGAAATTGTACGACATCCATCATATGCGATCAGTGGAAACATGCATATGTGGTGGTGCCGGGTCTGTCTCCTTTGACGAGTTTGACCAGTTGACATCTGTTCATGTTAATTCCACGGACGAGCTATTTCTTGCTAGTGGATACTCGAGAGACGTTGCCTTATATGACATTAGTAGTGGAAAGTGCTTACAGGTGTTGACTAATATGCATCGGGAGCATATTAATGTAATGAAGTTTGCAAAACCATCTGTTTTCGCCGCTTCTTCATTTGATCAGGATGTCAAGATGTGGGACCTAAGACAGAAACCAATAAGTCCTTGCTATTCCTCTTCAAGCTCTAGGGGTAATGTGATGGTTTGCTTTTCTCCTGATGATCACTATCTTCTTGTCTCAGCTGTTGATAACGAGGTTAGGCAACTTCTCGCAGTTGATGGGAGACTTCACTTGAATTTTGAGATAGCCTCTACAGGAAGTTCTCAGAACTACACTCGATCCTATTACATGAATGGAAGAGATTATATCATCAGTGGGAGCTGTGATGAACATGTTGTCCGCATATGCTGTGCCCAAACAGGGAGACGCCTGAGGGATATATCTTTGGAGGCTTATTATGCTACTAGAGTAGGATTACTGTCTGATGTTAAAATATCTACTGTTGTTGGGTCACTTTGTATCTGGGTGAAGGACGAGGAAGATCTAGGAGTTCTATGTTTGTGCAATCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0000715 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006293 GO:0006294 GO:0006296 GO:0006325 GO:0006464 GO:0006508 GO:0006513 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010390 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0016579 GO:0019538 GO:0022607 GO:0030054 GO:0031334 GO:0031461 GO:0031465 GO:0031974 GO:0031981 GO:0032446 GO:0032991 GO:0033522 GO:0033554 GO:0033683 GO:0034622 GO:0034641 GO:0034644 GO:0035518 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043687 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051276 GO:0051716 GO:0051865 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070646 GO:0070647 GO:0070911 GO:0070914 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071824 GO:0071840 GO:0080008 GO:0090304 GO:0090305 GO:0097159 GO:0104004 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

474

Amino Acids

53.05

Weight (kDa)

6.54

Isoelectric Point (pI)

46.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	170 - 371	2.9e-11	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	176 - 336	1.9e-06	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	183 - 373	1.1e-10	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	261 - 371	2.3e-07	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	264 - 371	1.2e-08	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	264 - 417	9.9e-06	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	265 - 417	8.6e-16	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	265 - 371	2.8e-08	WDR3 first beta-propeller domain
WDR55	PF24796	277 - 411	1.7e-06	WDR55

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34280
fragaria_vesca	FvH4_2g04670 FvH4_2g04670
malus_domestica	MD05G1093800.v1.1
prunus_persica	Prupe.8G138700_v2.0.a1 Prupe.8G138700_v2.0.a1
pyrus_communis	pycom05g09290
rosa_chinensis	RchiOBHm_Chr6g0254291 RchiOBHm_Chr6g0254331 RchiOBHm_Chr6g0254371
rosa_laevigata	RLG00000014132 RLG00000014922 RLG00000014929
rosa_multiflora	Rmu_sc0012713.1_g000001 Rmu_sc0012713.1_g000002 Rmu_sc0027609.1_g000001 Rmu_ssc0000412.1_g000017
rosa_roxburghii	Rroxscaffold_7G00210950
rosa_rugosa	Rorug05G0551700 Rorug05G0551800 Rorug05G0551800
rosa_samantha	Rh6AG068100 Rh6AG068600 Rh6BG061000 Rh6BG061300 Rh6CG060800 Rh6CG061200 Rh6DG057900 Rh6DG058100 Rh6DG058500
rosa_wichuraiana	Rw6G005970 Rw6G006010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	26
AccB1I	GGYRCC	1 cut(s)	755
AciI	CCGC	3 cut(s)	449, 957, 1252
AclWI	GGATC	2 cut(s)	430, 1185
AcsI	RAATTY	2 cut(s)	183, 1147
AcyI	GRCGYC	1 cut(s)	1279
AfaI	GTAC	4 cut(s)	155, 261, 339, 710
AfiI	CCNNNNNNNGG	2 cut(s)	617, 1272
AflIII	ACRYGT	1 cut(s)	1243
AgsI	TTSAA	5 cut(s)	81, 445, 703, 1032, 1147
AjnI	CCWGG	1 cut(s)	395
AloI	GAACNNNNNNTCC	2 cut(s)	1233, 1265
AluBI	AGCT	7 cut(s)	492, 673, 680, 823, 1035, 1094, 1233
AluI	AGCT	7 cut(s)	492, 673, 680, 823, 1035, 1094, 1233
Alw26I	GTCTC	7 cut(s)	384, 405, 772, 843, 1093, 1129, 1270
AlwI	GGATC	2 cut(s)	430, 1185
Ama87I	CYCGRG	1 cut(s)	844
AoxI	GGCC	1 cut(s)	434
ApeKI	GCWGC	1 cut(s)	410
ApoI	RAATTY	2 cut(s)	183, 1147
AseI	ATTAAT	1 cut(s)	921
AspA2I	CCTAGG	1 cut(s)	500
AspS9I	GGNCC	1 cut(s)	991
AsuC2I	CCSGG	1 cut(s)	760
AsuHPI	GGTGA	3 cut(s)	491, 572, 1390
AvaI	CYCGRG	1 cut(s)	844
AvaII	GGWCC	1 cut(s)	991
AvrII	CCTAGG	1 cut(s)	500
AxyI	CCTNAGG	1 cut(s)	1283
BaeGI	GKGCMC	1 cut(s)	1267
BanI	GGYRCC	1 cut(s)	755
BbvI	GCAGC	1 cut(s)	397
BccI	CCATC	7 cut(s)	529, 551, 619, 726, 952, 1045, 1124
BciT130I	CCWGG	1 cut(s)	397
BciVI	GTATCC	2 cut(s)	672, 833
BclI	TGATCA	3 cut(s)	214, 970, 1072
BcnI	CCSGG	1 cut(s)	760
BcoDI	GTCTC	7 cut(s)	384, 405, 772, 843, 1093, 1129, 1270
BfaI	CTAG	7 cut(s)	228, 501, 617, 834, 1038, 1317, 1397
BfmI	CTRYAG	1 cut(s)	1164
BfuI	GTATCC	2 cut(s)	672, 833
BglII	AGATCT	1 cut(s)	1393
BisI	GCNGC	2 cut(s)	411, 957
BlnI	CCTAGG	1 cut(s)	500
BlsI	GCNGC	2 cut(s)	412, 958
Bme1390I	CCNGG	2 cut(s)	397, 760
Bme18I	GGWCC	1 cut(s)	991
BmeT110I	CYCGRG	1 cut(s)	844
BmgT120I	GGNCC	1 cut(s)	991
BmiI	GGNNCC	2 cut(s)	757, 992
BmrFI	CCNGG	2 cut(s)	397, 760
BmsI	GCATC	1 cut(s)	916
BplI	GAGNNNNNCTC	2 cut(s)	1145, 1177
BpmI	CTGGAG	1 cut(s)	514
Bpu10I	CCTNAGC	1 cut(s)	48
BpuEI	CTTGAG	1 cut(s)	638
BpuMI	CCSGG	1 cut(s)	760
BsaBI	GATNNNNATC	1 cut(s)	1077
BsaHI	GRCGYC	1 cut(s)	1279
BsaI	GGTCTC	1 cut(s)	405
BsaJI	CCNNGG	2 cut(s)	500, 813
BsaXI	ACNNNNNCTCC	2 cut(s)	101, 131
Bsc4I	CCNNNNNNNGG	2 cut(s)	617, 1272
Bse1I	ACTGG	1 cut(s)	787
Bse21I	CCTNAGG	1 cut(s)	1283
Bse3DI	GCAATG	1 cut(s)	630
Bse8I	GATNNNNATC	1 cut(s)	1077
BseBI	CCWGG	1 cut(s)	397
BseDI	CCNNGG	2 cut(s)	500, 813
BseGI	GGATG	5 cut(s)	237, 517, 521, 714, 982
BseJI	GATNNNNATC	1 cut(s)	1077
BseLI	CCNNNNNNNGG	2 cut(s)	617, 1272
BseMI	GCAATG	1 cut(s)	630
BseMII	CTCAG	4 cut(s)	137, 1104, 1190, 1274
BseNI	ACTGG	1 cut(s)	787
BseSI	GKGCMC	1 cut(s)	1267
BseXI	GCAGC	1 cut(s)	397
BseYI	CCCAGC	1 cut(s)	637
BshFI	GGCC	1 cut(s)	436
BshNI	GGYRCC	1 cut(s)	755
BsiHKCI	CYCGRG	1 cut(s)	844
BsiSI	CCGG	1 cut(s)	759
BslFI	GGGAC	3 cut(s)	69, 654, 1004
BslI	CCNNNNNNNGG	2 cut(s)	617, 1272
BsmAI	GTCTC	7 cut(s)	384, 405, 772, 843, 1093, 1129, 1270
BsmBI	CGTCTC	2 cut(s)	843, 1270
BsmFI	GGGAC	3 cut(s)	69, 654, 1004
BsnI	GGCC	1 cut(s)	436
Bso31I	GGTCTC	1 cut(s)	405
BsoBI	CYCGRG	1 cut(s)	844
Bsp1286I	GDGCHC	1 cut(s)	1267
Bsp1407I	TGTACA	1 cut(s)	337
Bsp143I	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
BspACI	CCGC	3 cut(s)	449, 957, 1252
BspANI	GGCC	1 cut(s)	436
BspCNI	CTCAG	4 cut(s)	138, 1103, 1189, 1275
BspLI	GGNNCC	2 cut(s)	757, 992
BspPI	GGATC	2 cut(s)	430, 1185
BspT107I	GGYRCC	1 cut(s)	755
BspTNI	GGTCTC	1 cut(s)	405
BsrDI	GCAATG	1 cut(s)	630
BsrGI	TGTACA	1 cut(s)	337
BsrI	ACTGG	1 cut(s)	787
BssECI	CCNNGG	2 cut(s)	500, 813
BssMI	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
BssNI	GRCGYC	1 cut(s)	1279
BssT1I	CCWWGG	1 cut(s)	500
Bst2UI	CCWGG	1 cut(s)	397
Bst4CI	ACNGT	2 cut(s)	1332, 1354
Bst6I	CTCTTC	2 cut(s)	1033, 1204
BstACI	GRCGYC	1 cut(s)	1279
BstAUI	TGTACA	1 cut(s)	337
BstDEI	CTNAG	7 cut(s)	48, 146, 669, 995, 1090, 1176, 1283
BstDSI	CCRYGG	1 cut(s)	813
BstF5I	GGATG	5 cut(s)	237, 517, 521, 714, 982
BstKTI	GATC	8 cut(s)	217, 323, 425, 731, 973, 1075, 1193, 1396
BstMAI	GTCTC	7 cut(s)	384, 405, 772, 843, 1093, 1129, 1270
BstMBI	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
BstMWI	GCNNNNNNNGC	2 cut(s)	913, 1310
BstNI	CCWGG	1 cut(s)	397
BstNSI	RCATGY	3 cut(s)	260, 744, 1247
BstSCI	CCNGG	2 cut(s)	395, 758
BstSFI	CTRYAG	1 cut(s)	1164
BstSLI	GKGCMC	1 cut(s)	1267
BstV1I	GCAGC	1 cut(s)	397
BstX2I	RGATCY	2 cut(s)	422, 1393
BstXI	CCANNNNNNTGG	2 cut(s)	538, 587
BstYI	RGATCY	2 cut(s)	422, 1393
Bsu36I	CCTNAGG	1 cut(s)	1283
BsuI	GTATCC	2 cut(s)	672, 833
BsuRI	GGCC	1 cut(s)	436
BtgI	CCRYGG	1 cut(s)	813
BtsCI	GGATG	5 cut(s)	237, 517, 521, 714, 982
BtsIMutI	CAGTG	2 cut(s)	738, 1231
Cfr13I	GGNCC	1 cut(s)	991
CseI	GACGC	1 cut(s)	1287
CsiI	ACCWGGT	1 cut(s)	395
Csp6I	GTAC	4 cut(s)	154, 260, 338, 709
CviAII	CATG	9 cut(s)	98, 157, 257, 335, 581, 741, 803, 1201, 1244
CviQI	GTAC	4 cut(s)	154, 260, 338, 709
DdeI	CTNAG	7 cut(s)	48, 146, 669, 995, 1090, 1176, 1283
DpnI	GATC	8 cut(s)	216, 322, 424, 730, 972, 1074, 1192, 1395
DpnII	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
Eam1104I	CTCTTC	2 cut(s)	1033, 1204
EarI	CTCTTC	2 cut(s)	1033, 1204
Eco130I	CCWWGG	1 cut(s)	500
Eco31I	GGTCTC	1 cut(s)	405
Eco47I	GGWCC	1 cut(s)	991
Eco81I	CCTNAGG	1 cut(s)	1283
Eco88I	CYCGRG	1 cut(s)	844
EcoO109I	RGGNCCY	1 cut(s)	991
EcoRII	CCWGG	1 cut(s)	395
EcoT14I	CCWWGG	1 cut(s)	500
EcoT22I	ATGCAT	2 cut(s)	746, 909
ErhI	CCWWGG	1 cut(s)	500
Esp3I	CGTCTC	2 cut(s)	843, 1270
FaeI	CATG	9 cut(s)	101, 160, 260, 338, 584, 744, 806, 1204, 1247
FaqI	GGGAC	3 cut(s)	69, 654, 1004
FatI	CATG	9 cut(s)	97, 156, 256, 334, 580, 740, 802, 1200, 1243
FauI	CCCGC	1 cut(s)	456
FauNDI	CATATG	3 cut(s)	723, 746, 1256
FbaI	TGATCA	3 cut(s)	214, 970, 1072
Fnu4HI	GCNGC	2 cut(s)	411, 957
FokI	GGATG	5 cut(s)	244, 504, 508, 701, 989
Fsp4HI	GCNGC	2 cut(s)	411, 957
FspBI	CTAG	7 cut(s)	228, 501, 617, 834, 1038, 1317, 1397
GluI	GCNGC	2 cut(s)	411, 957
GsaI	CCCAGC	1 cut(s)	641
GsuI	CTGGAG	1 cut(s)	514
HaeIII	GGCC	1 cut(s)	436
HapII	CCGG	1 cut(s)	759
HgaI	GACGC	1 cut(s)	1287
Hin1I	GRCGYC	1 cut(s)	1279
Hin1II	CATG	9 cut(s)	101, 160, 260, 338, 584, 744, 806, 1204, 1247
HincII	GTYRAC	3 cut(s)	577, 792, 897
HindII	GTYRAC	3 cut(s)	577, 792, 897
HinfI	GANTC	3 cut(s)	53, 364, 642
HpaII	CCGG	1 cut(s)	759
HphI	GGTGA	3 cut(s)	491, 572, 1390
Hpy166II	GTNNAC	3 cut(s)	577, 792, 897
Hpy188I	TCNGA	5 cut(s)	58, 244, 688, 1179, 1336
Hpy188III	TCNNGA	9 cut(s)	132, 218, 442, 655, 846, 911, 974, 982, 1067
Hpy8I	GTNNAC	3 cut(s)	577, 792, 897
HpyAV	CCTTC	1 cut(s)	1375
HpyCH4III	ACNGT	2 cut(s)	1332, 1354
HpyCH4IV	ACGT	1 cut(s)	852
HpyCH4V	TGCA	6 cut(s)	91, 572, 744, 907, 938, 1416
HpyF10VI	GCNNNNNNNGC	2 cut(s)	913, 1310
HpyF3I	CTNAG	7 cut(s)	48, 146, 669, 995, 1090, 1176, 1283
HpySE526I	ACGT	1 cut(s)	852
Hsp92I	GRCGYC	1 cut(s)	1279
Hsp92II	CATG	9 cut(s)	101, 160, 260, 338, 584, 744, 806, 1204, 1247
Ksp22I	TGATCA	3 cut(s)	214, 970, 1072
Kzo9I	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
LmnI	GCTCC	4 cut(s)	109, 620, 913, 1230
Lsp1109I	GCAGC	1 cut(s)	397
LweI	GCATC	1 cut(s)	916
MabI	ACCWGGT	1 cut(s)	395
MaeI	CTAG	7 cut(s)	228, 501, 617, 834, 1038, 1317, 1397
MaeII	ACGT	1 cut(s)	852
MaeIII	GTNAC	2 cut(s)	300, 1362
MalI	GATC	8 cut(s)	216, 322, 424, 730, 972, 1074, 1192, 1395
MboI	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
MboII	GAAGA	6 cut(s)	364, 954, 1020, 1073, 1221, 1403
MflI	RGATCY	2 cut(s)	422, 1393
MhlI	GDGCHC	1 cut(s)	1267
MluCI	AATT	6 cut(s)	183, 201, 594, 704, 808, 1147
MlyI	GAGTC	1 cut(s)	636
MmeI	TCCRAC	1 cut(s)	549
Mph1103I	ATGCAT	2 cut(s)	746, 909
MseI	TTAA	4 cut(s)	12, 807, 921, 1341
MslI	CAYNNNNRTG	4 cut(s)	296, 585, 745, 921
MspA1I	CMGCKG	1 cut(s)	1094
MspI	CCGG	1 cut(s)	759
MspR9I	CCNGG	2 cut(s)	397, 760
MvaI	CCWGG	1 cut(s)	397
MwoI	GCNNNNNNNGC	2 cut(s)	913, 1310
NciI	CCSGG	1 cut(s)	760
NdeI	CATATG	3 cut(s)	723, 746, 1256
NdeII	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
NlaIII	CATG	9 cut(s)	101, 160, 260, 338, 584, 744, 806, 1204, 1247
NlaIV	GGNNCC	2 cut(s)	757, 992
NmuCI	GTSAC	1 cut(s)	1362
NsiI	ATGCAT	2 cut(s)	746, 909
NspI	RCATGY	3 cut(s)	260, 744, 1247
PaeR7I	CTCGAG	1 cut(s)	844
PciI	ACATGT	1 cut(s)	1243
PfeI	GAWTC	2 cut(s)	53, 364
PkrI	GCNGC	2 cut(s)	412, 958
PleI	GAGTC	1 cut(s)	636
PpsI	GAGTC	1 cut(s)	636
PpuMI	RGGWCCY	1 cut(s)	991
PscI	ACATGT	1 cut(s)	1243
PshBI	ATTAAT	1 cut(s)	921
PsiI	TTATAA	1 cut(s)	26
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	1 cut(s)	395
PspFI	CCCAGC	1 cut(s)	637
PspGI	CCWGG	1 cut(s)	395
PspN4I	GGNNCC	2 cut(s)	757, 992
PspPI	GGNCC	1 cut(s)	991
PspPPI	RGGWCCY	1 cut(s)	991
PsuI	RGATCY	2 cut(s)	422, 1393
PvuII	CAGCTG	1 cut(s)	1094
RsaI	GTAC	4 cut(s)	155, 261, 339, 710
RsaNI	GTAC	4 cut(s)	154, 260, 338, 709
RseI	CAYNNNNRTG	4 cut(s)	296, 585, 745, 921
SaqAI	TTAA	4 cut(s)	12, 807, 921, 1341
SatI	GCNGC	2 cut(s)	411, 957
Sau3AI	GATC	8 cut(s)	214, 320, 422, 728, 970, 1072, 1190, 1393
Sau96I	GGNCC	1 cut(s)	991
SchI	GAGTC	1 cut(s)	636
ScrFI	CCNGG	2 cut(s)	397, 760
SduI	GDGCHC	1 cut(s)	1267
SexAI	ACCWGGT	1 cut(s)	395
SfaNI	GCATC	1 cut(s)	916
SfcI	CTRYAG	1 cut(s)	1164
Sfr274I	CTCGAG	1 cut(s)	844
SinI	GGWCC	1 cut(s)	991
SlaI	CTCGAG	1 cut(s)	844
SmiMI	CAYNNNNRTG	4 cut(s)	296, 585, 745, 921
SmlI	CTYRAG	2 cut(s)	653, 844
SmoI	CTYRAG	2 cut(s)	653, 844
Sse9I	AATT	6 cut(s)	183, 201, 594, 704, 808, 1147
SsiI	CCGC	3 cut(s)	449, 957, 1252
SspI	AATATT	1 cut(s)	248
SspMI	CTAG	7 cut(s)	228, 501, 617, 834, 1038, 1317, 1397
StyD4I	CCNGG	2 cut(s)	395, 758
StyI	CCWWGG	1 cut(s)	500
TaaI	ACNGT	2 cut(s)	1332, 1354
TaiI	ACGT	1 cut(s)	855
TaqI	TCGA	3 cut(s)	362, 845, 1189
TasI	AATT	6 cut(s)	183, 201, 594, 704, 808, 1147
TatI	WGTACW	2 cut(s)	153, 337
TauI	GCSGC	1 cut(s)	959
TfiI	GAWTC	2 cut(s)	53, 364
Tru1I	TTAA	4 cut(s)	12, 807, 921, 1341
Tru9I	TTAA	4 cut(s)	12, 807, 921, 1341
TscAI	CASTG	2 cut(s)	738, 1231
TseFI	GTSAC	1 cut(s)	1362
TseI	GCWGC	1 cut(s)	410
Tsp45I	GTSAC	1 cut(s)	1362
TspDTI	ATGAA	7 cut(s)	51, 641, 791, 944, 954, 1217, 1254
TspGWI	ACGGA	1 cut(s)	830
TspRI	CASTG	2 cut(s)	738, 1231
VpaK11BI	GGWCC	1 cut(s)	991
VspI	ATTAAT	1 cut(s)	921
XapI	RAATTY	2 cut(s)	183, 1147
XceI	RCATGY	3 cut(s)	260, 744, 1247
XhoI	CTCGAG	1 cut(s)	844
XmaJI	CCTAGG	1 cut(s)	500
XspI	CTAG	7 cut(s)	228, 501, 617, 834, 1038, 1317, 1397
Zsp2I	ATGCAT	2 cut(s)	746, 909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.