Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000258.1

Orthogroup ID

OG0005883

Physical Location & Seq

Genomic Coordinates Reverse (-)

22454 .. 31418

Gene Structure 8965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000258.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3828 bp

atggtggttgtgcaactcggatgtggccgaagaaggcaaatcagtcttgccagaaacccagattctggtgaaggtgcaaatgacatcgtccggcttcaggagttgccggaattggaggaagcaagatggaaaggactggtggctgtgtacggtggctgggctcgtgccaatcatcaattctctttgggtttgggtcgggtttgtgctgtggttcgagtagtggtggcggtattaagaatcgagcgtgacgaatataccccccttgtagctcctccgccctctcctgcattatattacaagacaaaccaaaacacctctgcgacttccctccctctcaaagaaccaagctttcttcttcttcttcttcctcttcttccttcacctaccgctccttctccatctccatctcttccaactccttcagattttggtatgggaagcaagcagcatgacagtgtttttaaagacgatgaacctactactgtagaccatgatgatagttctttgatccaggttgagttttcaactgattcaaatgtgaataatgaatttaaaaagttgagtgaggttgtcggtggcatgaataatgctccatacatatatagacaagatgttgtgaggagcaagaatggcatgattggggttgtgactgaagttgctggtgatttggattctgatagtggcatgtctgatgatgaggatgaggatgaggatgaaatagatgacgatgacgacgacgaccacaacagtgagaatcatgaaaatgacaaagatggtggtgatgacagtaatactaatgaaaatggtgacaagaaccagaatggtggtaatgataagactggtcctcttcctgcggaccaggttcgagtgctttggatagatgaaactgagtcaacccagaatatcaatgatataacagttgttgatcgaggattcttgcatggagattttgttgctgctgcttctaagccaaccgggcaagttggtgtcgtggtggatgtcaatatctctgttgatctgaaagctcctgacgggtccatcgtaaaagatgtgtcatccaatgacttaaaacgtgtgagggagttcactgttggtgattatgtggtccttggtacctggctgggtagaattgaggatgtttttgataatgtgacggtgatgattgatgatggttccctatgtagaattttgagagcagatccgatggatcttaaaccactttccaaaaatatgcttgaagatgtgcatttcccttattacccaggccagcgtgtgaaggcaaggtcatcatcggttttcaagaattctttgtggctatccggctcatggaaggctaatcgtctggaaggtactgttactaaagttacagtgggatcagtgtttatttattggatagcttctgctggctgtggcccagattcttcaactgcccctgctaaagagcaggtccccaggaagttgaaactattgtcttgtttcacacatgcaaattggcagttgggcgactggtgtctctttccatcatcagggtcgtcatcttccactgccgtagataagggttcaaaattagaacttcatcaattagattctactcaaatgggtaatgtgtgtgattcagaagagagttcactagaagaaccaaatggaaatagtgcatccatggatactgacccggtgtctgtattagatggaaacaatggaaatgctggaagtaatacttctattgaatctagttccagcggtagttcattgtcagtcacaaaggtgcctgtttctcttcatcgcaaaaagctgcgtaaacctgtggttaaaagagacaagaaggcacgaaaggaggaaaattttgaaagatcttttttgattgccaataccaggacaacagttgatgtggcatggcaggatggttcaacagaacggaagctggcttcaaccaatttaattcctctcgatagtcctggtgatcatgaatttgttgctgaacaatatgtggtggagaaggcatctgatgatggtgacaatgcttttgaagctaggcgtgttggactcgtgaaaagcgtcaatgccaaggagcgaacagcttgtgtacagtggttgaaggcagtttccagagctgaagatcctagagagtttgacaaggaggaagttgttagtgtatatgagcttgagggtcacccagattatgattactgttatggggatgttgttgtcagattgttgccagtttctgtttctgcacaaactgcttcggtatcggacttaattgaggagccaaagcagcaaaatcaaccaagtgagcttacatcagaagttgttgatgaagcttcttctgttgataaatcttgtatggacttctcagatctttcttgggttgggaatataactggtcttaagaatggtgatattgaagttacatgggctgacgggatggtttctacggttggacctcaagcaatttatgttgttggtcgagctgatgatgatgactcaattgctgggagcgaggttagtgatgctgctagttgggaaacagttgatgatgaggaggtgcatgccctatttcccctcgagagtataacagaggaagtggagatacagagtgcctttaacatgaattctgaagcagaggtgggtggagaagataattctggaaggaaccctgcattgtctgttcccttggctgcatttcgctttgttaccagactggcaagtggaatatttgctcggggacaaaagaacttggatccaattttagatactaaaggtgaaggtgattttgagcctcaggaagttgaaatctttcagggagatcattgtgaagattccagctctcagaaatctaaagttgttgatattagtgtggagaccaatcataaaaatgaagagcatgtttcctcggagacaacaaaaatattggatgcagcagaaatcttgtgcaacttaaggactgaaggattggatgctaaagaatgtagcaagggtgatgtttgcagtttcaaacgctttgatatagtcaaagatcctttggaccatcattatcttggtgcagcagggcaggatagcggtggtaagaagtggttcaagaagattcagcaagattggggcatccttcaaaataacctgcctgatggcatctacgtacgcgtttatgaagatcgaatggatctcttgagggcagttatagttggggcttatgggacaccttaccaagatggcctcttctttttcgattttcatctccctccggagtaccctgatgtccctccgtcagcatattatcattctggtggctggcggataaatccaaatctatacgaagaaggcaaagtctgtcttagtctgttaaatacttggactggtagaggaaatgaagtttgggatccaaagtcttctagcatccttcaagttctagtttcactccagggattggtgctaaattctaagccctatttcaacgaagctggctatgataagcaaattggaacagctgaaggggagaaaaattcgttgtcctacaatgagaatactttcttgctgaattgcaagacgataatgtctcttatgcggaggcctcccaaggactttgaagagcttgttcaagaccatttcaggaggcgtggtcattatatcctcaaggcttgcgatgcatatatgaaaggctacttgataggttcgctcactaaagatgcctctgttagtgatagcagtgatgcaaattcaacctctgttggtttcaagttgatgttagctaagattgtgccaaagctgttcttggctttgagtgaggttggagccgattgtcatgaatttaagcatctgcaacagtcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

1275

Amino Acids

140.01

Weight (kDa)

4.65

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16920 AT2G16920
fragaria_vesca	FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490
malus_domestica	MD05G1123200.v1.1 MD10G1126200.v1.1
prunus_persica	Prupe.8G167100_v2.0.a1 Prupe.8G167100_v2.0.a1 Prupe.8G167100_v2.0.a1
pyrus_communis	pycom05g11760 pycom10g10840
rosa_chinensis	RchiOBHm_Chr6g0278491
rosa_laevigata	RLG00000013224
rosa_multiflora	Rmu_sc0000258.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189850 Rroxscaffold_7G00190340
rosa_rugosa	Rorug06G0117200 Rorug06G0117200
rosa_samantha	Rh6AG226500 Rh6BG230700 Rh6CG233800 Rh6DG225100
rosa_wichuraiana	Rw6G019770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3550
Acc36I	ACCTGC	2 cut(s)	1435, 3126
Acc65I	GGTACC	1 cut(s)	1112
AccB1I	GGYRCC	2 cut(s)	1112, 1765
AccB7I	CCANNNNNTGG	2 cut(s)	65, 3424
AccBSI	CCGCTC	1 cut(s)	389
AccI	GTMKAC	1 cut(s)	486
AccII	CGCG	1 cut(s)	3141
AccIII	TCCGGA	1 cut(s)	3241
AciI	CCGC	8 cut(s)	227, 275, 387, 854, 1740, 3060, 3292, 3562
AcoI	YGGCCR	1 cut(s)	25
AcuI	CTGAAG	7 cut(s)	80, 405, 672, 2133, 2637, 2967, 3507
AfaI	GTAC	6 cut(s)	149, 1114, 1351, 2085, 3138, 3248
AfiI	CCNNNNNNNGG	6 cut(s)	65, 97, 1326, 1526, 1872, 3424
AflII	CTTAAG	2 cut(s)	2387, 2938
AflIII	ACRYGT	2 cut(s)	1072, 3139
AhdI	GACNNNNNGTC	1 cut(s)	1675
AjnI	CCWGG	8 cut(s)	510, 858, 1115, 1261, 1451, 1871, 1954, 3417
AjuI	GAANNNNNNNTTGG	4 cut(s)	161, 193, 3355, 3387
AleI	CACNNNNGTG	2 cut(s)	747, 1763
Alw26I	GTCTC	5 cut(s)	1517, 1809, 2855, 2891, 3558
AlwNI	CAGNNNCTG	2 cut(s)	65, 2225
Ama87I	CYCGRG	2 cut(s)	2564, 2721
Aor13HI	TCCGGA	1 cut(s)	3241
AoxI	GGCC	5 cut(s)	25, 1264, 1411, 3211, 3566
ApeKI	GCWGC	9 cut(s)	445, 956, 959, 1792, 2275, 2513, 2678, 2918, 3044
ArsI	GACNNNNNNTTYG	2 cut(s)	2006, 2038
Asp700I	GAANNNNTTC	3 cut(s)	2796, 3074, 3524
Asp718I	GGTACC	1 cut(s)	1112
AspS9I	GGNCC	8 cut(s)	842, 856, 1035, 1105, 1412, 1447, 2441, 3025
AsuC2I	CCSGG	2 cut(s)	976, 1673
AvaI	CYCGRG	2 cut(s)	2564, 2721
AvaII	GGWCC	7 cut(s)	842, 856, 1035, 1105, 1447, 2441, 3025
AxyI	CCTNAGG	1 cut(s)	2781
BamHI	GGATCC	2 cut(s)	2740, 3376
BanI	GGYRCC	2 cut(s)	1112, 1765
BanII	GRGCYC	1 cut(s)	163
BarI	GAAGNNNNNNTAC	2 cut(s)	2574, 2606
BauI	CACGAG	2 cut(s)	162, 2045
BbsI	GAAGAC	1 cut(s)	3378
BbvI	GCAGC	9 cut(s)	457, 943, 946, 1779, 2287, 2500, 2665, 2930, 3056
BceAI	ACGGC	1 cut(s)	1532
BciT130I	CCWGG	8 cut(s)	512, 860, 1117, 1263, 1453, 1873, 1956, 3419
BciVI	GTATCC	1 cut(s)	1657
BclI	TGATCA	1 cut(s)	1960
BcnI	CCSGG	2 cut(s)	976, 1673
BcoDI	GTCTC	5 cut(s)	1517, 1809, 2855, 2891, 3558
BfaI	CTAG	7 cut(s)	1631, 1731, 2031, 2121, 2517, 3390, 3407
BfmI	CTRYAG	1 cut(s)	483
BfrI	CTTAAG	2 cut(s)	2387, 2938
BfuAI	ACCTGC	2 cut(s)	1435, 3126
BfuI	GTATCC	1 cut(s)	1657
BglI	GCCNNNNNGGC	1 cut(s)	976
BglII	AGATCT	2 cut(s)	1850, 2356
BisI	GCNGC	9 cut(s)	446, 957, 960, 1793, 2276, 2514, 2679, 2919, 3045
BlsI	GCNGC	9 cut(s)	447, 958, 961, 1794, 2277, 2515, 2680, 2920, 3046
Bme18I	GGWCC	7 cut(s)	842, 856, 1035, 1105, 1447, 2441, 3025
BmeRI	GACNNNNNGTC	1 cut(s)	1675
BmeT110I	CYCGRG	2 cut(s)	2564, 2721
BmgT120I	GGNCC	8 cut(s)	842, 856, 1035, 1105, 1412, 1447, 2441, 3025
BoxI	GACNNNNGTC	1 cut(s)	1509
BpiI	GAAGAC	1 cut(s)	3378
BpmI	CTGGAG	1 cut(s)	3401
BpuEI	CTTGAG	4 cut(s)	2183, 2430, 3187, 3614
BpuMI	CCSGG	2 cut(s)	976, 1673
BsaAI	YACGTR	1 cut(s)	3136
BsaBI	GATNNNNATC	1 cut(s)	3231
BsaI	GGTCTC	1 cut(s)	2855
BsaJI	CCNNGG	9 cut(s)	1108, 1261, 1451, 1659, 2064, 2673, 2892, 3418, 3573
BsaWI	WCCGGW	1 cut(s)	3241
BsaXI	ACNNNNNCTCC	4 cut(s)	936, 966, 3601, 3631
Bsc4I	CCNNNNNNNGG	6 cut(s)	65, 97, 1326, 1526, 1872, 3424
Bse1I	ACTGG	7 cut(s)	141, 844, 1511, 2219, 2386, 2706, 3358
Bse21I	CCTNAGG	1 cut(s)	2781
Bse8I	GATNNNNATC	1 cut(s)	3231
BseAI	TCCGGA	1 cut(s)	3241
BseBI	CCWGG	8 cut(s)	512, 860, 1117, 1263, 1453, 1873, 1956, 3419
BseDI	CCNNGG	9 cut(s)	1108, 1261, 1451, 1659, 2064, 2673, 2892, 3418, 3573
BseJI	GATNNNNATC	1 cut(s)	3231
BseLI	CCNNNNNNNGG	6 cut(s)	65, 97, 1326, 1526, 1872, 3424
BseMII	CTCAG	4 cut(s)	879, 2367, 2795, 2843
BseNI	ACTGG	7 cut(s)	141, 844, 1511, 2219, 2386, 2706, 3358
BseRI	GAGGAG	4 cut(s)	261, 634, 2279, 2555
BseXI	GCAGC	9 cut(s)	457, 943, 946, 1779, 2287, 2500, 2665, 2930, 3056
BseYI	CCCAGC	3 cut(s)	156, 1120, 2492
BsgI	GTGCAG	2 cut(s)	2217, 3063
Bsh1236I	CGCG	1 cut(s)	3141
BshFI	GGCC	5 cut(s)	27, 1266, 1413, 3213, 3568
BshNI	GGYRCC	2 cut(s)	1112, 1765
BsiHKCI	CYCGRG	2 cut(s)	2564, 2721
BsiSI	CCGG	6 cut(s)	91, 107, 975, 1320, 1673, 3242
BsiWI	CGTACG	1 cut(s)	3136
BslFI	GGGAC	4 cut(s)	1433, 2739, 3208, 3242
BslI	CCNNNNNNNGG	6 cut(s)	65, 97, 1326, 1526, 1872, 3424
BsmAI	GTCTC	5 cut(s)	1517, 1809, 2855, 2891, 3558
BsmFI	GGGAC	4 cut(s)	1433, 2739, 3208, 3242
BsnI	GGCC	5 cut(s)	27, 1266, 1413, 3213, 3568
Bso31I	GGTCTC	1 cut(s)	2855
BsoBI	CYCGRG	2 cut(s)	2564, 2721
Bsp1286I	GDGCHC	1 cut(s)	163
Bsp13I	TCCGGA	1 cut(s)	3241
Bsp1407I	TGTACA	1 cut(s)	2083
Bsp19I	CCATGG	1 cut(s)	1659
BspACI	CCGC	8 cut(s)	227, 275, 387, 854, 1740, 3060, 3292, 3562
BspANI	GGCC	5 cut(s)	27, 1266, 1413, 3213, 3568
BspCNI	CTCAG	4 cut(s)	880, 2366, 2794, 2842
BspEI	TCCGGA	1 cut(s)	3241
BspFNI	CGCG	1 cut(s)	3141
BspHI	TCATGA	3 cut(s)	757, 1963, 3799
BspMI	ACCTGC	2 cut(s)	1435, 3126
BspQI	GCTCTTC	2 cut(s)	2874, 3579
BspT107I	GGYRCC	2 cut(s)	1112, 1765
BspTI	CTTAAG	2 cut(s)	2387, 2938
BspTNI	GGTCTC	1 cut(s)	2855
BsrBI	CCGCTC	1 cut(s)	389
BsrGI	TGTACA	1 cut(s)	2083
BsrI	ACTGG	7 cut(s)	141, 844, 1511, 2219, 2386, 2706, 3358
BssECI	CCNNGG	9 cut(s)	1108, 1261, 1451, 1659, 2064, 2673, 2892, 3418, 3573
BssSI	CACGAG	2 cut(s)	162, 2045
BssT1I	CCWWGG	5 cut(s)	1108, 1659, 2064, 2673, 3573
Bst2BI	CACGAG	2 cut(s)	162, 2045
Bst2UI	CCWGG	8 cut(s)	512, 860, 1117, 1263, 1453, 1873, 1956, 3419
Bst6I	CTCTTC	8 cut(s)	375, 414, 852, 1614, 1782, 2874, 3221, 3579
BstAFI	CTTAAG	2 cut(s)	2387, 2938
BstAPI	GCANNNNNTGC	1 cut(s)	2240
BstAUI	TGTACA	1 cut(s)	2083
BstBAI	YACGTR	1 cut(s)	3136
BstC8I	GCNNGC	8 cut(s)	443, 1268, 1405, 1923, 2550, 3290, 3460, 3637
BstDEI	CTNAG	8 cut(s)	888, 966, 2353, 2781, 2829, 3332, 3438, 3747
BstDSI	CCRYGG	1 cut(s)	1659
BstEII	GGTNACC	1 cut(s)	2168
BstFNI	CGCG	1 cut(s)	3141
BstMAI	GTCTC	5 cut(s)	1517, 1809, 2855, 2891, 3558
BstMWI	GCNNNNNNNGC	6 cut(s)	630, 976, 2027, 2240, 2275, 3641
BstNI	CCWGG	8 cut(s)	512, 860, 1117, 1263, 1453, 1873, 1956, 3419
BstNSI	RCATGY	4 cut(s)	688, 1487, 2552, 2888
BstPAI	GACNNNNGTC	1 cut(s)	1509
BstPI	GGTNACC	1 cut(s)	2168
BstSFI	CTRYAG	1 cut(s)	483
BstSNI	TACGTA	1 cut(s)	3136
BstUI	CGCG	1 cut(s)	3141
BstV1I	GCAGC	9 cut(s)	457, 943, 946, 1779, 2287, 2500, 2665, 2930, 3056
BstV2I	GAAGAC	1 cut(s)	3378
BstX2I	RGATCY	9 cut(s)	1198, 1207, 1850, 2116, 2356, 2740, 3016, 3160, 3376
BstXI	CCANNNNNNTGG	1 cut(s)	824
BstYI	RGATCY	9 cut(s)	1198, 1207, 1850, 2116, 2356, 2740, 3016, 3160, 3376
Bsu36I	CCTNAGG	1 cut(s)	2781
BsuI	GTATCC	1 cut(s)	1657
BsuRI	GGCC	5 cut(s)	27, 1266, 1413, 3213, 3568
BtgI	CCRYGG	1 cut(s)	1659
BtgZI	GCGATG	2 cut(s)	1766, 3654
BtsI	GCAGTG	2 cut(s)	1542, 3709
BtsIMutI	CAGTG	8 cut(s)	460, 754, 1086, 1374, 1383, 1542, 2093, 3709
BveI	ACCTGC	2 cut(s)	1435, 3126
Cac8I	GCNNGC	8 cut(s)	443, 1268, 1405, 1923, 2550, 3290, 3460, 3637
CaiI	CAGNNNCTG	2 cut(s)	65, 2225
CciI	TCATGA	3 cut(s)	757, 1963, 3799
Cfr13I	GGNCC	8 cut(s)	842, 856, 1035, 1105, 1412, 1447, 2441, 3025
CseI	GACGC	1 cut(s)	2044
CsiI	ACCWGGT	1 cut(s)	858
Csp6I	GTAC	6 cut(s)	148, 1113, 1350, 2084, 3137, 3247
CspCI	CAANNNNNGTGG	2 cut(s)	757, 792
CviQI	GTAC	6 cut(s)	148, 1113, 1350, 2084, 3137, 3247
DdeI	CTNAG	8 cut(s)	888, 966, 2353, 2781, 2829, 3332, 3438, 3747
DraI	TTTAAA	2 cut(s)	463, 553
DrdI	GACNNNNNNGTC	1 cut(s)	3550
DriI	GACNNNNNGTC	1 cut(s)	1675
DseDI	GACNNNNNNGTC	1 cut(s)	3550
EaeI	YGGCCR	1 cut(s)	25
Eam1104I	CTCTTC	8 cut(s)	375, 414, 852, 1614, 1782, 2874, 3221, 3579
Eam1105I	GACNNNNNGTC	1 cut(s)	1675
EarI	CTCTTC	8 cut(s)	375, 414, 852, 1614, 1782, 2874, 3221, 3579
EciI	GGCGGA	2 cut(s)	264, 3307
Eco105I	TACGTA	1 cut(s)	3136
Eco130I	CCWWGG	5 cut(s)	1108, 1659, 2064, 2673, 3573
Eco147I	AGGCCT	1 cut(s)	3568
Eco24I	GRGCYC	1 cut(s)	163
Eco31I	GGTCTC	1 cut(s)	2855
Eco47I	GGWCC	7 cut(s)	842, 856, 1035, 1105, 1447, 2441, 3025
Eco57I	CTGAAG	7 cut(s)	80, 405, 672, 2133, 2637, 2967, 3507
Eco81I	CCTNAGG	1 cut(s)	2781
Eco88I	CYCGRG	2 cut(s)	2564, 2721
Eco91I	GGTNACC	1 cut(s)	2168
EcoO109I	RGGNCCY	1 cut(s)	1447
EcoO65I	GGTNACC	1 cut(s)	2168
EcoRI	GAATTC	2 cut(s)	1303, 2611
EcoRII	CCWGG	8 cut(s)	510, 858, 1115, 1261, 1451, 1871, 1954, 3417
EcoT14I	CCWWGG	5 cut(s)	1108, 1659, 2064, 2673, 3573
EcoT22I	ATGCAT	1 cut(s)	3646
EcoT38I	GRGCYC	1 cut(s)	163
ErhI	CCWWGG	5 cut(s)	1108, 1659, 2064, 2673, 3573
FalI	AAGNNNNNCTT	6 cut(s)	1702, 1734, 3315, 3347, 3752, 3784
FaqI	GGGAC	4 cut(s)	1433, 2739, 3208, 3242
FbaI	TGATCA	1 cut(s)	1960
FblI	GTMKAC	1 cut(s)	486
Fnu4HI	GCNGC	9 cut(s)	446, 957, 960, 1793, 2276, 2514, 2679, 2919, 3045
FriOI	GRGCYC	1 cut(s)	163
Fsp4HI	GCNGC	9 cut(s)	446, 957, 960, 1793, 2276, 2514, 2679, 2919, 3045
FspBI	CTAG	7 cut(s)	1631, 1731, 2031, 2121, 2517, 3390, 3407
GluI	GCNGC	9 cut(s)	446, 957, 960, 1793, 2276, 2514, 2679, 2919, 3045
GsaI	CCCAGC	3 cut(s)	160, 1124, 2496
GsuI	CTGGAG	1 cut(s)	3401
HaeIII	GGCC	5 cut(s)	27, 1266, 1413, 3213, 3568
HapII	CCGG	6 cut(s)	91, 107, 975, 1320, 1673, 3242
HgaI	GACGC	1 cut(s)	2044
HincII	GTYRAC	1 cut(s)	894
HindII	GTYRAC	1 cut(s)	894
HindIII	AAGCTT	2 cut(s)	346, 2319
HpaII	CCGG	6 cut(s)	91, 107, 975, 1320, 1673, 3242
Hpy166II	GTNNAC	7 cut(s)	148, 487, 894, 1086, 1628, 1799, 2084
Hpy8I	GTNNAC	7 cut(s)	148, 487, 894, 1086, 1628, 1799, 2084
Hpy99I	CGWCG	2 cut(s)	737, 740
HpyCH4IV	ACGT	2 cut(s)	1072, 3135
HpyF10VI	GCNNNNNNNGC	6 cut(s)	630, 976, 2027, 2240, 2275, 3641
HpyF3I	CTNAG	8 cut(s)	888, 966, 2353, 2781, 2829, 3332, 3438, 3747
HpySE526I	ACGT	2 cut(s)	1072, 3135
Kpn2I	TCCGGA	1 cut(s)	3241
KpnI	GGTACC	1 cut(s)	1116
Ksp22I	TGATCA	1 cut(s)	1960
LguI	GCTCTTC	2 cut(s)	2874, 3579
LmnI	GCTCC	9 cut(s)	274, 394, 595, 621, 1030, 2068, 2266, 2496, 3788
Lsp1109I	GCAGC	9 cut(s)	457, 943, 946, 1779, 2287, 2500, 2665, 2930, 3056
MabI	ACCWGGT	1 cut(s)	858
MaeI	CTAG	7 cut(s)	1631, 1731, 2031, 2121, 2517, 3390, 3407
MaeII	ACGT	2 cut(s)	1072, 3135
MbiI	CCGCTC	1 cut(s)	389
MfeI	CAATTG	1 cut(s)	2487
MflI	RGATCY	9 cut(s)	1198, 1207, 1850, 2116, 2356, 2740, 3016, 3160, 3376
MhlI	GDGCHC	1 cut(s)	163
MluI	ACGCGT	1 cut(s)	3139
MlyI	GAGTC	3 cut(s)	899, 2037, 2477
MmeI	TCCRAC	4 cut(s)	437, 2020, 2419, 3766
Mph1103I	ATGCAT	1 cut(s)	3646
MroI	TCCGGA	1 cut(s)	3241
MroXI	GAANNNNTTC	3 cut(s)	2796, 3074, 3524
MslI	CAYNNNNRTG	6 cut(s)	453, 747, 762, 1763, 2874, 3282
MspA1I	CMGCKG	2 cut(s)	1740, 3485
MspCI	CTTAAG	2 cut(s)	2387, 2938
MspI	CCGG	6 cut(s)	91, 107, 975, 1320, 1673, 3242
MunI	CAATTG	1 cut(s)	2487
MvaI	CCWGG	8 cut(s)	512, 860, 1117, 1263, 1453, 1873, 1956, 3419
MvnI	CGCG	1 cut(s)	3141
MwoI	GCNNNNNNNGC	6 cut(s)	630, 976, 2027, 2240, 2275, 3641
NciI	CCSGG	2 cut(s)	976, 1673
NcoI	CCATGG	1 cut(s)	1659
NmuCI	GTSAC	7 cut(s)	245, 646, 806, 1150, 1756, 2012, 2168
NsiI	ATGCAT	1 cut(s)	3646
NspI	RCATGY	4 cut(s)	688, 1487, 2552, 2888
OliI	CACNNNNGTG	2 cut(s)	747, 1763
PaeI	GCATGC	1 cut(s)	2552
PaeR7I	CTCGAG	1 cut(s)	2564
PagI	TCATGA	3 cut(s)	757, 1963, 3799
PceI	AGGCCT	1 cut(s)	3568
PciSI	GCTCTTC	2 cut(s)	2874, 3579
PcsI	WCGNNNNNNNCGW	4 cut(s)	246, 732, 1038, 2052
PdmI	GAANNNNTTC	3 cut(s)	2796, 3074, 3524
Pfl23II	CGTACG	1 cut(s)	3136
PflFI	GACNNNGTC	1 cut(s)	86
PflMI	CCANNNNNTGG	2 cut(s)	65, 3424
PkrI	GCNGC	9 cut(s)	447, 958, 961, 1794, 2277, 2515, 2680, 2920, 3046
PleI	GAGTC	3 cut(s)	898, 2037, 2477
PpsI	GAGTC	3 cut(s)	898, 2037, 2477
Ppu21I	YACGTR	1 cut(s)	3136
PpuMI	RGGWCCY	1 cut(s)	1447
PshAI	GACNNNNGTC	1 cut(s)	1509
Psp5II	RGGWCCY	1 cut(s)	1447
Psp6I	CCWGG	8 cut(s)	510, 858, 1115, 1261, 1451, 1871, 1954, 3417
PspEI	GGTNACC	1 cut(s)	2168
PspFI	CCCAGC	3 cut(s)	156, 1120, 2492
PspGI	CCWGG	8 cut(s)	510, 858, 1115, 1261, 1451, 1871, 1954, 3417
PspLI	CGTACG	1 cut(s)	3136
PspPI	GGNCC	8 cut(s)	842, 856, 1035, 1105, 1412, 1447, 2441, 3025
PspPPI	RGGWCCY	1 cut(s)	1447
PstNI	CAGNNNCTG	2 cut(s)	65, 2225
PsuI	RGATCY	9 cut(s)	1198, 1207, 1850, 2116, 2356, 2740, 3016, 3160, 3376
PsyI	GACNNNGTC	1 cut(s)	86
PvuII	CAGCTG	1 cut(s)	3485
RsaI	GTAC	6 cut(s)	149, 1114, 1351, 2085, 3138, 3248
RsaNI	GTAC	6 cut(s)	148, 1113, 1350, 2084, 3137, 3247
RseI	CAYNNNNRTG	6 cut(s)	453, 747, 762, 1763, 2874, 3282
SapI	GCTCTTC	2 cut(s)	2874, 3579
SatI	GCNGC	9 cut(s)	446, 957, 960, 1793, 2276, 2514, 2679, 2919, 3045
Sau96I	GGNCC	8 cut(s)	842, 856, 1035, 1105, 1412, 1447, 2441, 3025
SchI	GAGTC	3 cut(s)	899, 2037, 2477
SduI	GDGCHC	1 cut(s)	163
SexAI	ACCWGGT	1 cut(s)	858
SfcI	CTRYAG	1 cut(s)	483
Sfr274I	CTCGAG	1 cut(s)	2564
SinI	GGWCC	7 cut(s)	842, 856, 1035, 1105, 1447, 2441, 3025
SlaI	CTCGAG	1 cut(s)	2564
SmiMI	CAYNNNNRTG	6 cut(s)	453, 747, 762, 1763, 2874, 3282
SmlI	CTYRAG	7 cut(s)	2162, 2387, 2445, 2564, 2938, 3166, 3629
SmoI	CTYRAG	7 cut(s)	2162, 2387, 2445, 2564, 2938, 3166, 3629
SnaBI	TACGTA	1 cut(s)	3136
SphI	GCATGC	1 cut(s)	2552
SseBI	AGGCCT	1 cut(s)	3568
SsiI	CCGC	8 cut(s)	227, 275, 387, 854, 1740, 3060, 3292, 3562
SspI	AATATT	2 cut(s)	2715, 2910
SspMI	CTAG	7 cut(s)	1631, 1731, 2031, 2121, 2517, 3390, 3407
StuI	AGGCCT	1 cut(s)	3568
StyI	CCWWGG	5 cut(s)	1108, 1659, 2064, 2673, 3573
TaiI	ACGT	2 cut(s)	1075, 3138
TaqI	TCGA	9 cut(s)	214, 240, 865, 928, 1947, 2467, 2565, 3154, 3225
TatI	WGTACW	1 cut(s)	2083
TscAI	CASTG	8 cut(s)	460, 754, 1093, 1374, 1383, 1549, 2093, 3709
TseFI	GTSAC	7 cut(s)	245, 646, 806, 1150, 1756, 2012, 2168
TseI	GCWGC	9 cut(s)	445, 956, 959, 1792, 2275, 2513, 2678, 2918, 3044
Tsp45I	GTSAC	7 cut(s)	245, 646, 806, 1150, 1756, 2012, 2168
TspGWI	ACGGA	2 cut(s)	1930, 3252
TspRI	CASTG	8 cut(s)	460, 754, 1093, 1374, 1383, 1549, 2093, 3709
Tth111I	GACNNNGTC	1 cut(s)	86
Van91I	CCANNNNNTGG	2 cut(s)	65, 3424
Vha464I	CTTAAG	2 cut(s)	2387, 2938
VpaK11BI	GGWCC	7 cut(s)	842, 856, 1035, 1105, 1447, 2441, 3025
XceI	RCATGY	4 cut(s)	688, 1487, 2552, 2888
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3035
XhoI	CTCGAG	1 cut(s)	2564
XmiI	GTMKAC	1 cut(s)	486
XmnI	GAANNNNTTC	3 cut(s)	2796, 3074, 3524
XspI	CTAG	7 cut(s)	1631, 1731, 2031, 2121, 2517, 3390, 3407
Zsp2I	ATGCAT	1 cut(s)	3646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.