zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63700 AT5G63700 |
| fragaria_vesca | FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 |
| malus_domestica | MD15G1440700.v1.1 |
| prunus_persica | Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 |
| pyrus_communis | pycom15g38850 |
| rosa_chinensis | RchiOBHm_Chr6g0272281 RchiOBHm_Chr6g0272291 |
| rosa_laevigata | RLG00000013684 RLG00000013685 |
| rosa_multiflora | Rmu_co8463891.1_g000001 Rmu_sc0004424.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00196450 |
| rosa_rugosa | Rorug06G0067400 |
| rosa_samantha | Rh6AG184100 Rh6BG187300 Rh6CG185600 Rh6DG177400 |
| rosa_wichuraiana | Rw6G015880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1346 |
| AarI | CACCTGC | 1 cut(s) | 2320 |
| Acc36I | ACCTGC | 4 cut(s) | 463, 1964, 2243, 2320 |
| Acc65I | GGTACC | 1 cut(s) | 1061 |
| AccB1I | GGYRCC | 1 cut(s) | 1061 |
| AccI | GTMKAC | 3 cut(s) | 513, 1525, 1721 |
| AccII | CGCG | 1 cut(s) | 1950 |
| AccIII | TCCGGA | 1 cut(s) | 1798 |
| AciI | CCGC | 4 cut(s) | 179, 297, 326, 2250 |
| AclWI | GGATC | 4 cut(s) | 687, 769, 1823, 1961 |
| AcsI | RAATTY | 8 cut(s) | 263, 596, 746, 779, 1270, 1326, 1395, 2500 |
| AcuI | CTGAAG | 2 cut(s) | 611, 1181 |
| AdeI | CACNNNGTG | 1 cut(s) | 2363 |
| AfaI | GTAC | 7 cut(s) | 378, 452, 1063, 1098, 1157, 1736, 1844 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1071, 1295 |
| AflIII | ACRYGT | 1 cut(s) | 508 |
| AgsI | TTSAA | 9 cut(s) | 269, 367, 430, 946, 1508, 1760, 2054, 2079, 2321 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 97 |
| AhlI | ACTAGT | 1 cut(s) | 2197 |
| AjnI | CCWGG | 5 cut(s) | 1590, 1854, 2001, 2100, 2326 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1243, 1275 |
| AleI | CACNNNNGTG | 1 cut(s) | 839 |
| Alw21I | GWGCWC | 1 cut(s) | 2063 |
| Alw26I | GTCTC | 8 cut(s) | 197, 774, 927, 1193, 1992, 2091, 2169, 2416 |
| AlwI | GGATC | 4 cut(s) | 687, 769, 1823, 1961 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1970, 2333 |
| Ama87I | CYCGRG | 1 cut(s) | 2413 |
| Aor13HI | TCCGGA | 1 cut(s) | 1798 |
| AoxI | GGCC | 2 cut(s) | 1300, 2374 |
| ApaI | GGGCCC | 1 cut(s) | 2378 |
| ApeKI | GCWGC | 7 cut(s) | 257, 303, 1750, 1811, 2012, 2015, 2189 |
| ApoI | RAATTY | 8 cut(s) | 263, 596, 746, 779, 1270, 1326, 1395, 2500 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 305, 337 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1030, 2521 |
| Asp718I | GGTACC | 1 cut(s) | 1061 |
| AspA2I | CCTAGG | 1 cut(s) | 1304 |
| AspLEI | GCGC | 4 cut(s) | 216, 1584, 1950, 1952 |
| AspS9I | GGNCC | 3 cut(s) | 1301, 2374, 2375 |
| AsuHPI | GGTGA | 6 cut(s) | 100, 826, 1268, 1708, 2096, 2375 |
| AvaI | CYCGRG | 1 cut(s) | 2413 |
| AvrII | CCTAGG | 1 cut(s) | 1304 |
| BaeGI | GKGCMC | 1 cut(s) | 2378 |
| BanI | GGYRCC | 1 cut(s) | 1061 |
| BanII | GRGCYC | 3 cut(s) | 1091, 2063, 2378 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 2506 |
| BbsI | GAAGAC | 3 cut(s) | 97, 1044, 1305 |
| Bbv12I | GWGCWC | 1 cut(s) | 2063 |
| BbvI | GCAGC | 7 cut(s) | 244, 290, 1737, 1823, 2024, 2027, 2201 |
| BccI | CCATC | 8 cut(s) | 62, 638, 750, 1602, 1868, 2066, 2185, 2397 |
| BceAI | ACGGC | 2 cut(s) | 227, 1796 |
| BciT130I | CCWGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| BciVI | GTATCC | 1 cut(s) | 1411 |
| BcoDI | GTCTC | 8 cut(s) | 197, 774, 927, 1193, 1992, 2091, 2169, 2416 |
| BcuI | ACTAGT | 1 cut(s) | 2197 |
| BfmI | CTRYAG | 2 cut(s) | 501, 1971 |
| BfoI | RGCGCY | 1 cut(s) | 217 |
| BfuAI | ACCTGC | 4 cut(s) | 463, 1964, 2243, 2320 |
| BfuI | GTATCC | 1 cut(s) | 1411 |
| BglII | AGATCT | 1 cut(s) | 2120 |
| BisI | GCNGC | 7 cut(s) | 258, 304, 1751, 1812, 2013, 2016, 2190 |
| BlnI | CCTAGG | 1 cut(s) | 1304 |
| BlsI | GCNGC | 7 cut(s) | 259, 305, 1752, 1813, 2014, 2017, 2191 |
| BmcAI | AGTACT | 2 cut(s) | 452, 1844 |
| Bme1390I | CCNGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 97 |
| BmeT110I | CYCGRG | 1 cut(s) | 2413 |
| BmgT120I | GGNCC | 3 cut(s) | 1301, 2374, 2375 |
| BmiI | GGNNCC | 6 cut(s) | 1063, 1797, 2205, 2375, 2376, 2377 |
| BmrFI | CCNGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| BmsI | GCATC | 5 cut(s) | 388, 898, 1720, 2098, 2476 |
| BpiI | GAAGAC | 3 cut(s) | 97, 1044, 1305 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 63, 95 |
| BpmI | CTGGAG | 3 cut(s) | 1383, 1831, 2024 |
| BpuEI | CTTGAG | 1 cut(s) | 1859 |
| BsaAI | YACGTR | 1 cut(s) | 553 |
| BsaBI | GATNNNNATC | 1 cut(s) | 760 |
| BsaI | GGTCTC | 2 cut(s) | 1992, 2091 |
| BsaJI | CCNNGG | 5 cut(s) | 5, 696, 810, 1304, 2326 |
| BsaWI | WCCGGW | 1 cut(s) | 1798 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1169, 1199, 2437, 2467 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1071, 1295 |
| Bse1I | ACTGG | 3 cut(s) | 674, 1366, 1553 |
| Bse3DI | GCAATG | 3 cut(s) | 358, 2390, 2428 |
| Bse8I | GATNNNNATC | 1 cut(s) | 760 |
| BseAI | TCCGGA | 1 cut(s) | 1798 |
| BseBI | CCWGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| BseDI | CCNNGG | 5 cut(s) | 5, 696, 810, 1304, 2326 |
| BseGI | GGATG | 9 cut(s) | 166, 403, 761, 806, 1021, 1229, 1613, 2235, 2246 |
| BseJI | GATNNNNATC | 1 cut(s) | 760 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1071, 1295 |
| BseMI | GCAATG | 3 cut(s) | 358, 2390, 2428 |
| BseMII | CTCAG | 2 cut(s) | 309, 1188 |
| BseNI | ACTGG | 3 cut(s) | 674, 1366, 1553 |
| BsePI | GCGCGC | 1 cut(s) | 1948 |
| BseRI | GAGGAG | 5 cut(s) | 59, 68, 1180, 1627, 1896 |
| BseSI | GKGCMC | 1 cut(s) | 2378 |
| BseXI | GCAGC | 7 cut(s) | 244, 290, 1737, 1823, 2024, 2027, 2201 |
| BseYI | CCCAGC | 1 cut(s) | 1916 |
| BsgI | GTGCAG | 5 cut(s) | 192, 732, 1127, 2031, 2298 |
| Bsh1236I | CGCG | 1 cut(s) | 1950 |
| BshFI | GGCC | 2 cut(s) | 1302, 2376 |
| BshNI | GGYRCC | 1 cut(s) | 1061 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2063 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2413 |
| BsiSI | CCGG | 1 cut(s) | 1799 |
| BslFI | GGGAC | 1 cut(s) | 2309 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1071, 1295 |
| BsmAI | GTCTC | 8 cut(s) | 197, 774, 927, 1193, 1992, 2091, 2169, 2416 |
| BsmBI | CGTCTC | 1 cut(s) | 2416 |
| BsmFI | GGGAC | 1 cut(s) | 2309 |
| BsmI | GAATGC | 2 cut(s) | 232, 2172 |
| BsnI | GGCC | 2 cut(s) | 1302, 2376 |
| Bso31I | GGTCTC | 2 cut(s) | 1992, 2091 |
| BsoBI | CYCGRG | 1 cut(s) | 2413 |
| Bsp120I | GGGCCC | 1 cut(s) | 2374 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1091, 2063, 2378 |
| Bsp13I | TCCGGA | 1 cut(s) | 1798 |
| Bsp143I | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| BspACI | CCGC | 4 cut(s) | 179, 297, 326, 2250 |
| BspANI | GGCC | 2 cut(s) | 1302, 2376 |
| BspCNI | CTCAG | 2 cut(s) | 310, 1189 |
| BspEI | TCCGGA | 1 cut(s) | 1798 |
| BspFNI | CGCG | 1 cut(s) | 1950 |
| BspHI | TCATGA | 2 cut(s) | 1686, 2149 |
| BspLI | GGNNCC | 6 cut(s) | 1063, 1797, 2205, 2375, 2376, 2377 |
| BspMAI | CTGCAG | 2 cut(s) | 505, 1975 |
| BspMI | ACCTGC | 4 cut(s) | 463, 1964, 2243, 2320 |
| BspPI | GGATC | 4 cut(s) | 687, 769, 1823, 1961 |
| BspQI | GCTCTTC | 1 cut(s) | 1885 |
| BspT107I | GGYRCC | 1 cut(s) | 1061 |
| BspTNI | GGTCTC | 2 cut(s) | 1992, 2091 |
| BsrDI | GCAATG | 3 cut(s) | 358, 2390, 2428 |
| BsrI | ACTGG | 3 cut(s) | 674, 1366, 1553 |
| BssECI | CCNNGG | 5 cut(s) | 5, 696, 810, 1304, 2326 |
| BssHII | GCGCGC | 1 cut(s) | 1948 |
| BssMI | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| BssNAI | GTATAC | 1 cut(s) | 1722 |
| BssT1I | CCWWGG | 3 cut(s) | 696, 810, 1304 |
| Bst1107I | GTATAC | 1 cut(s) | 1722 |
| Bst2UI | CCWGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| Bst4CI | ACNGT | 4 cut(s) | 708, 825, 857, 2237 |
| Bst6I | CTCTTC | 6 cut(s) | 5, 27, 683, 993, 1157, 1885 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 360 |
| BstBAI | YACGTR | 1 cut(s) | 553 |
| BstC8I | GCNNGC | 6 cut(s) | 372, 1554, 1680, 1950, 2037, 2159 |
| BstDEI | CTNAG | 3 cut(s) | 318, 1171, 1197 |
| BstEII | GGTNACC | 1 cut(s) | 2084 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1069 |
| BstF5I | GGATG | 9 cut(s) | 166, 403, 761, 806, 1021, 1229, 1613, 2235, 2246 |
| BstFNI | CGCG | 1 cut(s) | 1950 |
| BstH2I | RGCGCY | 1 cut(s) | 217 |
| BstHHI | GCGC | 4 cut(s) | 216, 1584, 1950, 1952 |
| BstKTI | GATC | 8 cut(s) | 625, 695, 764, 1080, 1831, 1969, 1990, 2123 |
| BstMAI | GTCTC | 8 cut(s) | 197, 774, 927, 1193, 1992, 2091, 2169, 2416 |
| BstMBI | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 60, 222, 246, 279, 303, 360, 1956 |
| BstNI | CCWGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| BstNSI | RCATGY | 3 cut(s) | 512, 673, 1682 |
| BstPI | GGTNACC | 1 cut(s) | 2084 |
| BstSCI | CCNGG | 5 cut(s) | 1590, 1854, 2001, 2100, 2326 |
| BstSFI | CTRYAG | 2 cut(s) | 501, 1971 |
| BstSLI | GKGCMC | 1 cut(s) | 2378 |
| BstUI | CGCG | 1 cut(s) | 1950 |
| BstV1I | GCAGC | 7 cut(s) | 244, 290, 1737, 1823, 2024, 2027, 2201 |
| BstV2I | GAAGAC | 3 cut(s) | 97, 1044, 1305 |
| BstX2I | RGATCY | 3 cut(s) | 692, 1966, 2120 |
| BstYI | RGATCY | 3 cut(s) | 692, 1966, 2120 |
| BstZ17I | GTATAC | 1 cut(s) | 1722 |
| BsuI | GTATCC | 1 cut(s) | 1411 |
| BsuRI | GGCC | 2 cut(s) | 1302, 2376 |
| BtgZI | GCGATG | 3 cut(s) | 921, 2289, 2416 |
| BtsCI | GGATG | 9 cut(s) | 166, 403, 761, 806, 1021, 1229, 1613, 2235, 2246 |
| BtsI | GCAGTG | 2 cut(s) | 720, 1920 |
| BtsIMutI | CAGTG | 4 cut(s) | 713, 720, 1546, 1920 |
| BveI | ACCTGC | 4 cut(s) | 463, 1964, 2243, 2320 |
| Cac8I | GCNNGC | 6 cut(s) | 372, 1554, 1680, 1950, 2037, 2159 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1970, 2333 |
| CciI | TCATGA | 2 cut(s) | 1686, 2149 |
| CfoI | GCGC | 4 cut(s) | 216, 1584, 1950, 1952 |
| Cfr13I | GGNCC | 3 cut(s) | 1301, 2374, 2375 |
| CseI | GACGC | 2 cut(s) | 309, 2398 |
| Csp6I | GTAC | 7 cut(s) | 377, 451, 1062, 1097, 1156, 1735, 1843 |
| CviQI | GTAC | 7 cut(s) | 377, 451, 1062, 1097, 1156, 1735, 1843 |
| DdeI | CTNAG | 3 cut(s) | 318, 1171, 1197 |
| DpnI | GATC | 8 cut(s) | 624, 694, 763, 1079, 1830, 1968, 1989, 2122 |
| DpnII | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| DraI | TTTAAA | 1 cut(s) | 1453 |
| DraIII | CACNNNGTG | 1 cut(s) | 2363 |
| DriI | GACNNNNNGTC | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 6 cut(s) | 5, 27, 683, 993, 1157, 1885 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 97 |
| EarI | CTCTTC | 6 cut(s) | 5, 27, 683, 993, 1157, 1885 |
| Ecl136II | GAGCTC | 1 cut(s) | 2061 |
| Eco130I | CCWWGG | 3 cut(s) | 696, 810, 1304 |
| Eco24I | GRGCYC | 3 cut(s) | 1091, 2063, 2378 |
| Eco31I | GGTCTC | 2 cut(s) | 1992, 2091 |
| Eco53kI | GAGCTC | 1 cut(s) | 2061 |
| Eco57I | CTGAAG | 2 cut(s) | 611, 1181 |
| Eco88I | CYCGRG | 1 cut(s) | 2413 |
| Eco91I | GGTNACC | 1 cut(s) | 2084 |
| EcoICRI | GAGCTC | 1 cut(s) | 2061 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1069 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1301, 2374, 2375 |
| EcoO65I | GGTNACC | 1 cut(s) | 2084 |
| EcoRI | GAATTC | 1 cut(s) | 779 |
| EcoRII | CCWGG | 5 cut(s) | 1590, 1854, 2001, 2100, 2326 |
| EcoT14I | CCWWGG | 3 cut(s) | 696, 810, 1304 |
| EcoT38I | GRGCYC | 3 cut(s) | 1091, 2063, 2378 |
| ErhI | CCWWGG | 3 cut(s) | 696, 810, 1304 |
| Esp3I | CGTCTC | 1 cut(s) | 2416 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 89, 121, 1154, 1186 |
| FaqI | GGGAC | 1 cut(s) | 2309 |
| FauI | CCCGC | 1 cut(s) | 172 |
| FblI | GTMKAC | 3 cut(s) | 513, 1525, 1721 |
| Fnu4HI | GCNGC | 7 cut(s) | 258, 304, 1751, 1812, 2013, 2016, 2190 |
| FokI | GGATG | 9 cut(s) | 153, 410, 768, 793, 1028, 1236, 1620, 2233, 2242 |
| FriOI | GRGCYC | 3 cut(s) | 1091, 2063, 2378 |
| Fsp4HI | GCNGC | 7 cut(s) | 258, 304, 1751, 1812, 2013, 2016, 2190 |
| GlaI | GCGC | 4 cut(s) | 215, 1583, 1949, 1951 |
| GluI | GCNGC | 7 cut(s) | 258, 304, 1751, 1812, 2013, 2016, 2190 |
| GsaI | CCCAGC | 1 cut(s) | 1920 |
| GsuI | CTGGAG | 3 cut(s) | 1383, 1831, 2024 |
| HaeII | RGCGCY | 1 cut(s) | 217 |
| HaeIII | GGCC | 2 cut(s) | 1302, 2376 |
| HapII | CCGG | 1 cut(s) | 1799 |
| HgaI | GACGC | 2 cut(s) | 309, 2398 |
| HhaI | GCGC | 4 cut(s) | 216, 1584, 1950, 1952 |
| Hin6I | GCGC | 4 cut(s) | 214, 1582, 1948, 1950 |
| HinP1I | GCGC | 4 cut(s) | 214, 1582, 1948, 1950 |
| HincII | GTYRAC | 2 cut(s) | 424, 1005 |
| HindII | GTYRAC | 2 cut(s) | 424, 1005 |
| HindIII | AAGCTT | 4 cut(s) | 159, 368, 869, 1148 |
| HpaII | CCGG | 1 cut(s) | 1799 |
| HphI | GGTGA | 6 cut(s) | 100, 826, 1268, 1708, 2096, 2375 |
| HpyAV | CCTTC | 8 cut(s) | 22, 121, 127, 133, 532, 977, 1507, 1635 |
| HpyCH4III | ACNGT | 4 cut(s) | 708, 825, 857, 2237 |
| HpyCH4IV | ACGT | 2 cut(s) | 552, 2023 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 60, 222, 246, 279, 303, 360, 1956 |
| HpyF3I | CTNAG | 3 cut(s) | 318, 1171, 1197 |
| HpySE526I | ACGT | 2 cut(s) | 552, 2023 |
| HspAI | GCGC | 4 cut(s) | 214, 1582, 1948, 1950 |
| Kpn2I | TCCGGA | 1 cut(s) | 1798 |
| KpnI | GGTACC | 1 cut(s) | 1065 |
| Kzo9I | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| LguI | GCTCTTC | 1 cut(s) | 1885 |
| LmnI | GCTCC | 3 cut(s) | 1167, 1501, 2406 |
| Lsp1109I | GCAGC | 7 cut(s) | 244, 290, 1737, 1823, 2024, 2027, 2201 |
| LweI | GCATC | 5 cut(s) | 388, 898, 1720, 2098, 2476 |
| MaeII | ACGT | 2 cut(s) | 552, 2023 |
| MaeIII | GTNAC | 7 cut(s) | 311, 557, 819, 832, 844, 1936, 2084 |
| MalI | GATC | 8 cut(s) | 624, 694, 763, 1079, 1830, 1968, 1989, 2122 |
| MboI | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| MflI | RGATCY | 3 cut(s) | 692, 1966, 2120 |
| MhlI | GDGCHC | 3 cut(s) | 1091, 2063, 2378 |
| MlyI | GAGTC | 7 cut(s) | 69, 185, 308, 1010, 1245, 1561, 2362 |
| MroI | TCCGGA | 1 cut(s) | 1798 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1030, 2521 |
| MslI | CAYNNNNRTG | 1 cut(s) | 839 |
| MspI | CCGG | 1 cut(s) | 1799 |
| MspR9I | CCNGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| Mva1269I | GAATGC | 2 cut(s) | 232, 2172 |
| MvaI | CCWGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| MvnI | CGCG | 1 cut(s) | 1950 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 60, 222, 246, 279, 303, 360, 1956 |
| NdeII | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| NlaIV | GGNNCC | 6 cut(s) | 1063, 1797, 2205, 2375, 2376, 2377 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| NmuCI | GTSAC | 5 cut(s) | 311, 557, 819, 832, 2084 |
| NspI | RCATGY | 3 cut(s) | 512, 673, 1682 |
| OliI | CACNNNNGTG | 1 cut(s) | 839 |
| PaeI | GCATGC | 1 cut(s) | 1682 |
| PaeR7I | CTCGAG | 1 cut(s) | 2413 |
| PagI | TCATGA | 2 cut(s) | 1686, 2149 |
| PaqCI | CACCTGC | 1 cut(s) | 2320 |
| PauI | GCGCGC | 1 cut(s) | 1948 |
| PciI | ACATGT | 1 cut(s) | 508 |
| PciSI | GCTCTTC | 1 cut(s) | 1885 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1730 |
| PctI | GAATGC | 2 cut(s) | 232, 2172 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1030, 2521 |
| PfeI | GAWTC | 6 cut(s) | 404, 566, 605, 1886, 1901, 2146 |
| PkrI | GCNGC | 7 cut(s) | 259, 305, 1752, 1813, 2014, 2017, 2191 |
| PleI | GAGTC | 7 cut(s) | 69, 185, 308, 1009, 1244, 1561, 2361 |
| PpsI | GAGTC | 7 cut(s) | 69, 185, 308, 1009, 1244, 1561, 2361 |
| Ppu21I | YACGTR | 1 cut(s) | 553 |
| PscI | ACATGT | 1 cut(s) | 508 |
| PsiI | TTATAA | 1 cut(s) | 1346 |
| Psp124BI | GAGCTC | 1 cut(s) | 2063 |
| Psp6I | CCWGG | 5 cut(s) | 1590, 1854, 2001, 2100, 2326 |
| PspEI | GGTNACC | 1 cut(s) | 2084 |
| PspFI | CCCAGC | 1 cut(s) | 1916 |
| PspGI | CCWGG | 5 cut(s) | 1590, 1854, 2001, 2100, 2326 |
| PspN4I | GGNNCC | 6 cut(s) | 1063, 1797, 2205, 2375, 2376, 2377 |
| PspOMI | GGGCCC | 1 cut(s) | 2374 |
| PspPI | GGNCC | 3 cut(s) | 1301, 2374, 2375 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2059, 2091 |
| PstI | CTGCAG | 2 cut(s) | 505, 1975 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1970, 2333 |
| PsuI | RGATCY | 3 cut(s) | 692, 1966, 2120 |
| PteI | GCGCGC | 1 cut(s) | 1948 |
| RsaI | GTAC | 7 cut(s) | 378, 452, 1063, 1098, 1157, 1736, 1844 |
| RsaNI | GTAC | 7 cut(s) | 377, 451, 1062, 1097, 1156, 1735, 1843 |
| RseI | CAYNNNNRTG | 1 cut(s) | 839 |
| SacI | GAGCTC | 1 cut(s) | 2063 |
| SapI | GCTCTTC | 1 cut(s) | 1885 |
| SatI | GCNGC | 7 cut(s) | 258, 304, 1751, 1812, 2013, 2016, 2190 |
| Sau3AI | GATC | 8 cut(s) | 622, 692, 761, 1077, 1828, 1966, 1987, 2120 |
| Sau96I | GGNCC | 3 cut(s) | 1301, 2374, 2375 |
| SbfI | CCTGCAGG | 1 cut(s) | 1975 |
| ScaI | AGTACT | 2 cut(s) | 452, 1844 |
| SchI | GAGTC | 7 cut(s) | 69, 185, 308, 1010, 1245, 1561, 2362 |
| ScrFI | CCNGG | 5 cut(s) | 1592, 1856, 2003, 2102, 2328 |
| SdaI | CCTGCAGG | 1 cut(s) | 1975 |
| SduI | GDGCHC | 3 cut(s) | 1091, 2063, 2378 |
| SfaNI | GCATC | 5 cut(s) | 388, 898, 1720, 2098, 2476 |
| SfcI | CTRYAG | 2 cut(s) | 501, 1971 |
| Sfr274I | CTCGAG | 1 cut(s) | 2413 |
| SlaI | CTCGAG | 1 cut(s) | 2413 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 839 |
| SmlI | CTYRAG | 2 cut(s) | 1838, 2413 |
| SmoI | CTYRAG | 2 cut(s) | 1838, 2413 |
| SpeI | ACTAGT | 1 cut(s) | 2197 |
| SphI | GCATGC | 1 cut(s) | 1682 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1975 |
| SsiI | CCGC | 4 cut(s) | 179, 297, 326, 2250 |
| SstI | GAGCTC | 1 cut(s) | 2063 |
| StyD4I | CCNGG | 5 cut(s) | 1590, 1854, 2001, 2100, 2326 |
| StyI | CCWWGG | 3 cut(s) | 696, 810, 1304 |
| TaaI | ACNGT | 4 cut(s) | 708, 825, 857, 2237 |
| TaiI | ACGT | 2 cut(s) | 555, 2026 |
| TaqI | TCGA | 4 cut(s) | 447, 569, 2218, 2414 |
| TatI | WGTACW | 3 cut(s) | 376, 450, 1842 |
| TfiI | GAWTC | 6 cut(s) | 404, 566, 605, 1886, 1901, 2146 |
| TscAI | CASTG | 4 cut(s) | 713, 720, 1553, 1927 |
| TseFI | GTSAC | 5 cut(s) | 311, 557, 819, 832, 2084 |
| TseI | GCWGC | 7 cut(s) | 257, 303, 1750, 1811, 2012, 2015, 2189 |
| Tsp45I | GTSAC | 5 cut(s) | 311, 557, 819, 832, 2084 |
| TspGWI | ACGGA | 2 cut(s) | 1022, 2511 |
| TspRI | CASTG | 4 cut(s) | 713, 720, 1553, 1927 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1069 |
| XapI | RAATTY | 8 cut(s) | 263, 596, 746, 779, 1270, 1326, 1395, 2500 |
| XceI | RCATGY | 3 cut(s) | 512, 673, 1682 |
| XhoI | CTCGAG | 1 cut(s) | 2413 |
| XmaJI | CCTAGG | 1 cut(s) | 1304 |
| XmiI | GTMKAC | 3 cut(s) | 513, 1525, 1721 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1030, 2521 |
| ZrmI | AGTACT | 2 cut(s) | 452, 1844 |