FvH4_2g10360

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
9241564 .. 9242351
788 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g10360.t1

Sequence Viewer

Length: 330 bp
ATGTGGATGATGCTGGTGGGTGTTTTGAAACTGTCAGCAACCAATGAATGGGTGTTAGGTGATAGATCTGCACCAATGAATAAAAAGGCCATTGTTAAGGCCATGCAGAATGACAGTGAAAGAAGAAAGAAACTCTACCTTCTTCAGTATGAAGCTGGAAGGGGTCCATACCCCATTGGTCTTCAGACCCAAATGCTCTCTGAATTTATTGAAGTATTCAGCCTCTCATTGAGCGGCAATCCAAGATACTTGACATTTGAAGGTTTGAAGACCCTTGTATACATATGTATGTTCATAAGCCAATCACAGCTTATTGTTGGCTATGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

110

Amino Acids

12.46

Weight (kDa)

9.1

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 48
AccBSI CCGCTC 1 cut(s) 234
AccI GTMKAC 1 cut(s) 279
AciI CCGC 1 cut(s) 234
AcsI RAATTY 1 cut(s) 203
AcuI CTGAAG 2 cut(s) 128, 167
AfiI CCNNNNNNNGG 1 cut(s) 48
AgsI TTSAA 4 cut(s) 28, 212, 260, 268
AluBI AGCT 2 cut(s) 155, 310
AluI AGCT 2 cut(s) 155, 310
AoxI GGCC 2 cut(s) 87, 99
ApoI RAATTY 1 cut(s) 203
AspS9I GGNCC 1 cut(s) 164
AsuHPI GGTGA 1 cut(s) 71
AvaII GGWCC 1 cut(s) 164
BbsI GAAGAC 2 cut(s) 173, 275
BfaI CTAG 1 cut(s) 328
BglII AGATCT 1 cut(s) 65
BisI GCNGC 1 cut(s) 235
BlsI GCNGC 1 cut(s) 236
Bme18I GGWCC 1 cut(s) 164
BmgT120I GGNCC 1 cut(s) 164
BmiI GGNNCC 1 cut(s) 165
BpiI GAAGAC 2 cut(s) 173, 275
Bsc4I CCNNNNNNNGG 1 cut(s) 48
BseGI GGATG 1 cut(s) 12
BseLI CCNNNNNNNGG 1 cut(s) 48
BsgI GTGCAG 1 cut(s) 54
BshFI GGCC 2 cut(s) 89, 101
BslI CCNNNNNNNGG 1 cut(s) 48
BsnI GGCC 2 cut(s) 89, 101
Bsp143I GATC 1 cut(s) 65
BspACI CCGC 1 cut(s) 234
BspANI GGCC 2 cut(s) 89, 101
BspLI GGNNCC 1 cut(s) 165
BsrBI CCGCTC 1 cut(s) 234
BssMI GATC 1 cut(s) 65
BssNAI GTATAC 1 cut(s) 280
Bst1107I GTATAC 1 cut(s) 280
Bst4CI ACNGT 2 cut(s) 33, 116
BstF5I GGATG 1 cut(s) 12
BstKTI GATC 1 cut(s) 68
BstMBI GATC 1 cut(s) 65
BstV2I GAAGAC 2 cut(s) 173, 275
BstX2I RGATCY 1 cut(s) 65
BstYI RGATCY 1 cut(s) 65
BstZ17I GTATAC 1 cut(s) 280
BsuRI GGCC 2 cut(s) 89, 101
BtsCI GGATG 1 cut(s) 12
BtsIMutI CAGTG 1 cut(s) 121
Cfr13I GGNCC 1 cut(s) 164
CviAII CATG 1 cut(s) 103
CviJI RGCY 7 cut(s) 89, 101, 155, 222, 300, 310, 321
CviKI_1 RGCY 7 cut(s) 89, 101, 155, 222, 300, 310, 321
DpnI GATC 1 cut(s) 67
DpnII GATC 1 cut(s) 65
Eco47I GGWCC 1 cut(s) 164
Eco57I CTGAAG 2 cut(s) 128, 167
FaeI CATG 1 cut(s) 106
FaiI YATR 9 cut(s) 104, 150, 169, 280, 284, 286, 290, 296, 324
FatI CATG 1 cut(s) 102
FauNDI CATATG 1 cut(s) 284
FblI GTMKAC 1 cut(s) 279
Fnu4HI GCNGC 1 cut(s) 235
FokI GGATG 1 cut(s) 19
Fsp4HI GCNGC 1 cut(s) 235
FspBI CTAG 1 cut(s) 328
GluI GCNGC 1 cut(s) 235
HaeIII GGCC 2 cut(s) 89, 101
Hin1II CATG 1 cut(s) 106
HphI GGTGA 1 cut(s) 71
Hpy166II GTNNAC 1 cut(s) 280
Hpy188I TCNGA 2 cut(s) 186, 202
Hpy8I GTNNAC 1 cut(s) 280
HpyAV CCTTC 3 cut(s) 149, 153, 254
HpyCH4III ACNGT 2 cut(s) 33, 116
HpyCH4V TGCA 2 cut(s) 71, 106
Hsp92II CATG 1 cut(s) 106
Kzo9I GATC 1 cut(s) 65
LpnPI CCDG 1 cut(s) 141
MaeI CTAG 1 cut(s) 328
MalI GATC 1 cut(s) 67
MbiI CCGCTC 1 cut(s) 234
MboI GATC 1 cut(s) 65
MboII GAAGA 4 cut(s) 134, 135, 173, 280
MflI RGATCY 1 cut(s) 65
MluCI AATT 1 cut(s) 203
MnlI CCTC 1 cut(s) 233
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 1 cut(s) 287
NdeI CATATG 1 cut(s) 284
NdeII GATC 1 cut(s) 65
NlaIII CATG 1 cut(s) 106
NlaIV GGNNCC 1 cut(s) 165
PflMI CCANNNNNTGG 1 cut(s) 48
PkrI GCNGC 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 165
PspPI GGNCC 1 cut(s) 164
PsuI RGATCY 1 cut(s) 65
RseI CAYNNNNRTG 1 cut(s) 287
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 1 cut(s) 235
Sau3AI GATC 1 cut(s) 65
Sau96I GGNCC 1 cut(s) 164
SetI ASST 5 cut(s) 61, 141, 157, 265, 312
SgeI CNNG 6 cut(s) 26, 115, 168, 255, 262, 287
SinI GGWCC 1 cut(s) 164
SmiMI CAYNNNNRTG 1 cut(s) 287
Sse9I AATT 1 cut(s) 203
SsiI CCGC 1 cut(s) 234
SspMI CTAG 1 cut(s) 328
TaaI ACNGT 2 cut(s) 33, 116
TasI AATT 1 cut(s) 203
TauI GCSGC 1 cut(s) 237
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TscAI CASTG 1 cut(s) 121
TspDTI ATGAA 4 cut(s) 60, 92, 165, 283
TspRI CASTG 1 cut(s) 121
Van91I CCANNNNNTGG 1 cut(s) 48
VpaK11BI GGWCC 1 cut(s) 164
XapI RAATTY 1 cut(s) 203
XmiI GTMKAC 1 cut(s) 279
XspI CTAG 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.