Rorug05G0222300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005470
Physical Location & Seq
Forward (+)
23029246 .. 23032861
3616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0222300.1

Sequence Viewer

Length: 2619 bp
ATGAATCAATTTGCTCCCCTTTTTTATTTTGTTACCATACTTTTAGCATTTAGGCCAATTGCTGCAAATACAGTGAGGAATATTGAAGCTGGAAAGGGCGTCGTCGTTAACGTTGGGGCCATTATAGATAACAGTTCTCGAATTGGCAAAGAACAGAGAGTGGCAATGGAAATGGCAATGGAGGATTTTTGTGCAAATAACAATCAGAGATTGGTTCTGCAAATAAAACACTCTCAGAGGGATCCCATGCAGGCGGCTCTTGCAGCTAGAGATCTCATAAATATGCAAGAAGTCCAAGCCATTCTAGGACCACATACATGGGAAGAGACATCAGTAGTAGCTGGGGTTGGCAGTGAGAACCACATTCCAATTGTTTCTTTTGCGGAGGCTACTCCAAACTGGGCAACAGAGCTCTGGCCCTTCCTAGTTCAAGCTTCTCATAACGAGCTAAAACAAATGGAAGCAGTAGCTGCTATAGTTAAGTCTTTTGAATGGTATCAGGTCACTGTTATATTCCAAGATAGAGATTATTCGTCCAACGAAATTTTGCCTGGCCTCTCTCGTGCCTTGAGACAAGTTGGCTCAGAAATAAGCCAGCTCGTAGCTCTTCCCCCTTTCGGTTCTTCTTCATTAGTCAGAGAGCTTGAGAAGCTTCAACAAGACCAATATAGAGTTGTCATCGTGCATTTGTCTTTGCCGTTGGCATTGCAACTATTTGAAAAAGCTAAAGAAATGAAGATGATGGAAAAAGACTATGTATGGATCACCACAGATCCTATTACTAGCCTAGTACATTCCTTCAATGCCTCCACCATTTCCGCAATGCAGGGGGTTATCGGAGTCAAGAGCTTCTTCCCTGAAAGTGAGAGTCCCCAATTTCAGGGTTTTCATCGTAGATTTCGTAAAAGGTTCAGCTCAGAATATCCTGAAGAAGAAAACAATGATCCTGGGGTCTTTGCGGCACAGGCCTATGATGCTGCAAGGGCAGTGGTTCTAGCAGTGACACAAAGAAAACACAATGGGAGGCCCTTGTTGGAAAATATTCTTCGAAGTGATTTTCATGGCTTAAGTGGAAAAATTCAGTTCACTGACCAAAAATTACCACTACAAAAAATGTTCCAGATCATCAATGTTATAGGAAAGAGTTATAGAGAACTCGGATATTGGTCAGATGGATTAGGCTTCACACAGACTATCGGGGGAAATGATACTACCAGCTCATCCATGAAAGATTTTGGACCAGTGTTTTGGCCAGGGGGGCCTTTCTATACTCCAAAAGGATGGACTGTATCAACAAGTTCAAAGCCATTGAGAATCGGCGTGCCTACCGGAGCGGCATTCAAACAGTATGTAAAAGTAGAAAAAGATCCCTTGGGTAATAACTTCTTATTTGGTGGAATTGCAATTGATCTCTTCGAAGAAACCCTAATCGAGCTGCCTTATCATTTGCCATATGAATTCTACCCATTTAATGGCACATATGATTCATTAGTGCAGCAAATTCATTCTAGTAAATTTGATGCTGTAGTTGGTGATGTAGCAATAGTGTCTCAAAGATATCAGTATGCAGAATTCACACACCCCTATTCTGAAGCAGGACTGATGATGATAGTTCCAGTCAGGTCCAAATTTTCCAACAAAGCATGGTTATTCATGAACCCTTTCACACGAGCCATGTGGGCGCTCATAGTGGCCATCAATGTCTACAATGGTTTTATCGTTTGGTTGATAGAGCGCAACTACTGTCCCGAACTCAGAGGTTCTCTGCCAAATCAAATTGGAACCTTGATTTGGCTTTCCTTCACCACTCTATTCTCCTTACATGGAGAAAAGCTACATAGCAATTTGTCAAGGATGACAATGGTGGTCTGGTTATTTGTCGCACTAGTCATCACACAGACATACACCGCCAACCTCACCAGCATGCTCACGGTCCAGCAACTTGAACCAGCTGTAGCAGATGTTGATGCACTTCGACAAAGCAATGCCGTTGTTGGTTATTGTAAAGGATCATTTGTTTCTATGTATCTAAAGAAAGTCTTGAAATTTTCCCCTGATCACATTCAGGAGTTTAGCTCCCCGGAAGAGTATGCAAAAGCCCTCAAAAGCAAAGCAATTGCTGCTGCATTTCTTGAAGTCCCTTTTGCCAAGATATTCCTCGGACAATACTGCAAAGATTTTGTGTCGGTTGGGCCAACATTCAAAGTCGGAGGATTTGGATTCGCATTTCCAAGGGGGTCACCATTACTTCCGAGTGTAAATGAAGCAATGCTGAAGGTGGCCGAAAGTGGTAAGCTTCGAGATTTGGAGAACAACATGCTGGCATCTCAGAAATGCTTGGATGCAGAAACAGATGGTAGAACCCCAAGTCTAAGCCCCAGCAGCTTTTGGGTACTATTCACATTCTCAGGAGGGACATCAACAATTGCTCTTCTGGTTTACATTTTCCGCATTTATAAATCGATGCTTAAGCACAAAACAGTCTGGAACTTAATGTTGGCTGTAATCAACCAATGGGGGAATCCAAGTATGCAGAGGTTCTCAAGAAGAGATAGCGACATTAATCCAGAAACTCCGACACATTCTGCAAATGTCCCTAACTTGCAGGCTCAGGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

872

Amino Acids

97.78

Weight (kDa)

7.67

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 36 - 364 1e-25 Periplasmic binding protein
ANF_receptor PF01094 54 - 380 1.7e-54 Receptor family ligand binding region
SBP_bac_3 PF00497 465 - 771 8.1e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 558 - 802 2.1e-24 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2457
AccB7I CCANNNNNTGG 1 cut(s) 1472
AccBSI CCGCTC 1 cut(s) 1334
AccI GTMKAC 1 cut(s) 1704
AciI CCGC 7 cut(s) 254, 383, 819, 959, 1334, 1908, 2449
AclI AACGTT 1 cut(s) 111
AclWI GGATC 7 cut(s) 236, 249, 767, 770, 938, 1361, 2017
AcoI YGGCCR 3 cut(s) 1250, 1692, 2280
AcsI RAATTY 8 cut(s) 543, 1077, 1457, 1500, 1514, 1571, 1628, 2045
AcuI CTGAAG 3 cut(s) 948, 1611, 2294
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 2 cut(s) 792, 2394
AfiI CCNNNNNNNGG 4 cut(s) 617, 880, 1472, 1791
AflII CTTAAG 2 cut(s) 1066, 2468
AhlI ACTAGT 1 cut(s) 1885
AjnI CCWGG 3 cut(s) 550, 946, 1252
AjuI GAANNNNNNNTTGG 4 cut(s) 1774, 1806, 2480, 2512
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 3 cut(s) 320, 565, 1554
AlwI GGATC 7 cut(s) 236, 249, 767, 770, 938, 1361, 2017
AlwNI CAGNNNCTG 1 cut(s) 470
ApeKI GCWGC 9 cut(s) 62, 263, 470, 977, 1435, 1495, 2120, 2123, 2382
ApoI RAATTY 8 cut(s) 543, 1077, 1457, 1500, 1514, 1571, 1628, 2045
ArsI GACNNNNNNTTYG 2 cut(s) 1230, 1262
AseI ATTAAT 1 cut(s) 2562
Asp700I GAANNNNTTC 2 cut(s) 1041, 1661
AspLEI GCGC 2 cut(s) 1684, 1737
AspS9I GGNCC 9 cut(s) 117, 308, 417, 1026, 1238, 1259, 1623, 1933, 2192
AsuC2I CCSGG 1 cut(s) 2081
AsuHPI GGTGA 5 cut(s) 757, 1544, 1795, 1909, 2232
AsuII TTCGAA 2 cut(s) 1048, 1416
AvaII GGWCC 4 cut(s) 308, 1238, 1623, 1933
BalI TGGCCA 2 cut(s) 1252, 1694
BamHI GGATCC 1 cut(s) 241
BanII GRGCYC 1 cut(s) 414
BauI CACGAG 2 cut(s) 561, 1668
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 9 cut(s) 49, 275, 457, 964, 1422, 1507, 2107, 2110, 2394
BccI CCATC 5 cut(s) 736, 1166, 1275, 1703, 2348
BceAI ACGGC 2 cut(s) 682, 1973
BciT130I CCWGG 3 cut(s) 552, 948, 1254
BclI TGATCA 1 cut(s) 2056
BcnI CCSGG 1 cut(s) 2081
BcoDI GTCTC 3 cut(s) 320, 565, 1554
BcuI ACTAGT 1 cut(s) 1885
BfaI CTAG 9 cut(s) 267, 305, 425, 783, 788, 995, 1509, 1886, 2617
BfmI CTRYAG 3 cut(s) 474, 1524, 1953
BfoI RGCGCY 1 cut(s) 1685
BfrI CTTAAG 2 cut(s) 1066, 2468
BglI GCCNNNNNGGC 2 cut(s) 1258, 1679
BglII AGATCT 1 cut(s) 271
Bme1390I CCNGG 4 cut(s) 552, 948, 1254, 2081
Bme18I GGWCC 4 cut(s) 308, 1238, 1623, 1933
BmgT120I GGNCC 9 cut(s) 117, 308, 417, 1026, 1238, 1259, 1623, 1933, 2192
BmiI GGNNCC 4 cut(s) 118, 243, 1260, 1783
BmrFI CCNGG 4 cut(s) 552, 948, 1254, 2081
BmrI ACTGGG 1 cut(s) 409
BmsI GCATC 6 cut(s) 964, 1510, 1957, 2332, 2333, 2454
BmuI ACTGGG 1 cut(s) 409
BplI GAGNNNNNCTC 2 cut(s) 2060, 2092
Bpu10I CCTNAGC 1 cut(s) 2610
Bpu14I TTCGAA 2 cut(s) 1048, 1416
BpuEI CTTGAG 3 cut(s) 589, 665, 2527
BpuMI CCSGG 1 cut(s) 2081
Bsa29I ATCGAT 1 cut(s) 2462
BsaHI GRCGYC 1 cut(s) 99
BsaJI CCNNGG 6 cut(s) 947, 1253, 1371, 2079, 2158, 2231
BsaWI WCCGGW 1 cut(s) 1328
Bsc4I CCNNNNNNNGG 4 cut(s) 617, 880, 1472, 1791
Bse1I ACTGG 3 cut(s) 404, 1241, 1616
Bse3DI GCAATG 6 cut(s) 171, 183, 704, 828, 1990, 2274
BseBI CCWGG 3 cut(s) 552, 948, 1254
BseCI ATCGAT 1 cut(s) 2462
BseDI CCNNGG 6 cut(s) 947, 1253, 1371, 2079, 2158, 2231
BseGI GGATG 4 cut(s) 1220, 1286, 1860, 2347
BseLI CCNNNNNNNGG 4 cut(s) 617, 880, 1472, 1791
BseMI GCAATG 6 cut(s) 171, 183, 704, 828, 1990, 2274
BseMII CTCAG 6 cut(s) 248, 597, 930, 1768, 2342, 2421
BseNI ACTGG 3 cut(s) 404, 1241, 1616
BseXI GCAGC 9 cut(s) 49, 275, 457, 964, 1422, 1507, 2107, 2110, 2394
BseYI CCCAGC 2 cut(s) 341, 2378
BsgI GTGCAG 1 cut(s) 1514
BshVI ATCGAT 1 cut(s) 2462
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 2 cut(s) 1329, 2081
BslFI GGGAC 5 cut(s) 855, 1731, 2123, 2428, 2579
BslI CCNNNNNNNGG 4 cut(s) 617, 880, 1472, 1791
BsmAI GTCTC 3 cut(s) 320, 565, 1554
BsmFI GGGAC 5 cut(s) 855, 1731, 2123, 2428, 2579
BsmI GAATGC 1 cut(s) 1337
Bsp119I TTCGAA 2 cut(s) 1048, 1416
Bsp1286I GDGCHC 1 cut(s) 414
BspACI CCGC 7 cut(s) 254, 383, 819, 959, 1334, 1908, 2449
BspCNI CTCAG 6 cut(s) 247, 596, 929, 1767, 2341, 2420
BspDI ATCGAT 1 cut(s) 2462
BspHI TCATGA 1 cut(s) 1653
BspLI GGNNCC 4 cut(s) 118, 243, 1260, 1783
BspPI GGATC 7 cut(s) 236, 249, 767, 770, 938, 1361, 2017
BspQI GCTCTTC 2 cut(s) 612, 2436
BspT104I TTCGAA 2 cut(s) 1048, 1416
BspTI CTTAAG 2 cut(s) 1066, 2468
BsrBI CCGCTC 1 cut(s) 1334
BsrDI GCAATG 6 cut(s) 171, 183, 704, 828, 1990, 2274
BsrI ACTGG 3 cut(s) 404, 1241, 1616
BssECI CCNNGG 6 cut(s) 947, 1253, 1371, 2079, 2158, 2231
BssNI GRCGYC 1 cut(s) 99
BssSI CACGAG 2 cut(s) 561, 1668
BssT1I CCWWGG 2 cut(s) 1371, 2231
Bst2BI CACGAG 2 cut(s) 561, 1668
Bst2UI CCWGG 3 cut(s) 552, 948, 1254
Bst4CI ACNGT 8 cut(s) 73, 134, 508, 1288, 1347, 1745, 1933, 2482
Bst6I CTCTTC 6 cut(s) 318, 612, 1418, 2079, 2436, 2542
BstACI GRCGYC 1 cut(s) 99
BstAFI CTTAAG 2 cut(s) 1066, 2468
BstAPI GCANNNNNTGC 2 cut(s) 470, 2120
BstBI TTCGAA 2 cut(s) 1048, 1416
BstC8I GCNNGC 6 cut(s) 252, 596, 1322, 1925, 2322, 2607
BstDEI CTNAG 8 cut(s) 234, 583, 916, 1754, 2328, 2372, 2407, 2610
BstEII GGTNACC 1 cut(s) 2238
BstF5I GGATG 4 cut(s) 1220, 1286, 1860, 2347
BstH2I RGCGCY 1 cut(s) 1685
BstHHI GCGC 2 cut(s) 1684, 1737
BstMAI GTCTC 3 cut(s) 320, 565, 1554
BstNI CCWGG 3 cut(s) 552, 948, 1254
BstNSI RCATGY 2 cut(s) 1927, 2320
BstPI GGTNACC 1 cut(s) 2238
BstSCI CCNGG 4 cut(s) 550, 946, 1252, 2079
BstSFI CTRYAG 3 cut(s) 474, 1524, 1953
BstV1I GCAGC 9 cut(s) 49, 275, 457, 964, 1422, 1507, 2107, 2110, 2394
BstX2I RGATCY 4 cut(s) 241, 271, 772, 1366
BstXI CCANNNNNNTGG 3 cut(s) 318, 1248, 1281
BstYI RGATCY 4 cut(s) 241, 271, 772, 1366
Bsu15I ATCGAT 1 cut(s) 2462
BsuTUI ATCGAT 1 cut(s) 2462
BtsCI GGATG 4 cut(s) 1220, 1286, 1860, 2347
BtsI GCAGTG 3 cut(s) 358, 993, 1005
BtsIMutI CAGTG 7 cut(s) 78, 358, 504, 993, 1005, 1086, 1248
Cac8I GCNNGC 6 cut(s) 252, 596, 1322, 1925, 2322, 2607
CaiI CAGNNNCTG 1 cut(s) 470
CciI TCATGA 1 cut(s) 1653
CfoI GCGC 2 cut(s) 1684, 1737
Cfr13I GGNCC 9 cut(s) 117, 308, 417, 1026, 1238, 1259, 1623, 1933, 2192
ClaI ATCGAT 1 cut(s) 2462
CseI GACGC 1 cut(s) 88
Csp6I GTAC 2 cut(s) 791, 2393
CspCI CAANNNNNGTGG 2 cut(s) 969, 1004
CviQI GTAC 2 cut(s) 791, 2393
DdeI CTNAG 8 cut(s) 234, 583, 916, 1754, 2328, 2372, 2407, 2610
EaeI YGGCCR 3 cut(s) 1250, 1692, 2280
Eam1104I CTCTTC 6 cut(s) 318, 612, 1418, 2079, 2436, 2542
EarI CTCTTC 6 cut(s) 318, 612, 1418, 2079, 2436, 2542
Ecl136II GAGCTC 1 cut(s) 412
Eco130I CCWWGG 2 cut(s) 1371, 2231
Eco147I AGGCCT 1 cut(s) 968
Eco24I GRGCYC 1 cut(s) 414
Eco32I GATATC 1 cut(s) 1559
Eco47I GGWCC 4 cut(s) 308, 1238, 1623, 1933
Eco53kI GAGCTC 1 cut(s) 412
Eco57I CTGAAG 3 cut(s) 948, 1611, 2294
Eco91I GGTNACC 1 cut(s) 2238
EcoICRI GAGCTC 1 cut(s) 412
EcoO109I RGGNCCY 2 cut(s) 1026, 1259
EcoO65I GGTNACC 1 cut(s) 2238
EcoRI GAATTC 2 cut(s) 1457, 1571
EcoRII CCWGG 3 cut(s) 550, 946, 1252
EcoRV GATATC 1 cut(s) 1559
EcoT14I CCWWGG 2 cut(s) 1371, 2231
EcoT38I GRGCYC 1 cut(s) 414
ErhI CCWWGG 2 cut(s) 1371, 2231
FalI AAGNNNNNCTT 4 cut(s) 836, 868, 2024, 2056
FaqI GGGAC 5 cut(s) 855, 1731, 2123, 2428, 2579
FauNDI CATATG 2 cut(s) 1453, 1480
FbaI TGATCA 1 cut(s) 2056
FblI GTMKAC 1 cut(s) 1704
FokI GGATG 4 cut(s) 1207, 1293, 1867, 2354
FriOI GRGCYC 1 cut(s) 414
FspBI CTAG 9 cut(s) 267, 305, 425, 783, 788, 995, 1509, 1886, 2617
GlaI GCGC 2 cut(s) 1683, 1736
GsaI CCCAGC 2 cut(s) 345, 2382
HaeII RGCGCY 1 cut(s) 1685
HapII CCGG 2 cut(s) 1329, 2081
HgaI GACGC 1 cut(s) 88
HhaI GCGC 2 cut(s) 1684, 1737
Hin1I GRCGYC 1 cut(s) 99
Hin6I GCGC 2 cut(s) 1682, 1735
HinP1I GCGC 2 cut(s) 1682, 1735
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
HindIII AAGCTT 3 cut(s) 432, 650, 2294
HinfI GANTC 7 cut(s) 4, 840, 868, 1314, 1484, 2220, 2521
HpaI GTTAAC 1 cut(s) 109
HpaII CCGG 2 cut(s) 1329, 2081
HphI GGTGA 5 cut(s) 757, 1544, 1795, 1909, 2232
Hpy166II GTNNAC 4 cut(s) 109, 1086, 1705, 2440
Hpy8I GTNNAC 4 cut(s) 109, 1086, 1705, 2440
Hpy99I CGWCG 2 cut(s) 104, 107
HpyAV CCTTC 4 cut(s) 430, 808, 1810, 2269
HpyCH4III ACNGT 8 cut(s) 73, 134, 508, 1288, 1347, 1745, 1933, 2482
HpyCH4IV ACGT 1 cut(s) 111
HpyF3I CTNAG 8 cut(s) 234, 583, 916, 1754, 2328, 2372, 2407, 2610
HpySE526I ACGT 1 cut(s) 111
Hsp92I GRCGYC 1 cut(s) 99
HspAI GCGC 2 cut(s) 1682, 1735
Ksp22I TGATCA 1 cut(s) 2056
KspAI GTTAAC 1 cut(s) 109
LguI GCTCTTC 2 cut(s) 612, 2436
LmnI GCTCC 3 cut(s) 19, 1331, 2081
Lsp1109I GCAGC 9 cut(s) 49, 275, 457, 964, 1422, 1507, 2107, 2110, 2394
LweI GCATC 6 cut(s) 964, 1510, 1957, 2332, 2333, 2454
MaeI CTAG 9 cut(s) 267, 305, 425, 783, 788, 995, 1509, 1886, 2617
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 4 cut(s) 31, 502, 1000, 2238
MbiI CCGCTC 1 cut(s) 1334
MfeI CAATTG 5 cut(s) 57, 369, 1404, 2115, 2424
MflI RGATCY 4 cut(s) 241, 271, 772, 1366
MhlI GDGCHC 1 cut(s) 414
MlsI TGGCCA 2 cut(s) 1252, 1694
MluNI TGGCCA 2 cut(s) 1252, 1694
MlyI GAGTC 2 cut(s) 849, 877
MmeI TCCRAC 5 cut(s) 561, 1014, 1659, 2188, 2600
Mox20I TGGCCA 2 cut(s) 1252, 1694
MroXI GAANNNNTTC 2 cut(s) 1041, 1661
MscI TGGCCA 2 cut(s) 1252, 1694
MseI TTAA 7 cut(s) 108, 480, 1067, 1470, 2469, 2492, 2562
MslI CAYNNNNRTG 3 cut(s) 281, 316, 1922
Msp20I TGGCCA 2 cut(s) 1252, 1694
MspA1I CMGCKG 1 cut(s) 1952
MspCI CTTAAG 2 cut(s) 1066, 2468
MspI CCGG 2 cut(s) 1329, 2081
MspR9I CCNGG 4 cut(s) 552, 948, 1254, 2081
MunI CAATTG 5 cut(s) 57, 369, 1404, 2115, 2424
Mva1269I GAATGC 1 cut(s) 1337
MvaI CCWGG 3 cut(s) 552, 948, 1254
NciI CCSGG 1 cut(s) 2081
NdeI CATATG 2 cut(s) 1453, 1480
NlaIV GGNNCC 4 cut(s) 118, 243, 1260, 1783
NmuCI GTSAC 3 cut(s) 502, 1000, 2238
NspI RCATGY 2 cut(s) 1927, 2320
NspV TTCGAA 2 cut(s) 1048, 1416
PaeI GCATGC 1 cut(s) 1927
PagI TCATGA 1 cut(s) 1653
PceI AGGCCT 1 cut(s) 968
PciSI GCTCTTC 2 cut(s) 612, 2436
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 898
PctI GAATGC 1 cut(s) 1337
PdmI GAANNNNTTC 2 cut(s) 1041, 1661
PfeI GAWTC 5 cut(s) 4, 1314, 1484, 2220, 2521
PflMI CCANNNNNTGG 1 cut(s) 1472
PleI GAGTC 2 cut(s) 848, 876
PpsI GAGTC 2 cut(s) 848, 876
PshBI ATTAAT 1 cut(s) 2562
PsiI TTATAA 1 cut(s) 2457
Psp124BI GAGCTC 1 cut(s) 414
Psp1406I AACGTT 1 cut(s) 111
Psp6I CCWGG 3 cut(s) 550, 946, 1252
PspEI GGTNACC 1 cut(s) 2238
PspFI CCCAGC 2 cut(s) 341, 2378
PspGI CCWGG 3 cut(s) 550, 946, 1252
PspN4I GGNNCC 4 cut(s) 118, 243, 1260, 1783
PspPI GGNCC 9 cut(s) 117, 308, 417, 1026, 1238, 1259, 1623, 1933, 2192
PstNI CAGNNNCTG 1 cut(s) 470
PsuI RGATCY 4 cut(s) 241, 271, 772, 1366
PvuII CAGCTG 1 cut(s) 1952
RsaI GTAC 2 cut(s) 792, 2394
RsaNI GTAC 2 cut(s) 791, 2393
RseI CAYNNNNRTG 3 cut(s) 281, 316, 1922
SacI GAGCTC 1 cut(s) 414
SapI GCTCTTC 2 cut(s) 612, 2436
SaqAI TTAA 7 cut(s) 108, 480, 1067, 1470, 2469, 2492, 2562
Sau96I GGNCC 9 cut(s) 117, 308, 417, 1026, 1238, 1259, 1623, 1933, 2192
SchI GAGTC 2 cut(s) 849, 877
ScrFI CCNGG 4 cut(s) 552, 948, 1254, 2081
SduI GDGCHC 1 cut(s) 414
SfaNI GCATC 6 cut(s) 964, 1510, 1957, 2332, 2333, 2454
SfcI CTRYAG 3 cut(s) 474, 1524, 1953
SfiI GGCCNNNNNGGCC 1 cut(s) 1258
SfuI TTCGAA 2 cut(s) 1048, 1416
SinI GGWCC 4 cut(s) 308, 1238, 1623, 1933
SmiMI CAYNNNNRTG 3 cut(s) 281, 316, 1922
SmlI CTYRAG 5 cut(s) 568, 644, 1066, 2468, 2542
SmoI CTYRAG 5 cut(s) 568, 644, 1066, 2468, 2542
SpeI ACTAGT 1 cut(s) 1885
SphI GCATGC 1 cut(s) 1927
SseBI AGGCCT 1 cut(s) 968
SsiI CCGC 7 cut(s) 254, 383, 819, 959, 1334, 1908, 2449
SspI AATATT 2 cut(s) 82, 1042
SspMI CTAG 9 cut(s) 267, 305, 425, 783, 788, 995, 1509, 1886, 2617
SstI GAGCTC 1 cut(s) 414
StuI AGGCCT 1 cut(s) 968
StyD4I CCNGG 4 cut(s) 550, 946, 1252, 2079
StyI CCWWGG 2 cut(s) 1371, 2231
TaaI ACNGT 8 cut(s) 73, 134, 508, 1288, 1347, 1745, 1933, 2482
TaiI ACGT 1 cut(s) 114
TaqI TCGA 7 cut(s) 139, 1048, 1416, 1431, 1975, 2299, 2462
TatI WGTACW 1 cut(s) 790
TauI GCSGC 3 cut(s) 257, 962, 1337
TfiI GAWTC 5 cut(s) 4, 1314, 1484, 2220, 2521
Tru1I TTAA 7 cut(s) 108, 480, 1067, 1470, 2469, 2492, 2562
Tru9I TTAA 7 cut(s) 108, 480, 1067, 1470, 2469, 2492, 2562
TscAI CASTG 7 cut(s) 78, 358, 511, 993, 1005, 1093, 1248
TseFI GTSAC 3 cut(s) 502, 1000, 2238
TseI GCWGC 9 cut(s) 62, 263, 470, 977, 1435, 1495, 2120, 2123, 2382
Tsp45I GTSAC 3 cut(s) 502, 1000, 2238
TspRI CASTG 7 cut(s) 78, 358, 511, 993, 1005, 1093, 1248
Van91I CCANNNNNTGG 1 cut(s) 1472
Vha464I CTTAAG 2 cut(s) 1066, 2468
VpaK11BI GGWCC 4 cut(s) 308, 1238, 1623, 1933
VspI ATTAAT 1 cut(s) 2562
XapI RAATTY 8 cut(s) 543, 1077, 1457, 1500, 1514, 1571, 1628, 2045
XceI RCATGY 2 cut(s) 1927, 2320
XmiI GTMKAC 1 cut(s) 1704
XmnI GAANNNNTTC 2 cut(s) 1041, 1661
XspI CTAG 9 cut(s) 267, 305, 425, 783, 788, 995, 1509, 1886, 2617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.