Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002885

Physical Location & Seq

Genomic Coordinates Reverse (-)

34644529 .. 34654668

Gene Structure 10140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG187300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGCCCAGGAAGAGTAAAGCAAAGAAGGAAGAGATTTGCGAGGAGGTTTGCTTCTATTGCAAAGATGGAGGACTCCTCTTGGTCTGCGACTACAAGGGTTGTCTTAAAGCTTATCATCCTGAATGTGTGGGAAAAGATGACTCTTTTGTGGAGACTGCACGGCGCTGGAACTGCAAATGGCATTCTTGCTTCATGTGCCATAAGGCTGCAAAGTTTCAATGCTTTTGCTGCCCACAAGCTGTATGCGGACGATGCCTCTGTGACTCTGAGTTTGCGGTTATTAAAGTGGATAGAGGATTTTGCAATCATTGCTTGAAGCTTGCTGTACTCATAGAAGAAAACTTGGATGTTGATTCTGACGGGGGCAGGGTTGACTTCAAAGATATAAGCACATTCGAGTACTTATTTAAGGAGTATTGGCAGGTAACGAAAAAGAAAGAACGCTTGTCTGCAGAACATGTCTACTCTGCGAAAAAGTTATTAAAGAAGGGAAAGAATTACTTGCGTGACTTTGATTCGAGTATAATTTATAAGAAAGAAGAAAAATTTTCAGAATCCGATGAAGAAAGTGACCTTCAGGTGTCTGATTATGATGGAGTGGAAAGTGGAGAAGAATACATGCCAGTTGCCAAAAAGAAGAGATCCAAGGGAAAACAGTGTGCAGTGAAAAGAAAAGTAGAAGCAGAGAAACGAGAATTTATGGGATGGGGATCAAAGTCTCTCCTAGAATTCCTTGCTTCTATGGGTAAAGATACATCCAAGGAGTTGTCACAGTATGAAGTCACCTCTGTGGTTACAGACTATTGTAAAGAAAACAAGCTTTTTGACCCAGAAAAGAAGAAGAAAGTAATTTGTGATCCAACCTTGCAGTCTCTTTTAGGGAGGAAAACATTGAATAAAAATAGTATATATAACCTTCTGACTTCCCATTTTGCTGACAATATGGAAGAGTCAACGGAGGGGGATGAGAGTGGAAGTAGTTCCGAAGACAAAGATGAGAGTTTTATGGGTACCTGTAAAAGGCAGATCAAGTTGAGCCCTAAAGTACCAGATGTGCAGAAAAGCTGTTTTGCTTCCATAGTTCCTGAAAACATCAAGCTTGTGTACCTGAAGAGGAGCTTAGTGGAGGAATTGTTAAAGCAACCTGAGACTTTTGGTGAGAAAGTAACAGGATGTTTTGTGAGAGTGAAATCTGACCCAAATGATTATTCACAGAAAAATTCTCACCAGCTCTTGCAAATTAAAGGTATAAAGGAAATTTTGAGGAATGGCAGAGAGGATACAGAAATACTTTTGCAATTTTTCAGTAATTTTACAGATTTACCTGTTTCCAAGCTGTCAGATGATGACTTCTGTAAGGAAGAATGTGAAGATTTGCATCAGAGAGTGAAAGATGGCCTCCTTAAAAAGCCAACTATTGTGGAGCTTGAACAGAAGGCTAGAAGTCTACATGAGAATATAACAAAGCACTGGCTTGCAAGAGAACTGACTCTGTTGCAGAAGCGCATTGACCTGGCAAATGAAAAAGGATGGAGGAGAGAGCTTGATGCGTACATGAATAAGAAGCTGCTACTTGAAACACCATCAGAACAATCACGGCTGTTAAATGAGGTTCCGGAAGTAATTGCAGCCATAGAAAAATGTGATCCTGTTCTTGAGTACTCCAGAAGCCAGGATAAACAAGGAAATGATGGCTCTTCCGAATCTGCCCCCAGAGAATCTCCTCAAACTCCCGGCACTGCTCTAGCCAATGAAACCTCATGGCGTGCAAATGGCAGAACAGATCCTGCAGGTTCACAGCTAGACCAGGAGACAGACCTGGAGGGTGCACCAGCTAAACGTAAGAGAAAGCAGGCTTCATCAAACTTTGAACAGAGCTCTAGTATAGATGGTTCAAATGGTGACCATGAGAGAGACCTGGAAGATGCAAAGGATAGATCTAGGAGAAAGAAAGTTCCTACGATTCATGACTGCAAGCAGTCTCCTTGCATTCCATCTGGTGAGGCAGCAGAACTAGTGGAACCTAAAGTAGCTCGACTAGAAAGGATGAACTGTGAAAGCACATCTGAAGTTAAGGTAATTGAGTTGAGCGATGACGATGAAGATGTAATGGTTTCAGTTAAAACACCTGCACTTGAAGTCCCAGGTTCTGATTTATGGTATTGTATGAGTCCACTTGGTGAAATGAGGGGCCCCTATAAATTGTCATTGCTAAAGCTATGGAGCGTCTCAAGTGGCAATGAATTAAGATACAAGGTTTGGAGAGTGGGTCAAAGCAAAGAGGAGGCAATCTTTCTCAATGATGCCATTCACGGAAATTTTCCACCATGTAGAAATGCTTCCAAATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GYF Plus-3 SWIB

Protein Analysis

783

Amino Acids

89.07

Weight (kDa)

6.07

Isoelectric Point (pI)

54.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIB	PF02201	239 - 311	2.5e-12	SWIB/MDM2 domain
SWIB_eIF2D	PF26291	240 - 296	5.6e-08	eIF2D, SWIB domain
Plus-3	PF03126	364 - 463	3.1e-17	Plus-3 domain
NERD_plant	PF25980	486 - 534	1.2e-21	Plant NERD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002885)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63700 AT5G63700
fragaria_vesca	FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 FvH4_2g12310 FvH4_2g12310
malus_domestica	MD15G1440700.v1.1
prunus_persica	Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1 Prupe.1G582800_v2.0.a1
pyrus_communis	pycom15g38850
rosa_chinensis	RchiOBHm_Chr6g0272281 RchiOBHm_Chr6g0272291
rosa_laevigata	RLG00000013684 RLG00000013685
rosa_multiflora	Rmu_co8463891.1_g000001 Rmu_sc0004424.1_g000005
rosa_roxburghii	Rroxscaffold_7G00196450
rosa_rugosa	Rorug06G0067400
rosa_samantha	Rh6AG184100 Rh6BG187300 Rh6CG185600 Rh6DG177400
rosa_wichuraiana	Rw6G015880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	531
AarI	CACCTGC	1 cut(s)	2137
Acc36I	ACCTGC	3 cut(s)	412, 1781, 2137
Acc65I	GGTACC	1 cut(s)	1010
AccB1I	GGYRCC	1 cut(s)	1010
AccI	GTMKAC	2 cut(s)	462, 1447
AccIII	TCCGGA	1 cut(s)	1615
AciI	CCGC	2 cut(s)	246, 275
AclWI	GGATC	5 cut(s)	636, 718, 851, 1640, 1778
AcsI	RAATTY	6 cut(s)	545, 695, 728, 1219, 1257, 2317
AcuI	CTGAAG	3 cut(s)	560, 1130, 2088
AdeI	CACNNNGTG	1 cut(s)	2180
AfaI	GTAC	7 cut(s)	327, 401, 1012, 1047, 1106, 1553, 1661
AfiI	CCNNNNNNNGG	1 cut(s)	1020
AflIII	ACRYGT	1 cut(s)	457
AgsI	TTSAA	9 cut(s)	218, 316, 379, 895, 1430, 1577, 1871, 1896, 2138
AhlI	ACTAGT	1 cut(s)	2014
AjnI	CCWGG	7 cut(s)	5, 1512, 1671, 1806, 1818, 1917, 2143
AjuI	GAANNNNNNNTTGG	2 cut(s)	1192, 1224
AleI	CACNNNNGTG	1 cut(s)	788
Alw21I	GWGCWC	2 cut(s)	1831, 1880
Alw26I	GTCTC	8 cut(s)	146, 723, 876, 1142, 1805, 1908, 1986, 2233
Alw44I	GTGCAC	1 cut(s)	1827
AlwI	GGATC	5 cut(s)	636, 718, 851, 1640, 1778
AlwNI	CAGNNNCTG	2 cut(s)	1787, 2150
Aor13HI	TCCGGA	1 cut(s)	1615
AoxI	GGCC	2 cut(s)	1396, 2191
ApaI	GGGCCC	1 cut(s)	2195
ApaLI	GTGCAC	1 cut(s)	1827
ApeKI	GCWGC	5 cut(s)	206, 228, 1567, 1628, 2006
ApoI	RAATTY	6 cut(s)	545, 695, 728, 1219, 1257, 2317
ArsI	GACNNNNNNTTYG	2 cut(s)	254, 286
Asp700I	GAANNNNTTC	2 cut(s)	979, 2338
Asp718I	GGTACC	1 cut(s)	1010
AspLEI	GCGC	2 cut(s)	165, 1506
AspS9I	GGNCC	2 cut(s)	2191, 2192
AsuC2I	CCSGG	1 cut(s)	1734
AsuHPI	GGTGA	6 cut(s)	775, 1169, 1217, 1913, 2012, 2192
BaeGI	GKGCMC	2 cut(s)	1831, 2195
BanI	GGYRCC	1 cut(s)	1010
BanII	GRGCYC	3 cut(s)	1040, 1880, 2195
BarI	GAAGNNNNNNTAC	1 cut(s)	2323
BbsI	GAAGAC	1 cut(s)	993
Bbv12I	GWGCWC	2 cut(s)	1831, 1880
BbvI	GCAGC	5 cut(s)	193, 215, 1554, 1640, 2018
BccI	CCATC	9 cut(s)	59, 587, 699, 1388, 1524, 1591, 1685, 1883, 2002
BceAI	ACGGC	2 cut(s)	176, 1613
BciT130I	CCWGG	7 cut(s)	7, 1514, 1673, 1808, 1820, 1919, 2145
BciVI	GTATCC	1 cut(s)	1273
BcnI	CCSGG	1 cut(s)	1734
BcoDI	GTCTC	8 cut(s)	146, 723, 876, 1142, 1805, 1908, 1986, 2233
BcuI	ACTAGT	1 cut(s)	2014
BfaI	CTAG	8 cut(s)	725, 1440, 1745, 1802, 1881, 1941, 2015, 2039
BfmI	CTRYAG	2 cut(s)	450, 1788
BfoI	RGCGCY	1 cut(s)	166
BfuAI	ACCTGC	3 cut(s)	412, 1781, 2137
BfuI	GTATCC	1 cut(s)	1273
BglII	AGATCT	1 cut(s)	1937
BisI	GCNGC	5 cut(s)	207, 229, 1568, 1629, 2007
BlsI	GCNGC	5 cut(s)	208, 230, 1569, 1630, 2008
BmcAI	AGTACT	2 cut(s)	401, 1661
Bme1390I	CCNGG	8 cut(s)	7, 1514, 1673, 1734, 1808, 1820, 1919, 2145
BmgT120I	GGNCC	2 cut(s)	2191, 2192
BmiI	GGNNCC	6 cut(s)	1012, 1614, 2022, 2192, 2193, 2194
BmrFI	CCNGG	8 cut(s)	7, 1514, 1673, 1734, 1808, 1820, 1919, 2145
BmsI	GCATC	5 cut(s)	242, 1387, 1537, 1915, 2293
BpiI	GAAGAC	1 cut(s)	993
BplI	GAGNNNNNCTC	2 cut(s)	60, 92
BpmI	CTGGAG	2 cut(s)	1648, 1841
BpuEI	CTTGAG	2 cut(s)	1676, 2215
BpuMI	CCSGG	1 cut(s)	1734
BsaBI	GATNNNNATC	2 cut(s)	709, 1377
BsaI	GGTCTC	1 cut(s)	1908
BsaJI	CCNNGG	4 cut(s)	5, 645, 759, 2143
BsaWI	WCCGGW	1 cut(s)	1615
BsaXI	ACNNNNNCTCC	4 cut(s)	1118, 1148, 2254, 2284
Bsc4I	CCNNNNNNNGG	1 cut(s)	1020
Bse1I	ACTGG	2 cut(s)	623, 1475
Bse3DI	GCAATG	3 cut(s)	307, 2207, 2245
Bse8I	GATNNNNATC	2 cut(s)	709, 1377
BseAI	TCCGGA	1 cut(s)	1615
BseBI	CCWGG	7 cut(s)	7, 1514, 1673, 1808, 1820, 1919, 2145
BseDI	CCNNGG	4 cut(s)	5, 645, 759, 2143
BseGI	GGATG	8 cut(s)	115, 352, 710, 755, 970, 1178, 1535, 2052
BseJI	GATNNNNATC	2 cut(s)	709, 1377
BseLI	CCNNNNNNNGG	1 cut(s)	1020
BseMI	GCAATG	3 cut(s)	307, 2207, 2245
BseMII	CTCAG	2 cut(s)	258, 1137
BseNI	ACTGG	2 cut(s)	623, 1475
BseRI	GAGGAG	6 cut(s)	56, 65, 1129, 1549, 1713, 2297
BseSI	GKGCMC	2 cut(s)	1831, 2195
BseXI	GCAGC	5 cut(s)	193, 215, 1554, 1640, 2018
BsgI	GTGCAG	4 cut(s)	141, 681, 1076, 2115
BshFI	GGCC	2 cut(s)	1398, 2193
BshNI	GGYRCC	1 cut(s)	1010
BsiHKAI	GWGCWC	2 cut(s)	1831, 1880
BsiSI	CCGG	2 cut(s)	1616, 1734
BslFI	GGGAC	1 cut(s)	2126
BslI	CCNNNNNNNGG	1 cut(s)	1020
BsmAI	GTCTC	8 cut(s)	146, 723, 876, 1142, 1805, 1908, 1986, 2233
BsmBI	CGTCTC	1 cut(s)	2233
BsmFI	GGGAC	1 cut(s)	2126
BsmI	GAATGC	2 cut(s)	181, 1989
BsnI	GGCC	2 cut(s)	1398, 2193
Bso31I	GGTCTC	1 cut(s)	1908
Bsp120I	GGGCCC	1 cut(s)	2191
Bsp1286I	GDGCHC	4 cut(s)	1040, 1831, 1880, 2195
Bsp13I	TCCGGA	1 cut(s)	1615
Bsp143I	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
BspACI	CCGC	2 cut(s)	246, 275
BspANI	GGCC	2 cut(s)	1398, 2193
BspCNI	CTCAG	2 cut(s)	259, 1138
BspEI	TCCGGA	1 cut(s)	1615
BspHI	TCATGA	1 cut(s)	1966
BspLI	GGNNCC	6 cut(s)	1012, 1614, 2022, 2192, 2193, 2194
BspMAI	CTGCAG	2 cut(s)	454, 1792
BspMI	ACCTGC	3 cut(s)	412, 1781, 2137
BspPI	GGATC	5 cut(s)	636, 718, 851, 1640, 1778
BspQI	GCTCTTC	1 cut(s)	1702
BspT107I	GGYRCC	1 cut(s)	1010
BspTNI	GGTCTC	1 cut(s)	1908
BsrDI	GCAATG	3 cut(s)	307, 2207, 2245
BsrI	ACTGG	2 cut(s)	623, 1475
BssECI	CCNNGG	4 cut(s)	5, 645, 759, 2143
BssMI	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
BssT1I	CCWWGG	2 cut(s)	645, 759
Bst2UI	CCWGG	7 cut(s)	7, 1514, 1673, 1808, 1820, 1919, 2145
Bst4CI	ACNGT	3 cut(s)	657, 774, 2054
Bst6I	CTCTTC	6 cut(s)	5, 24, 632, 942, 1106, 1702
BstAPI	GCANNNNNTGC	1 cut(s)	309
BstC8I	GCNNGC	5 cut(s)	321, 1476, 1767, 1854, 1976
BstDEI	CTNAG	3 cut(s)	267, 1120, 1146
BstEII	GGTNACC	1 cut(s)	1901
BstENI	CCTNNNNNAGG	1 cut(s)	1018
BstF5I	GGATG	8 cut(s)	115, 352, 710, 755, 970, 1178, 1535, 2052
BstH2I	RGCGCY	1 cut(s)	166
BstHHI	GCGC	2 cut(s)	165, 1506
BstKTI	GATC	7 cut(s)	644, 713, 859, 1029, 1648, 1786, 1940
BstMAI	GTCTC	8 cut(s)	146, 723, 876, 1142, 1805, 1908, 1986, 2233
BstMBI	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
BstMWI	GCNNNNNNNGC	6 cut(s)	57, 171, 195, 228, 252, 309
BstNI	CCWGG	7 cut(s)	7, 1514, 1673, 1808, 1820, 1919, 2145
BstNSI	RCATGY	2 cut(s)	461, 622
BstPI	GGTNACC	1 cut(s)	1901
BstSCI	CCNGG	8 cut(s)	5, 1512, 1671, 1732, 1806, 1818, 1917, 2143
BstSFI	CTRYAG	2 cut(s)	450, 1788
BstSLI	GKGCMC	2 cut(s)	1831, 2195
BstV1I	GCAGC	5 cut(s)	193, 215, 1554, 1640, 2018
BstV2I	GAAGAC	1 cut(s)	993
BstX2I	RGATCY	3 cut(s)	641, 1783, 1937
BstYI	RGATCY	3 cut(s)	641, 1783, 1937
BsuI	GTATCC	1 cut(s)	1273
BsuRI	GGCC	2 cut(s)	1398, 2193
BtgZI	GCGATG	1 cut(s)	2106
BtsCI	GGATG	8 cut(s)	115, 352, 710, 755, 970, 1178, 1535, 2052
BtsI	GCAGTG	2 cut(s)	669, 1737
BtsIMutI	CAGTG	4 cut(s)	662, 669, 1468, 1737
BveI	ACCTGC	3 cut(s)	412, 1781, 2137
Cac8I	GCNNGC	5 cut(s)	321, 1476, 1767, 1854, 1976
CaiI	CAGNNNCTG	2 cut(s)	1787, 2150
CciI	TCATGA	1 cut(s)	1966
CfoI	GCGC	2 cut(s)	165, 1506
Cfr13I	GGNCC	2 cut(s)	2191, 2192
CseI	GACGC	1 cut(s)	2215
Csp6I	GTAC	7 cut(s)	326, 400, 1011, 1046, 1105, 1552, 1660
CspCI	CAANNNNNGTGG	2 cut(s)	1401, 1436
CviAII	CATG	9 cut(s)	193, 458, 619, 1451, 1555, 1761, 1907, 1967, 2328
CviQI	GTAC	7 cut(s)	326, 400, 1011, 1046, 1105, 1552, 1660
DdeI	CTNAG	3 cut(s)	267, 1120, 1146
DpnI	GATC	7 cut(s)	643, 712, 858, 1028, 1647, 1785, 1939
DpnII	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
DraIII	CACNNNGTG	1 cut(s)	2180
Eam1104I	CTCTTC	6 cut(s)	5, 24, 632, 942, 1106, 1702
EarI	CTCTTC	6 cut(s)	5, 24, 632, 942, 1106, 1702
Ecl136II	GAGCTC	1 cut(s)	1878
Eco130I	CCWWGG	2 cut(s)	645, 759
Eco24I	GRGCYC	3 cut(s)	1040, 1880, 2195
Eco31I	GGTCTC	1 cut(s)	1908
Eco53kI	GAGCTC	1 cut(s)	1878
Eco57I	CTGAAG	3 cut(s)	560, 1130, 2088
Eco91I	GGTNACC	1 cut(s)	1901
EcoICRI	GAGCTC	1 cut(s)	1878
EcoNI	CCTNNNNNAGG	1 cut(s)	1018
EcoO109I	RGGNCCY	2 cut(s)	2191, 2192
EcoO65I	GGTNACC	1 cut(s)	1901
EcoRI	GAATTC	1 cut(s)	728
EcoRII	CCWGG	7 cut(s)	5, 1512, 1671, 1806, 1818, 1917, 2143
EcoT14I	CCWWGG	2 cut(s)	645, 759
EcoT38I	GRGCYC	3 cut(s)	1040, 1880, 2195
ErhI	CCWWGG	2 cut(s)	645, 759
Esp3I	CGTCTC	1 cut(s)	2233
FaeI	CATG	9 cut(s)	196, 461, 622, 1454, 1558, 1764, 1910, 1970, 2331
FalI	AAGNNNNNCTT	4 cut(s)	485, 517, 1103, 1135
FaqI	GGGAC	1 cut(s)	2126
FatI	CATG	9 cut(s)	192, 457, 618, 1450, 1554, 1760, 1906, 1966, 2327
FblI	GTMKAC	2 cut(s)	462, 1447
Fnu4HI	GCNGC	5 cut(s)	207, 229, 1568, 1629, 2007
FokI	GGATG	8 cut(s)	102, 359, 717, 742, 977, 1185, 1542, 2059
FriOI	GRGCYC	3 cut(s)	1040, 1880, 2195
Fsp4HI	GCNGC	5 cut(s)	207, 229, 1568, 1629, 2007
FspBI	CTAG	8 cut(s)	725, 1440, 1745, 1802, 1881, 1941, 2015, 2039
GlaI	GCGC	2 cut(s)	164, 1505
GluI	GCNGC	5 cut(s)	207, 229, 1568, 1629, 2007
GsuI	CTGGAG	2 cut(s)	1648, 1841
HaeII	RGCGCY	1 cut(s)	166
HaeIII	GGCC	2 cut(s)	1398, 2193
HapII	CCGG	2 cut(s)	1616, 1734
HgaI	GACGC	1 cut(s)	2215
HhaI	GCGC	2 cut(s)	165, 1506
Hin1II	CATG	9 cut(s)	196, 461, 622, 1454, 1558, 1764, 1910, 1970, 2331
Hin6I	GCGC	2 cut(s)	163, 1504
HinP1I	GCGC	2 cut(s)	163, 1504
HincII	GTYRAC	2 cut(s)	373, 954
HindII	GTYRAC	2 cut(s)	373, 954
HindIII	AAGCTT	4 cut(s)	108, 317, 818, 1097
HpaII	CCGG	2 cut(s)	1616, 1734
HphI	GGTGA	6 cut(s)	775, 1169, 1217, 1913, 2012, 2192
Hpy166II	GTNNAC	8 cut(s)	373, 463, 954, 1105, 1448, 1796, 1829, 2174
Hpy188III	TCNNGA	6 cut(s)	119, 1085, 1616, 1655, 1665, 1967
Hpy8I	GTNNAC	8 cut(s)	373, 463, 954, 1105, 1448, 1796, 1829, 2174
HpyAV	CCTTC	5 cut(s)	19, 481, 584, 926, 1429
HpyCH4III	ACNGT	3 cut(s)	657, 774, 2054
HpyCH4IV	ACGT	1 cut(s)	1840
HpyF10VI	GCNNNNNNNGC	6 cut(s)	57, 171, 195, 228, 252, 309
HpyF3I	CTNAG	3 cut(s)	267, 1120, 1146
HpySE526I	ACGT	1 cut(s)	1840
Hsp92II	CATG	9 cut(s)	196, 461, 622, 1454, 1558, 1764, 1910, 1970, 2331
HspAI	GCGC	2 cut(s)	163, 1504
Kpn2I	TCCGGA	1 cut(s)	1615
KpnI	GGTACC	1 cut(s)	1014
Kzo9I	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
LguI	GCTCTTC	1 cut(s)	1702
LmnI	GCTCC	3 cut(s)	1116, 1423, 2223
Lsp1109I	GCAGC	5 cut(s)	193, 215, 1554, 1640, 2018
LweI	GCATC	5 cut(s)	242, 1387, 1537, 1915, 2293
MaeI	CTAG	8 cut(s)	725, 1440, 1745, 1802, 1881, 1941, 2015, 2039
MaeII	ACGT	1 cut(s)	1840
MaeIII	GTNAC	9 cut(s)	260, 424, 506, 569, 768, 781, 793, 1165, 1901
MalI	GATC	7 cut(s)	643, 712, 858, 1028, 1647, 1785, 1939
MboI	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
MflI	RGATCY	3 cut(s)	641, 1783, 1937
MhlI	GDGCHC	4 cut(s)	1040, 1831, 1880, 2195
MlyI	GAGTC	6 cut(s)	66, 134, 257, 959, 1483, 2179
MmeI	TCCRAC	1 cut(s)	884
MroI	TCCGGA	1 cut(s)	1615
MroXI	GAANNNNTTC	2 cut(s)	979, 2338
MslI	CAYNNNNRTG	1 cut(s)	788
MspI	CCGG	2 cut(s)	1616, 1734
MspR9I	CCNGG	8 cut(s)	7, 1514, 1673, 1734, 1808, 1820, 1919, 2145
Mva1269I	GAATGC	2 cut(s)	181, 1989
MvaI	CCWGG	7 cut(s)	7, 1514, 1673, 1808, 1820, 1919, 2145
MwoI	GCNNNNNNNGC	6 cut(s)	57, 171, 195, 228, 252, 309
NciI	CCSGG	1 cut(s)	1734
NdeII	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
NlaIII	CATG	9 cut(s)	196, 461, 622, 1454, 1558, 1764, 1910, 1970, 2331
NlaIV	GGNNCC	6 cut(s)	1012, 1614, 2022, 2192, 2193, 2194
NmuCI	GTSAC	6 cut(s)	260, 506, 569, 768, 781, 1901
NspI	RCATGY	2 cut(s)	461, 622
OliI	CACNNNNGTG	1 cut(s)	788
PagI	TCATGA	1 cut(s)	1966
PaqCI	CACCTGC	1 cut(s)	2137
PciI	ACATGT	1 cut(s)	457
PciSI	GCTCTTC	1 cut(s)	1702
PctI	GAATGC	2 cut(s)	181, 1989
PdmI	GAANNNNTTC	2 cut(s)	979, 2338
PfeI	GAWTC	6 cut(s)	353, 515, 554, 1703, 1718, 1963
PkrI	GCNGC	5 cut(s)	208, 230, 1569, 1630, 2008
PleI	GAGTC	6 cut(s)	66, 134, 257, 958, 1483, 2178
PpsI	GAGTC	6 cut(s)	66, 134, 257, 958, 1483, 2178
PscI	ACATGT	1 cut(s)	457
PsiI	TTATAA	1 cut(s)	531
Psp124BI	GAGCTC	1 cut(s)	1880
Psp6I	CCWGG	7 cut(s)	5, 1512, 1671, 1806, 1818, 1917, 2143
PspEI	GGTNACC	1 cut(s)	1901
PspGI	CCWGG	7 cut(s)	5, 1512, 1671, 1806, 1818, 1917, 2143
PspN4I	GGNNCC	6 cut(s)	1012, 1614, 2022, 2192, 2193, 2194
PspOMI	GGGCCC	1 cut(s)	2191
PspPI	GGNCC	2 cut(s)	2191, 2192
PsrI	GAACNNNNNNTAC	2 cut(s)	1876, 1908
PstI	CTGCAG	2 cut(s)	454, 1792
PstNI	CAGNNNCTG	2 cut(s)	1787, 2150
PsuI	RGATCY	3 cut(s)	641, 1783, 1937
RsaI	GTAC	7 cut(s)	327, 401, 1012, 1047, 1106, 1553, 1661
RsaNI	GTAC	7 cut(s)	326, 400, 1011, 1046, 1105, 1552, 1660
RseI	CAYNNNNRTG	1 cut(s)	788
SacI	GAGCTC	1 cut(s)	1880
SapI	GCTCTTC	1 cut(s)	1702
SatI	GCNGC	5 cut(s)	207, 229, 1568, 1629, 2007
Sau3AI	GATC	7 cut(s)	641, 710, 856, 1026, 1645, 1783, 1937
Sau96I	GGNCC	2 cut(s)	2191, 2192
SbfI	CCTGCAGG	1 cut(s)	1792
ScaI	AGTACT	2 cut(s)	401, 1661
SchI	GAGTC	6 cut(s)	66, 134, 257, 959, 1483, 2179
ScrFI	CCNGG	8 cut(s)	7, 1514, 1673, 1734, 1808, 1820, 1919, 2145
SdaI	CCTGCAGG	1 cut(s)	1792
SduI	GDGCHC	4 cut(s)	1040, 1831, 1880, 2195
SfaNI	GCATC	5 cut(s)	242, 1387, 1537, 1915, 2293
SfcI	CTRYAG	2 cut(s)	450, 1788
SmiMI	CAYNNNNRTG	1 cut(s)	788
SmlI	CTYRAG	2 cut(s)	1655, 2230
SmoI	CTYRAG	2 cut(s)	1655, 2230
SpeI	ACTAGT	1 cut(s)	2014
Sse8387I	CCTGCAGG	1 cut(s)	1792
SsiI	CCGC	2 cut(s)	246, 275
SspMI	CTAG	8 cut(s)	725, 1440, 1745, 1802, 1881, 1941, 2015, 2039
SstI	GAGCTC	1 cut(s)	1880
StyD4I	CCNGG	8 cut(s)	5, 1512, 1671, 1732, 1806, 1818, 1917, 2143
StyI	CCWWGG	2 cut(s)	645, 759
TaaI	ACNGT	3 cut(s)	657, 774, 2054
TaiI	ACGT	1 cut(s)	1843
TaqI	TCGA	3 cut(s)	396, 518, 2035
TatI	WGTACW	3 cut(s)	325, 399, 1659
TfiI	GAWTC	6 cut(s)	353, 515, 554, 1703, 1718, 1963
TscAI	CASTG	4 cut(s)	662, 669, 1475, 1744
TseFI	GTSAC	6 cut(s)	260, 506, 569, 768, 781, 1901
TseI	GCWGC	5 cut(s)	206, 228, 1567, 1628, 2006
Tsp45I	GTSAC	6 cut(s)	260, 506, 569, 768, 781, 1901
TspGWI	ACGGA	2 cut(s)	971, 2328
TspRI	CASTG	4 cut(s)	662, 669, 1475, 1744
VneI	GTGCAC	1 cut(s)	1827
XagI	CCTNNNNNAGG	1 cut(s)	1018
XapI	RAATTY	6 cut(s)	545, 695, 728, 1219, 1257, 2317
XceI	RCATGY	2 cut(s)	461, 622
XmiI	GTMKAC	2 cut(s)	462, 1447
XmnI	GAANNNNTTC	2 cut(s)	979, 2338
XspI	CTAG	8 cut(s)	725, 1440, 1745, 1802, 1881, 1941, 2015, 2039
ZrmI	AGTACT	2 cut(s)	401, 1661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.