FvH4_2g12310

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0002885
Physical Location & Seq
Reverse (-)
10796931 .. 10808518
11588 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g12310.t4

Sequence Viewer

Length: 2424 bp
ATGCCCAGGAAGAGTAAAGCAAAGAAAGAAGAGATTTGCGAAGAGGTTTGCTTCCACTGCAAAGATGGGGGACTGCTCATGGTCTGCGACTACAAGAATTGCCTTAAAGCTTATCATCCTGAATGTGTGGAAAAAGACGAATCTTTTGTGGAGTCTGGGCAGCGCTGGAACTGCAAATGGCATTCTTGCTTCTTGTGCGATAAAGCTGCGAAATTTCAATGCTTTTGCTGCCCACAAGCTGTTTGCGGACGCTGCCTCTGTGACTCTGAGTTTGTGGTTCATAGAGTGGAAAGAGGATTTTGTAATCATTGTTTGAAGCTTGCAGTGCTCATTGAAGACAACTTGGATGTTGATTCTGACGGGGGCAGAGTTGACTTCAAAGATATAAATACATTCGAGTACTTATTTAAGGATTATTGGCAGATAATGAAAAAGAAAGAACGCTTGTCTGCAGAAGATGTCTACTCTGCAAAAACGTTTTTGAAGAAGGGAAAGAATTACACGTCTAACTTTGATTCGAATGTGATTCGTAAAAAAGAAGAAAAAATTTCAGAATCCGATGAAGAAAGTGACCCTCAGGTATCTGATTACGATGAAGTGGAAAGTGGAGAAGAATACATGCCAGTTACCAAAAAGAAGAGATCCAAGGGAAAACAGTGCTCAGTTAAAAGAAAAGTAGAAGCAAAGAAAAGAGAATTTATAGGATGGGGATCAAAGTCTCTCCTAGAATTCCTTGCTTCCATGGGTAAAGATACATCCACGGAGTTATCACAGTATGAAGTCACCTCTATAGTTACAGACTATTGTAAAGAAAACAAGCTTTTTGACCCAGAAAAGAAGAAGAAAGTAATTTGCGATGCAACCTTGCAGTCTCTTTTTGGACGGAAATCATTTTTTAAAAATAGTATATACAACCTTCTGACTTCCCATTTTGCTGACAATCTGGAAGAGTCAACGGAGGAGGATGAGAGTGGAAGTAGTTCCGAAGACAATGAGGAGAGCTTTATGGGTACCTGTAAAAGGCAGATCAAGTTGAGCCCTAAAGTACCAGATGTGCAGAAAAGCTGTTTTGCTTCCATTGTTCCTGAAAACATCAAGCTTGTGTACCTGAAGAGGACCTTAGTGGAGGAATTGTTAAAGCAACCGGAGACTTTTGGTGAGAAAGTAACAGGAAGTTTTGTGAGAGTTAAATGTGACCCAAATGATTATTCACTGAAGAACTCTCACCAGCTCTTGCAAATTAAAGGTATAAAGGAAAGTTTGAGGACAGACAGAGAGGATACAGAAATACTTTTGCAATGTTTCAGTACTCACAAAGATTTACCTGTTTCCAAGCTGTCAGATGATGACTTCTGTAAGGAAGAATGTGAAGATCTACAGCAGAGAATAAATAATGGCCTCCTTAAAAAGCCAACTATTGTGGAGTTTGAACAGAAGGCTAGAAGTCTACATGAGAATATAACAAAGCATTGGCTTGCAAGAGAATTGACTCTGTTGCAGAAGCGCATTGACCATGCAAATGAAAAAGGATGGAGGAGAGAGCTTGATGCATACATGACTAAGAAGCTGCTAATTGAAACACCATCAGAACAATCACGACTGTTAAATGAGATTCCGGAAGTAATTGCAGCCATAGAAAAATGTGATCCTATTTCTGAGTACTCCCCTAGCCAGGATAAACAAGGATATGATGGCTTTTCCGAATCAGCCCCCAGAGAATCTCCCCAAACTCCTGGCACTGCTCTAGCCAATGGAACCTCATGGCGCACAAATGACAGAACAGAGCTTGCAGGTTCACTGTTACACCAGGAGAGGGACCTGGAGGGTGCAGTAGCTAAACATAAGAGAAAGCAGGCTCCATCAAACTTTGAACAGAGCGCTAGTACAGATGGTTCACTGTTACACCAGGAGAGAGGCCTGGAGGGTGCAGCAGCTAAACATAAGAAGCAGCCTCCATCAGACTTTGAACGGAGCTTTAGTACAGATGGTTCAAAGGGCGACCATGAGAGAGACCTGGCGGATGCAAAGGATATACCTAAGAAGAAGGTTCCTACAATTAATAACTGCTCGCAGTCTCCTTGCATTCCATCTGGTCAGGCAGCAGAACTAGTGAAACCTGAAGTAGCTCGACTAGAAAGGATGAACTCTGATAGCACATCTGAAGGCAAGGTAACTGAGTTGAGCGATGACGATGAAGAGCTAAAGGTTTCAGTTACAGCACCTGCTGTTGAAATCCAAGGTTCTGATTCATGGTATTGTATGAGTCCACTTGGTGAAATAAGGGGACCCTATAAACTGTCATTGCTAAAGCTATGGAACGTCTCAAGCCGCAAGGAATTAAGATATAAGGTTTGGAGAGAGGGTCAGAGCAAAGGCAAGGCAATCTTTCTCAATGATGCTATTCAAGGAAATTTGCCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GYF Plus-3 SWIB

Protein Analysis

808

Amino Acids

91.81

Weight (kDa)

5.97

Isoelectric Point (pI)

51.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_NSD PF22908 16 - 61 6e-06 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger
SWIB PF02201 239 - 311 3.4e-13 SWIB/MDM2 domain
SWIB_eIF2D PF26291 240 - 294 5.3e-07 eIF2D, SWIB domain
Plus-3 PF03126 364 - 463 6.2e-17 Plus-3 domain
NERD_plant PF25980 486 - 534 9.2e-21 Plant NERD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2230
Acc36I ACCTGC 2 cut(s) 1781, 2230
Acc65I GGTACC 1 cut(s) 1010
AccB1I GGYRCC 1 cut(s) 1010
AccI GTMKAC 2 cut(s) 462, 1447
AccIII TCCGGA 1 cut(s) 1615
AciI CCGC 3 cut(s) 246, 2018, 2329
AclI AACGTT 1 cut(s) 476
AclWI GGATC 3 cut(s) 636, 718, 1640
AcsI RAATTY 5 cut(s) 212, 546, 695, 728, 2410
AcuI CTGAAG 4 cut(s) 1130, 1235, 2139, 2181
AdeI CACNNNGTG 1 cut(s) 2273
AfaI GTAC 8 cut(s) 401, 1012, 1047, 1106, 1309, 1661, 1885, 1981
AfeI AGCGCT 2 cut(s) 164, 1879
AfiI CCNNNNNNNGG 3 cut(s) 1020, 1672, 1813
AflIII ACRYGT 1 cut(s) 501
AhlI ACTAGT 1 cut(s) 2107
AjiI CACGTC 1 cut(s) 504
AjnI CCWGG 8 cut(s) 5, 1671, 1732, 1806, 1818, 1905, 1917, 2013
AjuI GAANNNNNNNTTGG 2 cut(s) 1192, 1224
Alw21I GWGCWC 2 cut(s) 330, 662
Alw26I GTCTC 6 cut(s) 723, 876, 1142, 2004, 2079, 2326
AlwI GGATC 3 cut(s) 636, 718, 1640
AlwNI CAGNNNCTG 1 cut(s) 2222
Aor13HI TCCGGA 1 cut(s) 1615
Aor51HI AGCGCT 2 cut(s) 164, 1879
AoxI GGCC 2 cut(s) 1396, 1915
ApoI RAATTY 5 cut(s) 212, 546, 695, 728, 2410
ArsI GACNNNNNNTTYG 4 cut(s) 128, 160, 254, 286
AseI ATTAAT 1 cut(s) 2058
Asp700I GAANNNNTTC 1 cut(s) 979
Asp718I GGTACC 1 cut(s) 1010
AspLEI GCGC 4 cut(s) 165, 1506, 1767, 1880
AspS9I GGNCC 3 cut(s) 1116, 1816, 2285
AsuHPI GGTGA 4 cut(s) 775, 1169, 1217, 2285
AsuII TTCGAA 1 cut(s) 518
AvaII GGWCC 3 cut(s) 1116, 1816, 2285
AxyI CCTNAGG 1 cut(s) 576
BanI GGYRCC 1 cut(s) 1010
BanII GRGCYC 1 cut(s) 1040
BbsI GAAGAC 2 cut(s) 342, 993
Bbv12I GWGCWC 2 cut(s) 330, 662
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BciT130I CCWGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
BciVI GTATCC 1 cut(s) 1273
BcoDI GTCTC 6 cut(s) 723, 876, 1142, 2004, 2079, 2326
BcuI ACTAGT 1 cut(s) 2107
BfaI CTAG 7 cut(s) 725, 1440, 1668, 1745, 1881, 2108, 2132
BfmI CTRYAG 3 cut(s) 450, 789, 1376
BfoI RGCGCY 2 cut(s) 166, 1881
BfuAI ACCTGC 2 cut(s) 1781, 2230
BfuI GTATCC 1 cut(s) 1273
BglII AGATCT 1 cut(s) 1372
BmcAI AGTACT 3 cut(s) 401, 1309, 1661
Bme1390I CCNGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
Bme18I GGWCC 3 cut(s) 1116, 1816, 2285
BmgBI CACGTC 1 cut(s) 504
BmgT120I GGNCC 3 cut(s) 1116, 1816, 2285
BmiI GGNNCC 7 cut(s) 1012, 1756, 1817, 1857, 2049, 2286, 2287
BmrFI CCNGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
BmsI GCATC 4 cut(s) 847, 1537, 2011, 2386
BpiI GAAGAC 2 cut(s) 342, 993
BpmI CTGGAG 2 cut(s) 1841, 1940
Bpu14I TTCGAA 1 cut(s) 518
BpuEI CTTGAG 1 cut(s) 2308
BsaBI GATNNNNATC 1 cut(s) 709
BsaI GGTCTC 1 cut(s) 2004
BsaJI CCNNGG 5 cut(s) 5, 645, 741, 759, 2236
BsaWI WCCGGW 2 cut(s) 1144, 1615
BsaXI ACNNNNNCTCC 6 cut(s) 1118, 1148, 1963, 1993, 2347, 2377
Bsc4I CCNNNNNNNGG 3 cut(s) 1020, 1672, 1813
Bse1I ACTGG 1 cut(s) 623
Bse21I CCTNAGG 1 cut(s) 576
Bse3DI GCAATG 2 cut(s) 1304, 2300
Bse8I GATNNNNATC 1 cut(s) 709
BseAI TCCGGA 1 cut(s) 1615
BseBI CCWGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
BseDI CCNNGG 5 cut(s) 5, 645, 741, 759, 2236
BseGI GGATG 8 cut(s) 115, 352, 710, 755, 970, 1535, 2026, 2145
BseJI GATNNNNATC 1 cut(s) 709
BseLI CCNNNNNNNGG 3 cut(s) 1020, 1672, 1813
BseMI GCAATG 2 cut(s) 1304, 2300
BseMII CTCAG 5 cut(s) 258, 590, 675, 1647, 2166
BseNI ACTGG 1 cut(s) 623
BseRI GAGGAG 3 cut(s) 974, 1010, 1549
BsgI GTGCAG 3 cut(s) 1076, 1848, 1947
BshFI GGCC 2 cut(s) 1398, 1917
BshNI GGYRCC 1 cut(s) 1010
BsiHKAI GWGCWC 2 cut(s) 330, 662
BsiSI CCGG 2 cut(s) 1145, 1616
BslFI GGGAC 3 cut(s) 84, 1829, 2298
BslI CCNNNNNNNGG 3 cut(s) 1020, 1672, 1813
BsmAI GTCTC 6 cut(s) 723, 876, 1142, 2004, 2079, 2326
BsmBI CGTCTC 1 cut(s) 2326
BsmFI GGGAC 3 cut(s) 84, 1829, 2298
BsmI GAATGC 2 cut(s) 181, 2082
BsnI GGCC 2 cut(s) 1398, 1917
Bso31I GGTCTC 1 cut(s) 2004
Bsp119I TTCGAA 1 cut(s) 518
Bsp1286I GDGCHC 3 cut(s) 330, 662, 1040
Bsp13I TCCGGA 1 cut(s) 1615
Bsp143I GATC 5 cut(s) 641, 710, 1026, 1372, 1645
Bsp19I CCATGG 1 cut(s) 741
BspACI CCGC 3 cut(s) 246, 2018, 2329
BspANI GGCC 2 cut(s) 1398, 1917
BspCNI CTCAG 5 cut(s) 259, 589, 674, 1648, 2167
BspEI TCCGGA 1 cut(s) 1615
BspLI GGNNCC 7 cut(s) 1012, 1756, 1817, 1857, 2049, 2286, 2287
BspMAI CTGCAG 1 cut(s) 454
BspMI ACCTGC 2 cut(s) 1781, 2230
BspPI GGATC 3 cut(s) 636, 718, 1640
BspQI GCTCTTC 1 cut(s) 2190
BspT104I TTCGAA 1 cut(s) 518
BspT107I GGYRCC 1 cut(s) 1010
BspTNI GGTCTC 1 cut(s) 2004
BsrDI GCAATG 2 cut(s) 1304, 2300
BsrI ACTGG 1 cut(s) 623
BssECI CCNNGG 5 cut(s) 5, 645, 741, 759, 2236
BssMI GATC 5 cut(s) 641, 710, 1026, 1372, 1645
BssT1I CCWWGG 3 cut(s) 645, 741, 2236
Bst2UI CCWGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
Bst4CI ACNGT 6 cut(s) 657, 774, 1602, 1800, 1899, 2298
Bst6I CTCTTC 7 cut(s) 5, 24, 36, 632, 942, 1106, 2190
BstBI TTCGAA 1 cut(s) 518
BstC8I GCNNGC 5 cut(s) 321, 1476, 1788, 1854, 2069
BstDEI CTNAG 8 cut(s) 267, 576, 661, 1120, 1560, 1656, 2037, 2175
BstDSI CCRYGG 2 cut(s) 741, 759
BstENI CCTNNNNNAGG 1 cut(s) 1018
BstF5I GGATG 8 cut(s) 115, 352, 710, 755, 970, 1535, 2026, 2145
BstH2I RGCGCY 2 cut(s) 166, 1881
BstHHI GCGC 4 cut(s) 165, 1506, 1767, 1880
BstKTI GATC 5 cut(s) 644, 713, 1029, 1375, 1648
BstMAI GTCTC 6 cut(s) 723, 876, 1142, 2004, 2079, 2326
BstMBI GATC 5 cut(s) 641, 710, 1026, 1372, 1645
BstMWI GCNNNNNNNGC 6 cut(s) 57, 171, 195, 228, 252, 325
BstNI CCWGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
BstNSI RCATGY 1 cut(s) 622
BstSCI CCNGG 8 cut(s) 5, 1671, 1732, 1806, 1818, 1905, 1917, 2013
BstSFI CTRYAG 3 cut(s) 450, 789, 1376
BstV2I GAAGAC 2 cut(s) 342, 993
BstX2I RGATCY 2 cut(s) 641, 1372
BstXI CCANNNNNNTGG 1 cut(s) 1733
BstYI RGATCY 2 cut(s) 641, 1372
Bsu36I CCTNAGG 1 cut(s) 576
BsuI GTATCC 1 cut(s) 1273
BsuRI GGCC 2 cut(s) 1398, 1917
BtgI CCRYGG 2 cut(s) 741, 759
BtgZI GCGATG 2 cut(s) 870, 2199
BtrI CACGTC 1 cut(s) 504
BtsCI GGATG 8 cut(s) 115, 352, 710, 755, 970, 1535, 2026, 2145
BtsI GCAGTG 3 cut(s) 55, 330, 1737
BtsIMutI CAGTG 7 cut(s) 55, 330, 662, 1211, 1737, 1796, 1895
BveI ACCTGC 2 cut(s) 1781, 2230
Cac8I GCNNGC 5 cut(s) 321, 1476, 1788, 1854, 2069
CaiI CAGNNNCTG 1 cut(s) 2222
CfoI GCGC 4 cut(s) 165, 1506, 1767, 1880
Cfr13I GGNCC 3 cut(s) 1116, 1816, 2285
CseI GACGC 1 cut(s) 258
Csp6I GTAC 8 cut(s) 400, 1011, 1046, 1105, 1308, 1660, 1884, 1980
CspCI CAANNNNNGTGG 2 cut(s) 1401, 1436
CviAII CATG 9 cut(s) 79, 619, 742, 1451, 1514, 1555, 1761, 2003, 2250
CviQI GTAC 8 cut(s) 400, 1011, 1046, 1105, 1308, 1660, 1884, 1980
DdeI CTNAG 8 cut(s) 267, 576, 661, 1120, 1560, 1656, 2037, 2175
DpnI GATC 5 cut(s) 643, 712, 1028, 1374, 1647
DpnII GATC 5 cut(s) 641, 710, 1026, 1372, 1645
DraI TTTAAA 1 cut(s) 898
DraIII CACNNNGTG 1 cut(s) 2273
Eam1104I CTCTTC 7 cut(s) 5, 24, 36, 632, 942, 1106, 2190
EarI CTCTTC 7 cut(s) 5, 24, 36, 632, 942, 1106, 2190
EciI GGCGGA 1 cut(s) 2033
Eco130I CCWWGG 3 cut(s) 645, 741, 2236
Eco147I AGGCCT 1 cut(s) 1917
Eco24I GRGCYC 1 cut(s) 1040
Eco31I GGTCTC 1 cut(s) 2004
Eco47I GGWCC 3 cut(s) 1116, 1816, 2285
Eco47III AGCGCT 2 cut(s) 164, 1879
Eco57I CTGAAG 4 cut(s) 1130, 1235, 2139, 2181
Eco81I CCTNAGG 1 cut(s) 576
EcoNI CCTNNNNNAGG 1 cut(s) 1018
EcoO109I RGGNCCY 3 cut(s) 1116, 1816, 2285
EcoRI GAATTC 1 cut(s) 728
EcoRII CCWGG 8 cut(s) 5, 1671, 1732, 1806, 1818, 1905, 1917, 2013
EcoT14I CCWWGG 3 cut(s) 645, 741, 2236
EcoT22I ATGCAT 1 cut(s) 1552
EcoT38I GRGCYC 1 cut(s) 1040
ErhI CCWWGG 3 cut(s) 645, 741, 2236
Esp3I CGTCTC 1 cut(s) 2326
FaeI CATG 9 cut(s) 82, 622, 745, 1454, 1517, 1558, 1764, 2006, 2253
FalI AAGNNNNNCTT 4 cut(s) 1103, 1135, 2369, 2401
FaqI GGGAC 3 cut(s) 84, 1829, 2298
FatI CATG 9 cut(s) 78, 618, 741, 1450, 1513, 1554, 1760, 2002, 2249
FblI GTMKAC 2 cut(s) 462, 1447
FokI GGATG 8 cut(s) 102, 359, 717, 742, 977, 1542, 2033, 2152
FriOI GRGCYC 1 cut(s) 1040
FspBI CTAG 7 cut(s) 725, 1440, 1668, 1745, 1881, 2108, 2132
GlaI GCGC 4 cut(s) 164, 1505, 1766, 1879
GsuI CTGGAG 2 cut(s) 1841, 1940
HaeII RGCGCY 2 cut(s) 166, 1881
HaeIII GGCC 2 cut(s) 1398, 1917
HapII CCGG 2 cut(s) 1145, 1616
HgaI GACGC 1 cut(s) 258
HhaI GCGC 4 cut(s) 165, 1506, 1767, 1880
Hin1II CATG 9 cut(s) 82, 622, 745, 1454, 1517, 1558, 1764, 2006, 2253
Hin6I GCGC 4 cut(s) 163, 1504, 1765, 1878
HinP1I GCGC 4 cut(s) 163, 1504, 1765, 1878
HincII GTYRAC 2 cut(s) 373, 954
HindII GTYRAC 2 cut(s) 373, 954
HindIII AAGCTT 4 cut(s) 108, 317, 818, 1097
HpaII CCGG 2 cut(s) 1145, 1616
HphI GGTGA 4 cut(s) 775, 1169, 1217, 2285
Hpy166II GTNNAC 8 cut(s) 373, 463, 954, 1105, 1448, 1796, 1895, 2267
Hpy188III TCNNGA 5 cut(s) 119, 944, 1085, 1596, 1616
Hpy8I GTNNAC 8 cut(s) 373, 463, 954, 1105, 1448, 1796, 1895, 2267
HpyAV CCTTC 5 cut(s) 481, 926, 1429, 2038, 2156
HpyCH4III ACNGT 6 cut(s) 657, 774, 1602, 1800, 1899, 2298
HpyCH4IV ACGT 3 cut(s) 476, 503, 2319
HpyF10VI GCNNNNNNNGC 6 cut(s) 57, 171, 195, 228, 252, 325
HpyF3I CTNAG 8 cut(s) 267, 576, 661, 1120, 1560, 1656, 2037, 2175
HpySE526I ACGT 3 cut(s) 476, 503, 2319
Hsp92II CATG 9 cut(s) 82, 622, 745, 1454, 1517, 1558, 1764, 2006, 2253
HspAI GCGC 4 cut(s) 163, 1504, 1765, 1878
KflI GGGWCCC 1 cut(s) 2285
Kpn2I TCCGGA 1 cut(s) 1615
KpnI GGTACC 1 cut(s) 1014
Kzo9I GATC 5 cut(s) 641, 710, 1026, 1372, 1645
LguI GCTCTTC 1 cut(s) 2190
LmnI GCTCC 2 cut(s) 1861, 1971
LweI GCATC 4 cut(s) 847, 1537, 2011, 2386
MaeI CTAG 7 cut(s) 725, 1440, 1668, 1745, 1881, 2108, 2132
MaeII ACGT 3 cut(s) 476, 503, 2319
MalI GATC 5 cut(s) 643, 712, 1028, 1374, 1647
MboI GATC 5 cut(s) 641, 710, 1026, 1372, 1645
MflI RGATCY 2 cut(s) 641, 1372
MhlI GDGCHC 3 cut(s) 330, 662, 1040
MlyI GAGTC 5 cut(s) 161, 257, 959, 1483, 2272
Mph1103I ATGCAT 1 cut(s) 1552
MroI TCCGGA 1 cut(s) 1615
MroXI GAANNNNTTC 1 cut(s) 979
MslI CAYNNNNRTG 1 cut(s) 1518
MspI CCGG 2 cut(s) 1145, 1616
MspR9I CCNGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
Mva1269I GAATGC 2 cut(s) 181, 2082
MvaI CCWGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
MwoI GCNNNNNNNGC 6 cut(s) 57, 171, 195, 228, 252, 325
NcoI CCATGG 1 cut(s) 741
NdeII GATC 5 cut(s) 641, 710, 1026, 1372, 1645
NlaIII CATG 9 cut(s) 82, 622, 745, 1454, 1517, 1558, 1764, 2006, 2253
NlaIV GGNNCC 7 cut(s) 1012, 1756, 1817, 1857, 2049, 2286, 2287
NmuCI GTSAC 4 cut(s) 260, 569, 781, 1193
NsiI ATGCAT 1 cut(s) 1552
NspI RCATGY 1 cut(s) 622
NspV TTCGAA 1 cut(s) 518
PaqCI CACCTGC 1 cut(s) 2230
PceI AGGCCT 1 cut(s) 1917
PciSI GCTCTTC 1 cut(s) 2190
PctI GAATGC 2 cut(s) 181, 2082
PdmI GAANNNNTTC 1 cut(s) 979
PfeI GAWTC 9 cut(s) 140, 353, 515, 526, 554, 1612, 1703, 1718, 2246
PleI GAGTC 5 cut(s) 160, 257, 958, 1483, 2271
PpsI GAGTC 5 cut(s) 160, 257, 958, 1483, 2271
PpuMI RGGWCCY 3 cut(s) 1116, 1816, 2285
PshBI ATTAAT 1 cut(s) 2058
Psp1406I AACGTT 1 cut(s) 476
Psp5II RGGWCCY 3 cut(s) 1116, 1816, 2285
Psp6I CCWGG 8 cut(s) 5, 1671, 1732, 1806, 1818, 1905, 1917, 2013
PspGI CCWGG 8 cut(s) 5, 1671, 1732, 1806, 1818, 1905, 1917, 2013
PspN4I GGNNCC 7 cut(s) 1012, 1756, 1817, 1857, 2049, 2286, 2287
PspPI GGNCC 3 cut(s) 1116, 1816, 2285
PspPPI RGGWCCY 3 cut(s) 1116, 1816, 2285
PsrI GAACNNNNNNTAC 4 cut(s) 1876, 1908, 1972, 2004
PstI CTGCAG 1 cut(s) 454
PstNI CAGNNNCTG 1 cut(s) 2222
PsuI RGATCY 2 cut(s) 641, 1372
RsaI GTAC 8 cut(s) 401, 1012, 1047, 1106, 1309, 1661, 1885, 1981
RsaNI GTAC 8 cut(s) 400, 1011, 1046, 1105, 1308, 1660, 1884, 1980
RseI CAYNNNNRTG 1 cut(s) 1518
SapI GCTCTTC 1 cut(s) 2190
Sau3AI GATC 5 cut(s) 641, 710, 1026, 1372, 1645
Sau96I GGNCC 3 cut(s) 1116, 1816, 2285
ScaI AGTACT 3 cut(s) 401, 1309, 1661
SchI GAGTC 5 cut(s) 161, 257, 959, 1483, 2272
ScrFI CCNGG 8 cut(s) 7, 1673, 1734, 1808, 1820, 1907, 1919, 2015
SduI GDGCHC 3 cut(s) 330, 662, 1040
SfaNI GCATC 4 cut(s) 847, 1537, 2011, 2386
SfcI CTRYAG 3 cut(s) 450, 789, 1376
SfuI TTCGAA 1 cut(s) 518
SinI GGWCC 3 cut(s) 1116, 1816, 2285
SmiMI CAYNNNNRTG 1 cut(s) 1518
SmlI CTYRAG 1 cut(s) 2323
SmoI CTYRAG 1 cut(s) 2323
SpeI ACTAGT 1 cut(s) 2107
SseBI AGGCCT 1 cut(s) 1917
SsiI CCGC 3 cut(s) 246, 2018, 2329
SspMI CTAG 7 cut(s) 725, 1440, 1668, 1745, 1881, 2108, 2132
StuI AGGCCT 1 cut(s) 1917
StyD4I CCNGG 8 cut(s) 5, 1671, 1732, 1806, 1818, 1905, 1917, 2013
StyI CCWWGG 3 cut(s) 645, 741, 2236
TaaI ACNGT 6 cut(s) 657, 774, 1602, 1800, 1899, 2298
TaiI ACGT 3 cut(s) 479, 506, 2322
TaqI TCGA 3 cut(s) 396, 518, 2128
TatI WGTACW 5 cut(s) 399, 1307, 1659, 1883, 1979
TauI GCSGC 1 cut(s) 2331
TfiI GAWTC 9 cut(s) 140, 353, 515, 526, 554, 1612, 1703, 1718, 2246
TscAI CASTG 7 cut(s) 62, 330, 662, 1218, 1744, 1803, 1902
TseFI GTSAC 4 cut(s) 260, 569, 781, 1193
Tsp45I GTSAC 4 cut(s) 260, 569, 781, 1193
TspDTI ATGAA 9 cut(s) 269, 443, 576, 609, 792, 1536, 2156, 2208, 2238
TspGWI ACGGA 4 cut(s) 776, 898, 971, 1984
TspRI CASTG 7 cut(s) 62, 330, 662, 1218, 1744, 1803, 1902
VpaK11BI GGWCC 3 cut(s) 1116, 1816, 2285
VspI ATTAAT 1 cut(s) 2058
XagI CCTNNNNNAGG 1 cut(s) 1018
XapI RAATTY 5 cut(s) 212, 546, 695, 728, 2410
XceI RCATGY 1 cut(s) 622
XcmI CCANNNNNNNNNTGG 1 cut(s) 62
XmiI GTMKAC 2 cut(s) 462, 1447
XmnI GAANNNNTTC 1 cut(s) 979
XspI CTAG 7 cut(s) 725, 1440, 1668, 1745, 1881, 2108, 2132
ZrmI AGTACT 3 cut(s) 401, 1309, 1661
Zsp2I ATGCAT 1 cut(s) 1552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.