FvH4_2g15490

Belongs to the ubiquitin-conjugating enzyme family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
13613894 .. 13626989
13096 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g15490.t5

Sequence Viewer

Length: 3342 bp
ATGGGAAGCAAGCAGCATGACAGTGTTTTTAAAGATGAGGAAACTACTGCTGTAGACCTTGATAATAGTTCTGTGGGAAAGGTTGTTTCTGATTCAAATGTGAATAATGAATTTAAAAAGTTGAGTGAGGTTGTCAGTGGCACGAATAATACTCCATGCATATATAGACAAGATGTTGTGAGGAGCAAGAGCGATATGATTGGGATTGTGACTGAAGTTGCTGGTGATACGGATTCTGATAGCGGCATGACTGATGATGAGGATGAGGATGATGATGAAGACGATGATGATGACGAGGACGAAGATGACAATGGTGAGAATCATGAAAATGAGAAAGATGGTGGTGATGACAAGAACCAAAATGGTGGTAATGATAAGACTGGTCCTCTTCCTGCTGACCAAGTTCGAGTACTTTGGATAGATGAAACTGAGTCAACCCAGAATATCAATGATGTAACAGTTGTTGATCGGGGATTCTTGCATGGAGATTTTGTTGCTGCTGCTTCTGAGCCAACTGGGCAAGTTGGTGTCGTGGTAGATGTCAATATCGCTGTTGATCTGAAAGCTCCTGATGGGTCCATCATAAAAGATGTGCCATCCAATGACTTAAAACGTGTGAGGGAGTTCACTGTTGGAGATTATGTGGTCCTTGGTACCTGGCTGGGTAGAATTGAGGATGTTTTTGATAACGTGACAGTGATGATTGATGATGGTTCCCTATGCAGAATTTTGAGAGCAGATCCGATGGATCTTAAACCACTTTCGAAAAATTTGCTTGAAGATGTGCATTTCCCTTATTACCCAGGTCAGCGTGTGAAGGCAAGGTCATCATCAGTTTTCAAGAATTCTTTGTGGTTATCTGGCTCATGGAAGCCTAATCGTCTGGAAGGTACTGTTACTAAAGTTACAGTAGGATCAGTGTTTATTTATTGGATAGCTTCTGCTGGCTGTGGGCCAGATTCTTCTACTGCCCCTGCTAAAGAGCAGGTCCCCAGGAAGTTGAAACTACTGTCTTGTTTTACACATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTTCCTTCATCAGCGTCGTTATCTTCCATAGCCATAGATAAGGGGTCAAAATTAGAACTCGTTTGTGATTCGGAAGAGAGTTCACTAGAAGAACCAAGTGGAAATAGTGCATCCATGGATACCGATCCAGTATCTGTATTAGATGGAAACAATGGAAATGCTGGAAGTAATACTTCTATTGAATCTAGTTCCAGCGGTAGTTCCTTGTTAGTCACAAAGGTGCCTGTTTCTCTTCATCGCAAAAAGCTGCGTAAACCTGTGGTTAAAAGAGACAAGAAGGCACGAAAGGAGGAAAATTTTGAAAGATCCTTTTTAATTGCCAATACCAGGACAACAGTTGATGTGGCTTGGCAGGATGGTTCAATAGAACGGAAGCTGGCTTCAACCAATTTAATTCCTCTTGATAGTCCTGGTGATCATGAATTTGTTGCTGAACAATATGTGGTGGAGAAGGCATCAGATGATGATGACGATGCTTTTGAAGCTAGACGTGTTGGGCTTGTGAAAAGTGTCAATGCCAAGGAGCGAACAGCATGTGTCAAGTGGTTGAAGGCAGTTTCCAGGGCTGAAGATCCTAGAGAATTTGACAAAGAAGAAGTTGTTAGCGTATATGAGCTTGAGGGTCACCCAGATTATGATTACTGTTATGGGGATGTTGTTGTCAGATTGTTGCCAGTTTCTGCTTCTGCACAAACTACTTCAGTATCAGACTTACTTGAGGAGCCAAAGCAGGAAAATCAACCAAGTGAGCTTACATCGGAAGCTGTCGATGAAGCTTCTTCTGTTGATAAATCTTGTATGGACTTCTCAGATCTTTCATGGGTTGGGAATATAACTGGTCTTAAGAACGGTGACATTGAAGTTACATGGGCAGACGGGATGGTTTCCACGGTTGGACCTCAAGCAATTTATGTTGTTGGTCGAGCTGATGACGATGACTCAATTGCTGGTAGTGAGGTTAGTGATGCTGGGAGTTGGGAAACAGTTGATGATGACCAGGTGCATGCCCTGTTTCCACTCGAGAGTATAACAGAGGAAGTGGAGATGCAGAGTGCCTTCAACGTGAATTCTGAAGCAGAGGAGGGTGGAGAAGATAATTCTGGAAGGAACCCAGCATTGTCTGTTCCCTTGGCTGCACTTCGCTATGTTACCAGACTAGCAAGTGGAATATTTGCACGGGGACAAAAGAACTTGGATCCAATTTGTTTAGATACTAAAGGTGAAGGTGATTTTGAGCCTCGGGAAGTTGAAATTTTTCAGGGAGATCAGGGTGAAGATTCCAGCTCTCAGAAATCTAAATTTGTTGATAGTAGCATGGAGACCAATCATAAAAATGAAGAGTGTGTGTCCTTGGAGACAACACAAATATTGGATGCTGCAGAAATCTTGTGCAACTTAAGGACTGAAGAGTCGGATGCTAAAAAATGTAGCAAGGATGATGTTTGCAGTTTCAAACGCTTTGATATAGCCAGAGATCCTTTGGACCATCATTATCTTGGTGCAGCAGGGCAGAATAGCAGTAGTAAAAAGTGGTTCAAGAAGATTCAGCAAGATTGGAGCATCCTTCAAAATAACCTGCCTGTTGGCATCTACGTACGCGTTTATGAAGATCGAATGGACCTCTTGAGGGCAGTTATAGTTGGGGCTTATGGGACACCTTACCAAGACGGCCTCTTCTTTTTCGATTTTCACCTCCCTCCCGAGTATCCTGATGTCCCTCCGTCAGCGTATTATCATTCTGGTGGCTGGCGGATAAATCCAAATCTATACGAAGAAGGCAAGGTCTGTCTTAGTCTGTTAAATACTTGGACTGGCAGAGGAAATGAAGTATGGGATCCAAAGTCTTCTAGCATCCTTCAAGTTCTAGTTTCACTCCAGGGATTGGTGCTAAATTCTAAGCCCTATTTCAACGAAGCTGGCTATGATAAGCAAATTGGAACAGCTGAAGGGGAGAAAAATTCATTGTCATACAATGAGAATACTTTCTTGCTGAATTGCAAGACGATAATGTCTCTTATGCGGAGGCCTCCCAAGGACTTTGAAGAGCTTGTCAAAGATCATTTCAGGAGGCGTGGCTATTACATCCTCAAGGCTTGTGATGCATATATGAAAGGCTACTTGATAGGTTCGCTCACTGAAGATGCCTCTGTTAGTGATAGCAGTAATGCAAATTCGACCTCTGTTGGTTTCAAGTTGATGTTAGCTAAGATTGTGCCAAAGCTGTTCTTGGCTTTGAGTGAGGTTGGAGCTGATTGTCATGAATTTAAGCATCTGCAACAGTCATAG

Protein Analysis

1114

Amino Acids

122.62

Weight (kDa)

4.53

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3-A_UBE2O PF23048 54 - 155 2.9e-11 UBE2O, N-terminal SH3-A domain
tSH3-B_UBE2O PF23046 211 - 342 6e-43 UBE2O, tandem tSH3-B domain
SH3-B_UBE2O PF23043 491 - 563 1.1e-20 UBE2O, SH3-B domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 2464, 3064
Acc36I ACCTGC 2 cut(s) 976, 2640
Acc65I GGTACC 1 cut(s) 653
AccB1I GGYRCC 2 cut(s) 653, 1276
AccB7I CCANNNNNTGG 1 cut(s) 2938
AccI GTMKAC 1 cut(s) 54
AccII CGCG 1 cut(s) 2655
AciI CCGC 4 cut(s) 243, 1251, 2806, 3076
AcuI CTGAAG 7 cut(s) 234, 1644, 1740, 2148, 2481, 3021, 3213
AfaI GTAC 4 cut(s) 411, 655, 892, 2652
AfiI CCNNNNNNNGG 3 cut(s) 1383, 2683, 2938
AflII CTTAAG 2 cut(s) 1898, 2452
AflIII ACRYGT 3 cut(s) 613, 1546, 2653
AjiI CACGTC 1 cut(s) 1547
AjnI CCWGG 8 cut(s) 656, 802, 992, 1382, 1465, 1616, 2052, 2931
AleI CACNNNNGTG 1 cut(s) 1274
Alw26I GTCTC 5 cut(s) 1058, 1320, 2369, 2405, 3072
AlwNI CAGNNNCTG 2 cut(s) 1190, 1736
Ama87I CYCGRG 3 cut(s) 2075, 2295, 2756
AoxI GGCC 3 cut(s) 953, 2725, 3080
ApeKI GCWGC 7 cut(s) 13, 497, 500, 1303, 2189, 2432, 2558
ArsI GACNNNNNNTTYG 2 cut(s) 1517, 1549
Asp700I GAANNNNTTC 2 cut(s) 2310, 3038
Asp718I GGTACC 1 cut(s) 653
AspS9I GGNCC 8 cut(s) 383, 576, 646, 953, 988, 1952, 2539, 2674
AsuII TTCGAA 1 cut(s) 764
AvaI CYCGRG 3 cut(s) 2075, 2295, 2756
AvaII GGWCC 7 cut(s) 383, 576, 646, 988, 1952, 2539, 2674
BaeI ACNNNNGTAYC 2 cut(s) 1743, 1776
BamHI GGATCC 2 cut(s) 2251, 2890
BanI GGYRCC 2 cut(s) 653, 1276
BbsI GAAGAC 2 cut(s) 285, 2892
BbvI GCAGC 7 cut(s) 25, 484, 487, 1290, 2176, 2419, 2570
BceAI ACGGC 1 cut(s) 2740
BcgI CGANNNNNNTGC 2 cut(s) 754, 788
BciT130I CCWGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
BciVI GTATCC 2 cut(s) 1168, 2772
BclI TGATCA 1 cut(s) 1471
BcoDI GTCTC 5 cut(s) 1058, 1320, 2369, 2405, 3072
BfaI CTAG 7 cut(s) 1142, 1242, 1542, 1632, 2213, 2904, 2921
BfmI CTRYAG 2 cut(s) 51, 2433
BfrI CTTAAG 2 cut(s) 1898, 2452
BfuAI ACCTGC 2 cut(s) 976, 2640
BfuI GTATCC 2 cut(s) 1168, 2772
BglI GCCNNNNNGGC 1 cut(s) 517
BglII AGATCT 1 cut(s) 1867
BisI GCNGC 8 cut(s) 14, 244, 498, 501, 1304, 2190, 2433, 2559
BlsI GCNGC 8 cut(s) 15, 245, 499, 502, 1305, 2191, 2434, 2560
BmcAI AGTACT 1 cut(s) 411
Bme1390I CCNGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
Bme18I GGWCC 7 cut(s) 383, 576, 646, 988, 1952, 2539, 2674
BmeT110I CYCGRG 3 cut(s) 2075, 2295, 2756
BmgBI CACGTC 1 cut(s) 1547
BmgT120I GGNCC 8 cut(s) 383, 576, 646, 953, 988, 1952, 2539, 2674
BmiI GGNNCC 9 cut(s) 577, 655, 715, 990, 1278, 1779, 2165, 2253, 2892
BmrFI CCNGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
BmrI ACTGGG 1 cut(s) 525
BmuI ACTGGG 1 cut(s) 525
BoxI GACNNNNGTC 1 cut(s) 1050
BpiI GAAGAC 2 cut(s) 285, 2892
BpmI CTGGAG 1 cut(s) 2915
Bpu14I TTCGAA 1 cut(s) 764
BpuEI CTTGAG 5 cut(s) 1694, 1793, 1941, 2701, 3128
BsaAI YACGTR 1 cut(s) 2650
BsaBI GATNNNNATC 1 cut(s) 1179
BsaI GGTCTC 1 cut(s) 2369
BsaXI ACNNNNNCTCC 4 cut(s) 477, 507, 627, 657
Bsc4I CCNNNNNNNGG 3 cut(s) 1383, 2683, 2938
Bse1I ACTGG 7 cut(s) 385, 520, 1052, 1184, 1730, 1897, 2872
Bse8I GATNNNNATC 1 cut(s) 1179
BseBI CCWGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
BseJI GATNNNNATC 1 cut(s) 1179
BseLI CCNNNNNNNGG 3 cut(s) 1383, 2683, 2938
BseMII CTCAG 4 cut(s) 420, 498, 1878, 2357
BseNI ACTGG 7 cut(s) 385, 520, 1052, 1184, 1730, 1897, 2872
BseRI GAGGAG 3 cut(s) 196, 1790, 2150
BseXI GCAGC 7 cut(s) 25, 484, 487, 1290, 2176, 2419, 2570
BseYI CCCAGC 3 cut(s) 661, 2024, 2167
BsgI GTGCAG 3 cut(s) 1728, 2175, 2577
Bsh1236I CGCG 1 cut(s) 2655
BshFI GGCC 3 cut(s) 955, 2727, 3082
BshNI GGYRCC 2 cut(s) 653, 1276
BsiHKCI CYCGRG 3 cut(s) 2075, 2295, 2756
BsiWI CGTACG 1 cut(s) 2650
BslFI GGGAC 4 cut(s) 974, 2250, 2722, 2756
BslI CCNNNNNNNGG 3 cut(s) 1383, 2683, 2938
BsmAI GTCTC 5 cut(s) 1058, 1320, 2369, 2405, 3072
BsmFI GGGAC 4 cut(s) 974, 2250, 2722, 2756
BsnI GGCC 3 cut(s) 955, 2727, 3082
Bso31I GGTCTC 1 cut(s) 2369
BsoBI CYCGRG 3 cut(s) 2075, 2295, 2756
Bsp119I TTCGAA 1 cut(s) 764
Bsp19I CCATGG 1 cut(s) 1170
BspACI CCGC 4 cut(s) 243, 1251, 2806, 3076
BspANI GGCC 3 cut(s) 955, 2727, 3082
BspCNI CTCAG 4 cut(s) 421, 499, 1877, 2356
BspFNI CGCG 1 cut(s) 2655
BspHI TCATGA 3 cut(s) 322, 1474, 3313
BspLI GGNNCC 9 cut(s) 577, 655, 715, 990, 1278, 1779, 2165, 2253, 2892
BspMAI CTGCAG 1 cut(s) 2437
BspMI ACCTGC 2 cut(s) 976, 2640
BspQI GCTCTTC 1 cut(s) 3093
BspT104I TTCGAA 1 cut(s) 764
BspT107I GGYRCC 2 cut(s) 653, 1276
BspTI CTTAAG 2 cut(s) 1898, 2452
BspTNI GGTCTC 1 cut(s) 2369
BsrI ACTGG 7 cut(s) 385, 520, 1052, 1184, 1730, 1897, 2872
BssT1I CCWWGG 6 cut(s) 649, 1170, 1575, 2184, 2406, 3087
Bst2UI CCWGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
Bst6I CTCTTC 7 cut(s) 393, 1125, 1293, 2388, 2457, 2735, 3093
BstAFI CTTAAG 2 cut(s) 1898, 2452
BstBAI YACGTR 1 cut(s) 2650
BstBI TTCGAA 1 cut(s) 764
BstC8I GCNNGC 6 cut(s) 11, 946, 1434, 2061, 2804, 2974
BstDEI CTNAG 7 cut(s) 429, 507, 1864, 2343, 2846, 2952, 3261
BstDSI CCRYGG 2 cut(s) 1170, 1944
BstEII GGTNACC 1 cut(s) 1679
BstFNI CGCG 1 cut(s) 2655
BstMAI GTCTC 5 cut(s) 1058, 1320, 2369, 2405, 3072
BstMWI GCNNNNNNNGC 3 cut(s) 517, 1538, 3155
BstNI CCWGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
BstNSI RCATGY 3 cut(s) 1028, 1593, 2063
BstPAI GACNNNNGTC 1 cut(s) 1050
BstPI GGTNACC 1 cut(s) 1679
BstSCI CCNGG 8 cut(s) 656, 802, 992, 1382, 1465, 1616, 2052, 2931
BstSFI CTRYAG 2 cut(s) 51, 2433
BstSNI TACGTA 1 cut(s) 2650
BstUI CGCG 1 cut(s) 2655
BstV1I GCAGC 7 cut(s) 25, 484, 487, 1290, 2176, 2419, 2570
BstV2I GAAGAC 2 cut(s) 285, 2892
BstX2I RGATCY 8 cut(s) 739, 748, 1361, 1627, 1867, 2251, 2530, 2890
BstXI CCANNNNNNTGG 1 cut(s) 365
BstYI RGATCY 8 cut(s) 739, 748, 1361, 1627, 1867, 2251, 2530, 2890
BsuI GTATCC 2 cut(s) 1168, 2772
BsuRI GGCC 3 cut(s) 955, 2727, 3082
BtgI CCRYGG 2 cut(s) 1170, 1944
BtgZI GCGATG 1 cut(s) 1277
BtrI CACGTC 1 cut(s) 1547
BtsIMutI CAGTG 6 cut(s) 28, 142, 627, 702, 924, 3189
BveI ACCTGC 2 cut(s) 976, 2640
Cac8I GCNNGC 6 cut(s) 11, 946, 1434, 2061, 2804, 2974
CaiI CAGNNNCTG 2 cut(s) 1190, 1736
CciI TCATGA 3 cut(s) 322, 1474, 3313
Cfr13I GGNCC 8 cut(s) 383, 576, 646, 953, 988, 1952, 2539, 2674
CseI GACGC 1 cut(s) 1059
CsiI ACCWGGT 1 cut(s) 2052
Csp6I GTAC 4 cut(s) 410, 654, 891, 2651
CviQI GTAC 4 cut(s) 410, 654, 891, 2651
DdeI CTNAG 7 cut(s) 429, 507, 1864, 2343, 2846, 2952, 3261
DraI TTTAAA 2 cut(s) 31, 115
DrdI GACNNNNNNGTC 2 cut(s) 2464, 3064
DseDI GACNNNNNNGTC 2 cut(s) 2464, 3064
Eam1104I CTCTTC 7 cut(s) 393, 1125, 1293, 2388, 2457, 2735, 3093
EarI CTCTTC 7 cut(s) 393, 1125, 1293, 2388, 2457, 2735, 3093
EciI GGCGGA 1 cut(s) 2821
Eco105I TACGTA 1 cut(s) 2650
Eco130I CCWWGG 6 cut(s) 649, 1170, 1575, 2184, 2406, 3087
Eco147I AGGCCT 1 cut(s) 3082
Eco31I GGTCTC 1 cut(s) 2369
Eco47I GGWCC 7 cut(s) 383, 576, 646, 988, 1952, 2539, 2674
Eco57I CTGAAG 7 cut(s) 234, 1644, 1740, 2148, 2481, 3021, 3213
Eco88I CYCGRG 3 cut(s) 2075, 2295, 2756
Eco91I GGTNACC 1 cut(s) 1679
EcoO109I RGGNCCY 1 cut(s) 988
EcoO65I GGTNACC 1 cut(s) 1679
EcoRI GAATTC 2 cut(s) 844, 2122
EcoRII CCWGG 8 cut(s) 656, 802, 992, 1382, 1465, 1616, 2052, 2931
EcoT14I CCWWGG 6 cut(s) 649, 1170, 1575, 2184, 2406, 3087
EcoT22I ATGCAT 2 cut(s) 161, 3160
ErhI CCWWGG 6 cut(s) 649, 1170, 1575, 2184, 2406, 3087
FalI AAGNNNNNCTT 4 cut(s) 1213, 1245, 3266, 3298
FaqI GGGAC 4 cut(s) 974, 2250, 2722, 2756
FbaI TGATCA 1 cut(s) 1471
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 8 cut(s) 14, 244, 498, 501, 1304, 2190, 2433, 2559
Fsp4HI GCNGC 8 cut(s) 14, 244, 498, 501, 1304, 2190, 2433, 2559
FspBI CTAG 7 cut(s) 1142, 1242, 1542, 1632, 2213, 2904, 2921
GluI GCNGC 8 cut(s) 14, 244, 498, 501, 1304, 2190, 2433, 2559
GsaI CCCAGC 3 cut(s) 665, 2028, 2171
GsuI CTGGAG 1 cut(s) 2915
HaeIII GGCC 3 cut(s) 955, 2727, 3082
HgaI GACGC 1 cut(s) 1059
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HindIII AAGCTT 1 cut(s) 1830
Hpy166II GTNNAC 5 cut(s) 55, 435, 627, 1139, 1310
Hpy8I GTNNAC 5 cut(s) 55, 435, 627, 1139, 1310
Hpy99I CGWCG 1 cut(s) 1075
HpyCH4IV ACGT 5 cut(s) 613, 690, 1546, 2118, 2649
HpyF10VI GCNNNNNNNGC 3 cut(s) 517, 1538, 3155
HpyF3I CTNAG 7 cut(s) 429, 507, 1864, 2343, 2846, 2952, 3261
HpySE526I ACGT 5 cut(s) 613, 690, 1546, 2118, 2649
KpnI GGTACC 1 cut(s) 657
Ksp22I TGATCA 1 cut(s) 1471
LguI GCTCTTC 1 cut(s) 3093
LmnI GCTCC 6 cut(s) 183, 571, 1579, 1777, 2613, 3302
Lsp1109I GCAGC 7 cut(s) 25, 484, 487, 1290, 2176, 2419, 2570
MabI ACCWGGT 1 cut(s) 2052
MaeI CTAG 7 cut(s) 1142, 1242, 1542, 1632, 2213, 2904, 2921
MaeII ACGT 5 cut(s) 613, 690, 1546, 2118, 2649
MfeI CAATTG 2 cut(s) 1037, 1998
MflI RGATCY 8 cut(s) 739, 748, 1361, 1627, 1867, 2251, 2530, 2890
MluI ACGCGT 1 cut(s) 2653
MlyI GAGTC 3 cut(s) 440, 1988, 2474
MmeI TCCRAC 4 cut(s) 613, 1930, 2448, 3280
Mph1103I ATGCAT 2 cut(s) 161, 3160
MroXI GAANNNNTTC 2 cut(s) 2310, 3038
MslI CAYNNNNRTG 5 cut(s) 21, 327, 1274, 2388, 2796
MspA1I CMGCKG 2 cut(s) 1251, 2999
MspCI CTTAAG 2 cut(s) 1898, 2452
MspR9I CCNGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
MunI CAATTG 2 cut(s) 1037, 1998
MvaI CCWGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
MvnI CGCG 1 cut(s) 2655
MwoI GCNNNNNNNGC 3 cut(s) 517, 1538, 3155
NcoI CCATGG 1 cut(s) 1170
NlaIV GGNNCC 9 cut(s) 577, 655, 715, 990, 1278, 1779, 2165, 2253, 2892
NmuCI GTSAC 6 cut(s) 208, 691, 1043, 1267, 1679, 1907
NsiI ATGCAT 2 cut(s) 161, 3160
NspI RCATGY 3 cut(s) 1028, 1593, 2063
NspV TTCGAA 1 cut(s) 764
OliI CACNNNNGTG 1 cut(s) 1274
PaeI GCATGC 1 cut(s) 2063
PaeR7I CTCGAG 1 cut(s) 2075
PagI TCATGA 3 cut(s) 322, 1474, 3313
PceI AGGCCT 1 cut(s) 3082
PciSI GCTCTTC 1 cut(s) 3093
PdmI GAANNNNTTC 2 cut(s) 2310, 3038
PfeI GAWTC 9 cut(s) 92, 233, 319, 474, 959, 1124, 1238, 2333, 2599
Pfl23II CGTACG 1 cut(s) 2650
PflMI CCANNNNNTGG 1 cut(s) 2938
PkrI GCNGC 8 cut(s) 15, 245, 499, 502, 1305, 2191, 2434, 2560
PleI GAGTC 3 cut(s) 439, 1988, 2473
PpsI GAGTC 3 cut(s) 439, 1988, 2473
Ppu21I YACGTR 1 cut(s) 2650
PpuMI RGGWCCY 1 cut(s) 988
PshAI GACNNNNGTC 1 cut(s) 1050
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 8 cut(s) 656, 802, 992, 1382, 1465, 1616, 2052, 2931
PspEI GGTNACC 1 cut(s) 1679
PspFI CCCAGC 3 cut(s) 661, 2024, 2167
PspGI CCWGG 8 cut(s) 656, 802, 992, 1382, 1465, 1616, 2052, 2931
PspLI CGTACG 1 cut(s) 2650
PspN4I GGNNCC 9 cut(s) 577, 655, 715, 990, 1278, 1779, 2165, 2253, 2892
PspPI GGNCC 8 cut(s) 383, 576, 646, 953, 988, 1952, 2539, 2674
PspPPI RGGWCCY 1 cut(s) 988
PstI CTGCAG 1 cut(s) 2437
PstNI CAGNNNCTG 2 cut(s) 1190, 1736
PsuI RGATCY 8 cut(s) 739, 748, 1361, 1627, 1867, 2251, 2530, 2890
PvuII CAGCTG 1 cut(s) 2999
RsaI GTAC 4 cut(s) 411, 655, 892, 2652
RsaNI GTAC 4 cut(s) 410, 654, 891, 2651
RseI CAYNNNNRTG 5 cut(s) 21, 327, 1274, 2388, 2796
SapI GCTCTTC 1 cut(s) 3093
SatI GCNGC 8 cut(s) 14, 244, 498, 501, 1304, 2190, 2433, 2559
Sau96I GGNCC 8 cut(s) 383, 576, 646, 953, 988, 1952, 2539, 2674
ScaI AGTACT 1 cut(s) 411
SchI GAGTC 3 cut(s) 440, 1988, 2474
ScrFI CCNGG 8 cut(s) 658, 804, 994, 1384, 1467, 1618, 2054, 2933
SexAI ACCWGGT 1 cut(s) 2052
SfcI CTRYAG 2 cut(s) 51, 2433
Sfr274I CTCGAG 1 cut(s) 2075
SfuI TTCGAA 1 cut(s) 764
SinI GGWCC 7 cut(s) 383, 576, 646, 988, 1952, 2539, 2674
SlaI CTCGAG 1 cut(s) 2075
SmiMI CAYNNNNRTG 5 cut(s) 21, 327, 1274, 2388, 2796
SmlI CTYRAG 8 cut(s) 1673, 1772, 1898, 1956, 2075, 2452, 2680, 3143
SmoI CTYRAG 8 cut(s) 1673, 1772, 1898, 1956, 2075, 2452, 2680, 3143
SnaBI TACGTA 1 cut(s) 2650
SphI GCATGC 1 cut(s) 2063
SseBI AGGCCT 1 cut(s) 3082
SsiI CCGC 4 cut(s) 243, 1251, 2806, 3076
SspI AATATT 2 cut(s) 2226, 2424
SspMI CTAG 7 cut(s) 1142, 1242, 1542, 1632, 2213, 2904, 2921
StuI AGGCCT 1 cut(s) 3082
StyD4I CCNGG 8 cut(s) 656, 802, 992, 1382, 1465, 1616, 2052, 2931
StyI CCWWGG 6 cut(s) 649, 1170, 1575, 2184, 2406, 3087
TaiI ACGT 5 cut(s) 616, 693, 1549, 2121, 2652
TaqI TCGA 8 cut(s) 406, 764, 1824, 1978, 2076, 2668, 2739, 3230
TatI WGTACW 1 cut(s) 409
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 9 cut(s) 92, 233, 319, 474, 959, 1124, 1238, 2333, 2599
TscAI CASTG 6 cut(s) 28, 142, 634, 702, 924, 3196
TseFI GTSAC 6 cut(s) 208, 691, 1043, 1267, 1679, 1907
TseI GCWGC 7 cut(s) 13, 497, 500, 1303, 2189, 2432, 2558
Tsp45I GTSAC 6 cut(s) 208, 691, 1043, 1267, 1679, 1907
TspGWI ACGGA 3 cut(s) 245, 1441, 2766
TspRI CASTG 6 cut(s) 28, 142, 634, 702, 924, 3196
Van91I CCANNNNNTGG 1 cut(s) 2938
Vha464I CTTAAG 2 cut(s) 1898, 2452
VpaK11BI GGWCC 7 cut(s) 383, 576, 646, 988, 1952, 2539, 2674
XceI RCATGY 3 cut(s) 1028, 1593, 2063
XcmI CCANNNNNNNNNTGG 2 cut(s) 2533, 2549
XhoI CTCGAG 1 cut(s) 2075
XmiI GTMKAC 1 cut(s) 54
XmnI GAANNNNTTC 2 cut(s) 2310, 3038
XspI CTAG 7 cut(s) 1142, 1242, 1542, 1632, 2213, 2904, 2921
ZrmI AGTACT 1 cut(s) 411
Zsp2I ATGCAT 2 cut(s) 161, 3160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.