FvH4_2g10370

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
9243449 .. 9244248
800 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g10370.t1

Sequence Viewer

Length: 318 bp
ATGGAGTCATCCACCCAGGGTGCTATCAGTTATGCGACAGGAGTTCTATTCAGAATTGGAATAAGAAGTCAAGATCTGGAGGATTCTCTAGAGAAATTGATTAAGGGATGTGGTATGGCTCTTCCATCTCCAAGGCTTGTCTTACCAGCAGCAATATATGGCTTGTGGATCCTTTCTCATCAATATATTTCAAGTGATCTCTTTGATTTTCAGCTTGTGCCAACTATGGTTGGGTTGTTTGTTTATAAAGCCACTGCTCTTGTTCAAGTCTATAGAGATAACGAAGACCTGCAATTGATCTTTCCTGATGACATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

106

Amino Acids

11.7

Weight (kDa)

4.51

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 246
Acc36I ACCTGC 1 cut(s) 297
AclWI GGATC 2 cut(s) 163, 176
AgsI TTSAA 2 cut(s) 192, 266
AjnI CCWGG 1 cut(s) 15
AluBI AGCT 1 cut(s) 214
AluI AGCT 1 cut(s) 214
AlwI GGATC 2 cut(s) 163, 176
ApeKI GCWGC 1 cut(s) 149
BamHI GGATCC 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 291
BbvI GCAGC 1 cut(s) 161
BccI CCATC 1 cut(s) 133
BciT130I CCWGG 1 cut(s) 17
BfaI CTAG 1 cut(s) 89
BfmI CTRYAG 1 cut(s) 271
BfuAI ACCTGC 1 cut(s) 297
BglII AGATCT 1 cut(s) 73
BisI GCNGC 1 cut(s) 150
BlsI GCNGC 1 cut(s) 151
Bme1390I CCNGG 1 cut(s) 17
BmiI GGNNCC 1 cut(s) 170
BmrFI CCNGG 1 cut(s) 17
BpiI GAAGAC 1 cut(s) 291
BpmI CTGGAG 1 cut(s) 98
BsaJI CCNNGG 3 cut(s) 15, 16, 131
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 3 cut(s) 15, 16, 131
BseGI GGATG 2 cut(s) 8, 113
BseXI GCAGC 1 cut(s) 161
Bsp143I GATC 4 cut(s) 73, 168, 196, 297
BspLI GGNNCC 1 cut(s) 170
BspMI ACCTGC 1 cut(s) 297
BspPI GGATC 2 cut(s) 163, 176
BspQI GCTCTTC 1 cut(s) 126
BssECI CCNNGG 3 cut(s) 15, 16, 131
BssMI GATC 4 cut(s) 73, 168, 196, 297
BssT1I CCWWGG 1 cut(s) 131
Bst2UI CCWGG 1 cut(s) 17
Bst6I CTCTTC 1 cut(s) 126
BstF5I GGATG 2 cut(s) 8, 113
BstKTI GATC 4 cut(s) 76, 171, 199, 300
BstMBI GATC 4 cut(s) 73, 168, 196, 297
BstNI CCWGG 1 cut(s) 17
BstSCI CCNGG 1 cut(s) 15
BstSFI CTRYAG 1 cut(s) 271
BstV1I GCAGC 1 cut(s) 161
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 2 cut(s) 73, 168
BstYI RGATCY 2 cut(s) 73, 168
BtsCI GGATG 2 cut(s) 8, 113
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 1 cut(s) 252
BveI ACCTGC 1 cut(s) 297
CspCI CAANNNNNGTGG 2 cut(s) 241, 276
CviJI RGCY 5 cut(s) 119, 136, 162, 214, 251
CviKI_1 RGCY 5 cut(s) 119, 136, 162, 214, 251
DpnI GATC 4 cut(s) 75, 170, 198, 299
DpnII GATC 4 cut(s) 73, 168, 196, 297
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
Eco130I CCWWGG 1 cut(s) 131
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 1 cut(s) 131
ErhI CCWWGG 1 cut(s) 131
FaiI YATR 8 cut(s) 33, 116, 157, 159, 186, 227, 246, 273
Fnu4HI GCNGC 1 cut(s) 150
FokI GGATG 1 cut(s) 120
Fsp4HI GCNGC 1 cut(s) 150
FspBI CTAG 1 cut(s) 89
GluI GCNGC 1 cut(s) 150
GsuI CTGGAG 1 cut(s) 98
HinfI GANTC 2 cut(s) 5, 83
Hpy188I TCNGA 1 cut(s) 53
Hpy188III TCNNGA 4 cut(s) 71, 77, 89, 305
HpyCH4V TGCA 1 cut(s) 292
Kzo9I GATC 4 cut(s) 73, 168, 196, 297
LguI GCTCTTC 1 cut(s) 126
LpnPI CCDG 6 cut(s) 2, 24, 29, 62, 159, 302
Lsp1109I GCAGC 1 cut(s) 161
MaeI CTAG 1 cut(s) 89
MalI GATC 4 cut(s) 75, 170, 198, 299
MboI GATC 4 cut(s) 73, 168, 196, 297
MboII GAAGA 2 cut(s) 113, 296
MfeI CAATTG 1 cut(s) 293
MflI RGATCY 2 cut(s) 73, 168
MluCI AATT 3 cut(s) 54, 95, 293
MlyI GAGTC 1 cut(s) 14
MnlI CCTC 1 cut(s) 73
MseI TTAA 1 cut(s) 102
MspR9I CCNGG 1 cut(s) 17
MunI CAATTG 1 cut(s) 293
MvaI CCWGG 1 cut(s) 17
NdeII GATC 4 cut(s) 73, 168, 196, 297
NlaIV GGNNCC 1 cut(s) 170
PasI CCCWGGG 1 cut(s) 16
PciSI GCTCTTC 1 cut(s) 126
PfeI GAWTC 1 cut(s) 83
PkrI GCNGC 1 cut(s) 151
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
PsiI TTATAA 1 cut(s) 246
Psp6I CCWGG 1 cut(s) 15
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 1 cut(s) 170
PsuI RGATCY 2 cut(s) 73, 168
SapI GCTCTTC 1 cut(s) 126
SaqAI TTAA 1 cut(s) 102
SatI GCNGC 1 cut(s) 150
Sau3AI GATC 4 cut(s) 73, 168, 196, 297
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 17
SetI ASST 2 cut(s) 216, 291
SfcI CTRYAG 1 cut(s) 271
Sse9I AATT 3 cut(s) 54, 95, 293
SspMI CTAG 1 cut(s) 89
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 1 cut(s) 131
TasI AATT 3 cut(s) 54, 95, 293
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TscAI CASTG 1 cut(s) 259
TseI GCWGC 1 cut(s) 149
TspRI CASTG 1 cut(s) 259
XbaI TCTAGA 1 cut(s) 88
XspI CTAG 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.